Pregenerated sensors for RPL5 (Homo sapiens)
Ensembl gene IDs: ENSG00000122406Ensembl transcript IDs: ENST00000461952.1, ENST00000497519.1, ENST00000646852.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AATTGTGCCAAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTaGTGCCAAACGTCGGTTTGTTCGGAACACGCTATGTCCCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: NCAKLLRSTAPDSNQ*CQTSVCSEHAMSHF Trigger: GAAGTGGGACATAGCGTGTTCCGAACAAACCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGCAAAAGTTTGGCACAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461952.1 |
||
| CDS GCA 90 bp | TATTTGTTTCTTCAAGGACCAGCACCGGTAATTGTGCCAAACTTTTaGGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: YLFLQGPAPVIVPNF*EALLQTAISDAKRR Trigger: CCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGCAAAAGTTTGGCACAATTACCGGTGCTGGTCCTTGAAGAAACAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461952.1 |
||
| CDS GCA 90 bp | GAAACAATTATCGCATCATATGCAACCAAAGGACCAACTACTGACTaGTCAGTTAGTGGGATATCATCATTCAGCAGCTCATCTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ETIIASYATKGPTTD*SVSGISSFSSSSLN Trigger: ATTCAGAGATGAGCTGCTGAATGATGATATCCCACTAACTGAGCAGTCAGTAGTTGGTCCTTTGGTTGCATATGATGCGATAATTGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497519.1 |
||
| CDS CAA 90 bp | GCGAAGCACTGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTaGTTCGGAACACGCTATGTCCCACTTCGAAAACCTAGCCTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AKHCSRQQSVMPNVG*FGTRYVPLRKPSLK Trigger: TTTGAGGCTAGGTTTTCGAAGTGGGACATAGCGTGTTCCGAACAAACCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461952.1 |
||
| CDS CAA 72 bp | TGCTCCAGACAGCAATCAGTGATGCCAAACGTCGGTTaGTTCGGAACACGCTATGTCCCACTTCGAAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: CSRQQSVMPNVG*FGTRYVPLRKP Trigger: AGGTTTTCGAAGTGGGACATAGCGTGTTCCGAACAAACCGACGTTTGGCATCACTGATTGCTGTCTGGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461952.1 |
||
| CDS TCA 72 bp | AAACTTTTGCGAAGCACTGCTCCAGACAGCAATCAGTaGTGCCAAACGTCGGTTTGTTCGGAACACGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: KLLRSTAPDSNQ*CQTSVCSEHAM Trigger: CATAGCGTGTTCCGAACAAACCGACGTTTGGCATCACTGATTGCTGTCTGGAGCAGTGCTTCGCAAAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461952.1 |
||
| CDS GCA 72 bp | CAAATTCAAGTTTACATACTGCTGGAACTCAACAGCTaGAGGTCGCTAGTGGCAAAACCACTGGACAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QIQVYILLELNS*RSLVAKPLDSK Trigger: TTTGCTGTCCAGTGGTTTTGCCACTAGCGACCTGCAGCTGTTGAGTTCCAGCAGTATGTAAACTTGAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646852.1 |
||
| CDS GCA 72 bp | ATCGCATCATATGCAACCAAAGGACCAACTACTGACTaGTCAGTTAGTGGGATATCATCATTCAGCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: IASYATKGPTTD*SVSGISSFSSS Trigger: TGAGCTGCTGAATGATGATATCCCACTAACTGAGCAGTCAGTAGTTGGTCCTTTGGTTGCATATGATGCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000497519.1 |
||
| CDS CCA 72 bp | TTTCAAAAGCCTAAATTACCTGCCACAAAGCTTAACTaGGCAAGAGCACATTCAGCAGTAATTCCCCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: FQKPKLPATKLN*ARAHSAVIPPL Trigger: TAGTGGGGGAATTACTGCTGAATGTGCTCTTGCCCAGTTAAGCTTTGTGGCAGGTAATTTAGGCTTTTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461952.1 |
||
| CDS CAA 72 bp | GCACAACTTAAGCTATCTTATCCATGTACAAACATCTaGCAGAAAACTCTCCAAGCAATCAGCCACAAACTA | + |
|
Preference number: 6 (lower is better) Translates to: AQLKLSYPCTNI*QKTLQAISHKL Trigger: TAGTTTGTGGCTGATTGCTTGGAGAGTTTTCTGCAAGATGTTTGTACATGGATAAGATAGCTTAAGTTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646852.1 |
||
| CDS CAA 72 bp | CTTTCAAAAGGTTTTAAACGCTTTCAATTTCCATATTaGTTTCTTCAAGGACCAGCACCGGTAATTGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSKGFKRFQFPY*FLQGPAPVIVP Trigger: TGGCACAATTACCGGTGCTGGTCCTTGAAGAAACAAATATGGAAATTGAAAGCGTTTAAAACCTTTTGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461952.1 |
||