Pregenerated sensors for RPL18A (Homo sapiens)
Ensembl gene IDs: ENSG00000105640Ensembl transcript IDs: ENST00000597648.5, ENST00000599870.1, ENST00000600147.5, ENST00000600238.1, ENST00000602216.1
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACTCAGCAGGGGAGCCTGGGAGGCCTGTGTCTCACAAGGCAGTTaGGACAGATTTAGGGCCCAGGACAGACAGTACCCCTGCAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: RLSRGAWEACVSQGS*DRFRAQDRQYPCSS Trigger: TGAGCTGCAGGGGTACTGTCTGTCCTGGGCCCTAAATCTGTCCCAACTGCCTTGTGAGACACAGGCCTCCCAGGCTCCCCTGCTGAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR GCA 90 bp | GGCTCCCAGAGCCTGAGCTCTTGGCTGTGTCTCAAACTTCTCCAATaGCAGCTTAGCCTCCACCTGACAGAAGGACTCAGCCAGGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: GSQSLSSWLCLKLLQ*QLSLHLTEGLSQGG Trigger: CCCACCCTGGCTGAGTCCTTCTGTCAGGTGGAGGCTAAGCTGGCATTGGAGAAGTTTGAGACACAGCCAAGAGCTCAGGCTCTGGGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR GCA 90 bp | TGGAGGGCCCACTCCAGGACAGGAGGATGTGAGGGTTTGTTTGTTTaGACTGAAGACCCCTCCCAGGACAAAGAAATGGCAGCTCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: WRAHSRTGGCEGLFV*TEDPSQDKEMAAQL Trigger: CAGCTGAGCTGCCATTTCTTTGTCCTGGGAGGGGTCTTCAGTGCAAACAAACAAACCCTCACATCCTCCTGTCCTGGAGTGGGCCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR CCA 90 bp | AAGGTCACGCAACAAAGGATGGGAGGCTCCCAGAGCCTGAGCTCTTaGCTGTGTCTCAAACTTCTCCAATGCCAGCTTAGCCTCCACCTG | + |
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Preference number: 1 (lower is better) Translates to: KVTQQRMGGSQSLSS*LCLKLLQCQLSLHL Trigger: CAGGTGGAGGCTAAGCTGGCATTGGAGAAGTTTGAGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCCCATCCTTTGTTGCGTGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR TCA 90 bp | CTTGGCTGTGTCTCAAACTTCTCCAATGCCAGCTTAGCCTCCACCTaGCAGAAGGACTCAGCCAGGGTGGGATTAGTGTCATGCCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: LGCVSNFSNASLAST*QKDSARVGLVSCLE Trigger: TTCCAGGCATGACACTAATCCCACCCTGGCTGAGTCCTTCTGTCAGGTGGAGGCTAAGCTGGCATTGGAGAAGTTTGAGACACAGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCCCCAAGCAGCAGAGAGCGCCCCTCGGGTGCCCACTTGTGTCTACTCTGCTGCACCCCAGGAGCTaGCTGGGCCGGCCTCTCATA | + |
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Preference number: 2 (lower is better) Translates to: TAPKQQRAPLGCPLVSTLLHPRS*LGRPLI Trigger: TATGAGAGGCCGGCCCAGTCAGCTCCTGGGGTGCAG...CAGAGTAGACACAAGTGGGCACCCGAGGGGCGCTCTCTGCTGCTTGGGGGCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR CCA 90 bp | TGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTGGCCCAGAGGGGTGGGGGCGCCTaGAGGGCCCACTCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: WNPMLRSRQQAPEGPLAQRGGGA*RAHSRT Trigger: TGTCCTGGAGTGGGCCCTCCAGGCGCCCCCACCCCT...CTGGGCCAGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGTCACGCAACAAAGGATGGGAGGCTCCCAGAGCCTGAGCTCTTGGCTGTGTGAGGGAGCTCAGGGGTaGGGGCGCCTGGAGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: KVTQQRMGGSQSLSSWLCEGAQG*GRLEGP Trigger: TGGGCCCTCCAGGCGCCCCCACCCCTGAGCTCCCTC...ACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCCCATCCTTTGTTGCGTGACCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGCCTGGGAGGCCTGTGTCTCACAAGGCAGTTGGGACAGATTTAGGGCCCAGCAGGGCTGAGAACTaGCCAAGCAAGAGGGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: GEPGRPVSHKAVGTDLGPSRAEN*PSKREL Trigger: GAGCTCCCTCTTGCTTGGTCAGTTCTCAGCCCTGCT...GGGCCCTAAATCTGTCCCAACTGCCTTGTGAGACACAGGCCTCCCAGGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR GCA 90 bp | TGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTGGCCCAGAGAGCGCCCCTCGGGTaGCCACTTGTGTCTACTCTG | + |
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Preference number: 2 (lower is better) Translates to: WNPMLRSRQQAPEGPLAQRAPLG*PLVSTL Trigger: CAGAGTAGACACAAGTGGGCACCCGAGGGGCGCTCT...CTGGGCCAGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCTCCCAGAGCCTGAGCTCTTGGCTGTGTCTCAAACTTCTCCAATGCCAGCTCAGCAGGGGAGCCTaGGAGGCCTGTGTCTCACAA | + |
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Preference number: 2 (lower is better) Translates to: GGSQSLSSWLCLKLLQCQLSRGA*EACVSQ Trigger: TTGTGAGACACAGGCCTCCCAGGCTCCCCTGCTGAG...CTGGCATTGGAGAAGTTTGAGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR CAA 90 bp | AGCACCTGCACAGCGTCACTTCCCACATCAATGTGGAACCCGATGTaGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTGGCCCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: STCTASLPTSMWNPM*RSRQQAPEGPLAQN Trigger: GTTCTGGGCCAGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACATTGATGTGGGAAGTGACGCTGTGCAGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR TCA 90 bp | GTCACGCAACAAAGGATGGGAGGCTCCCAGAGCCTGAGCTCTTGGCTGTGTCTCCACTTGTGTCTACTCTaGAAACTTTGGGAACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VTQQRMGGSQSLSSWLCLHLCLL*KLWEPE Trigger: CTCTGGTTCCCAAAGTTTTCAGAGTAGACACAAGTG...GAGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCCCATCCTTTGTTGCGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR TCA 90 bp | AGTGAACGCCAACCCCACTATCTAGGGAGATTCTCCCTGGTCCAGACTCAGCAGTTTGTTTGTTTGCACTaGAGACCCCTCCCAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: SERQPHYLGRFSLVQTQQFVCLH*RPLPGQ Trigger: TTGTCCTGGGAGGGGTCTTCAGTGCAAACAAACAAA...CTGCTGAGTCTGGACCAGGGAGAATCTCCCTAGATAGTGGGGTTGGCGTTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGAGTGAACGCCAACCCCACTATCTAGGGAGATTCTCCCTGGTCCAGACTCACCCCTTTGAGCTCTaGAGTGTGCAAAGAAAACAT | + |
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Preference number: 2 (lower is better) Translates to: PGSERQPHYLGRFSLVQTHPFEL*SVQRKH Trigger: ATGTTTTCTTTGCACACTGCAGAGCTCAAAGGGGTG...AGTCTGGACCAGGGAGAATCTCCCTAGATAGTGGGGTTGGCGTTCACTCCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR CCA 72 bp | AGGGGAGCCTGGGAGGCCTGTGTCTCACAAGGCAGTTaGGACAGATTTAGGGCCCAGGACAGACAGTACCCC | + |
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Preference number: 3 (lower is better) Translates to: RGAWEACVSQGS*DRFRAQDRQYP Trigger: GGGGTACTGTCTGTCCTGGGCCCTAAATCTGTCCCAACTGCCTTGTGAGACACAGGCCTCCCAGGCTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCTCCCAGAGCCTGAGCTCTTGGCTGTGTCTCAAACTTCTCCAATGCCAGGAGTCCTTGACCTCCTaGGGCAAGATGAGGGCGTCA | + |
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Preference number: 3 (lower is better) Translates to: GGSQSLSSWLCLKLLQCQESLTS*GKMRAS Trigger: TGACGCCCTCATCTTGCCCAAGGAGGTCAAGGACTC...CTGGCATTGGAGAAGTTTGAGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR CAA 90 bp | GCCTGGGAGGCCTGTGTCTCACAAGGCAGTTGGGACAGATTTAGGGCCCAGGACTCTCATAGCACCCCTTaGAGCTCTGCAGTGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: AWEACVSQGSWDRFRAQDSHSTP*SSAVCK Trigger: TTTGCACACTGCAGAGCTCAAAGGGGTGCTATGAGA...GTCCTGGGCCCTAAATCTGTCCCAACTGCCTTGTGAGACACAGGCCTCCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR-3UTR CAA 90 bp | TGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTGGCCCAGGGAGGATGTGAGGGTTaGTTTGTTTGCACTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: WNPMLRSRQQAPEGPLAQGGCEG*FVCTED Trigger: GTCTTCAGTGCAAACAAACAAACCCTCACATCCTCC...CTGGGCCAGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR TCA 72 bp | AGGTCACGCAACAAAGGATGGGAGGCTCCCAGAGCCTaGGCTCTTGGCTGTGTCTCAAACTTCTCCAATGCC | + |
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Preference number: 3 (lower is better) Translates to: RSRNKGWEAPRA*ALGCVSNFSNA Trigger: GGCATTGGAGAAGTTTGAGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCCCATCCTTTGTTGCGTGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR CCA 72 bp | CCCAGCACCTGCACAGCGTCACTTCCCACATCAATGTaGAACCCGATGTTGAGATCAAGACAGCAAGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: PSTCTASLPTSM*NPMLRSRQQAP Trigger: TGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACATTGATGTGGGAAGTGACGCTGTGCAGGTGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR CCA 72 bp | CAACAAAGGATGGGAGGCTCCCAGAGCCTGAGCTCTTaGCTGTGTCTCAAACTTCTCCAATGCCAGCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: QQRMGGSQSLSS*LCLKLLQCQLS Trigger: GCTAAGCTGGCATTGGAGAAGTTTGAGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCCCATCCTTTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR TCA 72 bp | TTTGGGAACCAGAGACTTAGGAGAATCCCCAGGGAGTaGACGCCAACCCCACTATCTAGGGAGATTCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: FGNQRLRRIPRE*TPTPLSREILP Trigger: AGGGAGAATCTCCCTAGATAGTGGGGTTGGCGTTCACTCCCTGGGGATTCTCCTAAGTCTCTGGTTCCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR TCA 72 bp | GTCTCAAACTTCTCCAATGCCAGCTTAGCCTCCACCTaGCAGAAGGACTCAGCCAGGGTGGGATTAGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: VSNFSNASLAST*QKDSARVGLVS Trigger: TGACACTAATCCCACCCTGGCTGAGTCCTTCTGTCAGGTGGAGGCTAAGCTGGCATTGGAGAAGTTTGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR GCA 72 bp | CACTCCAGGACAGGAGGATGTGAGGGTTTGTTTGTTTaGACTGAAGACCCCTCCCAGGACAAAGAAATGGCA | + |
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Preference number: 3 (lower is better) Translates to: HSRTGGCEGLFV*TEDPSQDKEMA Trigger: TGCCATTTCTTTGTCCTGGGAGGGGTCTTCAGTGCAAACAAACAAACCCTCACATCCTCCTGTCCTGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR CCA 90 bp | GGGGAGCCTGGGAGGCCTGTGTCTCACAAGGCAGTTGGGACAGATTTAGGGCCCCCCCAGAAGGGCCGCTaGCCCAGAACAGGGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GEPGRPVSHKAVGTDLGPPQKGR*PRTGLP Trigger: GGGCAGCCCTGTTCTGGGCCAGCGGCCCTTCTGGGG...GGGCCCTAAATCTGTCCCAACTGCCTTGTGAGACACAGGCCTCCCAGGCTCCCC 67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | AAGGGAAACAGCCCCCAAGCAGCAGAGAGCGCCCCTCGGGTGCCCACTTGTGTCAGCTTAGCCTCCACCTaGCAGAAGGACTCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KGNSPQAAESAPRVPTCVSLAST*QKDSAR Trigger: CCTGGCTGAGTCCTTCTGTCAGGTGGAGGCTAAGCT...GACACAAGTGGGCACCCGAGGGGCGCTCTCTGCTGCTTGGGGGCTGTTTCCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR CCA 90 bp | ATCAATGTGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTGAGGGAGCTCAGGGGTaGGGGCGCCTGGAGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: INVEPDVEIKTASPRRAAEGAQG*GRLEGP Trigger: TGGGCCCTCCAGGCGCCCCCACCCCTGAGCTCCCTC...AGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACATTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | ACAGCCCCCAAGCAGCAGAGAGCGCCCCTCGGGTGCCCACTTGTGTCTACTCTGAGAATCCCCAGGGAGTaGACGCCAACCCCACTATCT | + |
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Preference number: 4 (lower is better) Translates to: TAPKQQRAPLGCPLVSTLRIPRE*TPTPLS Trigger: AGATAGTGGGGTTGGCGTTCACTCCCTGGGGATTCT...CAGAGTAGACACAAGTGGGCACCCGAGGGGCGCTCTCTGCTGCTTGGGGGCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | GGGGAGCCTGGGAGGCCTGTGTCTCACAAGGCAGTTGGGACAGATTTAGGGCCCCCTCCTTGGGCAAGATaGGGGCGTCATCTAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: GEPGRPVSHKAVGTDLGPPPWAR*GRHLRG Trigger: GCCTCTTAGATGACGCCCTCATCTTGCCCAAGGAGG...GGGCCCTAAATCTGTCCCAACTGCCTTGTGAGACACAGGCCTCCCAGGCTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR CCA 90 bp | ATCAATGTGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTAGGGGTGGGGGCGCCTaGAGGGCCCACTCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: INVEPDVEIKTASPRRAARGGGA*RAHSRT Trigger: TGTCCTGGAGTGGGCCCTCCAGGCGCCCCCACCCCT...AGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACATTGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | TCAATGTGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTGCTGCACCCCAGGAGCTaGCTGGGCCGGCCTCTCATA | + |
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Preference number: 4 (lower is better) Translates to: SMWNPMLRSRQQAPEGPLLHPRS*LGRPLI Trigger: TATGAGAGGCCGGCCCAGTCAGCTCCTGGGGTGCAG...CAGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACATTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | GGGGAGCCTGGGAGGCCTGTGTCTCACAAGGCAGTTGGGACAGATTTAGGGCCCTGTGGAACCCGATGTTaGGATCAAGACAGCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GEPGRPVSHKAVGTDLGPCGTRC*DQDSKP Trigger: GGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACA...GGGCCCTAAATCTGTCCCAACTGCCTTGTGAGACACAGGCCTCCCAGGCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR GCA 90 bp | GGAGGCTCCCAGAGCCTGAGCTCTTGGCTGTGTCTCAAACTTCTCCAATGCCAGGCTGACCCCAGCACCTaGACAGCGTCACTTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: GGSQSLSSWLCLKLLQCQADPST*TASLPT Trigger: TGTGGGAAGTGACGCTGTGCAGGTGCTGGGGTCAGC...CTGGCATTGGAGAAGTTTGAGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR CCA 90 bp | AAGATGAGGGCGTCATCTAAGAGGCCCCCAACCAGTGAAAGGGAAACAGCCCCCCTCAGCAGGGGAGCCTaGGAGGCCTGTGTCTCACAA | + |
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Preference number: 4 (lower is better) Translates to: KMRASSKRPPTSERETAPLSRGA*EACVSQ Trigger: TTGTGAGACACAGGCCTCCCAGGCTCCCCTGCTGAG...GGGGGCTGTTTCCCTTTCACTGGTTGGGGGCCTCTTAGATGACGCCCTCATCTT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | TCAATGTGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTGGGCTGCCAGCAGGGCTaGGAACTGACCAAGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SMWNPMLRSRQQAPEGPLGCQQG*ELTKQE Trigger: CTCTTGCTTGGTCAGTTCTCAGCCCTGCTGGCAGCC...CAGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACATTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR GCA 90 bp | GGTCACGCAACAAAGGATGGGAGGCTCCCAGAGCCTGAGCTCTTGGCTGTGTCTTGTGCAAAGAAAACATaGGGCGAGCACCGGGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: GHATKDGRLPEPELLAVSCAKKT*GEHRGV Trigger: AACGCCCCGGTGCTCGCCGCATGTTTTCTTTGCACA...AGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCCCATCCTTTGTTGCGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR GCA 90 bp | CCCAGCACCTGCACAGCGTCACTTCCCACATCAATGTGGAACCCGATGTTGAGAAGAGCGCCCCTCGGGTaGCCACTTGTGTCTACTCTG | + |
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Preference number: 4 (lower is better) Translates to: PSTCTASLPTSMWNPMLRRAPLG*PLVSTL Trigger: CAGAGTAGACACAAGTGGGCACCCGAGGGGCGCTCT...TCTCAACATCGGGTTCCACATTGATGTGGGAAGTGACGCTGTGCAGGTGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR CAA 72 bp | CAGGAGCTGACTGGGCCGGCCTCTCATAGCACCCCTTaGAGCTCTGCAGTGTGCAAAGAAAACATGCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: QELTGPASHSTP*SSAVCKENMRR Trigger: TCGCCGCATGTTTTCTTTGCACACTGCAGAGCTCAAAGGGGTGCTATGAGAGGCCGGCCCAGTCAGCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | GAGCTCTGCAGTGTGCAAAGAAAACATGCGGCGAGCACCGGGGCGTTCCTGAGTCTCATAGCACCCCTTTaGGCTCTGCAGTGTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ELCSVQRKHAASTGAFLSLIAPL*ALQCAK Trigger: CTTTGCACACTGCAGAGCTCAAAGGGGTGCTATGAG...ACTCAGGAACGCCCCGGTGCTCGCCGCATGTTTTCTTTGCACACTGCAGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR CAA 72 bp | CCAGAGATGAGTACCTGTGGTGAGTCCTTGACCTCCTaGGGCAAGATGAGGGCGTCATCTAAGAGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PEMSTCGESLTS*GKMRASSKRPP Trigger: TGGGGGCCTCTTAGATGACGCCCTCATCTTGCCCAAGGAGGTCAAGGACTCACCACAGGTACTCATCTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | TTGGGCAAGATGAGGGCGTCATCTAAGAGGCCCCCAACCAGTGAAAGGGAAACAAGCAGGGCTGAGAACTaGCCAAGCAAGAGGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LGKMRASSKRPPTSERETSRAEN*PSKREL Trigger: GAGCTCCCTCTTGCTTGGTCAGTTCTCAGCCCTGCT...TGTTTCCCTTTCACTGGTTGGGGGCCTCTTAGATGACGCCCTCATCTTGCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| 3UTR CAA 72 bp | ACAGCGTCACTTCCCACATCAATGTGGAACCCGATGTaGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: TASLPTSMWNPM*RSRQQAPEGPL Trigger: CAGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACATTGATGTGGGAAGTGACGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | GTCACGCAACAAAGGATGGGAGGCTCCCAGAGCCTGAGCTCTTGGCTGTGTCTCTTTGTTTGTTTGCACTaGAGACCCCTCCCAGGACAA | + |
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Preference number: 4 (lower is better) Translates to: VTQQRMGGSQSLSSWLCLFVCLH*RPLPGQ Trigger: TTGTCCTGGGAGGGGTCTTCAGTGCAAACAAACAAA...GAGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCCCATCCTTTGTTGCGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | ATCAATGTGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTGATGAGTACCTGTGGTaGGTCCTTGACCTCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: INVEPDVEIKTASPRRAADEYLW*VLDLLG Trigger: CCCAAGGAGGTCAAGGACTCACCACAGGTACTCATC...AGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACATTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR TCA 90 bp | GAGCTCTGCAGTGTGCAAAGAAAACATGCGGCGAGCACCGGGGCGTTCCTGAGTCACTTGTGTCTACTCTaGAAACTTTGGGAACCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ELCSVQRKHAASTGAFLSHLCLL*KLWEPE Trigger: CTCTGGTTCCCAAAGTTTTCAGAGTAGACACAAGTG...ACTCAGGAACGCCCCGGTGCTCGCCGCATGTTTTCTTTGCACACTGCAGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR GCA 90 bp | CCCAGCACCTGCACAGCGTCACTTCCCACATCAATGTGGAACCCGATGTTGAGAGAGGGTTTGTTTGTTTaGACTGAAGACCCCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSTCTASLPTSMWNPMLREGLFV*TEDPSQ Trigger: CTGGGAGGGGTCTTCAGTGCAAACAAACAAACCCTC...TCTCAACATCGGGTTCCACATTGATGTGGGAAGTGACGCTGTGCAGGTGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR CCA 90 bp | GGTCACGCAACAAAGGATGGGAGGCTCCCAGAGCCTGAGCTCTTGGCTGTGTCTCTTCCCACATCAATGTaGAACCCGATGTTGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: GHATKDGRLPEPELLAVSLPTSM*NPMLRS Trigger: TGATCTCAACATCGGGTTCCACATTGATGTGGGAAG...AGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCCCATCCTTTGTTGCGTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR CCA 90 bp | AGCTCTTGGCTGTGTCTCAAACTTCTCCAATGCCAGCTTAGCCTCCACCTGACAGTCTCACAAGGCAGTTaGGACAGATTTAGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SSWLCLKLLQCQLSLHLTVSQGS*DRFRAQ Trigger: CTGGGCCCTAAATCTGTCCCAACTGCCTTGTGAGAC...TGTCAGGTGGAGGCTAAGCTGGCATTGGAGAAGTTTGAGACACAGCCAAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR GCA 90 bp | TCAATGTGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTGCACCCCTTTGAGCTCTaGAGTGTGCAAAGAAAACAT | + |
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Preference number: 4 (lower is better) Translates to: SMWNPMLRSRQQAPEGPLHPFEL*SVQRKH Trigger: ATGTTTTCTTTGCACACTGCAGAGCTCAAAGGGGTG...CAGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS CCA 90 bp | GCTGCGCGACTTATTCCTTCCCCCGGGAAGAAGACCCGGAGTCCTTaGGCCCCCGCGATCCCTGAGCTGGCCCAGGTCACGCATCGCTCT | + |
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Preference number: 5 (lower is better) Translates to: AARLIPSPGKKTRSP*APAIPELAQVTHRS Trigger: AGAGCGATGCGTGACCTGGGCCAGCTCAGGGATCGCGGGGGCCCAAGGACTCCGGGTCTTCTTCCCGGGGGAAGGAATAAGTCGCGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000597648.5 |
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| CDS CCA 90 bp | TCACAGCAACTGCCTGAGGGCTCGGGGCTCACGGGAAGGTGGTGGTaGGGAAGCGAGATAGCCCAAGGCCTGGGTCCCTGCAGTCACTGG | + |
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Preference number: 5 (lower is better) Translates to: SQQLPEGSGLTGRWW*GSEIAQGLGPCSHW Trigger: CCAGTGACTGCAGGGACCCAGGCCTTGGGCTATCTCGCTTCCCCACCACCACCTTCCCGTGAGCCCCGAGCCCTCAGGCAGTTGCTGTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600238.1 |
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| CDS CCA 90 bp | TGGTCACAGCAACTGCCTGAGGGCTCGGGGCTCACGGGAAGGTGGTaGTGGGGAAGCGAGATAGCCCAAGGCCTGGGTCCCTGCAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: WSQQLPEGSGLTGRW*WGSEIAQGLGPCSH Trigger: GTGACTGCAGGGACCCAGGCCTTGGGCTATCTCGCTTCCCCACCACCACCTTCCCGTGAGCCCCGAGCCCTCAGGCAGTTGCTGTGACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600238.1 |
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| CDS GCA 90 bp | GAAACTTGGCGGCTCGACGAGGTGCCGGGGCTAGGGCCTCTATGCTaGGCGACTTATTCCTTCCCCCGGGAAGAAGACCCGGAGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ETWRLDEVPGLGPLC*ATYSFPREEDPESL Trigger: CAAGGACTCCGGGTCTTCTTCCCGGGGGAAGGAATAAGTCGCGCAGCATAGAGGCCCTAGCCCCGGCACCTCGTCGAGCCGCCAAGTTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597648.5 |
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| CDS GCA 90 bp | ACAGAAACTTGGCGGCTCGACGAGGTGCCGGGGCTAGGGCCTCTATaGTGCGCGACTTATTCCTTCCCCCGGGAAGAAGACCCGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: TETWRLDEVPGLGPL*CATYSFPREEDPES Trigger: GGACTCCGGGTCTTCTTCCCGGGGGAAGGAATAAGTCGCGCAGCATAGAGGCCCTAGCCCCGGCACCTCGTCGAGCCGCCAAGTTTCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597648.5 |
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| CDS GCA 90 bp | AGAACTAGGACAAGACCTCAGGTCTCTCCCCAGCCCTGGGATCCCTaGACTGTTGCCACGCGAGCTGCGGCTGCCTCCGTTTTCCCAACT | + |
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Preference number: 5 (lower is better) Translates to: RTRTRPQVSPQPWDP*TVATRAAAASVFPT Trigger: AGTTGGGAAAACGGAGGCAGCCGCAGCTCGCGTGGCAACAGTGCAGGGATCCCAGGGCTGGGGAGAGACCTGAGGTCTTGTCCTAGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS-3UTR CAA 90 bp | CCCAGGACAAAGAAATGGCAGCTCAGCTGCACCCCAGGAGCTGACTGGGCCGGCACCTGTGGTGAGTCCTaGACCTCCTTGGGCAAGATG | + |
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Preference number: 5 (lower is better) Translates to: PRTKKWQLSCTPGADWAGTCGES*TSLGKM Trigger: CATCTTGCCCAAGGAGGTCAAGGACTCACCACAGGT...GCCGGCCCAGTCAGCTCCTGGGGTGCAGCTGAGCTGCCATTTCTTTGTCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR CAA 90 bp | TGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGGCCGCTGGCCCAGGAGTCCTTGACCTCCTaGGGCAAGATGAGGGCGTCA | + |
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Preference number: 5 (lower is better) Translates to: WNPMLRSRQQAPEGPLAQESLTS*GKMRAS Trigger: TGACGCCCTCATCTTGCCCAAGGAGGTCAAGGACTC...CTGGGCCAGCGGCCCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS GCA 90 bp | CCCTGGGTCCCTGGCTTTCTAATCAGGGAAATGGCACATAAGCTCTaGTCCAGTCCCGTGACCCAGGCAGAAACACAACCCGGGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: PWVPGFLIREMAHKL*SSPVTQAETQPGAL Trigger: CAGAGCCCCGGGTTGTGTTTCTGCCTGGGTCACGGGACTGGAGCAGAGCTTATGTGCCATTTCCCTGATTAGAAAGCCAGGGACCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602216.1 |
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| CDS CCA 90 bp | GACAGCACCAACCAAGGTGTCCCACCATGCCACCCACCCGCTCCCTaGGTCCCTGGCTTTCTAATCAGGGAAATGGCACATAAGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: DSTNQGVPPCHPPAP*VPGFLIREMAHKLC Trigger: GCAGAGCTTATGTGCCATTTCCCTGATTAGAAAGCCAGGGACCCAGGGAGCGGGTGGGTGGCATGGTGGGACACCTTGGTTGGTGCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602216.1 |
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| CDS TCA 90 bp | CTCAGTTTCCCAGCCCCACCTACCTTCAGGCATCCTCAGGGAGCGTaGGGTAAGGGAACTTCCCATGGCAACAGCCTGAAGTCCAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LSFPAPPTFRHPQGA*GKGTSHGNSLKSRL Trigger: AAGCCTGGACTTCAGGCTGTTGCCATGGGAAGTTCCCTTACCTCACGCTCCCTGAGGATGCCTGAAGGTAGGTGGGGCTGGGAAACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602216.1 |
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| CDS-3UTR CAA 90 bp | CCCAGGACAAAGAAATGGCAGCTCAGCTGCACCCCAGGAGCTGACTGGGCCGGCGGAGGATGTGAGGGTTaGTTTGTTTGCACTGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: PRTKKWQLSCTPGADWAGGGCEG*FVCTED Trigger: GTCTTCAGTGCAAACAAACAAACCCTCACATCCTCC...GCCGGCCCAGTCAGCTCCTGGGGTGCAGCTGAGCTGCCATTTCTTTGTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS TCA 90 bp | GCCACTCTGCACCTCAAAACATCCAGCCAACATCTTCTTTCACCCTaGGGCCCAGTGACCAGCATGGGATCTCACAGCCCATTCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: ATLHLKTSSQHLLSP*GPVTSMGSHSPFQA Trigger: TGCCTGGAATGGGCTGTGAGATCCCATGCTGGTCACTGGGCCTCAGGGTGAAAGAAGATGTTGGCTGGATGTTTTGAGGTGCAGAGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS TCA 90 bp | TCAAGTCTCCTGGAACCTGTCTGGGCCAACCTAGCTACCACCCACTaGCCAGATAGCCATCACCTCTCCTCACTTAACAGACAGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: SSLLEPVWANLATTH*PDSHHLSSLNRQGP Trigger: TGGGCCCTGTCTGTTAAGTGAGGAGAGGTGATGGCTATCTGGTCAGTGGGTGGTAGCTAGGTTGGCCCAGACAGGTTCCAGGAGACTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602216.1 |
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| CDS CCA 90 bp | ACAGATTCGGGAAGCAGGAGGCAGGGCCACCCTAGGGCCTCCATGTaGATTCTTGGTGACTGTAGGTCACACTCCCGACCACAACTTTAT | + |
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Preference number: 5 (lower is better) Translates to: TDSGSRRQGHPRASM*ILGDCRSHSRPQLY Trigger: ATAAAGTTGTGGTCGGGAGTGTGACCTACAGTCACCAAGAATCCACATGGAGGCCCTAGGGTGGCCCTGCCTCCTGCTTCCCGAATCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGTGAACGCCAACCCCACTATCTAGGGAGATTCTCCCTGGTCCAGACTCCAGAGCCTGAGCTCTaGGCTGTGTCTCAAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: PGSERQPHYLGRFSLVQTPEPEL*AVSQTS Trigger: AGAAGTTTGAGACACAGCCAAGAGCTCAGGCTCTGG...AGTCTGGACCAGGGAGAATCTCCCTAGATAGTGGGGTTGGCGTTCACTCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS-3UTR CAA 90 bp | GTCACGCAACAAAGGATGGGAGGCTCCCAGAGCCTGAGCTCTTGGCTGTGTCTCATGTGGAACCCGATGTaGAGATCAAGACAGCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: VTQQRMGGSQSLSSWLCLMWNPM*RSRQQA Trigger: GGCTTGCTGTCTTGATCTCAACATCGGGTTCCACAT...GAGACACAGCCAAGAGCTCAGGCTCTGGGAGCCTCCCATCCTTTGTTGCGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS TCA 90 bp | AGCTGTGGCTTAGACCCACAGCCTCCTTTCTTCATGCTGCAGTCCTaGATTGCTTTGCAGTCGCCGTCAAACAGCCACTCTGCACCTCAA | + |
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Preference number: 5 (lower is better) Translates to: SCGLDPQPPFFMLQS*IALQSPSNSHSAPQ Trigger: TTGAGGTGCAGAGTGGCTGTTTGACGGCGACTGCAAAGCAATTCAGGACTGCAGCATGAAGAAAGGAGGCTGTGGGTCTAAGCCACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS GCA 90 bp | GCTGCAGTCCTGAATTGCTTTGCAGTCGCCGTCAAACAGCCACTCTaGACCTCAAAACATCCAGCCAACATCTTCTTTCACCCTGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: AAVLNCFAVAVKQPL*TSKHPANIFFHPEA Trigger: GGCCTCAGGGTGAAAGAAGATGTTGGCTGGATGTTTTGAGGTGCAGAGTGGCTGTTTGACGGCGACTGCAAAGCAATTCAGGACTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS CCA 90 bp | TGCCTCTCCTTTGCCTGGGCTAAGGGTTTCAGACCAGGAAAGCTGTaGCTTAGACCCACAGCCTCCTTTCTTCATGCTGCAGTCCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: CLSFAWAKGFRPGKL*LRPTASFLHAAVLN Trigger: ATTCAGGACTGCAGCATGAAGAAAGGAGGCTGTGGGTCTAAGCCACAGCTTTCCTGGTCTGAAACCCTTAGCCCAGGCAAAGGAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS CCA 90 bp | AAAGGAAACAGGAGTGAGGGTAAGGCCAGCACCCAGAGGCAACTGTaGAGATCCACCTCACTCCCTTTCCTACATCTAGTGACCACAGAT | + |
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Preference number: 5 (lower is better) Translates to: KGNRSEGKASTQRQL*RSTSLPFLHLVTTD Trigger: ATCTGTGGTCACTAGATGTAGGAAAGGGAGTGAGGTGGATCTCCACAGTTGCCTCTGGGTGCTGGCCTTACCCTCACTCCTGTTTCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS TCA 90 bp | ACACAAAATGAACTGAGGAGAGGGAGGTCTCCAGGGAGGATTAATTaGGTTGCCTGCCTCTCCTTTGCCTGGGCTAAGGGTTTCAGACCA | + |
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Preference number: 5 (lower is better) Translates to: TQNELRRGRSPGRIN*VACLSFAWAKGFRP Trigger: TGGTCTGAAACCCTTAGCCCAGGCAAAGGAGAGGCAGGCAACTCAATTAATCCTCCCTGGAGACCTCCCTCTCCTCAGTTCATTTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS TCA 90 bp | CCCAGTCTAAACAAGGTGCAGACCCAAAAAGGGAGTTTCCAGATGTaGTGTGATTTACAACCGAGCCTGGCAGGGCTCTCAGAAAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PSLNKVQTQKGSFQM*CDLQPSLAGLSEKR Trigger: GCGCTTTTCTGAGAGCCCTGCCAGGCTCGGTTGTAAATCACATCACATCTGGAAACTCCCTTTTTGGGTCTGCACCTTGTTTAGACTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600238.1 |
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| CDS GCA 90 bp | TGGCTTAGACCCACAGCCTCCTTTCTTCATGCTGCAGTCCTGAATTaGTTTGCAGTCGCCGTCAAACAGCCACTCTGCACCTCAAAACAT | + |
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Preference number: 5 (lower is better) Translates to: WLRPTASFLHAAVLN*FAVAVKQPLCTSKH Trigger: ATGTTTTGAGGTGCAGAGTGGCTGTTTGACGGCGACTGCAAAGCAATTCAGGACTGCAGCATGAAGAAAGGAGGCTGTGGGTCTAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS-3UTR CAA 90 bp | TCCCACATCAATGTGGAACCCGATGTTGAGATCAAGACAGCAAGCCCCAGAAGGTCTCATAGCACCCCTTaGAGCTCTGCAGTGTGCAAA | + |
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Preference number: 5 (lower is better) Translates to: SHINVEPDVEIKTASPRRSHSTP*SSAVCK Trigger: TTTGCACACTGCAGAGCTCAAAGGGGTGCTATGAGA...CCTTCTGGGGCTTGCTGTCTTGATCTCAACATCGGGTTCCACATTGATGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600147.5 |
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| CDS TCA 90 bp | TCTAAACAAGGTGCAGACCCAAAAAGGGAGTTTCCAGATGTGATGTaGTTTACAACCGAGCCTGGCAGGGCTCTCAGAAAAGCGCCATCT | + |
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Preference number: 5 (lower is better) Translates to: SKQGADPKREFPDVM*FTTEPGRALRKAPS Trigger: AGATGGCGCTTTTCTGAGAGCCCTGCCAGGCTCGGTTGTAAATCACATCACATCTGGAAACTCCCTTTTTGGGTCTGCACCTTGTTTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000600238.1 |
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| CDS TCA 72 bp | GAAGAAGACCCGGAGTCCTTGGGCCCCCGCGATCCCTaGGCTGGCCCAGGTCACGCATCGCTCTCTCCACGC | + |
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Preference number: 6 (lower is better) Translates to: EEDPESLGPRDP*AGPGHASLSPR Trigger: GCGTGGAGAGAGCGATGCGTGACCTGGGCCAGCTCAGGGATCGCGGGGGCCCAAGGACTCCGGGTCTTCTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000597648.5 |
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| CDS CCA 72 bp | CTTATTCCTTCCCCCGGGAAGAAGACCCGGAGTCCTTaGGCCCCCGCGATCCCTGAGCTGGCCCAGGTCACG | + |
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Preference number: 6 (lower is better) Translates to: LIPSPGKKTRSP*APAIPELAQVT Trigger: CGTGACCTGGGCCAGCTCAGGGATCGCGGGGGCCCAAGGACTCCGGGTCTTCTTCCCGGGGGAAGGAATAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000597648.5 |
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| CDS GCA 72 bp | ACAAGACCTCAGGTCTCTCCCCAGCCCTGGGATCCCTaGACTGTTGCCACGCGAGCTGCGGCTGCCTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: TRPQVSPQPWDP*TVATRAAAASV Trigger: AACGGAGGCAGCCGCAGCTCGCGTGGCAACAGTGCAGGGATCCCAGGGCTGGGGAGAGACCTGAGGTCTTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS CAA 90 bp | ACTCTCGTAGCGCCACGTCCACGTTGCAGAAAGGAAAACAGAAACTaGGCGGCTCGACGAGGTGCCGGGGCTAGGGCCTCTATGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: TLVAPRPRCRKENRN*AARRGAGARASMLR Trigger: GCGCAGCATAGAGGCCCTAGCCCCGGCACCTCGTCGAGCCGCCAAGTTTCTGTTTTCCTTTCTGCAACGTGGACGTGGCGCTACGAGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597648.5 |
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| CDS CCA 72 bp | GGAAGCAGGAGGCAGGGCCACCCTAGGGCCTCCATGTaGATTCTTGGTGACTGTAGGTCACACTCCCGACCA | + |
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Preference number: 6 (lower is better) Translates to: GSRRQGHPRASM*ILGDCRSHSRP Trigger: TGGTCGGGAGTGTGACCTACAGTCACCAAGAATCCACATGGAGGCCCTAGGGTGGCCCTGCCTCCTGCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS CCA 72 bp | CCACCAGTCCTGAGACTCTCCTGCACTGGGAACCTCTaGCACTTGCCCTGCCTCAGTGTGAGGGAGTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PPVLRLSCTGNL*HLPCLSVRESR Trigger: CCTTGACTCCCTCACACTGAGGCAGGGCAAGTGCCAGAGGTTCCCAGTGCAGGAGAGTCTCAGGACTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600238.1 |
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| CDS TCA 72 bp | CCAGCCCCACCTACCTTCAGGCATCCTCAGGGAGCGTaGGGTAAGGGAACTTCCCATGGCAACAGCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PAPPTFRHPQGA*GKGTSHGNSLK Trigger: CTTCAGGCTGTTGCCATGGGAAGTTCCCTTACCTCACGCTCCCTGAGGATGCCTGAAGGTAGGTGGGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602216.1 |
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| CDS GCA 72 bp | GTCTCACAGACCCTGGCAGGTGAGCCAGGGAAAAGGTaGCAGCTCCCAACACTAGGCAGGGGTTCAATTCGG | + |
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Preference number: 6 (lower is better) Translates to: VSQTLAGEPGKR*QLPTLGRGSIR Trigger: CCGAATTGAACCCCTGCCTAGTGTTGGGAGCTGGCACCTTTTCCCTGGCTCACCTGCCAGGGTCTGTGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600238.1 |
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| CDS CAA 90 bp | TCTAAAGCACACCCCAGGCTCCAGGCCTACTCTATGGCCAGACTCTaGTGCCTCAGTTTCCCAGCCCCACCTACCTTCAGGCATCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SKAHPRLQAYSMARL*CLSFPAPPTFRHPQ Trigger: CTGAGGATGCCTGAAGGTAGGTGGGGCTGGGAAACTGAGGCACAAGAGTCTGGCCATAGAGTAGGCCTGGAGCCTGGGGTGTGCTTTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602216.1 |
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| CDS CAA 72 bp | GGAGGCAGGGCCACCCTAGGGCCTCCATGTGGATTCTaGGTGACTGTAGGTCACACTCCCGACCACAACTTT | + |
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Preference number: 6 (lower is better) Translates to: GGRATLGPPCGF*VTVGHTPDHNF Trigger: AAAGTTGTGGTCGGGAGTGTGACCTACAGTCACCAAGAATCCACATGGAGGCCCTAGGGTGGCCCTGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS TCA 72 bp | CATCCAGCCAACATCTTCTTTCACCCTGAGGCCCAGTaGCCAGCATGGGATCTCACAGCCCATTCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HPANIFFHPEAQ*PAWDLTAHSRQ Trigger: CTGCCTGGAATGGGCTGTGAGATCCCATGCTGGTCACTGGGCCTCAGGGTGAAAGAAGATGTTGGCTGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS CAA 90 bp | CGGGAAGCAGGAGGCAGGGCCACCCTAGGGCCTCCATGTGGATTCTaGGTGACTGTAGGTCACACTCCCGACCACAACTTTATACACAAA | + |
|
Preference number: 6 (lower is better) Translates to: REAGGRATLGPPCGF*VTVGHTPDHNFIHK Trigger: TTTGTGTATAAAGTTGTGGTCGGGAGTGTGACCTACAGTCACCAAGAATCCACATGGAGGCCCTAGGGTGGCCCTGCCTCCTGCTTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS GCA 72 bp | CCCACAGCCTCCTTTCTTCATGCTGCAGTCCTGAATTaGTTTGCAGTCGCCGTCAAACAGCCACTCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PTASFLHAAVLN*FAVAVKQPLCT Trigger: GGTGCAGAGTGGCTGTTTGACGGCGACTGCAAAGCAATTCAGGACTGCAGCATGAAGAAAGGAGGCTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS CCA 72 bp | AGGAGTGAGGGTAAGGCCAGCACCCAGAGGCAACTGTaGAGATCCACCTCACTCCCTTTCCTACATCTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSEGKASTQRQL*RSTSLPFLHLV Trigger: CACTAGATGTAGGAAAGGGAGTGAGGTGGATCTCCACAGTTGCCTCTGGGTGCTGGCCTTACCCTCACTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS CCA 72 bp | GGAGTTTCCAGATGTGATGTGATTTACAACCGAGCCTaGCAGGGCTCTCAGAAAAGCGCCATCTGGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVSRCDVIYNRA*QGSQKSAIWGL Trigger: CAGGCCCCAGATGGCGCTTTTCTGAGAGCCCTGCCAGGCTCGGTTGTAAATCACATCACATCTGGAAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000600238.1 |
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| CDS CAA 90 bp | GAGGGAGGTCTCCAGGGAGGATTAATTGAGTTGCCTGCCTCTCCTTaGCCTGGGCTAAGGGTTTCAGACCAGGAAAGCTGTGGCTTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: EGGLQGGLIELPASP*PGLRVSDQESCGLD Trigger: GTCTAAGCCACAGCTTTCCTGGTCTGAAACCCTTAGCCCAGGCAAAGGAGAGGCAGGCAACTCAATTAATCCTCCCTGGAGACCTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS TCA 72 bp | CACCTCAAAACATCCAGCCAACATCTTCTTTCACCCTaGGGCCCAGTGACCAGCATGGGATCTCACAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HLKTSSQHLLSP*GPVTSMGSHSP Trigger: TGGGCTGTGAGATCCCATGCTGGTCACTGGGCCTCAGGGTGAAAGAAGATGTTGGCTGGATGTTTTGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS TCA 72 bp | CTGGAACCTGTCTGGGCCAACCTAGCTACCACCCACTaGCCAGATAGCCATCACCTCTCCTCACTTAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: LEPVWANLATTH*PDSHHLSSLNR Trigger: TCTGTTAAGTGAGGAGAGGTGATGGCTATCTGGTCAGTGGGTGGTAGCTAGGTTGGCCCAGACAGGTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602216.1 |
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| CDS GCA 72 bp | CCTGGCTTTCTAATCAGGGAAATGGCACATAAGCTCTaGTCCAGTCCCGTGACCCAGGCAGAAACACAACCC | + |
|
Preference number: 6 (lower is better) Translates to: PGFLIREMAHKL*SSPVTQAETQP Trigger: GGGTTGTGTTTCTGCCTGGGTCACGGGACTGGAGCAGAGCTTATGTGCCATTTCCCTGATTAGAAAGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602216.1 |
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| CDS GCA 72 bp | CCACTACCTTGTACTCTCGTAGCGCCACGTCCACGTTaGAGAAAGGAAAACAGAAACTTGGCGGCTCGACGA | + |
|
Preference number: 6 (lower is better) Translates to: PLPCTLVAPRPR*RKENRNLAARR Trigger: TCGTCGAGCCGCCAAGTTTCTGTTTTCCTTTCTGCAACGTGGACGTGGCGCTACGAGAGTACAAGGTAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597648.5 |
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| CDS CAA 72 bp | ACCCACAGCCTCCTTTCTTCATGCTGCAGTCCTGAATaGCTTTGCAGTCGCCGTCAAACAGCCACTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: THSLLSSCCSPE*LCSRRQTATLH Trigger: GTGCAGAGTGGCTGTTTGACGGCGACTGCAAAGCAATTCAGGACTGCAGCATGAAGAAAGGAGGCTGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS CCA 72 bp | TTTGCCTGGGCTAAGGGTTTCAGACCAGGAAAGCTGTaGCTTAGACCCACAGCCTCCTTTCTTCATGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: FAWAKGFRPGKL*LRPTASFLHAA Trigger: TGCAGCATGAAGAAAGGAGGCTGTGGGTCTAAGCCACAGCTTTCCTGGTCTGAAACCCTTAGCCCAGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS CAA 72 bp | CTCCAGGGAGGATTAATTGAGTTGCCTGCCTCTCCTTaGCCTGGGCTAAGGGTTTCAGACCAGGAAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: LQGGLIELPASP*PGLRVSDQESC Trigger: ACAGCTTTCCTGGTCTGAAACCCTTAGCCCAGGCAAAGGAGAGGCAGGCAACTCAATTAATCCTCCCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS GCA 72 bp | AGCCTCCTTTCTTCATGCTGCAGTCCTGAATTGCTTTaGAGTCGCCGTCAAACAGCCACTCTGCACCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: SLLSSCCSPELL*SRRQTATLHLK Trigger: TTTGAGGTGCAGAGTGGCTGTTTGACGGCGACTGCAAAGCAATTCAGGACTGCAGCATGAAGAAAGGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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| CDS TCA 72 bp | ATTACAGGCGTTGAGCTACCGCACCCGTTCGATGTCTaGTTAATTCTTGAGATGCACGATGTCCCAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ITGVELPHPFDV*LILEMHDVPRG Trigger: GCCTCTTGGGACATCGTGCATCTCAAGAATTAATCAGACATCGAACGGGTGCGGTAGCTCAACGCCTGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602216.1 |
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| CDS TCA 72 bp | TCAATTCGGTTCTCAGTGGGTCCCAGAAAACAGTGGTaGTGTGGATCCCAGTCTAAACAAGGTGCAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: SIRFSVGPRKQW*CGSQSKQGADP Trigger: TGGGTCTGCACCTTGTTTAGACTGGGATCCACATCACCACTGTTTTCTGGGACCCACTGAGAACCGAATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600238.1 |
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| CDS GCA 72 bp | CTGAATTGCTTTGCAGTCGCCGTCAAACAGCCACTCTaGACCTCAAAACATCCAGCCAACATCTTCTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: LNCFAVAVKQPL*TSKHPANIFFH Trigger: GTGAAAGAAGATGTTGGCTGGATGTTTTGAGGTGCAGAGTGGCTGTTTGACGGCGACTGCAAAGCAATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599870.1 |
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