Pregenerated sensors for RPL36A (Homo sapiens)
Ensembl gene IDs: ENSG00000241343Ensembl transcript IDs: ENST00000392994.7, ENST00000427805.6, ENST00000465340.5, ENST00000465744.5, ENST00000491851.5, ENST00000553110.8, ENST00000614077.4
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCATATTCACTATGAATGTGTTACTGACTTCTCCCTATTAGCCTaGAATGTGTCTACTCACATGATAACCAATAACCATTGCATAATG | + |
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Preference number: 1 (lower is better) Translates to: SHIHYECVTDFSLLA*NVSTHMITNNHCIM Trigger: CATTATGCAATGGTTATTGGTTATCATGTGAGTAGACACATTTCAGGCTAATAGGGAGAAGTCAGTAACACATTCATAGTGAATATGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| 3UTR-3UTR TCA 90 bp | AATAACCATTGCATAATGACAAACTGCCTCATAAGGCCCCTAGTGATTGAAGTGTTGCAACATATGATGTaGACTCAACCAGTCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: NNHCIMTNCLIRPLVIEVLQHMM*TQPVSF Trigger: GAAGCTGACTGGTTGAGTTCACATCATATGTTGCAA...CACTTCAATCACTAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| 3UTR-3UTR TCA 90 bp | CACATGATAACCAATAACCATTGCATAATGACAAACTGCCTCATAAGGCCCCTATTGCAACATATGATGTaGACTCAACCAGTCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: HMITNNHCIMTNCLIRPLLQHMM*TQPVSF Trigger: GAAGCTGACTGGTTGAGTTCACATCATATGTTGCAA...TAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATTGGTTATCATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| 3UTR-3UTR TCA 90 bp | CACATGATAACCAATAACCATTGCATAATGACAAACTGCCTCATAAGGCCCCTAGAAAATTGCAACATATaGTGTGAACTCAACCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: HMITNNHCIMTNCLIRPLENCNI*CELNQS Trigger: TGACTGGTTGAGTTCACATCATATGTTGCAATTTTC...TAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATTGGTTATCATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| 3UTR GCA 72 bp | CACATGATAACCAATAACCATTGCATAATGACAAACTaGCTCATAAGGCCCCTAGTGATTGAAGTGCCAAAT | + |
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Preference number: 3 (lower is better) Translates to: HMITNNHCIMTN*LIRPLVIEVPN Trigger: ATTTGGCACTTCAATCACTAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATTGGTTATCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | TTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTTCCCCACAAGCGGAGCGCCCTCGGGCGGCTaGGAGGACTCAGTTCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FNAKQVVPVRGINFPTSGAPSGG*EDSVRS Trigger: GCTCCGAACTGAGTCCTCTCAGCCGCCCGAGGGCGC...TCCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427805.6 |
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| CDS-3UTR CCA 90 bp | TTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTTCCCCACAAGCGGAGATCGCACTTCCTCATaGGAGTCGGTAGGAGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: FNAKQVVPVRGINFPTSGDRTSS*ESVGAI Trigger: GATTGCTCCTACCGACTCCCATGAGGAAGTGCGATC...TCCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000427805.6 ENST00000614077.4 |
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| CDS-3UTR CCA 90 bp | AACTCAACCAGTCAGCTTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAAGATCGCACTTCCTCATaGGAGTCGGTAGGAGCAATC | + |
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Preference number: 4 (lower is better) Translates to: NSTSQLQCKTSSTSKRHKDRTSS*ESVGAI Trigger: GATTGCTCCTACCGACTCCCATGAGGAAGTGCGATC...TTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAAGCTGACTGGTTGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000427805.6 ENST00000614077.4 |
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| CDS-3UTR GCA 90 bp | CTTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTTCCCCACAAGCGGTGCATAATGACAAACTaGCTCATAAGGCCCCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: LQCKTSSTSKRHKFPHKRCIMTN*LIRPLV Trigger: CACTAGGGGCCTTATGAGGCAGTTTGTCATTATGCA...CCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | CTTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTTCCCCACAAGCGGAAGGCCCCTAGTGATTaGAGTGCCAAATTAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LQCKTSSTSKRHKFPHKRKAPSD*SAKLEN Trigger: ATTTTCTAATTTGGCACTTCAATCACTAGGGGCCTT...CCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | TTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTTCCCCACAAGCGGATTCTCCCTATTAGCCTaGAATGTGTCTACTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: FNAKQVVPVRGINFPTSGFSLLA*NVSTHM Trigger: CATGTGAGTAGACACATTTCAGGCTAATAGGGAGAA...TCCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | AATAACCATTGCATAATGACAAACTGCCTCATAAGGCCCCTAGTGATTGAAGTGTTCTCCCTATTAGCCTaGAATGTGTCTACTCACATG | + |
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Preference number: 4 (lower is better) Translates to: NNHCIMTNCLIRPLVIEVFSLLA*NVSTHM Trigger: CATGTGAGTAGACACATTTCAGGCTAATAGGGAGAA...CACTTCAATCACTAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR GCA 90 bp | AACTCAACCAGTCAGCTTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATGCATAATGACAAACTaGCTCATAAGGCCCCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: NSTSQLQCKTSSTSKRHKCIMTN*LIRPLV Trigger: CACTAGGGGCCTTATGAGGCAGTTTGTCATTATGCA...TTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAAGCTGACTGGTTGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | AACTCAACCAGTCAGCTTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTGCAACATATGATGTaGACTCAACCAGTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: NSTSQLQCKTSSTSKRHKLQHMM*TQPVSF Trigger: GAAGCTGACTGGTTGAGTTCACATCATATGTTGCAA...TTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAAGCTGACTGGTTGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | AATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTTCCCCACAAGCGGAATTTTGCAACATATGATGTaGACTCAACCAGTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: NAKQVVPVRGINFPTSGILQHMM*TQPVSF Trigger: GAAGCTGACTGGTTGAGTTCACATCATATGTTGCAA...AATTCCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | ATGATAACCAATAACCATTGCATAATGACAAACTGCCTCATAAGGCCCCTAGTGAAGGCCCCTAGTGATTaGAGTGCCAAATTAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MITNNHCIMTNCLIRPLVKAPSD*SAKLEN Trigger: ATTTTCTAATTTGGCACTTCAATCACTAGGGGCCTT...CACTAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATTGGTTATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | AACTCAACCAGTCAGCTTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTCTCCCTATTAGCCTaGAATGTGTCTACTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: NSTSQLQCKTSSTSKRHKFSLLA*NVSTHM Trigger: CATGTGAGTAGACACATTTCAGGCTAATAGGGAGAA...TTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAAGCTGACTGGTTGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR GCA 90 bp | GCAAAACAAGTAGTACCAGTAAGAGGCATAAATTTCCCCACAAGCGGAATTGTAACCAGTCAGCTTCAATaGAAAACAAGTAGTACCAGT | + |
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Preference number: 4 (lower is better) Translates to: AKQVVPVRGINFPTSGIVTSQLQ*KTSSTS Trigger: ACTGGTACTACTTGTTTTGCATTGAAGCTGACTGGT...TACAATTCCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR GCA 90 bp | ATGATAACCAATAACCATTGCATAATGACAAACTGCCTCATAAGGCCCCTAGTGACCAGTCAGCTTCAATaGAAAACAAGTAGTACCAGT | + |
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Preference number: 4 (lower is better) Translates to: MITNNHCIMTNCLIRPLVTSQLQ*KTSSTS Trigger: ACTGGTACTACTTGTTTTGCATTGAAGCTGACTGGT...CACTAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATTGGTTATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | TTTAGCTATAGATCTAATATTTTTAGAGGATTACCCCTGAGCTCTATGCCACAATTAGAGGATTACCCCTaGGCTCTATGCCACAATGAA | + |
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Preference number: 4 (lower is better) Translates to: FSYRSNIFRGLPLSSMPQLEDYP*ALCHNE Trigger: TTCATTGTGGCATAGAGCTCAGGGGTAATCCTCTAA...TTGTGGCATAGAGCTCAGGGGTAATCCTCTAAAAATATTAGATCTATAGCTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392994.7 |
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| CDS-3UTR TCA 90 bp | AATAACCATTGCATAATGACAAACTGCCTCATAAGGCCCCTAGTGATTGAAGTGGAAAATTGCAACATATaGTGTGAACTCAACCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: NNHCIMTNCLIRPLVIEVENCNI*CELNQS Trigger: TGACTGGTTGAGTTCACATCATATGTTGCAATTTTC...CACTTCAATCACTAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | AATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTTCCCCACAAGCGGAATTAAGGCCCCTAGTGATTaGAGTGCCAAATTAGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: NAKQVVPVRGINFPTSGIKAPSD*SAKLEN Trigger: ATTTTCTAATTTGGCACTTCAATCACTAGGGGCCTT...AATTCCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR GCA 90 bp | TTTAGCTATAGATCTAATATTTTTAGAGGATTACCCCTGAGCTCTATGCCACAAACCATGCTGTTAAGCTaGCTCATTCTTCCTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: FSYRSNIFRGLPLSSMPQTMLLS*LILPFL Trigger: GAGGAAAGGAAGAATGAGGCAGCTTAACAGCATGGT...TTGTGGCATAGAGCTCAGGGGTAATCCTCTAAAAATATTAGATCTATAGCTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392994.7 |
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| CDS-3UTR GCA 90 bp | AATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTTCCCCACAAGCGGAATTACCAGTCAGCTTCAATaGAAAACAAGTAGTACCAGT | + |
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Preference number: 4 (lower is better) Translates to: NAKQVVPVRGINFPTSGITSQLQ*KTSSTS Trigger: ACTGGTACTACTTGTTTTGCATTGAAGCTGACTGGT...AATTCCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR GCA 90 bp | CTTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAATTTCCCCACAAGCGGATAACCAATAACCATTaGATAATGACAAACTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LQCKTSSTSKRHKFPHKRITNNH*IMTNCL Trigger: GAGGCAGTTTGTCATTATGCAATGGTTATTGGTTAT...CCGCTTGTGGGGAAATTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | AACTCAACCAGTCAGCTTCAATGCAAAACAAGTAGTACCAGTAAGAGGCATAAAGAAAATTGCAACATATaGTGTGAACTCAACCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: NSTSQLQCKTSSTSKRHKENCNI*CELNQS Trigger: TGACTGGTTGAGTTCACATCATATGTTGCAATTTTC...TTTATGCCTCTTACTGGTACTACTTGTTTTGCATTGAAGCTGACTGGTTGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR GCA 90 bp | CACATGATAACCAATAACCATTGCATAATGACAAACTGCCTCATAAGGCCCCTAATAACCAATAACCATTaGATAATGACAAACTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: HMITNNHCIMTNCLIRPLITNNH*IMTNCL Trigger: GAGGCAGTTTGTCATTATGCAATGGTTATTGGTTAT...TAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATTGGTTATCATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR GCA 90 bp | ATGATAACCAATAACCATTGCATAATGACAAACTGCCTCATAAGGCCCCTAGTGATAACCAATAACCATTaGATAATGACAAACTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: MITNNHCIMTNCLIRPLVITNNH*IMTNCL Trigger: GAGGCAGTTTGTCATTATGCAATGGTTATTGGTTAT...CACTAGGGGCCTTATGAGGCAGTTTGTCATTATGCAATGGTTATTGGTTATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427805.6 ENST00000553110.8 ENST00000614077.4 |
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| CDS-3UTR TCA 90 bp | TTTAGCTATAGATCTAATATTTTTAGAGGATTACCCCTGAGCTCTATGCCACAAAGCTCTATGCCACAATaGATAGATGTTCACCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: FSYRSNIFRGLPLSSMPQSSMPQ*IDVHLF Trigger: GAAAAGGTGAACATCTATTCATTGTGGCATAGAGCT...TTGTGGCATAGAGCTCAGGGGTAATCCTCTAAAAATATTAGATCTATAGCTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000392994.7 |
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| CDS-3UTR GCA 90 bp | TTTAGCTATAGATCTAATATTTTTAGAGGATTACCCCTGAGCTCTATGCCACAATTTGCCATGAACTACTaGCCCATTAAGAACATTATC | + |
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Preference number: 4 (lower is better) Translates to: FSYRSNIFRGLPLSSMPQFAMNY*PIKNII Trigger: GATAATGTTCTTAATGGGGCAGTAGTTCATGGCAAA...TTGTGGCATAGAGCTCAGGGGTAATCCTCTAAAAATATTAGATCTATAGCTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000392994.7 |
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| CDS GCA 90 bp | CCCCGTAGCCCGGTCCCTTTAGGGTTGATCCCGGCAAGATTGGGTTaGTCTGATATATCGAGTCCACACAGGAGCCTGGACCCATCCCGG | + |
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Preference number: 5 (lower is better) Translates to: PRSPVPLGLIPARLG*SDISSPHRSLDPSR Trigger: CCGGGATGGGTCCAGGCTCCTGTGTGGACTCGATATATCAGAGCAACCCAATCTTGCCGGGATCAACCCTAAAGGGACCGGGCTACGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS GCA 90 bp | CCTCATTACTTGCTACCTCTGACTACAGGGTGGGCCAGCCCCATGTaGTTCAAGCAGAGCTTCCTCCCTCCGTCGAGCCCCAAAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: PHYLLPLTTGWASPM*FKQSFLPPSSPKEG Trigger: TCCCTCTTTGGGGCTCGACGGAGGGAGGAAGCTCTGCTTGAAGCACATGGGGCTGGCCCACCCTGTAGTCAGAGGTAGCAAGTAATGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS CCA 90 bp | CACTCCAGGAGGACTCCTCATTACTTGCTACCTCTGACTACAGGGTaGGCCAGCCCCATGTGCTTCAAGCAGAGCTTCCTCCCTCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: HSRRTPHYLLPLTTG*ASPMCFKQSFLPPS Trigger: CGACGGAGGGAGGAAGCTCTGCTTGAAGCACATGGGGCTGGCCCACCCTGTAGTCAGAGGTAGCAAGTAATGAGGAGTCCTCCTGGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS GCA 90 bp | GATCCACCCGCCTCGGCTTTCCAAAGTGCTAGGCACAAGCCACCGTaGCTGGCCGCGTATAGGTACATTTTCTTTATCCATTCATCCCGA | + |
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Preference number: 5 (lower is better) Translates to: DPPASAFQSARHKPP*LAAYRYIFFIHSSR Trigger: TCGGGATGAATGGATAAAGAAAATGTACCTATACGCGGCCAGGCACGGTGGCTTGTGCCTAGCACTTTGGAAAGCCGAGGCGGGTGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CCA 90 bp | CACCCGCCTCGGCTTTCCAAAGTGCTAGGCACAAGCCACCGTGCCTaGCCGCGTATAGGTACATTTTCTTTATCCATTCATCCCGATGGA | + |
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Preference number: 5 (lower is better) Translates to: HPPRLSKVLGTSHRA*PRIGTFSLSIHPDG Trigger: TCCATCGGGATGAATGGATAAAGAAAATGTACCTATACGCGGCCAGGCACGGTGGCTTGTGCCTAGCACTTTGGAAAGCCGAGGCGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS TCA 90 bp | GACGTTAACCTAGTAAAGAAACAGTTCAGAACGTGCAATGTTATTTaGCCACAATGGCACAACGCCCTACCTTACCCAGCTAAAGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: DVNLVKKQFRTCNVI*PQWHNALPYPAKAE Trigger: CTCAGCTTTAGCTGGGTAAGGTAGGGCGTTGTGCCATTGTGGTCAAATAACATTGCACGTTCTGAACTGTTTCTTTACTAGGTTAACGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS GCA 90 bp | TGCACAAGAAGCAAAGTGCCAAAAGAAATGCTGTGTTGGAGAGAATaGTCCGTTCCAATCATCGTGCTAATTACTTTAAGAGTTAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: CTRSKVPKEMLCWRE*SVPIIVLITLRVSQ Trigger: TTGGCTAACTCTTAAAGTAATTAGCACGATGATTGGAACGGAGCATTCTCTCCAACACAGCATTTCTTTTGGCACTTTGCTTCTTGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CCA 90 bp | GAGCTAAACTGCACAAGAAGCAAAGTGCCAAAAGAAATGCTGTGTTaGAGAGAATGCTCCGTTCCAATCATCGTGCTAATTACTTTAAGA | + |
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Preference number: 5 (lower is better) Translates to: ELNCTRSKVPKEMLC*RECSVPIIVLITLR Trigger: TCTTAAAGTAATTAGCACGATGATTGGAACGGAGCATTCTCTCCAACACAGCATTTCTTTTGGCACTTTGCTTCTTGTGCAGTTTAGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS TCA 90 bp | ATTATAAACAGTGCTACAACAAACATAGGAGTGCAGATATCTCTTTaGTATACCGATTTTCTTCTGGGTATATACCCAGCAGTGGGATTG | + |
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Preference number: 5 (lower is better) Translates to: IINSATTNIGVQISL*YTDFLLGIYPAVGL Trigger: CAATCCCACTGCTGGGTATATACCCAGAAGAAAATCGGTATATCAAAGAGATATCTGCACTCCTATGTTTGTTGTAGCACTGTTTATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CAA 90 bp | TCCTGGCCCCGTAGCCCGGTCCCTTTAGGGTTGATCCCGGCAAGATaGGGTTGCTCTGATATATCGAGTCCACACAGGAGCCTGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: SWPRSPVPLGLIPAR*GCSDISSPHRSLDP Trigger: TGGGTCCAGGCTCCTGTGTGGACTCGATATATCAGAGCAACCCAATCTTGCCGGGATCAACCCTAAAGGGACCGGGCTACGGGGCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS TCA 72 bp | GGCACTCCAGGAGGACTCCTCATTACTTGCTACCTCTaGCTACAGGGTGGGCCAGCCCCATGTGCTTCAAGC | + |
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Preference number: 6 (lower is better) Translates to: GTPGGLLITCYL*LQGGPAPCASS Trigger: GCTTGAAGCACATGGGGCTGGCCCACCCTGTAGTCAGAGGTAGCAAGTAATGAGGAGTCCTCCTGGAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS CAA 72 bp | CTAAAGCTGAGGCACTCCAGGAGGACTCCTCATTACTaGCTACCTCTGACTACAGGGTGGGCCAGCCCCATG | + |
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Preference number: 6 (lower is better) Translates to: LKLRHSRRTPHY*LPLTTGWASPM Trigger: CATGGGGCTGGCCCACCCTGTAGTCAGAGGTAGCAAGTAATGAGGAGTCCTCCTGGAGTGCCTCAGCTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS CAA 90 bp | CTTACCCAGCTAAAGCTGAGGCACTCCAGGAGGACTCCTCATTACTaGCTACCTCTGACTACAGGGTGGGCCAGCCCCATGTGCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LTQLKLRHSRRTPHY*LPLTTGWASPMCFK Trigger: CTTGAAGCACATGGGGCTGGCCCACCCTGTAGTCAGAGGTAGCAAGTAATGAGGAGTCCTCCTGGAGTGCCTCAGCTTTAGCTGGGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS GCA 72 bp | CCGGTCCCTTTAGGGTTGATCCCGGCAAGATTGGGTTaGTCTGATATATCGAGTCCACACAGGAGCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: PVPLGLIPARLG*SDISSPHRSLD Trigger: GTCCAGGCTCCTGTGTGGACTCGATATATCAGAGCAACCCAATCTTGCCGGGATCAACCCTAAAGGGACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS CCA 72 bp | AGGACTCCTCATTACTTGCTACCTCTGACTACAGGGTaGGCCAGCCCCATGTGCTTCAAGCAGAGCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RTPHYLLPLTTG*ASPMCFKQSFL Trigger: GAGGAAGCTCTGCTTGAAGCACATGGGGCTGGCCCACCCTGTAGTCAGAGGTAGCAAGTAATGAGGAGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS CAA 72 bp | CGTAGCCCGGTCCCTTTAGGGTTGATCCCGGCAAGATaGGGTTGCTCTGATATATCGAGTCCACACAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RSPVPLGLIPAR*GCSDISSPHRS Trigger: GCTCCTGTGTGGACTCGATATATCAGAGCAACCCAATCTTGCCGGGATCAACCCTAAAGGGACCGGGCTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS CAA 90 bp | ACCCATCACTTCAATTCCTGGCCCCGTAGCCCGGTCCCTTTAGGGTaGATCCCGGCAAGATTGGGTTGCTCTGATATATCGAGTCCACAC | + |
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Preference number: 6 (lower is better) Translates to: THHFNSWPRSPVPLG*IPARLGCSDISSPH Trigger: GTGTGGACTCGATATATCAGAGCAACCCAATCTTGCCGGGATCAACCCTAAAGGGACCGGGCTACGGGGCCAGGAATTGAAGTGATGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS TCA 72 bp | CCCTTTAGGGTTGATCCCGGCAAGATTGGGTTGCTCTaGTATATCGAGTCCACACAGGAGCCTGGACCCATC | + |
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Preference number: 6 (lower is better) Translates to: PFRVDPGKIGLL*YIESTQEPGPI Trigger: GATGGGTCCAGGCTCCTGTGTGGACTCGATATATCAGAGCAACCCAATCTTGCCGGGATCAACCCTAAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS CAA 72 bp | TTCAATTCCTGGCCCCGTAGCCCGGTCCCTTTAGGGTaGATCCCGGCAAGATTGGGTTGCTCTGATATATCG | + |
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Preference number: 6 (lower is better) Translates to: FNSWPRSPVPLG*IPARLGCSDIS Trigger: CGATATATCAGAGCAACCCAATCTTGCCGGGATCAACCCTAAAGGGACCGGGCTACGGGGCCAGGAATTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465744.5 |
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| CDS CCA 72 bp | CGGCTTTCCAAAGTGCTAGGCACAAGCCACCGTGCCTaGCCGCGTATAGGTACATTTTCTTTATCCATTCAT | + |
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Preference number: 6 (lower is better) Translates to: RLSKVLGTSHRA*PRIGTFSLSIH Trigger: ATGAATGGATAAAGAAAATGTACCTATACGCGGCCAGGCACGGTGGCTTGTGCCTAGCACTTTGGAAAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CAA 72 bp | GCTTGCCCCTTTAGCCAGAGTTCTGCTGCTGCTAGTTaGCAGTTCTTAATAGGCCAAAACCTAGTTAGAACC | + |
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Preference number: 6 (lower is better) Translates to: ACPFSQSSAAAS*QFLIGQNLVRT Trigger: GGTTCTAACTAGGTTTTGGCCTATTAAGAACTGCAAACTAGCAGCAGCAGAACTCTGGCTAAAGGGGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CAA 90 bp | GGAGCTAAACTGCACAAGAAGCAAAGTGCCAAAAGAAATGCTGTGTaGGAGAGAATGCTCCGTTCCAATCATCGTGCTAATTACTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: GAKLHKKQSAKRNAV*ERMLRSNHRANYFK Trigger: CTTAAAGTAATTAGCACGATGATTGGAACGGAGCATTCTCTCCAACACAGCATTTCTTTTGGCACTTTGCTTCTTGTGCAGTTTAGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS TCA 72 bp | TCACACCTTATCAAGGGTATATATCAACATGACTCGTaGCTGTTGATGTTAACCTTGATTACCTGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SHLIKGIYQHDS*LLMLTLITWLR Trigger: CCTCAGCCAGGTAATCAAGGTTAACATCAACAGTCACGAGTCATGTTGATATATACCCTTGATAAGGTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CAA 72 bp | GAAATAGTGCAGTATTGTGGACTAGTCAGACATGAGTaGCATTCCCAGCTCCATCACCTACTAGATATATCA | + |
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Preference number: 6 (lower is better) Translates to: EIVQYCGLVRHE*HSQLHHLLDIS Trigger: TGATATATCTAGTAGGTGATGGAGCTGGGAATGCAACTCATGTCTGACTAGTCCACAATACTGCACTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS GCA 72 bp | ATTCTACAACACAAATGTCACATTAACACCAAATTATaGGGAATCCATCTTACCCTGGGCGTACAGAGAATC | + |
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Preference number: 6 (lower is better) Translates to: ILQHKCHINTKL*GIHLTLGVQRI Trigger: GATTCTCTGTACGCCCAGGGTAAGATGGATTCCGCATAATTTGGTGTTAATGTGACATTTGTGTTGTAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491851.5 |
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| CDS CCA 72 bp | GAGTGCAGATATCTCTTTGATATACCGATTTTCTTCTaGGTATATACCCAGCAGTGGGATTGTTGGATCATA | + |
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Preference number: 6 (lower is better) Translates to: ECRYLFDIPIFF*VYTQQWDCWII Trigger: TATGATCCAACAATCCCACTGCTGGGTATATACCCAGAAGAAAATCGGTATATCAAAGAGATATCTGCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CAA 72 bp | CAGTGCTACAACAAACATAGGAGTGCAGATATCTCTTaGATATACCGATTTTCTTCTGGGTATATACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: QCYNKHRSADIS*IYRFSSGYIPS Trigger: GCTGGGTATATACCCAGAAGAAAATCGGTATATCAAAGAGATATCTGCACTCCTATGTTTGTTGTAGCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CCA 72 bp | AATACAGAATTCAGGAGGCTAGCAGAAAGGCCTAAATaGCTATTCTATAAGAGTTTTAAGACTTCACGAGAA | + |
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Preference number: 6 (lower is better) Translates to: NTEFRRLAERPK*LFYKSFKTSRE Trigger: TTCTCGTGAAGTCTTAAAACTCTTATAGAATAGCCATTTAGGCCTTTCTGCTAGCCTCCTGAATTCTGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CAA 90 bp | TCTGGTAACCATCCTTCTACTCTCTATATGACAAGTCCACTTGTTTaGATTTTTAGATCCCACAAACAAGAACATGTGATGCTTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SGNHPSTLYMTSPLV*IFRSHKQEHVMLVF Trigger: AAAGACAAGCATCACATGTTCTTGTTTGTGGGATCTAAAAATCAAAACAAGTGGACTTGTCATATAGAGAGTAGAAGGATGGTTACCAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS TCA 72 bp | ATTTTCATCACACCTTATCAAGGGTATATATCAACATaGCTCGTGACTGTTGATGTTAACCTTGATTACCTG | + |
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Preference number: 6 (lower is better) Translates to: IFITPYQGYIST*LVTVDVNLDYL Trigger: CAGGTAATCAAGGTTAACATCAACAGTCACGAGTCATGTTGATATATACCCTTGATAAGGTGTGATGAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CCA 72 bp | GCGTATAGGTACATTTTCTTTATCCATTCATCCCGATaGACACTAAGGTTGCTTCTAAATCTTAGCTATTAT | + |
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Preference number: 6 (lower is better) Translates to: AYRYIFFIHSSR*TLRLLLNLSYY Trigger: ATAATAGCTAAGATTTAGAAGCAACCTTAGTGTCCATCGGGATGAATGGATAAAGAAAATGTACCTATACGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CAA 72 bp | CATCCTTCTACTCTCTATATGACAAGTCCACTTGTTTaGATTTTTAGATCCCACAAACAAGAACATGTGATG | + |
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Preference number: 6 (lower is better) Translates to: HPSTLYMTSPLV*IFRSHKQEHVM Trigger: CATCACATGTTCTTGTTTGTGGGATCTAAAAATCAAAACAAGTGGACTTGTCATATAGAGAGTAGAAGGATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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| CDS CAA 72 bp | ATTTTCTTTATCCATTCATCCCGATGGACACTAAGGTaGCTTCTAAATCTTAGCTATTATAAACAGTGCTAC | + |
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Preference number: 6 (lower is better) Translates to: IFFIHSSRWTLR*LLNLSYYKQCY Trigger: GTAGCACTGTTTATAATAGCTAAGATTTAGAAGCAACCTTAGTGTCCATCGGGATGAATGGATAAAGAAAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465340.5 |
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