Pregenerated sensors for RPL27 (Homo sapiens)
Ensembl gene IDs: ENSG00000131469Ensembl transcript IDs: ENST00000586277.5, ENST00000587478.1, ENST00000589037.5, ENST00000589913.6, ENST00000590864.2, ENST00000593262.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TGTTCTGTAGTCCCAGCCACTCGAGAGGCTGAGATGGGAGACTCGCTTGAGCCCCTCGAGAGGCTGAGATaGGAGACTCGCTTGAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CSVVPATREAEMGDSLEPLERLR*ETRLSP Trigger: CGGGCTCAAGCGAGTCTCCCATCTCAGCCTCTCGAG...GGGCTCAAGCGAGTCTCCCATCTCAGCCTCTCGAGTGGCTGGGACTACAGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590864.2 |
||
| CDS GCA 90 bp | CAGGACAGGATCGGATACGTAGCCGCCAGAGACCTAGGGAAGGAATaGACCCGGCGCCGCCCGGACCTTCGACCCCCAAGCCGCGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: QDRIGYVAARDLGKE*TRRRPDLRPPSRGW Trigger: CCATCCGCGGCTTGGGGGTCGAAGGTCCGGGCGGCGCCGGGTGCATTCCTTCCCTAGGTCTCTGGCGGCTACGTATCCGATCCTGTCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS GCA 90 bp | TGCTCACTGGCTACTGCCCCAGAAACAGGCCTTGAATTCCAAGCCTaGCCGCCCCGCCGCAGCCAGCCTGGTCCCGGCATGCAAGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLATAPETGLEFQA*PPRRSQPGPGMQGR Trigger: GCGTCCTTGCATGCCGGGACCAGGCTGGCTGCGGCGGGGCGGGCAGGCTTGGAATTCAAGGCCTGTTTCTGGGGCAGTAGCCAGTGAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000587478.1 ENST00000593262.1 |
||
| CDS GCA 90 bp | AATTCCAAGCCTGCCCGCCCCGCCGCAGCCAGCCTGGTCCCGGCATaGAAGGACGCAGAGTCCCGCGAGGCTGATACCTTCACGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: NSKPARPAAASLVPA*KDAESREADTFTMT Trigger: TGTCATCGTGAAGGTATCAGCCTCGCGGGACTCTGCGTCCTTGCATGCCGGGACCAGGCTGGCTGCGGCGGGGCGGGCAGGCTTGGAATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000586277.5 ENST00000587478.1 ENST00000593262.1 |
||
| CDS GCA 90 bp | CAGACTGTGTTCACTGTCGCCTTGGTCAAGGCCGCCCGAGGGCCCTaGTCGCAGGACAGGATCGGATACGTAGCCGCCAGAGACCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QTVFTVALVKAARGP*SQDRIGYVAARDLG Trigger: CCCTAGGTCTCTGGCGGCTACGTATCCGATCCTGTCCTGCGAGCAGGGCCCTCGGGCGGCCTTGACCAAGGCGACAGTGAACACAGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS CCA 90 bp | GCCCAGGTCTTGGGCCGGAACTTCAGACTGTGTTCACTGTCGCCTTaGTCAAGGCCGCCCGAGGGCCCTGCTCGCAGGACAGGATCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AQVLGRNFRLCSLSP*SRPPEGPARRTGSD Trigger: ATCCGATCCTGTCCTGCGAGCAGGGCCCTCGGGCGGCCTTGACCAAGGCGACAGTGAACACAGTCTGAAGTTCCGGCCCAAGACCTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS TCA 90 bp | GCGCCGCCCGGACCTTCGACCCCCAAGCCGCGGATGGCAGCGGATTaGAAGATTCAACCCAAGCTTCTACTTACCGGCAGCAACCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: APPGPSTPKPRMAAD*KIQPKLLLTGSNHP Trigger: CGGGTGGTTGCTGCCGGTAAGTAGAAGCTTGGGTTGAATCTTTCAATCCGCTGCCATCCGCGGCTTGGGGGTCGAAGGTCCGGGCGGCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593262.1 |
||
| CDS-3UTR CAA 90 bp | TGTTCTGTAGTCCCAGCCACTCGAGAGGCTGAGATGGGAGACTCGCTTGAGCCCAGATGGGAGACTCGCTaGAGCCCGGGAGGTCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSVVPATREAEMGDSLEPRWETR*SPGGRG Trigger: GCCTCGACCTCCCGGGCTCAAGCGAGTCTCCCATCT...GGGCTCAAGCGAGTCTCCCATCTCAGCCTCTCGAGTGGCTGGGACTACAGAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590864.2 |
||
| CDS TCA 90 bp | TTCCTGTCCCGCCCTTCAGGCTTTGCCACGCTGATTGTGTGGTGCTaGGTCTCGTGTTGCGGGCGGAAGAAGCTCATGAGGGAAACGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLSRPSGFATLIVWC*VSCCGRKKLMRETQ Trigger: CTGCGTTTCCCTCATGAGCTTCTTCCGCCCGCAACACGAGACTCAGCACCACACAATCAGCGTGGCAAAGCCTGAAGGGCGGGACAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589037.5 |
||
| CDS TCA 90 bp | AGGAGTGACCTCACTTCCTGTCCCGCCCTTCAGGCTTTGCCACGCTaGTTGTGTGGTGCTGAGTCTCGTGTTGCGGGCGGAAGAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSDLTSCPALQALPR*LCGAESRVAGGRSS Trigger: TGAGCTTCTTCCGCCCGCAACACGAGACTCAGCACCACACAATCAGCGTGGCAAAGCCTGAAGGGCGGGACAGGAAGTGAGGTCACTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589037.5 |
||
| CDS CCA 90 bp | AGCCAAAGATGCCCAGAGCTGACTCCTGCCAGCAAGCCCAGGTCTTaGGCCGGAACTTCAGACTGTGTTCACTGTCGCCTTGGTCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQRCPELTPASKPRS*AGTSDCVHCRLGQG Trigger: GCCTTGACCAAGGCGACAGTGAACACAGTCTGAAGTTCCGGCCCAAGACCTGGGCTTGCTGGCAGGAGTCAGCTCTGGGCATCTTTGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS CCA 90 bp | TTCCTCTCTCAAAAACTCTCCCACGTTCACCCTGACCGTGCTCACTaGCTACTGCCCCAGAAACAGGCCTTGAATTCCAAGCCTGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FLSQKLSHVHPDRAH*LLPQKQALNSKPAR Trigger: GCGGGCAGGCTTGGAATTCAAGGCCTGTTTCTGGGGCAGTAGCCAGTGAGCACGGTCAGGGTGAACGTGGGAGAGTTTTTGAGAGAGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000587478.1 ENST00000593262.1 |
||
| CDS TCA 90 bp | AAGGAATCCCCTATGATTACTTCAAGGACTGCACATGACAATACCTaGAAGGCAGTGGGAGCACATAGCAAGCGTGCAATGTCAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: KESPMITSRTAHDNT*KAVGAHSKRAMSAT Trigger: AGTGGCTGACATTGCACGCTTGCTATGTGCTCCCACTGCCTTTCAGGTATTGTCATGTGCAGTCCTTGAAGTAATCATAGGGGATTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587478.1 ENST00000593262.1 |
||
| CDS CCA 90 bp | CATTTAAGAAGTACTTGCTATATGCCAAGCACTGCTCACAGGACTTaGTATCTATTCACTTGCTCCACTGCTAGTGAAGTGTACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HLRSTCYMPSTAHRT*YLFTCSTASEVYSQ Trigger: TTGGCTGTACACTTCACTAGCAGTGGAGCAAGTGAATAGATACCAAGTCCTGTGAGCAGTGCTTGGCATATAGCAAGTACTTCTTAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593262.1 |
||
| CDS GCA 90 bp | GCCACTATTACTATATATTTAAAGCCTCTGGTGGAGAAGGCTTTATaGGTTGGGAGCCCAATTCAGCTCACATTTGCTTTTACTGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ATITIYLKPLVEKAL*VGSPIQLTFAFTVL Trigger: AAGCACAGTAAAAGCAAATGTGAGCTGAATTGGGCTCCCAACGCATAAAGCCTTCTCCACCAGAGGCTTTAAATATATAGTAATAGTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587478.1 ENST00000593262.1 |
||
| CDS CCA 90 bp | TATTACTATATATTTAAAGCCTCTGGTGGAGAAGGCTTTATGCGTTaGGAGCCCAATTCAGCTCACATTTGCTTTTACTGTGCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YYYIFKASGGEGFMR*EPNSAHICFYCASS Trigger: GGAAGAAGCACAGTAAAAGCAAATGTGAGCTGAATTGGGCTCCCAACGCATAAAGCCTTCTCCACCAGAGGCTTTAAATATATAGTAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587478.1 ENST00000593262.1 |
||
| CDS CCA 90 bp | GACCAAAGAGAAACAGAACAGTGTTTATCTCCATCAGGAAGCATCTaGAACGGCTTACTAGAGGTAAGAGATTTAAAAGTAGCAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DQRETEQCLSPSGSI*NGLLEVRDLKVATV Trigger: AACTGTTGCTACTTTTAAATCTCTTACCTCTAGTAAGCCGTTCCAGATGCTTCCTGATGGAGATAAACACTGTTCTGTTTCTCTTTGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593262.1 |
||
| CDS TCA 90 bp | GTCTCCAAGATCCACCATTATAAAGAGAAAAATCACAGAAAGCTATaGGAAATGACCAAAGAGAAACAGAACAGTGTTTATCTCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSKIHHYKEKNHRKL*EMTKEKQNSVYLHQ Trigger: CTGATGGAGATAAACACTGTTCTGTTTCTCTTTGGTCATTTCTCATAGCTTTCTGTGATTTTTCTCTTTATAATGGTGGATCTTGGAGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593262.1 |
||
| CDS GCA 72 bp | ATCGGATACGTAGCCGCCAGAGACCTAGGGAAGGAATaGACCCGGCGCCGCCCGGACCTTCGACCCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: IGYVAARDLGKE*TRRRPDLRPPS Trigger: GCTTGGGGGTCGAAGGTCCGGGCGGCGCCGGGTGCATTCCTTCCCTAGGTCTCTGGCGGCTACGTATCCGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS GCA 72 bp | TTCACTGTCGCCTTGGTCAAGGCCGCCCGAGGGCCCTaGTCGCAGGACAGGATCGGATACGTAGCCGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FTVALVKAARGP*SQDRIGYVAAR Trigger: TCTGGCGGCTACGTATCCGATCCTGTCCTGCGAGCAGGGCCCTCGGGCGGCCTTGACCAAGGCGACAGTGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS CAA 72 bp | CTTGGGCCGGAACTTCAGACTGTGTTCACTGTCGCCTaGGTCAAGGCCGCCCGAGGGCCCTGCTCGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LGPELQTVFTVA*VKAARGPCSQD Trigger: GTCCTGCGAGCAGGGCCCTCGGGCGGCCTTGACCAAGGCGACAGTGAACACAGTCTGAAGTTCCGGCCCAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS CAA 90 bp | AGCCCAGGTCTTGGGCCGGAACTTCAGACTGTGTTCACTGTCGCCTaGGTCAAGGCCGCCCGAGGGCCCTGCTCGCAGGACAGGATCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPGLGPELQTVFTVA*VKAARGPCSQDRIG Trigger: TCCGATCCTGTCCTGCGAGCAGGGCCCTCGGGCGGCCTTGACCAAGGCGACAGTGAACACAGTCTGAAGTTCCGGCCCAAGACCTGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS CCA 72 bp | CGGCGCCGCCCGGACCTTCGACCCCCAAGCCGCGGATaGCAGCGGATTGAAAGATTCAACCCAAGCTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: RRRPDLRPPSRG*QRIERFNPSFY Trigger: GTAGAAGCTTGGGTTGAATCTTTCAATCCGCTGCCATCCGCGGCTTGGGGGTCGAAGGTCCGGGCGGCGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS CCA 72 bp | TTGGGCCGGAACTTCAGACTGTGTTCACTGTCGCCTTaGTCAAGGCCGCCCGAGGGCCCTGCTCGCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: LGRNFRLCSLSP*SRPPEGPARRT Trigger: TGTCCTGCGAGCAGGGCCCTCGGGCGGCCTTGACCAAGGCGACAGTGAACACAGTCTGAAGTTCCGGCCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS CAA 90 bp | GGCGCCGCCCGGACCTTCGACCCCCAAGCCGCGGATGGCAGCGGATaGAAAGATTCAACCCAAGCTTCTACTTACCGGCAGCAACCACCC | + |
|
Preference number: 6 (lower is better) Translates to: GAARTFDPQAADGSG*KDSTQASTYRQQPP Trigger: GGGTGGTTGCTGCCGGTAAGTAGAAGCTTGGGTTGAATCTTTCAATCCGCTGCCATCCGCGGCTTGGGGGTCGAAGGTCCGGGCGGCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593262.1 |
||
| CDS CAA 90 bp | CCCTTCAGGCTTTGCCACGCTGATTGTGTGGTGCTGAGTCTCGTGTaGCGGGCGGAAGAAGCTCATGAGGGAAACGCAGGGCGCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PFRLCHADCVVLSLV*RAEEAHEGNAGRGS Trigger: GCTGCCGCGCCCTGCGTTTCCCTCATGAGCTTCTTCCGCCCGCAACACGAGACTCAGCACCACACAATCAGCGTGGCAAAGCCTGAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589037.5 |
||
| CDS TCA 72 bp | GGTGCTGAGTCTCGTGTTGCGGGCGGAAGAAGCTCATaGGGGAAACGCAGGGCGCGGCAGCTCAAGTATTCG | + |
|
Preference number: 6 (lower is better) Translates to: GAESRVAGGRSS*GKRRARQLKYS Trigger: CGAATACTTGAGCTGCCGCGCCCTGCGTTTCCCTCATGAGCTTCTTCCGCCCGCAACACGAGACTCAGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589037.5 |
||
| CDS TCA 72 bp | CTCACTTCCTGTCCCGCCCTTCAGGCTTTGCCACGCTaGTTGTGTGGTGCTGAGTCTCGTGTTGCGGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LTSCPALQALPR*LCGAESRVAGG Trigger: TCCGCCCGCAACACGAGACTCAGCACCACACAATCAGCGTGGCAAAGCCTGAAGGGCGGGACAGGAAGTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589037.5 |
||
| CDS TCA 72 bp | CGCCCTTCAGGCTTTGCCACGCTGATTGTGTGGTGCTaGGTCTCGTGTTGCGGGCGGAAGAAGCTCATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPSGFATLIVWC*VSCCGRKKLMR Trigger: CCTCATGAGCTTCTTCCGCCCGCAACACGAGACTCAGCACCACACAATCAGCGTGGCAAAGCCTGAAGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589037.5 |
||
| CDS CCA 72 bp | TGCCCAGAGCTGACTCCTGCCAGCAAGCCCAGGTCTTaGGCCGGAACTTCAGACTGTGTTCACTGTCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CPELTPASKPRS*AGTSDCVHCRL Trigger: AAGGCGACAGTGAACACAGTCTGAAGTTCCGGCCCAAGACCTGGGCTTGCTGGCAGGAGTCAGCTCTGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS CAA 72 bp | ATGCCCAGAGCTGACTCCTGCCAGCAAGCCCAGGTCTaGGGCCGGAACTTCAGACTGTGTTCACTGTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: MPRADSCQQAQV*GRNFRLCSLSP Trigger: AGGCGACAGTGAACACAGTCTGAAGTTCCGGCCCAAGACCTGGGCTTGCTGGCAGGAGTCAGCTCTGGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS CAA 90 bp | AAGCCAAAGATGCCCAGAGCTGACTCCTGCCAGCAAGCCCAGGTCTaGGGCCGGAACTTCAGACTGTGTTCACTGTCGCCTTGGTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KPKMPRADSCQQAQV*GRNFRLCSLSPWSR Trigger: CCTTGACCAAGGCGACAGTGAACACAGTCTGAAGTTCCGGCCCAAGACCTGGGCTTGCTGGCAGGAGTCAGCTCTGGGCATCTTTGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS TCA 72 bp | GGACCTTCGACCCCCAAGCCGCGGATGGCAGCGGATTaGAAGATTCAACCCAAGCTTCTACTTACCGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPSTPKPRMAAD*KIQPKLLLTGS Trigger: GCTGCCGGTAAGTAGAAGCTTGGGTTGAATCTTTCAATCCGCTGCCATCCGCGGCTTGGGGGTCGAAGGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593262.1 |
||
| CDS CAA 72 bp | CGGACCTTCGACCCCCAAGCCGCGGATGGCAGCGGATaGAAAGATTCAACCCAAGCTTCTACTTACCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RTFDPQAADGSG*KDSTQASTYRQ Trigger: CTGCCGGTAAGTAGAAGCTTGGGTTGAATCTTTCAATCCGCTGCCATCCGCGGCTTGGGGGTCGAAGGTCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000593262.1 |
||
| CDS CAA 72 bp | CTTTGCCACGCTGATTGTGTGGTGCTGAGTCTCGTGTaGCGGGCGGAAGAAGCTCATGAGGGAAACGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LCHADCVVLSLV*RAEEAHEGNAG Trigger: CCCTGCGTTTCCCTCATGAGCTTCTTCCGCCCGCAACACGAGACTCAGCACCACACAATCAGCGTGGCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589037.5 |
||
| CDS TCA 72 bp | CATGAACTTGCCCATTTCTTTCACCCCGGTGAGGAGTaGCCTCACTTCCTGTCCCGCCCTTCAGGCTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HELAHFFHPGEE*PHFLSRPSGFA Trigger: GGCAAAGCCTGAAGGGCGGGACAGGAAGTGAGGTCACTCCTCACCGGGGTGAAAGAAATGGGCAAGTTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589037.5 |
||
| CDS TCA 72 bp | CTTCTTCCTCTCTCAAAAACTCTCCCACGTTCACCCTaGCCGTGCTCACTGGCTACTGCCCCAGAAACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLPLSKTLPRSP*PCSLATAPETG Trigger: GCCTGTTTCTGGGGCAGTAGCCAGTGAGCACGGTCAGGGTGAACGTGGGAGAGTTTTTGAGAGAGGAAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000587478.1 ENST00000593262.1 |
||
| CDS GCA 72 bp | AAATCCGTAAAGCCAAAGATGCCCAGAGCTGACTCCTaGCAGCAAGCCCAGGTCTTGGGCCGGAACTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: KSVKPKMPRADS*QQAQVLGRNFR Trigger: TCTGAAGTTCCGGCCCAAGACCTGGGCTTGCTGGCAGGAGTCAGCTCTGGGCATCTTTGGCTTTACGGATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589913.6 ENST00000593262.1 |
||
| CDS CCA 72 bp | CAAAAACTCTCCCACGTTCACCCTGACCGTGCTCACTaGCTACTGCCCCAGAAACAGGCCTTGAATTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: QKLSHVHPDRAH*LLPQKQALNSK Trigger: CTTGGAATTCAAGGCCTGTTTCTGGGGCAGTAGCCAGTGAGCACGGTCAGGGTGAACGTGGGAGAGTTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000587478.1 ENST00000593262.1 |
||
| CDS CCA 72 bp | AGTACTTGCTATATGCCAAGCACTGCTCACAGGACTTaGTATCTATTCACTTGCTCCACTGCTAGTGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: STCYMPSTAHRT*YLFTCSTASEV Trigger: CACTTCACTAGCAGTGGAGCAAGTGAATAGATACCAAGTCCTGTGAGCAGTGCTTGGCATATAGCAAGTACT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593262.1 |
||
| CDS GCA 72 bp | TTAACATTTAAGAAGTACTTGCTATATGCCAAGCACTaGTCACAGGACTTGGTATCTATTCACTTGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LTFKKYLLYAKH*SQDLVSIHLLH Trigger: GTGGAGCAAGTGAATAGATACCAAGTCCTGTGAGCAGTGCTTGGCATATAGCAAGTACTTCTTAAATGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000593262.1 |
||
| CDS CCA 72 bp | GAAACAGAACAGTGTTTATCTCCATCAGGAAGCATCTaGAACGGCTTACTAGAGGTAAGAGATTTAAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: ETEQCLSPSGSI*NGLLEVRDLKV Trigger: TACTTTTAAATCTCTTACCTCTAGTAAGCCGTTCCAGATGCTTCCTGATGGAGATAAACACTGTTCTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593262.1 |
||