Pregenerated sensors for RPL34 (Homo sapiens)
Ensembl gene IDs: ENSG00000109475Ensembl transcript IDs: ENST00000394668.2, ENST00000502534.5, ENST00000503574.1, ENST00000504231.1, ENST00000506397.5
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGATGCAAAACTGGAAAGAGATGCACACAACTGGCTCTCTCAAGCTaGGGTGAGGTAGCTCCAGCACACCAACTTTTTCTATTGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: GCKTGKRCTQLALSS*GEVAPAHQLFLLDS Trigger: GCTGTCCAATAGAAAAAGTTGGTGTGCTGGAGCTACCTCACCTCAGCTTGAGAGAGCCAGTTGTGTGCATCTCTTTCCAGTTTTGCATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR TCA 90 bp | CAAAACTGGAAAGAGATGCACACAACTGGCTCTCTCAAGCTGAGGTaGGGTAGCTCCAGCACACCAACTTTTTCTATTGGACAGCGTCTT | + |
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Preference number: 1 (lower is better) Translates to: QNWKEMHTTGSLKLR*GSSSTPTFSIGQRL Trigger: AAGACGCTGTCCAATAGAAAAAGTTGGTGTGCTGGAGCTACCTCACCTCAGCTTGAGAGAGCCAGTTGTGTGCATCTCTTTCCAGTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGATATATATCAGAGCTCCTGGTACCAAGAGCATACTATATTAGTGATCATTCTCTCAAGCTGAGGTaGGGTAGCTCCAGCACACCA | + |
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Preference number: 2 (lower is better) Translates to: TRYISELLVPRAYYISDHSLKLR*GSSSTP Trigger: TGGTGTGCTGGAGCTACCTCACCTCAGCTTGAGAGA...ATGATCACTAATATAGTATGCTCTTGGTACCAGGAGCTCTGATATATATCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR-3UTR GCA 90 bp | ACATGTACCAGATATATATCAGAGCTCCTGGTACCAAGAGCATACTATATTAGTGCAGACGTCACTGGATaGAAAACTGGAAAGAGATGC | + |
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Preference number: 2 (lower is better) Translates to: TCTRYISELLVPRAYYISADVTG*KTGKRC Trigger: GCATCTCTTTCCAGTTTTGCATCCAGTGACGTCTGC...ACTAATATAGTATGCTCTTGGTACCAGGAGCTCTGATATATATCTGGTACATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGATATATATCAGAGCTCCTGGTACCAAGAGCATACTATATTAGTGATCATCACTGGATGCAAAACTaGAAAGAGATGCACACAACT | + |
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Preference number: 2 (lower is better) Translates to: TRYISELLVPRAYYISDHHWMQN*KEMHTT Trigger: AGTTGTGTGCATCTCTTTCCAGTTTTGCATCCAGTG...ATGATCACTAATATAGTATGCTCTTGGTACCAGGAGCTCTGATATATATCTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR-3UTR TCA 90 bp | ACATGTACCAGATATATATCAGAGCTCCTGGTACCAAGAGCATACTATATTAGTTCATATACTGTAACTTaGGTAGTATCTAGGGATGTG | + |
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Preference number: 2 (lower is better) Translates to: TCTRYISELLVPRAYYISSYTVT*VVSRDV Trigger: CACATCCCTAGATACTACTCAAGTTACAGTATATGA...ACTAATATAGTATGCTCTTGGTACCAGGAGCTCTGATATATATCTGGTACATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR GCA 72 bp | AACCTGGAAGGCAGAGGGTGCGGTGAGCCGAGATCCTaGCATTGTACTCCAGCAGCGTCTTTTCATTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: NLEGRGCGEPRS*HCTPAASFHFY Trigger: ATAAAAATGAAAAGACGCTGCTGGAGTACAATGGCAGGATCTCGGCTCACCGCACCCTCTGCCTTCCAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502534.5 |
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| 3UTR CCA 72 bp | CTCAAGATGCCAAGCAGACGTCACTGGATGCAAAACTaGAAAGAGATGCACACAACTGGCTCTCTCAAGCTG | + |
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Preference number: 3 (lower is better) Translates to: LKMPSRRHWMQN*KEMHTTGSLKL Trigger: CAGCTTGAGAGAGCCAGTTGTGTGCATCTCTTTCCAGTTTTGCATCCAGTGACGTCTGCTTGGCATCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR TCA 72 bp | ACTGGAAAGAGATGCACACAACTGGCTCTCTCAAGCTaGGGTGAGGTAGCTCCAGCACACCAACTTTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: TGKRCTQLALSS*GEVAPAHQLFL Trigger: TAGAAAAAGTTGGTGTGCTGGAGCTACCTCACCTCAGCTTGAGAGAGCCAGTTGTGTGCATCTCTTTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR TCA 72 bp | AAAGAGATGCACACAACTGGCTCTCTCAAGCTGAGGTaGGGTAGCTCCAGCACACCAACTTTTTCTATTGGA | + |
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Preference number: 3 (lower is better) Translates to: KEMHTTGSLKLR*GSSSTPTFSIG Trigger: TCCAATAGAAAAAGTTGGTGTGCTGGAGCTACCTCACCTCAGCTTGAGAGAGCCAGTTGTGTGCATCTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR CCA 72 bp | CACCATAACAATCTCAAGATGCCAAGCAGACGTCACTaGATGCAAAACTGGAAAGAGATGCACACAACTGGC | + |
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Preference number: 3 (lower is better) Translates to: HHNNLKMPSRRH*MQNWKEMHTTG Trigger: GCCAGTTGTGTGCATCTCTTTCCAGTTTTGCATCCAGTGACGTCTGCTTGGCATCTTGAGATTGTTATGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR-3UTR CAA 90 bp | ACCAGATATATATCAGAGCTCCTGGTACCAAGAGCATACTATATTAGTGATCATGGGGAAAACAGGATTTaGCAGCATTTGCTGAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: TRYISELLVPRAYYISDHGENRI*QHLLRC Trigger: ACACCTCAGCAAATGCTGCAAAATCCTGTTTTCCCC...ATGATCACTAATATAGTATGCTCTTGGTACCAGGAGCTCTGATATATATCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR-3UTR CAA 90 bp | CAAACATGTACCAGATATATATCAGAGCTCCTGGTACCAAGAGCATACTATATTAGGATTTTGCAGCATTaGCTGAGGTGTAAATACTCT | + |
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Preference number: 3 (lower is better) Translates to: QTCTRYISELLVPRAYYIRILQH*LRCKYS Trigger: AGAGTATTTACACCTCAGCAAATGCTGCAAAATCCT...AATATAGTATGCTCTTGGTACCAGGAGCTCTGATATATATCTGGTACATGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR-3UTR CAA 90 bp | TGTACCAGATATATATCAGAGCTCCTGGTACCAAGAGCATACTATATTAGTGATCACCAACTTTTTCTATaGGACAGCGTCTTTTCATTT | + |
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Preference number: 3 (lower is better) Translates to: CTRYISELLVPRAYYISDHQLFL*DSVFSF Trigger: AAATGAAAAGACGCTGTCCAATAGAAAAAGTTGGTG...ATCACTAATATAGTATGCTCTTGGTACCAGGAGCTCTGATATATATCTGGTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS-3UTR GCA 90 bp | GCGGTGAGCCGAGATCCTGCCATTGTACTCCAGCAGCGTCTTTTCATTTTTATTCTGGAAGGCAGAGGGTaGGGTGAGCCGAGATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: AVSRDPAIVLQQRLFIFILEGRG*GEPRSC Trigger: GCAGGATCTCGGCTCACCGCACCCTCTGCCTTCCAG...AATAAAAATGAAAAGACGCTGCTGGAGTACAATGGCAGGATCTCGGCTCACCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502534.5 |
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| CDS-3UTR TCA 90 bp | GCCAAGCAGACGTCACTGGATGCAAAACTGGAAAGAGATGCACACAACTGGCTCTCTCTCAAGCTGAGGTaGGGTAGCTCCAGCACACCA | + |
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Preference number: 4 (lower is better) Translates to: AKQTSLDAKLERDAHNWLSLKLR*GSSSTP Trigger: TGGTGTGCTGGAGCTACCTCACCTCAGCTTGAGAGA...GAGCCAGTTGTGTGCATCTCTTTCCAGTTTTGCATCCAGTGACGTCTGCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS-3UTR TCA 90 bp | AAGCAGACGTCACTGGATGCAAAACTGGAAAGAGATGCACACAACTGGCTCTCTAACGCTGGACCATTCTaGGTGCCCCTACACCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KQTSLDAKLERDAHNWLSNAGPF*VPLHQL Trigger: GAGCTGGTGTAGGGGCACTCAGAATGGTCCAGCGTT...AGAGAGCCAGTTGTGTGCATCTCTTTCCAGTTTTGCATCCAGTGACGTCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS-3UTR TCA 90 bp | GCGGTGAGCCGAGATCCTGCCATTGTACTCCAGCAGCGTCTTTTCATTTTTATTGGCAGGAGAATCACTTaGACCTGGAAGGCAGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVSRDPAIVLQQRLFIFIGRRIT*TWKAEG Trigger: ACCCTCTGCCTTCCAGGTTCAAGTGATTCTCCTGCC...AATAAAAATGAAAAGACGCTGCTGGAGTACAATGGCAGGATCTCGGCTCACCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502534.5 |
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| CDS-3UTR GCA 90 bp | AAGCAGACGTCACTGGATGCAAAACTGGAAAGAGATGCACACAACTGGCTCTCTGCAGACGTCACTGGATaGAAAACTGGAAAGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: KQTSLDAKLERDAHNWLSADVTG*KTGKRC Trigger: GCATCTCTTTCCAGTTTTGCATCCAGTGACGTCTGC...AGAGAGCCAGTTGTGTGCATCTCTTTCCAGTTTTGCATCCAGTGACGTCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS-3UTR GCA 90 bp | ACCAGATATATATCAGAGCTCCTGGTACCAAGAGCATACTATATTAGTGATCATCTGGACCATTCTGAGTaGCCCTACACCAGCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: TRYISELLVPRAYYISDHLDHSE*PYTSSK Trigger: CTTTGAGCTGGTGTAGGGGCACTCAGAATGGTCCAG...ATGATCACTAATATAGTATGCTCTTGGTACCAGGAGCTCTGATATATATCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS-3UTR CCA 90 bp | AAGCAGACGTCACTGGATGCAAAACTGGAAAGAGATGCACACAACTGGCTCTCTATATATCAGAGCTCCTaGTACCAAGAGCATACTATA | + |
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Preference number: 4 (lower is better) Translates to: KQTSLDAKLERDAHNWLSIYQSS*YQEHTI Trigger: TATAGTATGCTCTTGGTACCAGGAGCTCTGATATAT...AGAGAGCCAGTTGTGTGCATCTCTTTCCAGTTTTGCATCCAGTGACGTCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| 3UTR CAA 72 bp | TATTTAACCTCCAGCTCTCTGGGGGAAAACAGGATTTaGCAGCATTTGCTGAGGTGTAAATACTCTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: YLTSSSLGENRI*QHLLRCKYSHH Trigger: ATGGTGAGAGTATTTACACCTCAGCAAATGCTGCAAAATCCTGTTTTCCCCCAGAGAGCTGGAGGTTAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGTACCAAGAGCATACTATATTAGTGATCATATACTGTAACTTGAGTAGTAGAGATGCACACAACTaGCTCTCTCAAGCTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SWYQEHTILVIIYCNLSSRDAHN*LSQAEV Trigger: CACCTCAGCTTGAGAGAGCCAGTTGTGTGCATCTCT...ACTACTCAAGTTACAGTATATGATCACTAATATAGTATGCTCTTGGTACCAGGA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS-3UTR TCA 90 bp | CAGAGCTCCTGGTACCAAGAGCATACTATATTAGTGATCATATACTGTAACTTGTTTTGCAGCATTTGCTaGGGTGTAAATACTCTCACC | + |
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Preference number: 4 (lower is better) Translates to: QSSWYQEHTILVIIYCNLFCSIC*GVNTLT Trigger: GGTGAGAGTATTTACACCTCAGCAAATGCTGCAAAA...CAAGTTACAGTATATGATCACTAATATAGTATGCTCTTGGTACCAGGAGCTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS-3UTR CCA 90 bp | ACAATCAAGTCATTATCAAACATGTACCAGATATATATCAGAGCTCCTGGTACCCACTGGATGCAAAACTaGAAAGAGATGCACACAACT | + |
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Preference number: 4 (lower is better) Translates to: TIKSLSNMYQIYIRAPGTHWMQN*KEMHTT Trigger: AGTTGTGTGCATCTCTTTCCAGTTTTGCATCCAGTG...GGTACCAGGAGCTCTGATATATATCTGGTACATGTTTGATAATGACTTGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS CCA 90 bp | CAAACGCTACACTTGGAATGCAGCAAAGTCCCGGGTGGTGAGCTGTaGCTACTCACGGCTTTGGAGGTGCCACCAGGAACAAGGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: QTLHLECSKVPGGEL*LLTALEVPPGTRDF Trigger: GAAATCCCTTGTTCCTGGTGGCACCTCCAAAGCCGTGAGTAGCCACAGCTCACCACCCGGGACTTTGCTGCATTCCAAGTGTAGCGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS GCA 90 bp | ACCGCCAAACCACAACTCGTTAGTCTCCAAACGCTACACTTGGAATaGAGCAAAGTCCCGGGTGGTGAGCTGTGGCTACTCACGGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: TAKPQLVSLQTLHLE*SKVPGGELWLLTAL Trigger: CAAAGCCGTGAGTAGCCACAGCTCACCACCCGGGACTTTGCTGCATTCCAAGTGTAGCGTTTGGAGACTAACGAGTTGTGGTTTGGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CCA 90 bp | CTCAAACCGCCAAACCACAACTCGTTAGTCTCCAAACGCTACACTTaGAATGCAGCAAAGTCCCGGGTGGTGAGCTGTGGCTACTCACGG | + |
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Preference number: 5 (lower is better) Translates to: LKPPNHNSLVSKRYT*NAAKSRVVSCGYSR Trigger: CCGTGAGTAGCCACAGCTCACCACCCGGGACTTTGCTGCATTCCAAGTGTAGCGTTTGGAGACTAACGAGTTGTGGTTTGGCGGTTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS GCA 90 bp | GCAAAGTCCCGGGTGGTGAGCTGTGGCTACTCACGGCTTTGGAGGTaGCACCAGGAACAAGGGATTTCCAAAGATCAAAGTAAGGAACTT | + |
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Preference number: 5 (lower is better) Translates to: AKSRVVSCGYSRLWR*HQEQGISKDQSKEL Trigger: AAGTTCCTTACTTTGATCTTTGGAAATCCCTTGTTCCTGGTGGCACCTCCAAAGCCGTGAGTAGCCACAGCTCACCACCCGGGACTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CCA 90 bp | AATGCAGCAAAGTCCCGGGTGGTGAGCTGTGGCTACTCACGGCTTTaGAGGTGCCACCAGGAACAAGGGATTTCCAAAGATCAAAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: NAAKSRVVSCGYSRL*RCHQEQGISKDQSK Trigger: CTTACTTTGATCTTTGGAAATCCCTTGTTCCTGGTGGCACCTCCAAAGCCGTGAGTAGCCACAGCTCACCACCCGGGACTTTGCTGCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS-3UTR CAA 90 bp | GCGGTGAGCCGAGATCCTGCCATTGTACTCCAGCAGCGTCTTTTCATTTTTATTAGGCAGGAGAATCACTaGAACCTGGAAGGCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: AVSRDPAIVLQQRLFIFIRQENH*NLEGRG Trigger: CCCTCTGCCTTCCAGGTTCAAGTGATTCTCCTGCCT...AATAAAAATGAAAAGACGCTGCTGGAGTACAATGGCAGGATCTCGGCTCACCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000502534.5 |
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| CDS GCA 90 bp | GCTGTCATTAGGATTAAACGACGTGGGCTATCCGTCCCAACACAATaGCTGGCACATATCAGGGTTCAATGTCTTGCCCTAAAGCACCAC | + |
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Preference number: 5 (lower is better) Translates to: AVIRIKRRGLSVPTQ*LAHIRVQCLALKHH Trigger: GTGGTGCTTTAGGGCAAGACATTGAACCCTGATATGTGCCAGGCATTGTGTTGGGACGGATAGCCCACGTCGTTTAATCCTAATGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS-3UTR CAA 90 bp | AACAATCTCAAGATGCCAAGCAGACGTCACTGGATGCAAAACTGGAAAGAGATGGGGGAAAACAGGATTTaGCAGCATTTGCTGAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: NNLKMPSRRHWMQNWKEMGENRI*QHLLRC Trigger: ACACCTCAGCAAATGCTGCAAAATCCTGTTTTCCCC...CATCTCTTTCCAGTTTTGCATCCAGTGACGTCTGCTTGGCATCTTGAGATTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS CCA 90 bp | AAACAAGAGGCCAAGAATGTTAGCTTTCCTGATGGTAATCAAACGTaGCACTTCCTTAACGTTCTGATGACCAGGCTCCTTACTCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: KQEAKNVSFPDGNQT*HFLNVLMTRLLTQS Trigger: ACTCTGAGTAAGGAGCCTGGTCATCAGAACGTTAAGGAAGTGCCACGTTTGATTACCATCAGGAAAGCTAACATTCTTGGCCTCTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS-3UTR CAA 90 bp | AACAATCTCAAGATGCCAAGCAGACGTCACTGGATGCAAAACTGGAAAGAGATGAGGATTTTGCAGCATTaGCTGAGGTGTAAATACTCT | + |
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Preference number: 5 (lower is better) Translates to: NNLKMPSRRHWMQNWKEMRILQH*LRCKYS Trigger: AGAGTATTTACACCTCAGCAAATGCTGCAAAATCCT...CATCTCTTTCCAGTTTTGCATCCAGTGACGTCTGCTTGGCATCTTGAGATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS TCA 90 bp | CTTTGGGTTATGGCACCTGCTTTCTTCCCACTTCTGGAAACATCGTaGTGTTATTTAGCAAATCGGTTATACAGATATGCATACGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: LWVMAPAFFPLLETS*CYLANRLYRYAYEQ Trigger: TTGCTCGTATGCATATCTGTATAACCGATTTGCTAAATAACATCACGATGTTTCCAGAAGTGGGAAGAAAGCAGGTGCCATAACCCAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS GCA 90 bp | TCTGGAAACATCGTGATGTTATTTAGCAAATCGGTTATACAGATATaGATACGAGCAACTTCGTTAAGGGAACTACCCAACGTAAAACAT | + |
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Preference number: 5 (lower is better) Translates to: SGNIVMLFSKSVIQI*IRATSLRELPNVKH Trigger: ATGTTTTACGTTGGGTAGTTCCCTTAACGAAGTTGCTCGTATGCATATCTGTATAACCGATTTGCTAAATAACATCACGATGTTTCCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CCA 90 bp | GGTGTACTCATTTATCTGAAAGGCATTTCACTGCATTTCTCAGATTaGTTTAAAAAGTCTATGTTCGTGGCAGATTTGGCTCATGAATGT | + |
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Preference number: 5 (lower is better) Translates to: GVLIYLKGISLHFSD*FKKSMFVADLAHEC Trigger: ACATTCATGAGCCAAATCTGCCACGAACATAGACTTTTTAAACCAATCTGAGAAATGCAGTGAAATGCCTTTCAGATAAATGAGTACACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000503574.1 ENST00000504231.1 |
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| CDS-3UTR CAA 90 bp | ACAATCAAGTCATTATCAAACATGTACCAGATATATATCAGAGCTCCTGGTACCCACCAACTTTTTCTATaGGACAGCGTCTTTTCATTT | + |
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Preference number: 5 (lower is better) Translates to: TIKSLSNMYQIYIRAPGTHQLFL*DSVFSF Trigger: AAATGAAAAGACGCTGTCCAATAGAAAAAGTTGGTG...GGTACCAGGAGCTCTGATATATATCTGGTACATGTTTGATAATGACTTGATTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394668.2 |
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| CDS TCA 72 bp | AACGCTACACTTGGAATGCAGCAAAGTCCCGGGTGGTaGGCTGTGGCTACTCACGGCTTTGGAGGTGCCACC | + |
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Preference number: 6 (lower is better) Translates to: NATLGMQQSPGW*AVATHGFGGAT Trigger: GGTGGCACCTCCAAAGCCGTGAGTAGCCACAGCTCACCACCCGGGACTTTGCTGCATTCCAAGTGTAGCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CCA 72 bp | CACTTGGAATGCAGCAAAGTCCCGGGTGGTGAGCTGTaGCTACTCACGGCTTTGGAGGTGCCACCAGGAACA | + |
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Preference number: 6 (lower is better) Translates to: HLECSKVPGGEL*LLTALEVPPGT Trigger: TGTTCCTGGTGGCACCTCCAAAGCCGTGAGTAGCCACAGCTCACCACCCGGGACTTTGCTGCATTCCAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS GCA 72 bp | AGCCTGGTCTCAAACTCCCAACCTCAGGTATCTGCCTaGCTCCGCCTCCCAAAGTGTTGGGATTTCAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SLVSNSQPQVSA*LRLPKCWDFRH Trigger: ATGCCTGAAATCCCAACACTTTGGGAGGCGGAGGCAGGCAGATACCTGAGGTTGGGAGTTTGAGACCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CCA 72 bp | TTGGAGTGGTGTCCAGAAAAGTGCCACGAGCCCAGTTaGAGAAACACCGCCCTACACCAGCTCAAAGGACTG | + |
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Preference number: 6 (lower is better) Translates to: LEWCPEKCHEPS*RNTALHQLKGL Trigger: CAGTCCTTTGAGCTGGTGTAGGGCGGTGTTTCTCCAACTGGGCTCGTGGCACTTTTCTGGACACCACTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506397.5 |
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| CDS CCA 72 bp | AAGTCCCGGGTGGTGAGCTGTGGCTACTCACGGCTTTaGAGGTGCCACCAGGAACAAGGGATTTCCAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: KSRVVSCGYSRL*RCHQEQGISKD Trigger: ATCTTTGGAAATCCCTTGTTCCTGGTGGCACCTCCAAAGCCGTGAGTAGCCACAGCTCACCACCCGGGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CAA 72 bp | AAAGTCCCGGGTGGTGAGCTGTGGCTACTCACGGCTTaGGAGGTGCCACCAGGAACAAGGGATTTCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: KVPGGELWLLTA*EVPPGTRDFQR Trigger: TCTTTGGAAATCCCTTGTTCCTGGTGGCACCTCCAAAGCCGTGAGTAGCCACAGCTCACCACCCGGGACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS GCA 72 bp | CGGGTGGTGAGCTGTGGCTACTCACGGCTTTGGAGGTaGCACCAGGAACAAGGGATTTCCAAAGATCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: RVVSCGYSRLWR*HQEQGISKDQS Trigger: ACTTTGATCTTTGGAAATCCCTTGTTCCTGGTGGCACCTCCAAAGCCGTGAGTAGCCACAGCTCACCACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS GCA 72 bp | CCACAACTCGTTAGTCTCCAAACGCTACACTTGGAATaGAGCAAAGTCCCGGGTGGTGAGCTGTGGCTACTC | + |
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Preference number: 6 (lower is better) Translates to: PQLVSLQTLHLE*SKVPGGELWLL Trigger: GAGTAGCCACAGCTCACCACCCGGGACTTTGCTGCATTCCAAGTGTAGCGTTTGGAGACTAACGAGTTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CAA 72 bp | GCCAAACCACAACTCGTTAGTCTCCAAACGCTACACTaGGAATGCAGCAAAGTCCCGGGTGGTGAGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: AKPQLVSLQTLH*ECSKVPGGELW Trigger: CCACAGCTCACCACCCGGGACTTTGCTGCATTCCAAGTGTAGCGTTTGGAGACTAACGAGTTGTGGTTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CAA 90 bp | ACTCAAACCGCCAAACCACAACTCGTTAGTCTCCAAACGCTACACTaGGAATGCAGCAAAGTCCCGGGTGGTGAGCTGTGGCTACTCACG | + |
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Preference number: 6 (lower is better) Translates to: TQTAKPQLVSLQTLH*ECSKVPGGELWLLT Trigger: CGTGAGTAGCCACAGCTCACCACCCGGGACTTTGCTGCATTCCAAGTGTAGCGTTTGGAGACTAACGAGTTGTGGTTTGGCGGTTTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CCA 72 bp | TTTAGTAGAGACGGTGTTTCTCCATGTTGGTCAGCCTaGTCTCAAACTCCCAACCTCAGGTATCTGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: FSRDGVSPCWSA*SQTPNLRYLPA Trigger: GGCAGGCAGATACCTGAGGTTGGGAGTTTGAGACCAGGCTGACCAACATGGAGAAACACCGTCTCTACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CAA 72 bp | GCCACCACACCTGGCCATAATCTGGCTTTTCTACCTTaGTTGTCCATCATCTCCTGCAACCCTATGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: ATTPGHNLAFLP*LSIISCNPMLM Trigger: CATGAGCATAGGGTTGCAGGAGATGATGGACAACAAAGGTAGAAAAGCCAGATTATGGCCAGGTGTGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CCA 72 bp | CTGGACCATTCTGAGTGCTCAGAGTCTAATTTTGTTTaGAGTGGTGTCCAGAAAAGTGCCACGAGCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LDHSECSESNFV*SGVQKSATSPV Trigger: AACTGGGCTCGTGGCACTTTTCTGGACACCACTCCAAACAAAATTAGACTCTGAGCACTCAGAATGGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506397.5 |
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| CDS CCA 72 bp | GATGACCAGGCTCCTTACTCAGAGTCTAATTTTGTTTaGAGTGGTGTCCAGAAAAGTGCCACGAGCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: DDQAPYSESNFV*SGVQKSATSPV Trigger: AACTGGGCTCGTGGCACTTTTCTGGACACCACTCCAAACAAAATTAGACTCTGAGTAAGGAGCCTGGTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CAA 72 bp | AAACGCTGGACCATTCTGAGTGCTCAGAGTCTAATTTaGTTTGGAGTGGTGTCCAGAAAAGTGCCACGAGCC | + |
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Preference number: 6 (lower is better) Translates to: KRWTILSAQSLI*FGVVSRKVPRA Trigger: GGCTCGTGGCACTTTTCTGGACACCACTCCAAACAAAATTAGACTCTGAGCACTCAGAATGGTCCAGCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506397.5 |
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| CDS CAA 72 bp | GTTCTGATGACCAGGCTCCTTACTCAGAGTCTAATTTaGTTTGGAGTGGTGTCCAGAAAAGTGCCACGAGCC | + |
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Preference number: 6 (lower is better) Translates to: VLMTRLLTQSLI*FGVVSRKVPRA Trigger: GGCTCGTGGCACTTTTCTGGACACCACTCCAAACAAAATTAGACTCTGAGTAAGGAGCCTGGTCATCAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CAA 90 bp | TTCCTTAACGTTCTGATGACCAGGCTCCTTACTCAGAGTCTAATTTaGTTTGGAGTGGTGTCCAGAAAAGTGCCACGAGCCCAGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FLNVLMTRLLTQSLI*FGVVSRKVPRAQLE Trigger: CTCCAACTGGGCTCGTGGCACTTTTCTGGACACCACTCCAAACAAAATTAGACTCTGAGTAAGGAGCCTGGTCATCAGAACGTTAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CCA 72 bp | TTGGAGTGGTGTCCAGAAAAGTGCCACGAGCCCAGTTaGAGAAACACCGCTTTAAACAAAGAGCACAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: LEWCPEKCHEPS*RNTALNKEHKK Trigger: CTTTTTGTGCTCTTTGTTTAAAGCGGTGTTTCTCCAACTGGGCTCGTGGCACTTTTCTGGACACCACTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CAA 72 bp | TTTGGAGTGGTGTCCAGAAAAGTGCCACGAGCCCAGTaGGAGAAACACCGCTTTAAACAAAGAGCACAAAAA | + |
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Preference number: 6 (lower is better) Translates to: FGVVSRKVPRAQ*EKHRFKQRAQK Trigger: TTTTTGTGCTCTTTGTTTAAAGCGGTGTTTCTCCAACTGGGCTCGTGGCACTTTTCTGGACACCACTCCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CAA 72 bp | CCTACACTTTTAACACCTTCCACACTCCATCTATCTTaGTCCAAACCACTAACAGAGACTTTCTTACCCACC | + |
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Preference number: 6 (lower is better) Translates to: PTLLTPSTLHLS*SKPLTETFLPT Trigger: GGTGGGTAAGAAAGTCTCTGTTAGTGGTTTGGACAAAGATAGATGGAGTGTGGAAGGTGTTAAAAGTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS TCA 72 bp | ATGGCACCTGCTTTCTTCCCACTTCTGGAAACATCGTaGTGTTATTTAGCAAATCGGTTATACAGATATGCA | + |
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Preference number: 6 (lower is better) Translates to: MAPAFFPLLETS*CYLANRLYRYA Trigger: TGCATATCTGTATAACCGATTTGCTAAATAACATCACGATGTTTCCAGAAGTGGGAAGAAAGCAGGTGCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS GCA 72 bp | ATCGTGATGTTATTTAGCAAATCGGTTATACAGATATaGATACGAGCAACTTCGTTAAGGGAACTACCCAAC | + |
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Preference number: 6 (lower is better) Translates to: IVMLFSKSVIQI*IRATSLRELPN Trigger: GTTGGGTAGTTCCCTTAACGAAGTTGCTCGTATGCATATCTGTATAACCGATTTGCTAAATAACATCACGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS GCA 72 bp | AAGGGTTCTAAAGCATGCAACTGGTTTAAAATGAGTTaGTTCACCATTGTACTGATCAGCAGACAGTATAAC | + |
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Preference number: 6 (lower is better) Translates to: KGSKACNWFKMS*FTIVLISRQYN Trigger: GTTATACTGTCTGCTGATCAGTACAATGGTGAAGCAACTCATTTTAAACCAGTTGCATGCTTTAGAACCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503574.1 |
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| CDS CAA 90 bp | CTGCATTTCTCAGATTGGTTTAAAAAGTCTATGTTCGTGGCAGATTaGGCTCATGAATGTTTAGTAATTCTGAACCCTCTTAGTGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: LHFSDWFKKSMFVAD*AHECLVILNPLSGN Trigger: GTTACCACTAAGAGGGTTCAGAATTACTAAACATTCATGAGCCAAATCTGCCACGAACATAGACTTTTTAAACCAATCTGAGAAATGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000503574.1 ENST00000504231.1 |
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| CDS CCA 72 bp | GTTAAGGGCAAGTTTAAAGTAGGTTACAAAGGGAAATaGTGTACTCATTTATCTGAAAGGCATTTCACTGCA | + |
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Preference number: 6 (lower is better) Translates to: VKGKFKVGYKGK*CTHLSERHFTA Trigger: TGCAGTGAAATGCCTTTCAGATAAATGAGTACACCATTTCCCTTTGTAACCTACTTTAAACTTGCCCTTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503574.1 ENST00000504231.1 |
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| CDS CAA 72 bp | TCAGATTGGTTTAAAAAGTCTATGTTCGTGGCAGATTaGGCTCATGAATGTTTAGTAATTCTGAACCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SDWFKKSMFVAD*AHECLVILNPL Trigger: AAGAGGGTTCAGAATTACTAAACATTCATGAGCCAAATCTGCCACGAACATAGACTTTTTAAACCAATCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000503574.1 ENST00000504231.1 |
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