RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPGRIP1L (Homo sapiens)

Ensembl gene IDs: ENSG00000103494

Ensembl transcript IDs: ENST00000262135.9, ENST00000562230.5, ENST00000562588.5, ENST00000563746.5, ENST00000564374.5, ENST00000565343.2, ENST00000566096.5, ENST00000568009.1, ENST00000568653.7, ENST00000569716.1, ENST00000621565.5, ENST00000647211.2, ENST00000679110.1, ENST00000680193.1, ENST00000680907.1, ENST00000681587.1

Found 1152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCACTGCTaGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGC +
Preference number: 1 (lower is better)
Translates to: HQQHLKLVSVWQGHC*WPLTPSPLQWIQFG
Trigger: GCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 90 bp GTGAGCCACGCCAATGTCCTCACACTCCAGGTCCTGCTCGTCCTCTaGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTATTAGGCAT +
Preference number: 1 (lower is better)
Translates to: VSHANVLTLQVLLVL*RVTDHGEAKASIRH
Trigger: ATGCCTAATAGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGAGGACATTGGCGTGGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR TCA 90 bp ACCTTAAGCTGGTATCTGTGTGGCAAGGCCACTGCTGGTGGCCCCTaGCGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAG +
Preference number: 1 (lower is better)
Translates to: TLSWYLCGKATAGGP*RQALFNGSSLAHQE
Trigger: CTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACACAGATACCAGCTTAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 90 bp CAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCACTGCTGGTaGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCA +
Preference number: 1 (lower is better)
Translates to: QQHLKLVSVWQGHCW*PLTPSPLQWIQFGS
Trigger: TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR GCA 90 bp TCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCACTaGTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTT +
Preference number: 1 (lower is better)
Translates to: SHQQHLKLVSVWQGH*WWPLTPSPLQWIQF
Trigger: AAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 90 bp TGGCAAGGCCACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATaGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACC +
Preference number: 1 (lower is better)
Translates to: WQGHCWWPLTPSPLQ*IQFGSPREIHCSLT
Trigger: GGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 90 bp AGAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTaGCAAGGCCACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAA +
Preference number: 1 (lower is better)
Translates to: RSVCSHQQHLKLVSV*QGHCWWPLTPSPLQ
Trigger: TTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 90 bp CTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTaGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGT +
Preference number: 1 (lower is better)
Translates to: LLVAPDAKPSSMDPV*LTKRNPLLFNPKGG
Trigger: ACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 90 bp AAATTTGGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTaGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACCCAATGGCCT +
Preference number: 1 (lower is better)
Translates to: KFGQVSQSKRATHST*PFNEFRVLSPTQWP
Trigger: AGGCCATTGGGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR TCA 90 bp GCTTGTAGACAGACTGGAGGGCATGGAGAGCTTCGACTGTTACCCTaGGCTTGCCAATACCTTCACCATCTGCTCGTGCATCAAAAACAT +
Preference number: 1 (lower is better)
Translates to: ACRQTGGHGELRLLP*ACQYLHHLLVHQKH
Trigger: ATGTTTTTGATGCACGAGCAGATGGTGAAGGTATTGGCAAGCTCAGGGTAACAGTCGAAGCTCTCCATGCCCTCCAGTCTGTCTACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR CCA 90 bp CCAGAAGGTTCCAGAGGAACGAGTTGTTATGAAGATTTGCAGAGTTaGATGAGAGCAAGATTCTTCTCGGAGATGGCAGGCCCCAGGACA +
Preference number: 1 (lower is better)
Translates to: PEGSRGTSCYEDLQS*MRARFFSEMAGPRT
Trigger: TGTCCTGGGGCCTGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACAACTCGTTCCTCTGGAACCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 90 bp AGAGTCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTaGCTACTCGGCCTACAGCATGTGGCATCAGGGAGAGCTATGCAT +
Preference number: 1 (lower is better)
Translates to: RVRCKCGSNTCLSTL*LLGLQHVASGRAMH
Trigger: ATGCATAGCTCTCCCTGATGCCACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR CCA 90 bp ATGGGTCCAATTTTCCAGGCGGTCAGGCTGGAGGGTGCAGTCCACTaGTGGCACTTTGAAATGGAAGTGAAAATTCTACCTTGTAAGATA +
Preference number: 1 (lower is better)
Translates to: MGPIFQAVRLEGAVH*WHFEMEVKILPCKI
Trigger: TATCTTACAAGGTAGAATTTTCACTTCCATTTCAAAGTGCCACCAGTGGACTGCACCCTCCAGCCTGACCGCCTGGAAAATTGGACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
3UTR CCA 90 bp TTCCTTTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTaGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTGGCC +
Preference number: 1 (lower is better)
Translates to: FLFHLIPRMIYHWEI*PGITVQEGHTLYLA
Trigger: GGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR CCA 90 bp CGTAGATCACATTGCTATAGTTATAGTAGACCCACTGCCCACTCTTaGGTTTTGGAAGTGACACGGGTGTCTCTTCAGCAGGAAGACTGT +
Preference number: 1 (lower is better)
Translates to: RRSHCYSYSRPTAHS*VLEVTRVSLQQEDC
Trigger: ACAGTCTTCCTGCTGAAGAGACACCCGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGGTCTACTATAACTATAGCAATGTGATCTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR CCA 90 bp GGTCCAATTTTCCAGGCGGTCAGGCTGGAGGGTGCAGTCCACTGGTaGCACTTTGAAATGGAAGTGAAAATTCTACCTTGTAAGATAAAA +
Preference number: 1 (lower is better)
Translates to: GPIFQAVRLEGAVHW*HFEMEVKILPCKIK
Trigger: TTTTATCTTACAAGGTAGAATTTTCACTTCCATTTCAAAGTGCCACCAGTGGACTGCACCCTCCAGCCTGACCGCCTGGAAAATTGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
3UTR CCA 90 bp AGGACAGGGAGGCCCAGTGGTATAGACAGAATTTATAGATTTCTGTaGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAAT +
Preference number: 1 (lower is better)
Translates to: RTGRPSGIDRIYRFL*SDHTLLVPQCTSTN
Trigger: ATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTCTGTCTATACCACTGGGCCTCCCTGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR TCA 90 bp GTAATTACAAAAATCTCATGTAGGAACTTTCATGTGAGCATTTACTaGGGAGTAGGAGATGCCTCTGGAGCATTTGCTTTCAAGCCTCCA +
Preference number: 1 (lower is better)
Translates to: VITKISCRNFHVSIY*GVGDASGAFAFKPP
Trigger: TGGAGGCTTGAAAGCAAATGCTCCAGAGGCATCTCCTACTCCTCAGTAAATGCTCACATGAAAGTTCCTACATGAGATTTTTGTAATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR TCA 90 bp CAAGATAAAACAAACAAAATTCTCAAACAGATTATGAAACCCAACTaGAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAA +
Preference number: 1 (lower is better)
Translates to: QDKTNKILKQIMKPN*SIHMTAFNTTSPLQ
Trigger: TTGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTCATAATCTGTTTGAGAATTTTGTTTGTTTTATCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTCCGGGAGGCGGAAGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKAPGGGS*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACTTCCGCCTCCCGG...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR TCA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTGGAGAACTTAAGTCCTaGGGGGTGGCAGTTATGAGA +
Preference number: 2 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKAGELKS*GVAVMR
Trigger: TCTCATAACTGCCACCCCTCAGGACTTAAGTTCTCC...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR CCA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTGACAATGCGAGACTCTaGGAATGCCAGCTCATTGTT +
Preference number: 2 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKADNARL*ECQLIV
Trigger: AACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTC...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR GCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAGTGTGGCAAGGCCACTaGTGGTGGCCCCTGACGCCA +
Preference number: 2 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSVWQGH*WWPLTP
Trigger: TGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACAC...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTGGCAAGGCCACTGCTaGTGGCCCCTGACGCCAAGC +
Preference number: 2 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNWQGHC*WPLTPS
Trigger: GCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCGTGTGGCAAGGCCACTaGTGGTGGCCCCTGACGCCA +
Preference number: 2 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCVWQGH*WWPLTP
Trigger: TGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACAC...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
3UTR-3UTR GCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATCACACTCCAGGTCCTaGTCGTCCTCTGGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVSHSRS*SSSGGS
Trigger: TGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR TCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAGCTCCCAGCTTCCCATaGATTATAGATTATATACAC +
Preference number: 2 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSAPSFP*IIDYIH
Trigger: GTGTATATAATCTATAATTCATGGGAAGCTGGGAGC...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAAGGAACGAGTTGTTATaGAGATTTGCAGAGTTGGAT +
Preference number: 2 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSRNELL*RFAELD
Trigger: ATCCAACTCTGCAAATCTTCATAACAACTCGTTCCT...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GCCACACACTCTACCTGGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACCCAACTCATTCTGACTGGCTaGTGTGTGTGGGATAATGGT +
Preference number: 2 (lower is better)
Translates to: ATHSTWPFNEFRVLSPTQLILTG*CVWDNG
Trigger: ACCATTATCCCACACACATCAGCCAGTCAGAATGAG...TTGGGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR TCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCCTACATGCCTCATTCTaGCTGGCTGATGTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSALHASF*LADVCG
Trigger: CCCACACACATCAGCCAGTCAGAATGAGGCATGTAG...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAGATTCTTCTCGGAGATaGCAGGCCCCAGGACAGGGA +
Preference number: 2 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSDSSRR*QAPGQG
Trigger: TCCCTGTCCTGGGGCCTGCCATCTCCGAGAAGAATC...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp TGGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACCCAATGGCCTGTGCACAAAGGATCACCTGAGGTCTaGAGTTCATTTGAGACCAGC +
Preference number: 2 (lower is better)
Translates to: WPFNEFRVLSPTQWPVHKGSPEV*SSFETS
Trigger: GCTGGTCTCAAATGAACTCCAGACCTCAGGTGATCC...TTTGTGCACAGGCCATTGGGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCACAGACTGGAGGGCATaGAGAGCTTCGACTGTTACC +
Preference number: 2 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKATDWRA*RASTVT
Trigger: GGTAACAGTCGAAGCTCTCCATGCCCTCCAGTCTGT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR CCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTAGTAGGAGATGCCTCTaGAGCATTTGCTTTCAAGCC +
Preference number: 2 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLASRRCL*SICFQA
Trigger: GGCTTGAAAGCAAATGCTCCAGAGGCATCTCCTACT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR TCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCCTTCGACTGTTACCCTaGGCTTGCCAATACCTTCAC +
Preference number: 2 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKALRLLP*ACQYLH
Trigger: GTGAAGGTATTGGCAAGCTCAGGGTAACAGTCGAAG...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR CAA 90 bp ATGCCTCTGGAGCATTTGCTTTCAAGCCTCCAAGTCATCTCTGTATaGCTTGTAGACAGACTGGAGGGCATGGAGAGCTTCGACTGTTAC +
Preference number: 2 (lower is better)
Translates to: MPLEHLLSSLQVISV*LVDRLEGMESFDCY
Trigger: GTAACAGTCGAAGCTCTCCATGCCCTCCAGTCTGTCTACAAGCAATACAGAGATGACTTGGAGGCTTGAAAGCAAATGCTCCAGAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR TCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGCCATTAGCAGGCTTTaGATGTTCACAAATAGGAGC +
Preference number: 2 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLAISRL*MFTNRS
Trigger: GCTCCTATTTGTGAACATTCAAAGCCTGCTAATGGC...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp CAGTGGTGTGAGATCGAGAGGCATTTAGAGCTTTTGGGTCATAGTGTTCATTGGCTACATGCCTCATTCTaGCTGGCTGATGTGTGTGGG +
Preference number: 2 (lower is better)
Translates to: QWCEIERHLELLGHSVHWLHASF*LADVCG
Trigger: CCCACACACATCAGCCAGTCAGAATGAGGCATGTAG...CCAATGAACACTATGACCCAAAAGCTCTAAATGCCTCTCGATCTCACACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCTGCTTTTCGAGGATCTaGTTACCCAGATACACCCTG +
Preference number: 2 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKACFSRI*LPRYTL
Trigger: CAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCA...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCGTCTGCAGATGTTTGTaGTCTCCAGAAGGTTCCAGA +
Preference number: 2 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAVCRCL*SPEGSR
Trigger: TCTGGAACCTTCTGGAGACCACAAACATCTGCAGAC...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCGCCACACACTCTACCTaGCCCTTTAATGAGTTTAGG +
Preference number: 2 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSAATHST*PFNEFR
Trigger: CCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGC...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR CAA 90 bp TTGTGGTCTCCAGAAGGTTCCAGAGGAACGAGTTGTTATGAAGATTaGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAGGC +
Preference number: 2 (lower is better)
Translates to: LWSPEGSRGTSCYED*QSWMRARFFSEMAG
Trigger: GCCTGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACAACTCGTTCCTCTGGAACCTTCTGGAGACCACAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CAA 90 bp GTTCCTTTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTaGGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTGGC +
Preference number: 2 (lower is better)
Translates to: VPFPPNSENDISLGN*ARYHSPRGPHTLPG
Trigger: GCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAAAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR TCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTACATGTGAGCATTTACTaGGGAGTAGGAGATGCCTCT +
Preference number: 2 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVHVSIY*GVGDAS
Trigger: AGAGGCATCTCCTACTCCTCAGTAAATGCTCACATG...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTGCTCCCAGCTTCCCATaGATTATAGATTATATACAC +
Preference number: 2 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAAPSFP*IIDYIH
Trigger: GTGTATATAATCTATAATTCATGGGAAGCTGGGAGC...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTGTGTGGCAAGGCCACTaGTGGTGGCCCCTGACGCCA +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFVWQGH*WWPLTP
Trigger: TGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACAC...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTACCCAGATACACCCTaGCACTGTACTGGCTTGATG +
Preference number: 2 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFYPDTP*HCTGLM
Trigger: CATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTTGGCAAGGCCACTGCTaGTGGCCCCTGACGCCAAGC +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFWQGHC*WPLTPS
Trigger: GCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCA...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp GCCACACACTCTACCTGGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACCCAAGAATCATACGTGATCTaGCAAAGTCTGAGTGCTTAT +
Preference number: 2 (lower is better)
Translates to: ATHSTWPFNEFRVLSPTQESYVI*QSLSAY
Trigger: ATAAGCACTCAGACTTTGCCAGATCACGTATGATTC...TTGGGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR CAA 90 bp TCACATTGCTATAGTTATAGTAGACCCACTGCCCACTCTTGGGTTTaGGAAGTGACACGGGTGTCTCTTCAGCAGGAAGACTGTAGAATC +
Preference number: 2 (lower is better)
Translates to: SHCYSYSRPTAHSWV*EVTRVSLQQEDCRI
Trigger: GATTCTACAGTCTTCCTGCTGAAGAGACACCCGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGGTCTACTATAACTATAGCAATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACCATGTGAGCATTTACTaGGGAGTAGGAGATGCCTCT +
Preference number: 2 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNHVSIY*GVGDAS
Trigger: AGAGGCATCTCCTACTCCTCAGTAAATGCTCACATG...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp AATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAAGAGGGCCACACTCACAGTCAGTGGTGTaGGATCGAGAGGCATTTAGA +
Preference number: 2 (lower is better)
Translates to: NDISLGNLARYHSPRGPHSQSVV*DREAFR
Trigger: TCTAAATGCCTCTCGATCTCACACCACTGACTGTGA...GTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR TCA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGGTTTTCTCTTTCCCTTaGGGCACATCCATTAAGCAT +
Preference number: 2 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVVFSFP*GTSIKH
Trigger: ATGCTTAATGGATGTGCCTCAAGGGAAAGAGAAAAC...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCATACCCAGATACACCCTaGCACTGTACTGGCTTGATG +
Preference number: 2 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSYPDTP*HCTGLM
Trigger: CATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTA...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAGATTCTTCTCGGAGATaGCAGGCCCCAGGACAGGGA +
Preference number: 2 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKDSSRR*QAPGQG
Trigger: TCCCTGTCCTGGGGCCTGCCATCTCCGAGAAGAATC...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCGCTCCCAGCTTCCCATaGATTATAGATTATATACAC +
Preference number: 2 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAAPSFP*IIDYIH
Trigger: GTGTATATAATCTATAATTCATGGGAAGCTGGGAGC...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAGGAGAACTTAAGTCCTaGGGGGTGGCAGTTATGAGA +
Preference number: 2 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEGELKS*GVAVMR
Trigger: TCTCATAACTGCCACCCCTCAGGACTTAAGTTCTCC...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGGCAAAGGAATCAGGCAAGTaGGTCACAAATCTTGAAAAC +
Preference number: 2 (lower is better)
Translates to: GSNTCLSTLWLLGLQHVAKESGK*VTNLEN
Trigger: GTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTT...TGCCACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR TCA 90 bp AAGCAATTTTCCTGCCTCAACCTCCGAGTAGCTAGGATTACAGGCTTGTGCCACTGCATACATACAACTTaGTTCCTAGCTCAGTCCTTT +
Preference number: 2 (lower is better)
Translates to: KQFSCLNLRVARITGLCHCIHTT*FLAQSF
Trigger: AAAGGACTGAGCTAGGAATCAAGTTGTATGTATGCA...GTGGCACAAGCCTGTAATCCTAGCTACTCGGAGGTTGAGGCAGGAAAATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568653.7
3UTR-3UTR TCA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGCTTTGTCAAGAAACATaGTTGCATCTGTTTGTCTCG +
Preference number: 2 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVLCQET*LHLFVS
Trigger: CGAGACAAACAGATGCAATCATGTTTCTTGACAAAG...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR TCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCCTTTGTCAAGAAACATaGTTGCATCTGTTTGTCTCG +
Preference number: 2 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSALCQET*LHLFVS
Trigger: CGAGACAAACAGATGCAATCATGTTTCTTGACAAAG...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CCA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCGAAGTCAGTGCAATCTaGTTCTTCTCCCTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCEVSAI*FFSLQK
Trigger: CTTCTGCAGGGAGAAGAACCAGATTGCACTGACTTC...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
3UTR-3UTR CCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAGAAGTCAGTGCAATCTaGTTCTTCTCCCTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPEVSAI*FFSLQK
Trigger: CTTCTGCAGGGAGAAGAACCAGATTGCACTGACTTC...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTGTCCTGCTCGTCCTCTaGAGGGTCACTGACCACGGT +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFVLLVL*RVTDHG
Trigger: ACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGAC...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACCCTGTTTGCAAACAGTaGAAACCCACAGCCTATAAA +
Preference number: 2 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNPVCKQ*KPTAYK
Trigger: TTTATAGGCTGTGGGTTTTCACTGTTTGCAAACAGG...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAGCCATTAGCAGGCTTTaGATGTTCACAAATAGGAGC +
Preference number: 2 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSAISRL*MFTNRS
Trigger: GCTCCTATTTGTGAACATTCAAAGCCTGCTAATGGC...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTACATTCCATACAGGTaGCTGGGTCCCATAAGTTTT +
Preference number: 2 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFYIPYR*LGPISF
Trigger: AAAACTTATGGGACCCAGTCACCTGTATGGAATGTA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAATTATGAAACCCAACTaGAGTATCCACATGACAGCG +
Preference number: 2 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSIMKPN*SIHMTA
Trigger: CGCTGTCATGTGGATACTTCAGTTGGGTTTCATAAT...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp CCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCACTCATTCTGACTGGCTaGTGTGTGTGGGATAATGGT +
Preference number: 2 (lower is better)
Translates to: PNSENDISLGNLARYHSPLILTG*CVWDNG
Trigger: ACCATTATCCCACACACATCAGCCAGTCAGAATGAG...TGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR TCA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGAGGTTGTCATATGAATaGGACGTCAACCTAAATATC +
Preference number: 2 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVRLSYE*DVNLNI
Trigger: GATATTTAGGTTGACGTCTCATTCATATGACAACCT...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR TCA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGAGTAAGGTTGTCATATaGATGAGACGTCAACCTAAA +
Preference number: 2 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVSKVVI*MRRQPK
Trigger: TTTAGGTTGACGTCTCATTCATATGACAACCTTACT...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR GCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGACAGCCCGGGAGACAATaGGAGACTCTGGGAATGCCA +
Preference number: 2 (lower is better)
Translates to: RSYSTGPTMYINKLILYGQPGRQ*ETLGMP
Trigger: TGGCATTCCCAGAGTCTCGCATTGTCTCCCGGGCTG...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR CCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCAATGTGACAGAAACATaGCTGTTTCTCTCATCTTGT +
Preference number: 2 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKANVTET*LFLSSC
Trigger: ACAAGATGAGAGAAACAGCCATGTTTCTGTCACATT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGAGAATGATATATCACTaGGAAATTTGGCCAGGTATC +
Preference number: 2 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVRMIYH*EIWPGI
Trigger: GATACCTGGCCAAATTTCCCAGTGATATATCATTCT...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATACCCACTGCCCACTCTTaGGTTTTGGAAGTGACACGG +
Preference number: 2 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIPTAHS*VLEVTR
Trigger: CCGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGG...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR TCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCACCTGTTTGCAAACAGTaGAAACCCACAGCCTATAAA +
Preference number: 2 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPPVCKQ*KPTAYK
Trigger: TTTATAGGCTGTGGGTTTTCACTGTTTGCAAACAGG...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACAGAGCCAGCCGAAGTaGCAACAAACATGTGGTTGT +
Preference number: 2 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAQSQPK*QQTCGC
Trigger: ACAACCACATGTTTGTTGTCACTTCGGCTGGCTCTG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp AATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAAGAGGGCCACACTGCATACATACAACTTaGTTCCTAGCTCAGTCCTTT +
Preference number: 2 (lower is better)
Translates to: NDISLGNLARYHSPRGPHCIHTT*FLAQSF
Trigger: AAAGGACTGAGCTAGGAATCAAGTTGTATGTATGCA...GTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR TCA 90 bp TTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACTCACAGTCAGTGGTGTaGGATCGAGAGGCATTTAGA +
Preference number: 2 (lower is better)
Translates to: FPPNSENDISLGNLARYHSQSVV*DREAFR
Trigger: TCTAAATGCCTCTCGATCTCACACCACTGACTGTGA...GTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR TCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAATCTACTTGGGAGGCTaGGGCAGGAAAATCGCTGGA +
Preference number: 2 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIIYLGG*GRKIAG
Trigger: TCCAGCGATTTTCCTGCCTCAGCCTCCCAAGTAGAT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR GCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAATTAACTTTCAGAGCTaGTTTTCGAGGATCTGGTTA +
Preference number: 2 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVINFQS*FSRIWL
Trigger: TAACCAGATCCTCGAAAAGCAGCTCTGAAAGTTAAT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAATCCTAAGAAGTCAGTaGAATCTGGTTCTTCTCCCT +
Preference number: 2 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPILRSQ*NLVLLP
Trigger: AGGGAGAAGAACCAGATTGCACTGACTTCTTAGGAT...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCGTCAAGAAACATGATTaGATCTGTTTGTCTCGTAAT +
Preference number: 2 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSAVKKHD*ICLSRN
Trigger: ATTACGAGACAAACAGATGCAATCATGTTTCTTGAC...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR GCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATTCACCATCTGCTCGTaGATCAAAAACATCGATATT +
Preference number: 2 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVFTICS*IKNIDI
Trigger: AATATCGATGTTTTTGATGCACGAGCAGATGGTGAA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCCAGATCATACTCTACTaGTCCCACAATGTACATCAA +
Preference number: 2 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFQIILY*SHNVHQ
Trigger: TTGATGTACATTGTGGGACCAGTAGAGTATGATCTG...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCGTGACAACAAACATGTaGTTGTTTACTAGGACTGGA +
Preference number: 2 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFVTTNM*LFTRTG
Trigger: TCCAGTCCTAGTAAACAACCACATGTTTGTTGTCAC...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACGTGACAACAAACATGTaGTTGTTTACTAGGACTGGA +
Preference number: 2 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNVTTNM*LFTRTG
Trigger: TCCAGTCCTAGTAAACAACCACATGTTTGTTGTCAC...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CAA 90 bp CTAGGTCACAGTCAGTGGTGTGAGATCGAGAGGCATTTAGAGCTTTaGGGTCATAGTGTTCATTGGATCATTATTCTCGTAGCTAAAGTA +
Preference number: 2 (lower is better)
Translates to: LGHSQWCEIERHLEL*GHSVHWIIILVAKV
Trigger: TACTTTAGCTACGAGAATAATGATCCAATGAACACTATGACCCAAAAGCTCTAAATGCCTCTCGATCTCACACCACTGACTGTGACCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACATGTGAGCATTTACTaGGGAGTAGGAGATGCCTCT +
Preference number: 2 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLHVSIY*GVGDAS
Trigger: AGAGGCATCTCCTACTCCTCAGTAAATGCTCACATG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCATGTGAGCATTTACTaGGGAGTAGGAGATGCCTCT +
Preference number: 2 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTHVSIY*GVGDAS
Trigger: AGAGGCATCTCCTACTCCTCAGTAAATGCTCACATG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACATGTGAGCATTTACTaGGGAGTAGGAGATGCCTCT +
Preference number: 2 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAHVSIY*GVGDAS
Trigger: AGAGGCATCTCCTACTCCTCAGTAAATGCTCACATG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAGGAGAACTTAAGTCCTaGGGGGTGGCAGTTATGAGA +
Preference number: 2 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIGELKS*GVAVMR
Trigger: TCTCATAACTGCCACCCCTCAGGACTTAAGTTCTCC...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTTCTCAAACAGATTATaGAACCCAACTGAAGTATCC +
Preference number: 2 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNFSNRL*NPTEVS
Trigger: GGATACTTCAGTTGGGTTTCATAATCTGTTTGAGAA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGACTTGGGTTTTGGAAGTaGCACGGGTGTCTCTTCAGC +
Preference number: 2 (lower is better)
Translates to: RSYSTGPTMYINKLILYGLGFWK*HGCLFS
Trigger: GCTGAAGAGACACCCGTGTCACTTCCAAAACCCAAG...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR GCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCATTAACTTTCAGAGCTaGTTTTCGAGGATCTGGTTA +
Preference number: 2 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFINFQS*FSRIWL
Trigger: TAACCAGATCCTCGAAAAGCAGCTCTGAAAGTTAAT...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACGCTGTTTTAAATTACTaGAGGGAATATTATGGGCCT +
Preference number: 2 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNAVLNY*REYYGP
Trigger: AGGCCCATAATATTCCCTGCAGTAATTTAAAACAGC...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAAATACCTTCACCATCTaGTCGTGCATCAAAAACATC +
Preference number: 2 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSNTFTI*SCIKNI
Trigger: GATGTTTTTGATGCACGAGCAGATGGTGAAGGTATT...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR CCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCACAGATCATACTCTACTaGTCCCACAATGTACATCAA +
Preference number: 2 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSQIILY*SHNVHQ
Trigger: TTGATGTACATTGTGGGACCAGTAGAGTATGATCTG...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAGTCTGCAGATGTTTGTaGTCTCCAGAAGGTTCCAGA +
Preference number: 2 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKVCRCL*SPEGSR
Trigger: TCTGGAACCTTCTGGAGACCACAAACATCTGCAGAC...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAGTCTGCAGATGTTTGTaGTCTCCAGAAGGTTCCAGA +
Preference number: 2 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAVCRCL*SPEGSR
Trigger: TCTGGAACCTTCTGGAGACCACAAACATCTGCAGAC...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCAATGTGACAGAAACATaGCTGTTTCTCTCATCTTGT +
Preference number: 2 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFNVTET*LFLSSC
Trigger: ACAAGATGAGAGAAACAGCCATGTTTCTGTCACATT...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAGCTCCCAGCTTCCCATaGATTATAGATTATATACAC +
Preference number: 2 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEAPSFP*IIDYIH
Trigger: GTGTATATAATCTATAATTCATGGGAAGCTGGGAGC...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTGGAGAACTTAAGTCCTaGGGGGTGGCAGTTATGAGA +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFGELKS*GVAVMR
Trigger: TCTCATAACTGCCACCCCTCAGGACTTAAGTTCTCC...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCATTCTCAAACAGATTATaGAACCCAACTGAAGTATCC +
Preference number: 2 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSFSNRL*NPTEVS
Trigger: GGATACTTCAGTTGGGTTTCATAATCTGTTTGAGAA...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCATGGAGAGGTTTAGTCTaGAGATGTTTGTGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAWRGLV*RCLWSP
Trigger: TGGAGACCACAAACATCTGCAGACTAAACCTCTCCA...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATGCGAGACTCTGGGAATaGCAGCTCATTGTTCAGAGA +
Preference number: 2 (lower is better)
Translates to: YSTGPTMYINKLILYGCHARLWE*QLIVQR
Trigger: TCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGC...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTTACCCAGATACACCCTaGCACTGTACTGGCTTGATG +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFYPDTP*HCTGLM
Trigger: CATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTA...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTAGCAACACCTTAAGCTaGTATCTGTGTGGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFSNTLS*YLCGKA
Trigger: GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCATTTATGTTTTGTTGTaGGAACATGAGTGCACGCAA +
Preference number: 2 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCIYVLL*EHECTQ
Trigger: TTGCGTGCACTCATGTTCCCACAACAAAACATAAAT...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
3UTR-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGCCTGTTTGCAAACAGTaGAAACCCACAGCCTATAAA +
Preference number: 2 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRPVCKQ*KPTAYK
Trigger: TTTATAGGCTGTGGGTTTTCACTGTTTGCAAACAGG...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATGCCATTAGCAGGCTTTaGATGTTCACAAATAGGAGC +
Preference number: 2 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHAISRL*MFTNRS
Trigger: GCTCCTATTTGTGAACATTCAAAGCCTGCTAATGGC...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAATACATTCCATACAGGTaGCTGGGTCCCATAAGTTTT +
Preference number: 2 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKYIPYR*LGPISF
Trigger: AAAACTTATGGGACCCAGTCACCTGTATGGAATGTA...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGATTATGAAACCCAACTaGAGTATCCACATGACAGCG +
Preference number: 2 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRIMKPN*SIHMTA
Trigger: CGCTGTCATGTGGATACTTCAGTTGGGTTTCATAAT...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAATTATGAAACCCAACTaGAGTATCCACATGACAGCG +
Preference number: 2 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKIMKPN*SIHMTA
Trigger: CGCTGTCATGTGGATACTTCAGTTGGGTTTCATAAT...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTTGCTTTTCGAGGATCTaGTTACCCAGATACACCCTG +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFCFSRI*LPRYTL
Trigger: CAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCA...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAACCATTAGAGCACAGATaGTTCAAACTATATGCAGAT +
Preference number: 2 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEPLEHR*FKLYAD
Trigger: ATCTGCATATAGTTTGAACCATCTGTGCTCTAATGG...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTAAGTGCTGCGTGCACTaGTCTAGTTACACCAAGAAG +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFKCCVH*SSYTKK
Trigger: CTTCTTGGTGTAACTAGACCAGTGCACGCAGCACTT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGCTCCCAGCTTCCCATaGATTATAGATTATATACAC +
Preference number: 2 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLAPSFP*IIDYIH
Trigger: GTGTATATAATCTATAATTCATGGGAAGCTGGGAGC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTGCCATTAGCAGGCTTTaGATGTTCACAAATAGGAGC +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFAISRL*MFTNRS
Trigger: GCTCCTATTTGTGAACATTCAAAGCCTGCTAATGGC...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAAGGAACGAGTTGTTATaGAGATTTGCAGAGTTGGAT +
Preference number: 2 (lower is better)
Translates to: RRESLLKPLEHRWFKLYARNELL*RFAELD
Trigger: ATCCAACTCTGCAAATCTTCATAACAACTCGTTCCT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAAAAACATCGATATTTTaGTCAATGAGGTCCCTCCCT +
Preference number: 2 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKKTSIF*SMRSLP
Trigger: AGGGAGGGACCTCATTGAGCAAAATATCGATGTTTT...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR CCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGCAGATCATACTCTACTaGTCCCACAATGTACATCAA +
Preference number: 2 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRQIILY*SHNVHQ
Trigger: TTGATGTACATTGTGGGACCAGTAGAGTATGATCTG...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTCCTGTTTGCAAACAGTaGAAACCCACAGCCTATAAA +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFPVCKQ*KPTAYK
Trigger: TTTATAGGCTGTGGGTTTTCACTGTTTGCAAACAGG...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATCAACAAACAGCCGTTaGATAGTGTCATCCATGGTT +
Preference number: 2 (lower is better)
Translates to: RSYSTGPTMYINKLILYGSTNSR*IVSSMV
Trigger: AACCATGGATGACACTATCCAACGGCTGTTTGTTGA...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATACCATTAGAGCACAGATaGTTCAAACTATATGCAGAT +
Preference number: 2 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIPLEHR*FKLYAD
Trigger: ATCTGCATATAGTTTGAACCATCTGTGCTCTAATGG...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTGAAGATTTGCAGAGTTaGATGAGAGCAAGATTCTTC +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFEDLQS*MRARFF
Trigger: GAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTC...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAGTGACAACAAACATGTaGTTGTTTACTAGGACTGGA +
Preference number: 2 (lower is better)
Translates to: RSYSTGPTMYINKLILYGVTTNM*LFTRTG
Trigger: TCCAGTCCTAGTAAACAACCACATGTTTGTTGTCAC...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR TCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTTTCTCTCATCTTGTCTaGGATATACATTCCATACAG +
Preference number: 2 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFFSHLV*DIHSIQ
Trigger: CTGTATGGAATGTATATCTCAGACAAGATGAGAGAA...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR GCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATATTAACTTTCAGAGCTaGTTTTCGAGGATCTGGTTA +
Preference number: 2 (lower is better)
Translates to: YSTGPTMYINKLILYGCHINFQS*FSRIWL
Trigger: TAACCAGATCCTCGAAAAGCAGCTCTGAAAGTTAAT...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGACCATTAGAGCACAGATaGTTCAAACTATATGCAGAT +
Preference number: 2 (lower is better)
Translates to: RSYSTGPTMYINKLILYGPLEHR*FKLYAD
Trigger: ATCTGCATATAGTTTGAACCATCTGTGCTCTAATGG...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTGCCCACTCTTGGGTTTaGGAAGTGACACGGGTGTCT +
Preference number: 3 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKAAHSWV*EVTRVS
Trigger: AGACACCCGTGTCACTTCCAAAACCCAAGAGTGGGC...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR CCA 72 bp GCCAATGTCCTCACACTCCAGGTCCTGCTCGTCCTCTaGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCT +
Preference number: 3 (lower is better)
Translates to: ANVLTLQVLLVL*RVTDHGEAKAS
Trigger: AGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGAGGACATTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR CCA 72 bp TGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTaGCAAGGCCACTGCTGGTGGCCCCTGACGCCAAGC +
Preference number: 3 (lower is better)
Translates to: CSHQQHLKLVSV*QGHCWWPLTPS
Trigger: GCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp GCCAATGTCCTCACACTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACCTCAACAAACAGCCGTaGGATAGTGTCATCCATGGT +
Preference number: 3 (lower is better)
Translates to: ANVLTLQVLLVLWRVTDHLNKQP*DSVIHG
Trigger: ACCATGGATGACACTATCCAACGGCTGTTTGTTGAG...GTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGAGGACATTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR TCA 72 bp CAGACTGGAGGGCATGGAGAGCTTCGACTGTTACCCTaGGCTTGCCAATACCTTCACCATCTGCTCGTGCAT +
Preference number: 3 (lower is better)
Translates to: QTGGHGELRLLP*ACQYLHHLLVH
Trigger: ATGCACGAGCAGATGGTGAAGGTATTGGCAAGCTCAGGGTAACAGTCGAAGCTCTCCATGCCCTCCAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR CCA 72 bp CAAGAAGTGTATGTTCACACCAGCAACACCTTAAGCTaGTATCTGTGTGGCAAGGCCACTGCTGGTGGCCCC +
Preference number: 3 (lower is better)
Translates to: QEVYVHTSNTLS*YLCGKATAGGP
Trigger: GGGGCCACCAGCAGTGGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 72 bp CCAGTAATATGGGTCCAATTTTCCAGGCGGTCAGGCTaGAGGGTGCAGTCCACTGGTGGCACTTTGAAATGG +
Preference number: 3 (lower is better)
Translates to: PVIWVQFSRRSG*RVQSTGGTLKW
Trigger: CCATTTCAAAGTGCCACCAGTGGACTGCACCCTCCAGCCTGACCGCCTGGAAAATTGGACCCATATTACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
3UTR CCA 72 bp CAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTaGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACC +
Preference number: 3 (lower is better)
Translates to: QVSQSKRATHST*PFNEFRVLSPT
Trigger: GGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CAA 90 bp GCCACACACTCTACCTGGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACCCAAAGGTCTGGAGTTCATTaGAGACCAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: ATHSTWPFNEFRVLSPTQRSGVH*RPAWPT
Trigger: TGTTGGCCAGGCTGGTCTCAAATGAACTCCAGACCT...TTGGGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568653.7
3UTR-3UTR CAA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAGCTGTTTCTCTCATCTaGTCTGAGATATACATTCCA +
Preference number: 3 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSAVSLI*SEIYIP
Trigger: TGGAATGTATATCTCAGACAAGATGAGAGAAACAGC...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 72 bp TTCCAGGCGGTCAGGCTGGAGGGTGCAGTCCACTGGTaGCACTTTGAAATGGAAGTGAAAATTCTACCTTGT +
Preference number: 3 (lower is better)
Translates to: FQAVRLEGAVHW*HFEMEVKILPC
Trigger: ACAAGGTAGAATTTTCACTTCCATTTCAAAGTGCCACCAGTGGACTGCACCCTCCAGCCTGACCGCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
3UTR-3UTR CAA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCACGTAGGTATAAATTATaGAGAAGGTACTGCCCATTA +
Preference number: 3 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSRRYKL*RRYCPL
Trigger: TAATGGGCAGTACCTTCTCAATAATTTATACCTACG...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCAAGTCATCTCTGTATaGCTTGTAGACAGACTGGAG +
Preference number: 3 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLQVISV*LVDRLE
Trigger: CTCCAGTCTGTCTACAAGCAATACAGAGATGACTTG...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR TCA 72 bp GAGGAACGAGTTGTTATGAAGATTTGCAGAGTTGGATaGGAGCAAGATTCTTCTCGGAGATGGCAGGCCCCA +
Preference number: 3 (lower is better)
Translates to: EERVVMKICRVG*EQDSSRRWQAP
Trigger: TGGGGCCTGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACAACTCGTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 72 bp TGTAAATGCGGTAGTAATACATGTCTATCCACACTCTaGCTACTCGGCCTACAGCATGTGGCATCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: CKCGSNTCLSTL*LLGLQHVASGR
Trigger: TCTCCCTGATGCCACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CAA 90 bp AAGCAATTTTCCTGCCTCAACCTCCGAGTAGCTAGGATTACAGGCTTGTGCCACAGGAGGTTAAATGGCTaGAACATACATACCACAGGC +
Preference number: 3 (lower is better)
Translates to: KQFSCLNLRVARITGLCHRRLNG*NIHTTG
Trigger: GCCTGTGGTATGTATGTTCAAGCCATTTAACCTCCT...GTGGCACAAGCCTGTAATCCTAGCTACTCGGAGGTTGAGGCAGGAAAATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568653.7
3UTR-3UTR CAA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGAGGAGGTTAAATGGCTaGAACATACATACCACAGGC +
Preference number: 3 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVRRLNG*NIHTTG
Trigger: GCCTGTGGTATGTATGTTCAAGCCATTTAACCTCCT...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CAA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCAGACGAGAGTCATTATaGAAGCCATTAGAGCACAGA +
Preference number: 3 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKARRESL*KPLEHR
Trigger: TCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAATGCCTCTGGAGCATTaGCTTTCAAGCCTCCAAGTC +
Preference number: 3 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSMPLEH*LSSLQV
Trigger: GACTTGGAGGCTTGAAAGCAAATGCTCCAGAGGCAT...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR CCA 72 bp TCCAGAGGAACGAGTTGTTATGAAGATTTGCAGAGTTaGATGAGAGCAAGATTCTTCTCGGAGATGGCAGGC +
Preference number: 3 (lower is better)
Translates to: SRGTSCYEDLQS*MRARFFSEMAG
Trigger: GCCTGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACAACTCGTTCCTCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 72 bp AGGGCAAGAACAAAAGGTATAAGAATACCAGTAATATaGGTCCAATTTTCCAGGCGGTCAGGCTGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: RARTKGIRIPVI*VQFSRRSGWRV
Trigger: CACCCTCCAGCCTGACCGCCTGGAAAATTGGACCCATATTACTGGTATTCTTATACCTTTTGTTCTTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
3UTR CCA 72 bp CACCTAATTCCGAGAATGATATATCACTGGGAAATTTaGCCAGGTATCACAGTCCAAGAGGGCCACACACTC +
Preference number: 3 (lower is better)
Translates to: HLIPRMIYHWEI*PGITVQEGHTL
Trigger: GAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CAA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCAGGAACATAGCCTGTTaGCAAACAGTGAAAACCCAC +
Preference number: 3 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFRNIAC*QTVKTH
Trigger: GTGGGTTTTCACTGTTTGCAAACAGGCTATGTTCCT...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCATCTATTCCATCTTCTaGCCATTAGCAGGCTTTGAA +
Preference number: 3 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAIYSIF*PLAGFE
Trigger: TTCAAAGCCTGCTAATGGCAAGAAGATGGAATAGAT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCAGTTGTTATGAAGATTaGCAGAGTTGGATGAGAGCA +
Preference number: 3 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKASCYED*QSWMRA
Trigger: TGCTCTCATCCAACTCTGCAAATCTTCATAACAACT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGCATGATTGCATCTGTTaGTCTCGTAATAGCCATACA +
Preference number: 3 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVHDCIC*SRNSHT
Trigger: TGTATGGCTATTACGAGACAAACAGATGCAATCATG...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR GCA 72 bp GAACTTTCATGTGAGCATTTACTGAGGAGTAGGAGATaGCTCTGGAGCATTTGCTTTCAAGCCTCCAAGTCA +
Preference number: 3 (lower is better)
Translates to: ELSCEHLLRSRR*LWSICFQASKS
Trigger: TGACTTGGAGGCTTGAAAGCAAATGCTCCAGAGGCATCTCCTACTCCTCAGTAAATGCTCACATGAAAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR CAA 90 bp AATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAAGAGGGCCACACAGGCATTTAGAGCTTTaGGGTCATAGTGTTCATTGG +
Preference number: 3 (lower is better)
Translates to: NDISLGNLARYHSPRGPHRHLEL*GHSVHW
Trigger: CCAATGAACACTATGACCCAAAAGCTCTAAATGCCT...GTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR TCA 72 bp GTGGTCTCCAGAAGGTTCCAGAGGAACGAGTTGTTATaGAGATTTGCAGAGTTGGATGAGAGCAAGATTCTT +
Preference number: 3 (lower is better)
Translates to: VVSRRFQRNELL*RFAELDESKIL
Trigger: AAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACAACTCGTTCCTCTGGAACCTTCTGGAGACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 72 bp TTCCTTTTCCACCTAATTCCGAGAATGATATATCACTaGGAAATTTGGCCAGGTATCACAGTCCAAGAGGGC +
Preference number: 3 (lower is better)
Translates to: FLFHLIPRMIYH*EIWPGITVQEG
Trigger: GCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CAA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCAGACGAGAGTCATTATaGAAGCCATTAGAGCACAGA +
Preference number: 3 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCRRESL*KPLEHR
Trigger: TCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
3UTR-3UTR CAA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAAGTTGTTATGAAGATTaGCAGAGTTGGATGAGAGCA +
Preference number: 3 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSSCYED*QSWMRA
Trigger: TGCTCTCATCCAACTCTGCAAATCTTCATAACAACT...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAACAACAAACATGTGGTaGTTTACTAGGACTGGAGAG +
Preference number: 3 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSTTNMW*FTRTGE
Trigger: CTCTCCAGTCCTAGTAAACAACCACATGTTTGTTGT...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAACAACAAACATGTGGTaGTTTACTAGGACTGGAGAG +
Preference number: 3 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPTTNMW*FTRTGE
Trigger: CTCTCCAGTCCTAGTAAACAACCACATGTTTGTTGT...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACCGTAGGTATAAATTATaGAGAAGGTACTGCCCATTA +
Preference number: 3 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNRRYKL*RRYCPL
Trigger: TAATGGGCAGTACCTTCTCAATAATTTATACCTACG...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAAGACGAGAGTCATTATaGAAGCCATTAGAGCACAGA +
Preference number: 3 (lower is better)
Translates to: CYEDLQSWMRARFFSEMARRESL*KPLEHR
Trigger: TCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCATTAGTCTGCAGATGTTaGTGGTCTCCAGAAGGTTCC +
Preference number: 3 (lower is better)
Translates to: RRESLLKPLEHRWFKLYALVCRC*WSPEGS
Trigger: GGAACCTTCTGGAGACCACAAACATCTGCAGACTAA...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAGGGAATGCCAGCTCATaGTTCAGAGAACCTAGTTTC +
Preference number: 3 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAGNASS*FREPSF
Trigger: GAAACTAGGTTCTCTGAACAATGAGCTGGCATTCCC...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR-3UTR CAA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAAATTCCTTTGCAGCATaGATTCACAGCTCCATTAAA +
Preference number: 3 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSNSFAA*IHSSIK
Trigger: TTTAATGGAGCTGTGAATCAATGCTGCAAAGGAATT...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAAGACGAGAGTCATTATaGAAGCCATTAGAGCACAGA +
Preference number: 3 (lower is better)
Translates to: RRESLLKPLEHRWFKLYARRESL*KPLEHR
Trigger: TCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAAAAAACATCGATATTTaGCTCAATGAGGTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAKNIDI*LNEVPP
Trigger: GGGAGGGACCTCATTGAGCAAAATATCGATGTTTTT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR TCA 72 bp AAAAGTCAAACAGCATCTACCTCAGAAAACAGGTCATaGTCGAAGTCTAAGAGTACCAGATTGCACTTCCAA +
Preference number: 3 (lower is better)
Translates to: KSQTASTSENRS*SKSKSTRLHFQ
Trigger: TTGGAAGTGCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTGTTTGACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
3UTR-3UTR CAA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAAGGAACATAGCCTGTTaGCAAACAGTGAAAACCCAC +
Preference number: 3 (lower is better)
Translates to: RSYSTGPTMYINKLILYGRNIAC*QTVKTH
Trigger: GTGGGTTTTCACTGTTTGCAAACAGGCTATGTTCCT...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATCTATTCCATCTTCTaGCCATTAGCAGGCTTTGAA +
Preference number: 3 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQIYSIF*PLAGFE
Trigger: TTCAAAGCCTGCTAATGGCAAGAAGATGGAATAGAT...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR TCA 72 bp ACCCAATGGCCTGTGCACAAAAGTAAGGTTGTCATATaGATGAGACGTCAACCTAAATATCTGAATTTTCTG +
Preference number: 3 (lower is better)
Translates to: TQWPVHKSKVVI*MRRQPKYLNFL
Trigger: CAGAAAATTCAGATATTTAGGTTGACGTCTCATTCATATGACAACCTTACTTTTGTGCACAGGCCATTGGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR-3UTR CAA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACGTAGGTATAAATTATaGAGAAGGTACTGCCCATTA +
Preference number: 3 (lower is better)
Translates to: RRESLLKPLEHRWFKLYARRYKL*RRYCPL
Trigger: TAATGGGCAGTACCTTCTCAATAATTTATACCTACG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAACGTAGGTATAAATTATaGAGAAGGTACTGCCCATTA +
Preference number: 3 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKRRYKL*RRYCPL
Trigger: TAATGGGCAGTACCTTCTCAATAATTTATACCTACG...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTACAACAAACATGTGGTaGTTTACTAGGACTGGAGAG +
Preference number: 3 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFTTNMW*FTRTGE
Trigger: CTCTCCAGTCCTAGTAAACAACCACATGTTTGTTGT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR TCA 72 bp ACAAACAAAATTCTCAAACAGATTATGAAACCCAACTaGAGTATCCACATGACAGCGTTCAATACTACCTCG +
Preference number: 3 (lower is better)
Translates to: TNKILKQIMKPN*SIHMTAFNTTS
Trigger: CGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTCATAATCTGTTTGAGAATTTTGTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR-3UTR CAA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTAGTTGTTATGAAGATTaGCAGAGTTGGATGAGAGCA +
Preference number: 3 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFSCYED*QSWMRA
Trigger: TGCTCTCATCCAACTCTGCAAATCTTCATAACAACT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CCA 72 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATaGTTCAAACTATATGCAGATATTCATACTTGCATT +
Preference number: 3 (lower is better)
Translates to: RRESLLKPLEHR*FKLYADIHTCI
Trigger: AATGCAAGTATGAATATCTGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR TCA 72 bp ATGCCTAATTCTCTAAATGAAATGGTCTGTGATCACTaGAGCAGAGATTTAATATATCACGGCAAATTAGGT +
Preference number: 3 (lower is better)
Translates to: MPNSLNEMVCDH*SRDLIYHGKLG
Trigger: ACCTAATTTGCCGTGATATATTAAATCTCTGCTTCAGTGATCACAGACCATTTCATTTAGAGAATTAGGCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTATGGCAAGGCCACTGCTaGTGGCCCCTGACGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RSCSSSGGSLTTVKRRLLWQGHC*WPLTPS
Trigger: GCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCA...TAGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp GCCAATGTCCTCACACTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACACTGCTGGTGGCCCCTaGCGCCAAGCCCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: ANVLTLQVLLVLWRVTDHTAGGP*RQALFN
Trigger: ATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGT...GTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGAGGACATTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCACAGTTGGACCAGACATaGCCTAGCGTGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSQLDQT*PSVPLA
Trigger: GGCCAGTGGCACGCTAGGCCATGTCTGGTCCAACTG...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTGGGTGTGGCTGCAGGTaGCTTGCTCGGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAGCGCR*LARDCR
Trigger: CCTGCAGTCCCGAGCAAGCCACCTGCAGCCACACCC...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGGCAAGGCCACTGCTaGTGGCCCCTGACGCCAAGC +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAWQGHC*WPLTPS
Trigger: GCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCA...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAAGAGGGCCACACAGCGTGGCGGGCGGCTaGCCGAGAGGAGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: NDISLGNLARYHSPRGPHSVAGG*PRGARE
Trigger: CTCCCGTGCTCCTCTCGGCCAGCCGCCCGCCACGCT...GTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679110.1
CDS-3UTR CCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCAAGGCCACTGCTGGTaGCCCCTGACGCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLQGHCW*PLTPSP
Trigger: AGGGCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTG...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCCAGGCGGTCAGGCTaGAGGGTGCAGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLASRRSG*RVQSTG
Trigger: ACCAGTGGACTGCACCCTCCAGCCTGACCGCCTGGA...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TACTGCACCCCAGCCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTGCACCGTTTCTGCATaGGTTGCTTGCAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: YCTPARETMRDSGNASSLCTVSA*VACSSL
Trigger: GAGAGAGCTGCAAGCAACTCATGCAGAAACGGTGCA...CAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGGCTGGGGTGCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR GCA 90 bp CCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTTCAGAGAACCTATGGCTGCAGGTGGCTTaGTCGGGACTGCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: PGRQCETLGMPAHCSENLWLQVA*SGLQVV
Trigger: AACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCA...TAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAACACGTGACACTGCCTaGCGAGACTTCATTGTCCGT +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSTRDTA*RDFIVR
Trigger: ACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGT...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTGCTCGGGACTGCAGGTaGTTGCAACATCTTATTGTA +
Preference number: 4 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKAARDCR*LQHLIV
Trigger: TACAATAAGATGTTGCAACCACCTGCAGTCCCGAGC...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTGGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTGGCCCTTTAATCCAGTTCCTCACGACTaGCACGTGACACTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FGQVSQSKRATHSTWPFNPVPHD*HVTLPG
Trigger: GCCAGGCAGTGTCACGTGTCAGTCGTGAGGAACTGG...ATTAAAGGGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAAAGTTATATTCGGGATaGAGGCCTCGCACTACGGGA +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSKLYSG*RPRTTG
Trigger: TCCCGTAGTGCGAGGCCTTCATCCCGAATATAACTT...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAGGAGAACTTAAGTCCTaGGGGGTGGCAGTTATGAGA +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSGELKS*GVAVMR
Trigger: TCTCATAACTGCCACCCCTCAGGACTTAAGTTCTCC...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTGTGCTAACAGAGGATaGTGGAGGAAGTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKACANRG*WRKSLN
Trigger: GTTCAAAGACTTCCTCCAGCATCCTCTGTTAGCACA...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCAGTTGGACCAGACATaGCCTAGCGTGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLQLDQT*PSVPLA
Trigger: GGCCAGTGGCACGCTAGGCCATGTCTGGTCCAACTG...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAGGGTGTGGCTGCAGGTaGCTTGCTCGGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVGCGCR*LARDCR
Trigger: CCTGCAGTCCCGAGCAAGCCACCTGCAGCCACACCC...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACTGCACCCCAGCCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTCTGTAGAACTGAGTTaGGCAGTTTTGGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: YCTPARETMRDSGNASSLSVELS*AVLGAC
Trigger: GCAAGCACCCAAAACTGCTCAACTCAGTTCTACAGA...CAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGGCTGGGGTGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp AGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTAGAAGTCTCATCACTCTaGTGTGGCATGATATCCACG +
Preference number: 4 (lower is better)
Translates to: RSCSSSGGSLTTVKRRLLEVSSL*CGMIST
Trigger: CGTGGATATCATGCCACATCAGAGTGATGAGACTTC...TAGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR GCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTCACACTCCAGGTCCTaGTCGTCCTCTGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLSHSRS*SSSGGS
Trigger: TGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTCACTGTGCCAAAATTTaGGATGTCTCCTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKAHCAKI*DVSFCS
Trigger: GGAACAAAAGGAGACATCCCAAATTTTGGCACAGTG...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTTCAGAGAACCTACACAACATATGGGTGTaGCTGCAGGTGGCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: PGRQCETLGMPAHCSENLHNIWV*LQVACS
Trigger: CGAGCAAGCCACCTGCAGCCACACCCATATGTTGTG...TAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTTTGAACAACTTCTaGCTCTTCGCTGCGAATGAA +
Preference number: 4 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKASLNNF*LFAANE
Trigger: TTCATTCGCAGCGAAGAGCCAGAAGTTGTTCAAAGA...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTTCAGAGAACCTACCCACTGCCCACTCTTaGGTTTTGGAAGTGACACGG +
Preference number: 4 (lower is better)
Translates to: PGRQCETLGMPAHCSENLPTAHS*VLEVTR
Trigger: CCGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGG...TAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACCAAGGCCACTGCTGGTaGCCCCTGACGCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNQGHCW*PLTPSP
Trigger: AGGGCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTG...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTAAGCTGGTATCTGTGTaGCAAGGCCACTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAKLVSV*QGHCWW
Trigger: CCACCAGCAGTGGCCTTGCCACACAGATACCAGCTT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTCTCATCACTCTGATGTaGCATGATATCCACGAAAGA +
Preference number: 4 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKALITLM*HDIHER
Trigger: TCTTTCGTGGATATCATGCCACATCAGAGTGATGAG...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAATCACTGTCAGAAGCTaGCATGTCCTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSITVRS*HVLFNF
Trigger: GAAGTTGAAGAGGACATGTCAGCTTCTGACAGTGAT...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATCGGCAAGGTCGACGTaGGCCACGCCAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVSARST*ATPMSS
Trigger: TGAGGACATTGGCGTGGCTCACGTCGACCTTGCCGA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACTGCACCCCAGCCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGGCCATTAGCAGGCTTTaGATGTTCACAAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: YCTPARETMRDSGNASSLAISRL*MFTNRS
Trigger: GCTCCTATTTGTGAACATTCAAAGCCTGCTAATGGC...CAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGGCTGGGGTGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR GCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCGCAGCTAGCTACCGTTaGTATAGCGCCGACAGCGTG +
Preference number: 4 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSAAASYR*YSADSV
Trigger: CACGCTGTCGGCGCTATAGCAACGGTAGCTAGCTGC...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679110.1
CDS-3UTR GCA 90 bp AGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTAGGGATGTGGAGTTTCTaGTACATCTGCATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RSCSSSGGSLTTVKRRLLGMWSF*YICILE
Trigger: TTCCAAGATGCAGATGTAGCAGAAACTCCACATCCC...TAGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCTCACACTCCAGGTCCTaGTCGTCCTCTGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKASHSRS*SSSGGS
Trigger: TGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGA...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTATGGAGAGGTTTAGTCTaGAGATGTTTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSCSSSGGSLTTVKRRLLWRGLV*RCLWSP
Trigger: TGGAGACCACAAACATCTGCAGACTAAACCTCTCCA...TAGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR GCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCCCGGGAGGCGGAAGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFPGGGS*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACTTCCGCCTCCCGG...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAAGCGTGGCGGGCGGCTaGCCGAGAGGAGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYASVAGG*PRGARE
Trigger: CTCCCGTGCTCCTCTCGGCCAGCCGCCCGCCACGCT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262135.9
CDS-3UTR CCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCATGGGCTTCTAGTTTATaGATACGTGCAGCCCTGATA +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSWASSL*IRAALI
Trigger: TATCAGGGCTGCACGTATCCATAAACTAGAAGCCCA...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTCCAGGCGGTCAGGCTaGAGGGTGCAGTCCACTGGT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFSRRSG*RVQSTG
Trigger: ACCAGTGGACTGCACCCTCCAGCCTGACCGCCTGGA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCCCAGTTCCTCACGACTaGCACGTGACACTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFPVPHD*HVTLPG
Trigger: GCCAGGCAGTGTCACGTGTCAGTCGTGAGGAACTGG...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCACCAGCAGGATGCTTTTaGTGGTCTGTTAACTCAAAT +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSPAGCF*WSVNSN
Trigger: ATTTGAGTTAACAGACCATCAAAAGCATCCTGCTGG...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTCAGAGCCAGCCGAAGTaGCAACAAACATGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAQSQPK*QQTCGC
Trigger: ACAACCACATGTTTGTTGTCACTTCGGCTGGCTCTG...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACACTGCTGGTGGCCCCTaGCGCCAAGCCCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNTAGGP*RQALFN
Trigger: ATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGT...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTATTGTTTCTCAAGACTaGAGCATTTTAAACGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKAIVSQD*SILNAA
Trigger: AGCAGCGTTTAAAATGCTGCAGTCTTGAGAAACAAT...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR GCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTGGCTGCAGGTGGCTTaGTCGGGACTGCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFWLQVA*SGLQVV
Trigger: AACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAGTGTGGCAAGGCCACTaGTGGTGGCCCCTGACGCCA +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEVWQGH*WWPLTP
Trigger: TGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACAC...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTGGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTGGCCCTTTAATGGCCTGCACATAGCATaGCAGTGGGTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: FGQVSQSKRATHSTWPFNGLHIA*QWVVEV
Trigger: GACTTCAACAACCCACTGGCATGCTATGTGCAGGCC...ATTAAAGGGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp TACATCCTGCCTTGTTCCAAACAAGATTCAAGGTGGGGTATTCAATTAAGTTTAAGCGTGGCGGGCGGCTaGCCGAGAGGAGCACGGGAG +
Preference number: 4 (lower is better)
Translates to: YILPCSKQDSRWGIQLSLSVAGG*PRGARE
Trigger: CTCCCGTGCTCCTCTCGGCCAGCCGCCCGCCACGCT...TAAACTTAATTGAATACCCCACCTTGAATCTTGTTTGGAACAAGGCAGGATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGATAGCGCCGACAGCGTaGCGGGCGGCTGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRIAPTA*RAAGRE
Trigger: CTCTCGGCCAGCCGCCCGCCACGCTGTCGGCGCTAT...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262135.9
CDS-3UTR CCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAGGGTGTGGCTGCAGGTaGCTTGCTCGGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEGCGCR*LARDCR
Trigger: CCTGCAGTCCCGAGCAAGCCACCTGCAGCCACACCC...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCATCAACAAACAGCCGTTaGATAGTGTCATCCATGGTT +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSSTNSR*IVSSMV
Trigger: AACCATGGATGACACTATCCAACGGCTGTTTGTTGA...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCGTCCTGCTCGTCCTCTaGAGGGTCACTGACCACGGT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFVLLVL*RVTDHG
Trigger: ACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGAC...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTCCAAGCCCTCTTCAATaGATCCAGTTTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAPSPLQ*IQFGSP
Trigger: TGGTGAGCCAAACTGGATCCATTGAAGAGGGCTTGG...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCACTTCTTGTGAAACCTTaGGAACATGTGGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSLLVKP*EHVEQS
Trigger: TGACTGTTCCACATGTTCCCAAGGTTTCACAAGAAG...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GCCACACACTCTACCTGGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACCCAAAAAATTAGCCAGGTATaGTGGCAGGCGCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: ATHSTWPFNEFRVLSPTQKISQV*WQAPVI
Trigger: GATCACAGGCGCCTGCCACCATACCTGGCTAATTTT...TTGGGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568653.7
CDS-3UTR TCA 90 bp AGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTAAGGAACGAGTTGTTATaGAGATTTGCAGAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: RSCSSSGGSLTTVKRRLLRNELL*RFAELD
Trigger: ATCCAACTCTGCAAATCTTCATAACAACTCGTTCCT...TAGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCACTGCTGGTGGCCCCTaGCGCCAAGCCCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCTAGGP*RQALFN
Trigger: ATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGT...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGCTACATGCCTCATTCTaGCTGGCTGATGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVLHASF*LADVCG
Trigger: CCCACACACATCAGCCAGTCAGAATGAGGCATGTAG...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp GCCACACACTCTACCTGGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACCCAATCACAGTCAGTGGTGTaGGATCGAGAGGCATTTAGA +
Preference number: 4 (lower is better)
Translates to: ATHSTWPFNEFRVLSPTQSQSVV*DREAFR
Trigger: TCTAAATGCCTCTCGATCTCACACCACTGACTGTGA...TTGGGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCATTAATTTTATCCTCCTaGTTGCGGGCATGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSLILSS*LRACCL
Trigger: TAAACAGCATGCCCGCAAGCAGGAGGATAAAATTAA...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTCATCTTACGGGTCACTaGCTCAACCTCCATCTGATA +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAHLTGH*LNLHLI
Trigger: TATCAGATGGAGGTTGAGGCAGTGACCCGTAAGATG...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GCCAATGTCCTCACACTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACATTTGTACTGCTTGGTaGCATAGGCAATATCCTTTA +
Preference number: 4 (lower is better)
Translates to: ANVLTLQVLLVLWRVTDHICTAW*HRQYPL
Trigger: TAAAGGATATTGCCTATGGCACCAAGCAGTACAAAT...GTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGAGGACATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR GCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCATGGCTGCAGGTGGCTTaGTCGGGACTGCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSWLQVA*SGLQVV
Trigger: AACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCA...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCACCACGTAGATCACATTaGTATAGTTATAGTAGACCC +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSPRRSH*YSYSRP
Trigger: GGGTCTACTATAACTATAGCAATGTGATCTACGTGG...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTCACACTCCAGGTCCTaGTCGTCCTCTGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNSHSRS*SSSGGS
Trigger: TGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAAATACCTTCACCATCTaGTCGTGCATCAAAAACATC +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSNTFTI*SCIKNI
Trigger: GATGTTTTTGATGCACGAGCAGATGGTGAAGGTATT...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTCTGAGGAGTAGGAGATaGCTCTGGAGCATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLALRSRR*LWSICF
Trigger: AAAGCAAATGCTCCAGAGGCATCTCCTACTCCTCAG...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCGGCCTGCACATAGCATaGCAGTGGGTTGTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSAGLHIA*QWVVEV
Trigger: GACTTCAACAACCCACTGGCATGCTATGTGCAGGCC...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp GGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGGCATGCAGTCTCATCAGTTaGACCAGACATGGCCTAGCG +
Preference number: 4 (lower is better)
Translates to: GSNTCLSTLWLLGLQHVACSLIS*TRHGLA
Trigger: CGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCA...TGCCACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp CCAAGTCATCTCTGTATTGCTTGTAGACAGACTGGAGGGCATGGAGAGCTTCGAACACGTGACACTGCCTaGCGAGACTTCATTGTCCGT +
Preference number: 4 (lower is better)
Translates to: PSHLCIACRQTGGHGELRTRDTA*RDFIVR
Trigger: ACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGT...TCGAAGCTCTCCATGCCCTCCAGTCTGTCTACAAGCAATACAGAGATGACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAATTTTATACCTTTCCTaGGGCATTCCTGTAAACCAG +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSILYLS*GIPVNQ
Trigger: CTGGTTTACAGGAATGCCCCAGGAAAGGTATAAAAT...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTTCCATTGCTCTTCATaGGCAGCACTGAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLFHCSS*AALKAL
Trigger: CAGTGCCTTCAGTGCTGCCCATGAAGAGCAATGGAA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TACTGCACCCCAGCCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGCTTGGAGATAGGACCTaGAATAATACAGTCATCACT +
Preference number: 4 (lower is better)
Translates to: YCTPARETMRDSGNASSLLGDRT*NNTVIT
Trigger: AGTGATGACTGTATTATTCCAGGTCCTATCTCCAAG...CAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGGCTGGGGTGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CCAAGTCATCTCTGTATTGCTTGTAGACAGACTGGAGGGCATGGAGAGCTTCGAACAGACTGGAGGGCATaGAGAGCTTCGACTGTTACC +
Preference number: 4 (lower is better)
Translates to: PSHLCIACRQTGGHGELRTDWRA*RASTVT
Trigger: GGTAACAGTCGAAGCTCTCCATGCCCTCCAGTCTGT...TCGAAGCTCTCCATGCCCTCCAGTCTGTCTACAAGCAATACAGAGATGACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp GCCAATGTCCTCACACTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACCCATTAGAGCACAGATaGTTCAAACTATATGCAGAT +
Preference number: 4 (lower is better)
Translates to: ANVLTLQVLLVLWRVTDHPLEHR*FKLYAD
Trigger: ATCTGCATATAGTTTGAACCATCTGTGCTCTAATGG...GTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGAGGACATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTAAGTGCTGCGTGCACTaGTCTAGTTACACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAKCCVH*SSYTKK
Trigger: CTTCTTGGTGTAACTAGACCAGTGCACGCAGCACTT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTGGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTGGCCCTTTAATTGTCTATCCACACTCTaGCTACTCGGCCTACAGCAT +
Preference number: 4 (lower is better)
Translates to: FGQVSQSKRATHSTWPFNCLSTL*LLGLQH
Trigger: ATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACA...ATTAAAGGGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp AGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTAAACCTAGTTTCCAGGTaGAACTGCAATTTAGTCCAA +
Preference number: 4 (lower is better)
Translates to: RSCSSSGGSLTTVKRRLLNLVSR*NCNLVQ
Trigger: TTGGACTAAATTGCAGTTCCACCTGGAAACTAGGTT...TAGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCTTCATGGGCAGCACTaGAGGCACTGTCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLLHGQH*RHCHKV
Trigger: AACTTTATGACAGTGCCTTCAGTGCTGCCCATGAAG...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCAAGTCATCTCTGTATTGCTTGTAGACAGACTGGAGGGCATGGAGAGCTTCGAAAGTTATATTCGGGATaGAGGCCTCGCACTACGGGA +
Preference number: 4 (lower is better)
Translates to: PSHLCIACRQTGGHGELRKLYSG*RPRTTG
Trigger: TCCCGTAGTGCGAGGCCTTCATCCCGAATATAACTT...TCGAAGCTCTCCATGCCCTCCAGTCTGTCTACAAGCAATACAGAGATGACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTGCTCTTCGCTGCGAATaGAATTTCCTAAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAALRCE*NFLSLQ
Trigger: CTGAAGACTTAGGAAATTTCATTCGCAGCGAAGAGC...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCGCTGGAGGAAGTCTTTaGACAACTTCTGGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAAGGSL*TTSGSS
Trigger: CGAAGAGCCAGAAGTTGTTCAAAGACTTCCTCCAGC...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTGGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTGGCCCTTTAATCCACAGAGTAGAAACTaGACTGGAACCACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: FGQVSQSKRATHSTWPFNPQSRN*TGTTSL
Trigger: TAAGGAGGTGGTTCCAGTTCAGTTTCTACTCTGTGG...ATTAAAGGGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp TTTGGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTGGCCCTTTAATTCACAGTCAGTGGTGTaGGATCGAGAGGCATTTAGA +
Preference number: 4 (lower is better)
Translates to: FGQVSQSKRATHSTWPFNSQSVV*DREAFR
Trigger: TCTAAATGCCTCTCGATCTCACACCACTGACTGTGA...ATTAAAGGGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp AGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTATTCACCATCTGCTCGTaGATCAAAAACATCGATATT +
Preference number: 4 (lower is better)
Translates to: RSCSSSGGSLTTVKRRLLFTICS*IKNIDI
Trigger: AATATCGATGTTTTTGATGCACGAGCAGATGGTGAA...TAGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAGTGTGGCAAGGCCACTaGTGGTGGCCCCTGACGCCA +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKVWQGH*WWPLTP
Trigger: TGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACAC...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGTGTGGCAAGGCCACTaGTGGTGGCCCCTGACGCCA +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLVWQGH*WWPLTP
Trigger: TGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCACAC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAGGTCAGGCTGGAGGGTaGAGTCCACTGGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEGQAGG*SPLVAL
Trigger: AAGTGCCACCAGTGGACTGCACCCTCCAGCCTGACC...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR GCA 90 bp TTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACGCGCGATCTTGGCTCTaGAACCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: FPPNSENDISLGNLARYHARSWL*NLCLPG
Trigger: ACCCGGGAGGCAGAGGTTGCAGAGCCAAGATCGCGC...GTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568653.7
CDS-3UTR GCA 90 bp GTAGATCACATTGCTATAGTTATAGTAGACCCACTGCCCACTCTTGGGTTTTGGCAGCCCGGGAGACAATaGGAGACTCTGGGAATGCCA +
Preference number: 4 (lower is better)
Translates to: VDHIAIVIVDPLPTLGFWQPGRQ*ETLGMP
Trigger: TGGCATTCCCAGAGTCTCGCATTGTCTCCCGGGCTG...CCAAAACCCAAGAGTGGGCAGTGGGTCTACTATAACTATAGCAATGTGATCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp AGCAAAGTTAAATATGTTCCAGAGACTGAAGTGATGTTTTCATTAGTAAACCCCATAGCGCCGACAGCGTaGCGGGCGGCTGGCCGAGAG +
Preference number: 4 (lower is better)
Translates to: SKVKYVPETEVMFSLVNPIAPTA*RAAGRE
Trigger: CTCTCGGCCAGCCGCCCGCCACGCTGTCGGCGCTAT...GGGGTTTACTAATGAAAACATCACTTCAGTCTCTGGAACATATTTAACTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAACAGTTGGACCAGACATaGCCTAGCGTGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEQLDQT*PSVPLA
Trigger: GGCCAGTGGCACGCTAGGCCATGTCTGGTCCAACTG...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATGCAGTCTCATCAGTTaGACCAGACATGGCCTAGCG +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVCSLIS*TRHGLA
Trigger: CGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAACACGTGACACTGCCTaGCGAGACTTCATTGTCCGT +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVTRDTA*RDFIVR
Trigger: ACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGGGCTTCTAGTTTATaGATACGTGCAGCCCTGATA +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAWASSL*IRAALI
Trigger: TATCAGGGCTGCACGTATCCATAAACTAGAAGCCCA...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTGGGTGTGGCTGCAGGTaGCTTGCTCGGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTGCGCR*LARDCR
Trigger: CCTGCAGTCCCGAGCAAGCCACCTGCAGCCACACCC...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAGGGTGTGGCTGCAGGTaGCTTGCTCGGGACTGCAGG +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQGCGCR*LARDCR
Trigger: CCTGCAGTCCCGAGCAAGCCACCTGCAGCCACACCC...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAGTCCTGCTCGTCCTCTaGAGGGTCACTGACCACGGT +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAVLLVL*RVTDHG
Trigger: ACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGAC...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTAGTAGGAGATGCCTCTaGAGCATTTGCTTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLSRRCL*SICFQA
Trigger: GGCTTGAAAGCAAATGCTCCAGAGGCATCTCCTACT...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAACAAGGCCACTGCTGGTaGCCCCTGACGCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKQGHCW*PLTPSP
Trigger: AGGGCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTG...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACAAGGCCACTGCTGGTaGCCCCTGACGCCAAGCCCT +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAQGHCW*PLTPSP
Trigger: AGGGCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGTGGCAAGGCCACTGCTaGTGGCCCCTGACGCCAAGC +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRWQGHC*WPLTPS
Trigger: GCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCA...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAAAGCTGGTATCTGTGTaGCAAGGCCACTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSKLVSV*QGHCWW
Trigger: CCACCAGCAGTGGCCTTGCCACACAGATACCAGCTT...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAAACCTTGGGAACATGTaGAACAGTCAGCATATTAAT +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSNLGNM*NSQHIN
Trigger: ATTAATATGCTGACTGTTCCACATGTTCCCAAGGTT...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCACTCACGACTGACACGTaGCACTGCCTGGCGAGACTT +
Preference number: 4 (lower is better)
Translates to: PNSENDISLGNLARYHSPLTTDT*HCLARL
Trigger: AAGTCTCGCCAGGCAGTGTCACGTGTCAGTCGTGAG...TGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp TTCCTTTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTCCAGTTCCTCACGACTaGCACGTGACACTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FLFHLIPRMIYHWEIWPGPVPHD*HVTLPG
Trigger: GCCAGGCAGTGTCACGTGTCAGTCGTGAGGAACTGG...ACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTCTTTTCTCCTCAACTaGGTTTTCAGGATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLSFLLN*VFRISA
Trigger: GGCTGAGATCCTGAAAACTCAGTTGAGGAGAAAAGA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCAAGGCAGTCTCGAGCTaGGCAATCTGCACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFKAVSS*AICTFS
Trigger: GCTGAAAGTGCAGATTGCTCAGCTCGAGACTGCCTT...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAAAGGCAGTCTCGAGCTaGGCAATCTGCACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSKAVSS*AICTFS
Trigger: GCTGAAAGTGCAGATTGCTCAGCTCGAGACTGCCTT...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTGCACCGTTTCTGCATaGGTTGCTTGCAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFCTVSA*VACSSL
Trigger: GAGAGAGCTGCAAGCAACTCATGCAGAAACGGTGCA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCATAGGTACAGAAAGTaGCAGGCTCTTTATCTCCAG +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLHRYRK*QALYLQ
Trigger: CTGGAGATAAAGAGCCTGTCACTTTCTGTACCTATG...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTTCAGAGAACCTATACATTCCATACAGGTaGCTGGGTCCCATAAGTTTT +
Preference number: 4 (lower is better)
Translates to: PGRQCETLGMPAHCSENLYIPYR*LGPISF
Trigger: AAAACTTATGGGACCCAGTCACCTGTATGGAATGTA...TAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTTCAGAGAACCTAACTGAAGTATCCACATaGCAGCGTTCAATACTACCT +
Preference number: 4 (lower is better)
Translates to: PGRQCETLGMPAHCSENLTEVST*QRSILP
Trigger: AGGTAGTATTGAACGCTGTCATGTGGATACTTCAGT...TAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTATGCTCTACCTCTGGTaGAATTTCCTTCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAMLYLW*NFLPIF
Trigger: GAAGATAGGAAGGAAATTTCACCAGAGGTAGAGCAT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCCTCATTCTGACTGGCTaGTGTGTGTGGGATAATGGT +
Preference number: 4 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSALILTG*CVWDNG
Trigger: ACCATTATCCCACACACATCAGCCAGTCAGAATGAG...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCGTTTCTGCATGAGTTaGTTGCAGCTCTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLRFCMS*LQLSHR
Trigger: TCTATGAGAGAGCTGCAAGCAACTCATGCAGAAACG...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTGGCTTGCTCGGGACTaGAGGTGGTTGCAACATCTT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFWLARD*RWLQHL
Trigger: AAGATGTTGCAACCACCTGCAGTCCCGAGCAAGCCA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTACCTCATCTACACTaGCTTCTTGTGAAACCTTGG +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLALPHLH*LLVKPW
Trigger: CCAAGGTTTCACAAGAAGGCAGTGTAGATGAGGTAA...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCCGGGAGGCGGAAGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTPGGGS*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACTTCCGCCTCCCGG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563746.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGCAGTTGGACCAGACATaGCCTAGCGTGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: QKRNQASESQILKTAIIMQLDQT*PSVPLA
Trigger: GGCCAGTGGCACGCTAGGCCATGTCTGGTCCAACTG...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp TTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACCAGTTGGACCAGACATaGCCTAGCGTGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: FPPNSENDISLGNLARYHQLDQT*PSVPLA
Trigger: GGCCAGTGGCACGCTAGGCCATGTCTGGTCCAACTG...GTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTGCAGTCTCATCAGTTaGACCAGACATGGCCTAGCG +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFCSLIS*TRHGLA
Trigger: CGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTGCAGTCTCATCAGTTaGACCAGACATGGCCTAGCG +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNCSLIS*TRHGLA
Trigger: CGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TACTGCACCCCAGCCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGCTCGTTCTAAGTGGATaGTTTCATCAAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: YCTPARETMRDSGNASSLLVLSG*FHQIHQ
Trigger: TTGATGAATTTGATGAAACCATCCACTTAGAACGAG...CAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGGCTGGGGTGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCACACAACATATGGGTGTaGCTGCAGGTGGCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSHNIWV*LQVACS
Trigger: CGAGCAAGCCACCTGCAGCCACACCCATATGTTGTG...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTTCAGAGAACCTACATTTCAATATAACATaGATGGTGCCAGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: PGRQCETLGMPAHCSENLHFNIT*MVPAGC
Trigger: GCATCCTGCTGGCACCATCCATGTTATATTGAAATG...TAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTTCAGAGAACCTAGTCCTCTTCAACTTCTaGTTCCAAGTCCTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: PGRQCETLGMPAHCSENLVLFNF*FQVLCY
Trigger: ATAACAGAGGACTTGGAACCAGAAGTTGAAGAGGAC...TAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCCCCACTGCCCACTCTTaGGTTTTGGAAGTGACACGG +
Preference number: 4 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCPTAHS*VLEVTR
Trigger: CCGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGG...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCACAGACTGGAGGGCATaGAGAGCTTCGACTGTTACC +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFTDWRA*RASTVT
Trigger: GGTAACAGTCGAAGCTCTCCATGCCCTCCAGTCTGT...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCAGTAGGAGATGCCTCTaGAGCATTTGCTTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKASRRCL*SICFQA
Trigger: GGCTTGAAAGCAAATGCTCCAGAGGCATCTCCTACT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAGATTCTTCTCGGAGATaGCAGGCCCCAGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEDSSRR*QAPGQG
Trigger: TCCCTGTCCTGGGGCCTGCCATCTCCGAGAAGAATC...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GTAGATCACATTGCTATAGTTATAGTAGACCCACTGCCCACTCTTGGGTTTTGGAAGCTGGTATCTGTGTaGCAAGGCCACTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VDHIAIVIVDPLPTLGFWKLVSV*QGHCWW
Trigger: CCACCAGCAGTGGCCTTGCCACACAGATACCAGCTT...CCAAAACCCAAGAGTGGGCAGTGGGTCTACTATAACTATAGCAATGTGATCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCAAACATGTGTAAGAACTaGTTTTCATTTTCACAGCTC +
Preference number: 4 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSNMCKN*FSFSQL
Trigger: GAGCTGTGAAAATGAAAACCAGTTCTTACACATGTT...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CCA 90 bp GGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGGCAGCCACACACTCTACCTaGCCCTTTAATGAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: GSNTCLSTLWLLGLQHVAATHST*PFNEFR
Trigger: CCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGC...TGCCACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR CAA 72 bp TATAGTTATAGTAGACCCACTGCCCACTCTTGGGTTTaGGAAGTGACACGGGTGTCTCTTCAGCAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: YSYSRPTAHSWV*EVTRVSLQQED
Trigger: GTCTTCCTGCTGAAGAGACACCCGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGGTCTACTATAACTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR CAA 72 bp GAGCATTTGCTTTCAAGCCTCCAAGTCATCTCTGTATaGCTTGTAGACAGACTGGAGGGCATGGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: EHLLSSLQVISV*LVDRLEGMESF
Trigger: GAAGCTCTCCATGCCCTCCAGTCTGTCTACAAGCAATACAGAGATGACTTGGAGGCTTGAAAGCAAATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACCAGTTCCTCACGACTaGCACGTGACACTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLPVPHD*HVTLPG
Trigger: GCCAGGCAGTGTCACGTGTCAGTCGTGAGGAACTGG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGCTGTTCTCGAAGCTaGAGAAGAGATAACTCAATT +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLACCSRS*RRDNSI
Trigger: AATTGAGTTATCTCTTCTTCAGCTTCGAGAACAGCA...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATCGGCAAGGTCGACGTaGGCCACGCCAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLSARST*ATPMSS
Trigger: TGAGGACATTGGCGTGGCTCACGTCGACCTTGCCGA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTAGGAACGAGTTGTTATaGAGATTTGCAGAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLARNELL*RFAELD
Trigger: ATCCAACTCTGCAAATCTTCATAACAACTCGTTCCT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCCAGAGCCAGCCGAAGTaGCAACAAACATGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFQSQPK*QQTCGC
Trigger: ACAACCACATGTTTGTTGTCACTTCGGCTGGCTCTG...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GCCACACACTCTACCTGGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACCCAAAAACAGCCATCATCATaGCTAAAACCCAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: ATHSTWPFNEFRVLSPTQKQPSS*LKPNSK
Trigger: CTTTGAGTTGGGTTTTAGTCATGATGATGGCTGTTT...TTGGGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTCCTGCTTGCGGGCATaGTGTTTAAGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLSCLRA*CLSKMF
Trigger: GAACATTTTACTTAAACAGCATGCCCGCAAGCAGGA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTAATTTTATCCTCCTaGTTGCGGGCATGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLALILSS*LRACCL
Trigger: TAAACAGCATGCCCGCAAGCAGGAGGATAAAATTAA...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAAGGATCTCAGCCAAGTaGTCTAACTCCTCTATCTGG +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVRISAK*SNSSIW
Trigger: CCAGATAGAGGAGTTAGAGCACTTGGCTGAGATCCT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CCAAGTCATCTCTGTATTGCTTGTAGACAGACTGGAGGGCATGGAGAGCTTCGATCCTTTAACTTCCATTaGTCTTCATGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PSHLCIACRQTGGHGELRSFNFH*SSWAAL
Trigger: CAGTGCTGCCCATGAAGAGCAATGGAAGTTAAAGGA...TCGAAGCTCTCCATGCCCTCCAGTCTGTCTACAAGCAATACAGAGATGACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCACTCTTGCACCGTTTCTaGATGAGTTGCTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSLLHRF*MSCLQL
Trigger: GAGCTGCAAGCAACTCATGCAGAAACGGTGCAAGAG...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCATGGCTTGCTCGGGACTaGAGGTGGTTGCAACATCTT +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPWLARD*RWLQHL
Trigger: AAGATGTTGCAACCACCTGCAGTCCCGAGCAAGCCA...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTACAGCCCGGGAGACAATaGGAGACTCTGTTTGATATT +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVQPGRQ*ETLFDI
Trigger: AATATCAAACAGAGTCTCGCATTGTCTCCCGGGCTG...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647211.2
CDS-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTTCCATTGCTCTTCATaGGCAGCACTGAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFFHCSS*AALKAL
Trigger: CAGTGCCTTCAGTGCTGCCCATGAAGAGCAATGGAA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGAATTGCTTGATCCATaGGAACTCTTAATCGGAACC +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLELLDP*ELLIGT
Trigger: GGTTCCGATTAAGAGTTCCCATGGATCAAGCAATTC...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGTCCTGCTCGTCCTCTaGAGGGTCACTGACCACGGT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLVLLVL*RVTDHG
Trigger: ACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGAC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAGTCCTGCTCGTCCTCTaGAGGGTCACTGACCACGGT +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKVLLVL*RVTDHG
Trigger: ACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGAC...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTACCCAGATACACCCTaGCACTGTACTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNYPDTP*HCTGLM
Trigger: CATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCCCAAGCCCTCTTCAATaGATCCAGTTTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFPSPLQ*IQFGSP
Trigger: TGGTGAGCCAAACTGGATCCATTGAAGAGGGCTTGG...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGGCAAGGCCACTGCTaGTGGCCCCTGACGCCAAGC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYWQGHC*WPLTPS
Trigger: GCTTGGCGTCAGGGGCCACCAGCAGTGGCCTTGCCA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCTTCTTGTGAAACCTTaGGAACATGTGGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLLLVKP*EHVEQS
Trigger: TGACTGTTCCACATGTTCCCAAGGTTTCACAAGAAG...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACTCACGACTGACACGTaGCACTGCCTGGCGAGACTT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLTTDT*HCLARL
Trigger: AAGTCTCGCCAGGCAGTGTCACGTGTCAGTCGTGAG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACATCCTGCCTTGTTCCAAACAAGATTCAAGGTGGGGTATTCAATTAAGTTTACCAGTTCCTCACGACTaGCACGTGACACTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: YILPCSKQDSRWGIQLSLPVPHD*HVTLPG
Trigger: GCCAGGCAGTGTCACGTGTCAGTCGTGAGGAACTGG...TAAACTTAATTGAATACCCCACCTTGAATCTTGTTTGGAACAAGGCAGGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR TCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCCAGTTCCTCACGACTaGCACGTGACACTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHPVPHD*HVTLPG
Trigger: GCCAGGCAGTGTCACGTGTCAGTCGTGAGGAACTGG...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAATGCACCGTTTCTGCATaGGTTGCTTGCAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAECTVSA*VACSSL
Trigger: GAGAGAGCTGCAAGCAACTCATGCAGAAACGGTGCA...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCGTTTTGGGTGCTTGCTaGCTTAACGACTGCATATGC +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFVLGAC*LNDCIC
Trigger: GCATATGCAGTCGTTAAGTCAGCAAGCACCCAAAAC...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAGTTTTGGGTGCTTGCTaGCTTAACGACTGCATATGC +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSVLGAC*LNDCIC
Trigger: GCATATGCAGTCGTTAAGTCAGCAAGCACCCAAAAC...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAGCTGGAGGAAGTCTTTaGACAACTTCTGGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPAGGSL*TTSGSS
Trigger: CGAAGAGCCAGAAGTTGTTCAAAGACTTCCTCCAGC...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAATCACTGTCAGAAGCTaGCATGTCCTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVITVRS*HVLFNF
Trigger: GAAGTTGAAGAGGACATGTCAGCTTCTGACAGTGAT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCATCCATGGTTACTTaGGAATCATTAAGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLASSMVT*ESLRLR
Trigger: TCTAAGCCTTAATGATTCTCAAGTAACCATGGATGA...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATTCGGCAAGGTCGACGTaGGCCACGCCAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHSARST*ATPMSS
Trigger: TGAGGACATTGGCGTGGCTCACGTCGACCTTGCCGA...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACCGATATTTTGCTCAATaGGGTCCCTCCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNRYFAQ*GPSLPE
Trigger: TTCAGGAAGGGAGGGACCTCATTGAGCAAAATATCG...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCACATGTGAGCATTTACTaGGGAGTAGGAGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSHVSIY*GVGDAS
Trigger: AGAGGCATCTCCTACTCCTCAGTAAATGCTCACATG...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCCATGTGAGCATTTACTaGGGAGTAGGAGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFHVSIY*GVGDAS
Trigger: AGAGGCATCTCCTACTCCTCAGTAAATGCTCACATG...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAGGAGAACTTAAGTCCTaGGGGGTGGCAGTTATGAGA +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSGELKS*GVAVMR
Trigger: TCTCATAACTGCCACCCCTCAGGACTTAAGTTCTCC...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCGGAGAACTTAAGTCCTaGGGGGTGGCAGTTATGAGA +
Preference number: 4 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCGELKS*GVAVMR
Trigger: TCTCATAACTGCCACCCCTCAGGACTTAAGTTCTCC...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAGCCATTAGCAGGCTTTaGATGTTCACAAATAGGAGC +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVAISRL*MFTNRS
Trigger: GCTCCTATTTGTGAACATTCAAAGCCTGCTAATGGC...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCTACATTCCATACAGGTaGCTGGGTCCCATAAGTTTT +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAYIPYR*LGPISF
Trigger: AAAACTTATGGGACCCAGTCACCTGTATGGAATGTA...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTCTCAAACAGATTATaGAACCCAACTGAAGTATCC +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAFSNRL*NPTEVS
Trigger: GGATACTTCAGTTGGGTTTCATAATCTGTTTGAGAA...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACGAAGTCTCATCACTCTaGTGTGGCATGATATCCACG +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNEVSSL*CGMIST
Trigger: CGTGGATATCATGCCACATCAGAGTGATGAGACTTC...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTGAAGTTGCAGTGAGCTaGGATCGCGCTACTGCACCC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTEVAVS*DRATAP
Trigger: GGGTGCAGTAGCGCGATCTCAGCTCACTGCAACTTC...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563746.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGGAAGTTGCAGTGAGCTaGGATCGCGCTACTGCACCC +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCREVAVS*DRATAP
Trigger: GGGTGCAGTAGCGCGATCTCAGCTCACTGCAACTTC...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCACTACATGCCTCATTCTaGCTGGCTGATGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PNSENDISLGNLARYHSPLHASF*LADVCG
Trigger: CCCACACACATCAGCCAGTCAGAATGAGGCATGTAG...TGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp TTTGGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTGGCCCTTTAATTGCATACATACAACTTaGTTCCTAGCTCAGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FGQVSQSKRATHSTWPFNCIHTT*FLAQSF
Trigger: AAAGGACTGAGCTAGGAATCAAGTTGTATGTATGCA...ATTAAAGGGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp TTTGGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTGGCCCTTTAATCTTTGTCAAGAAACATaGTTGCATCTGTTTGTCTCG +
Preference number: 4 (lower is better)
Translates to: FGQVSQSKRATHSTWPFNLCQET*LHLFVS
Trigger: CGAGACAAACAGATGCAATCATGTTTCTTGACAAAG...ATTAAAGGGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCGTTTTCTCTTTCCCTTaGGGCACATCCATTAAGCAT +
Preference number: 4 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSAVFSFP*GTSIKH
Trigger: ATGCTTAATGGATGTGCCTCAAGGGAAAGAGAAAAC...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGGCAGCTAGCTACCGTTaGTATAGCGCCGACAGCGTG +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRAASYR*YSADSV
Trigger: CACGCTGTCGGCGCTATAGCAACGGTAGCTAGCTGC...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR GCA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGTCCTGCTTGCGGGCATaGTGTTTAAGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVSCLRA*CLSKMF
Trigger: GAACATTTTACTTAAACAGCATGCCCGCAAGCAGGA...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCACATCTTACGGGTCACTaGCTCAACCTCCATCTGATA +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSHLTGH*LNLHLI
Trigger: TATCAGATGGAGGTTGAGGCAGTGACCCGTAAGATG...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATTGGCTGCAGGTGGCTTaGTCGGGACTGCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHWLQVA*SGLQVV
Trigger: AACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCA...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACGATACACCTGTCATGTaGCAACGAAATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNDTPVM*QRNQRH
Trigger: GTGCCTCTGATTTCGTTGGCACATGACAGGTGTATC...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAGATACACCTGTCATGTaGCAACGAAATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSDTPVM*QRNQRH
Trigger: GTGCCTCTGATTTCGTTGGCACATGACAGGTGTATC...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATCACACTCCAGGTCCTaGTCGTCCTCTGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLSHSRS*SSSGGS
Trigger: TGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAATCACACTCCAGGTCCTaGTCGTCCTCTGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQSHSRS*SSSGGS
Trigger: TGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGA...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTGCTGTTTTAAATTACTaGAGGGAATATTATGGGCCT +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAAVLNY*REYYGP
Trigger: AGGCCCATAATATTCCCTGCAGTAATTTAAAACAGC...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATTGTGGGAACATGAGTaGACGCAAAACCTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVLWEHE*TQNLSN
Trigger: ATTGGAGAGGTTTTGCGTGCACTCATGTTCCCACAA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR GCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATGGTCAGGCTGGAGGGTaGAGTCCACTGGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHGQAGG*SPLVAL
Trigger: AAGTGCCACCAGTGGACTGCACCCTCCAGCCTGACC...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR GCA 90 bp TGGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACCCAATGGCCTGTGCACAAAAGAGTCCGCTGTAAATaGGGTAGTAATACATGTCTA +
Preference number: 4 (lower is better)
Translates to: WPFNEFRVLSPTQWPVHKRVRCK*GSNTCL
Trigger: TAGACATGTATTACTACCGCATTTACAGCGGACTCT...TTTGTGCACAGGCCATTGGGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTCCATTAGAGCACAGATaGTTCAAACTATATGCAGAT +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAPLEHR*FKLYAD
Trigger: ATCTGCATATAGTTTGAACCATCTGTGCTCTAATGG...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAGAAGTCAGTGCAATCTaGTTCTTCTCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSEVSAI*FFSLQK
Trigger: CTTCTGCAGGGAGAAGAACCAGATTGCACTGACTTC...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAGGTGCAGTCCACTGGTaGCACTTTGAAATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSGAVHW*HFEMEV
Trigger: CACTTCCATTTCAAAGTGCCACCAGTGGACTGCACC...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCCTTCTTGTGAAACCTTaGGAACATGTGGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKALLVKP*EHVEQS
Trigger: TGACTGTTCCACATGTTCCCAAGGTTTCACAAGAAG...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTATCACTGGGAAATTTaGCCAGGTATCACAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSAYHWEI*PGITVQ
Trigger: TTGGACTGTGATACCTGGCCAAATTTCCCAGTGATA...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp TTCCTTTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTTCGGCCTACAGCATGTaGCATCAGGGAGAGCTATGC +
Preference number: 4 (lower is better)
Translates to: FLFHLIPRMIYHWEIWPGSAYSM*HQGELC
Trigger: GCATAGCTCTCCCTGATGCCACATGCTGTAGGCCGA...ACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGTCGGCCTACAGCATGTaGCATCAGGGAGAGCTATGC +
Preference number: 4 (lower is better)
Translates to: QKRNQASESQILKTAIIMSAYSM*HQGELC
Trigger: GCATAGCTCTCCCTGATGCCACATGCTGTAGGCCGA...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp TACATCCTGCCTTGTTCCAAACAAGATTCAAGGTGGGGTATTCAATTAAGTTTAAGCACGGGAGAAACATaGCAGGCTCCCGTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: YILPCSKQDSRWGIQLSLSTGET*QAPVAS
Trigger: GGAGGCTACGGGAGCCTGCCATGTTTCTCCCGTGCT...TAAACTTAATTGAATACCCCACCTTGAATCTTGTTTGGAACAAGGCAGGATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566096.5
3UTR CAA 72 bp CCACCTAATTCCGAGAATGATATATCACTGGGAAATTaGGCCAGGTATCACAGTCCAAGAGGGCCACACACT +
Preference number: 4 (lower is better)
Translates to: PPNSENDISLGN*ARYHSPRGPHT
Trigger: AGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp TACATCCTGCCTTGTTCCAAACAAGATTCAAGGTGGGGTATTCAATTAAGTTTACTCACGACTGACACGTaGCACTGCCTGGCGAGACTT +
Preference number: 4 (lower is better)
Translates to: YILPCSKQDSRWGIQLSLLTTDT*HCLARL
Trigger: AAGTCTCGCCAGGCAGTGTCACGTGTCAGTCGTGAG...TAAACTTAATTGAATACCCCACCTTGAATCTTGTTTGGAACAAGGCAGGATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR TCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCTCACGACTGACACGTaGCACTGCCTGGCGAGACTT +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHLTTDT*HCLARL
Trigger: AAGTCTCGCCAGGCAGTGTCACGTGTCAGTCGTGAG...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTCCAGTTCCTCACGACTaGCACGTGACACTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFPVPHD*HVTLPG
Trigger: GCCAGGCAGTGTCACGTGTCAGTCGTGAGGAACTGG...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCCGAATATTTGACCTTTaGTCTGTAGCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKARIFDL*SVACCS
Trigger: AGAACAGCAAGCTACAGATCAAAGGTCAAATATTCG...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCTGATATCAAGAAGATaGACATACTGTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLLISRR*TYCSTL
Trigger: CAAAGTGGAACAGTATGTTCATCTTCTTGATATCAG...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAAAGTTATATTCGGGATaGAGGCCTCGCACTACGGGA +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEKLYSG*RPRTTG
Trigger: TCCCGTAGTGCGAGGCCTTCATCCCGAATATAACTT...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAGCTGGAGGAAGTCTTTaGACAACTTCTGGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEAGGSL*TTSGSS
Trigger: CGAAGAGCCAGAAGTTGTTCAAAGACTTCCTCCAGC...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTGTGAAACATCACTCTaGTGTGGCATGATATCCACG +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNCETSL*CGMIST
Trigger: CGTGGATATCATGCCACATCAGAGTGATGTTTCACA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262135.9
CDS-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCATCACTGTCAGAAGCTaGCATGTCCTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFITVRS*HVLFNF
Trigger: GAAGTTGAAGAGGACATGTCAGCTTCTGACAGTGAT...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTCGGCAAGGTCGACGTaGGCCACGCCAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYSARST*ATPMSS
Trigger: TGAGGACATTGGCGTGGCTCACGTCGACCTTGCCGA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTTCGGCAAGGTCGACGTaGGCCACGCCAATGTCCTCA +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFSARST*ATPMSS
Trigger: TGAGGACATTGGCGTGGCTCACGTCGACCTTGCCGA...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCACTTCGACTGTTACCCTaGGCTTGCCAATACCTTCAC +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMALRLLP*ACQYLH
Trigger: GTGAAGGTATTGGCAAGCTCAGGGTAACAGTCGAAG...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCAGGAACGAGTTGTTATaGAGATTTGCAGAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKARNELL*RFAELD
Trigger: ATCCAACTCTGCAAATCTTCATAACAACTCGTTCCT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAATTATGAAACCCAACTaGAGTATCCACATGACAGCG +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVIMKPN*SIHMTA
Trigger: CGCTGTCATGTGGATACTTCAGTTGGGTTTCATAAT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTACTGCTGGTGGCCCCTaGCGCCAAGCCCTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFTAGGP*RQALFN
Trigger: ATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACCAGTGGCTGGGAATTTaGCATTTCTACTACAGTAGG +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNQWLGI*HFYYSR
Trigger: CCTACTGTAGTAGAAATGTCAAATTCCCAGCCACTG...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTCTGATAGTTGGGGATaGATTATCATCCTGATATTG +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLSDSWG*IIILIL
Trigger: CAATATCAGGATGATAATTCATCCCCAACTATCAGA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGAAGGAATCAGGCAAGTaGGTCACAAATCTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVKESGK*VTNLEN
Trigger: GTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTT...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCAAGGAATCAGGCAAGTaGGTCACAAATCTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSAKESGK*VTNLEN
Trigger: GTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTT...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGGGTCTGGAGTTCATTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: QKRNQASESQILKTAIIMGLEFI*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAATGAACTCCAGACC...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568653.7
CDS-3UTR TCA 90 bp AAGCAATTTTCCTGCCTCAACCTCCGAGTAGCTAGGATTACAGGCTTGTGCCACCTTTGTCAAGAAACATaGTTGCATCTGTTTGTCTCG +
Preference number: 4 (lower is better)
Translates to: KQFSCLNLRVARITGLCHLCQET*LHLFVS
Trigger: CGAGACAAACAGATGCAATCATGTTTCTTGACAAAG...GTGGCACAAGCCTGTAATCCTAGCTACTCGGAGGTTGAGGCAGGAAAATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568653.7
CDS-3UTR GCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAGCAGCTAGCTACCGTTaGTATAGCGCCGACAGCGTG +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIAASYR*YSADSV
Trigger: CACGCTGTCGGCGCTATAGCAACGGTAGCTAGCTGC...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR GCA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGTTAATTTTATCCTCCTaGTTGCGGGCATGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVLILSS*LRACCL
Trigger: TAAACAGCATGCCCGCAAGCAGGAGGATAAAATTAA...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCGGGATGTGGAGTTTCTaGTACATCTGCATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFGMWSF*YICILE
Trigger: TTCCAAGATGCAGATGTAGCAGAAACTCCACATCCC...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAAGGATCTCAGCCAAGTaGTCTAACTCCTCTATCTGG +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPRISAK*SNSSIW
Trigger: CCAGATAGAGGAGTTAGAGCACTTGGCTGAGATCCT...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GTAGATCACATTGCTATAGTTATAGTAGACCCACTGCCCACTCTTGGGTTTTGGAGGATCTCAGCCAAGTaGTCTAACTCCTCTATCTGG +
Preference number: 4 (lower is better)
Translates to: VDHIAIVIVDPLPTLGFWRISAK*SNSSIW
Trigger: CCAGATAGAGGAGTTAGAGCACTTGGCTGAGATCCT...CCAAAACCCAAGAGTGGGCAGTGGGTCTACTATAACTATAGCAATGTGATCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR GCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTCAGCATTTTAAACGCTaGTCTTTAAGTTGCATGTTT +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAQHFKR*SLSCMF
Trigger: AAACATGCAACTTAAAGAGCAGCGTTTAAAATGCTG...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTATTGTTTCTCAAGACTaGAGCATTTTAAACGCTGCT +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLIVSQD*SILNAA
Trigger: AGCAGCGTTTAAAATGCTGCAGTCTTGAGAAACAAT...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCATCCTTTAACTTCCATTaGTCTTCATGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSSFNFH*SSWAAL
Trigger: CAGTGCTGCCCATGAAGAGCAATGGAAGTTAAAGGA...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTCCTTTAACTTCCATTaGTCTTCATGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNSFNFH*SSWAAL
Trigger: CAGTGCTGCCCATGAAGAGCAATGGAAGTTAAAGGA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCACGTTTCTGCATGAGTTaGTTGCAGCTCTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSRFCMS*LQLSHR
Trigger: TCTATGAGAGAGCTGCAAGCAACTCATGCAGAAACG...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCACATCTTACGGGTCACTaGCTCAACCTCCATCTGATA +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPHLTGH*LNLHLI
Trigger: TATCAGATGGAGGTTGAGGCAGTGACCCGTAAGATG...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCTTGTTTCATATTCTGTaGTATAAGCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKALFHIL*YKPGGP
Trigger: AGGTCCACCAGGCTTATAGCACAGAATATGAAACAA...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGGCTGCAGGTGGCTTaGTCGGGACTGCAGGTGGTT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYWLQVA*SGLQVV
Trigger: AACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCAAAACATCGATATTTTaGTCAATGAGGTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAKTSIF*SMRSLP
Trigger: AGGGAGGGACCTCATTGAGCAAAATATCGATGTTTT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTTCACCATCTGCTCGTaGATCAAAAACATCGATATT +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLFTICS*IKNIDI
Trigger: AATATCGATGTTTTTGATGCACGAGCAGATGGTGAA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTGGAGAGGTTTAGTCTaGAGATGTTTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNWRGLV*RCLWSP
Trigger: TGGAGACCACAAACATCTGCAGACTAAACCTCTCCA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAGCGAGACTCTGGGAATaGCAGCTCATTGTTCAGAGA +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAARLWE*QLIVQR
Trigger: TCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGC...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCAGTTGGACCAGACATaGCCTAGCGTGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYQLDQT*PSVPLA
Trigger: GGCCAGTGGCACGCTAGGCCATGTCTGGTCCAACTG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGCAAAGTTAAATATGTTCCAGAGACTGAAGTGATGTTTTCATTAGTAAACCCCCAGTTGGACCAGACATaGCCTAGCGTGCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: SKVKYVPETEVMFSLVNPQLDQT*PSVPLA
Trigger: GGCCAGTGGCACGCTAGGCCATGTCTGGTCCAACTG...GGGGTTTACTAATGAAAACATCACTTCAGTCTCTGGAACATATTTAACTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CCA 90 bp TTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACTGCAGTCTCATCAGTTaGACCAGACATGGCCTAGCG +
Preference number: 4 (lower is better)
Translates to: FPPNSENDISLGNLARYHCSLIS*TRHGLA
Trigger: CGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCA...GTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATGTAAACATGGGATGTaGAGTTTCTGCTACATCTGC +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVCKHGM*SFCYIC
Trigger: GCAGATGTAGCAGAAACTCCACATCCCATGTTTACA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACGCCATCAAAGCATCGTaGCTGATTCTGAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNAIKAS*LILRVL
Trigger: AAGAACTCTCAGAATCAGCCACGATGCTTTGATGGC...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTCTCGTTCTAAGTGGATaGTTTCATCAAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLALVLSG*FHQIHQ
Trigger: TTGATGAATTTGATGAAACCATCCACTTAGAACGAG...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAGCTCGGGACTGCAGGTaGTTGCAACATCTTATTGTA +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPARDCR*LQHLIV
Trigger: TACAATAAGATGTTGCAACCACCTGCAGTCCCGAGC...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACACAACATATGGGTGTaGCTGCAGGTGGCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLHNIWV*LQVACS
Trigger: CGAGCAAGCCACCTGCAGCCACACCCATATGTTGTG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAGTCCTCTTCAACTTCTaGTTCCAAGTCCTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVVLFNF*FQVLCY
Trigger: ATAACAGAGGACTTGGAACCAGAAGTTGAAGAGGAC...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCCCACTGCCCACTCTTaGGTTTTGGAAGTGACACGG +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTPTAHS*VLEVTR
Trigger: CCGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACCCACTGCCCACTCTTaGGTTTTGGAAGTGACACGG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLPTAHS*VLEVTR
Trigger: CCGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCATGCTTTTCGAGGATCTaGTTACCCAGATACACCCTG +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPCFSRI*LPRYTL
Trigger: CAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCA...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATGATTCTTCTCGGAGATaGCAGGCCCCAGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHDSSRR*QAPGQG
Trigger: TCCCTGTCCTGGGGCCTGCCATCTCCGAGAAGAATC...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAGTCTGCAGATGTTTGTaGTCTCCAGAAGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPVCRCL*SPEGSR
Trigger: TCTGGAACCTTCTGGAGACCACAAACATCTGCAGAC...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCGTGACAACAAACATGTaGTTGTTTACTAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAVTTNM*LFTRTG
Trigger: TCCAGTCCTAGTAAACAACCACATGTTTGTTGTCAC...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAACCAAGCCCTCTTCAATaGATCCAGTTTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEPSPLQ*IQFGSP
Trigger: TGGTGAGCCAAACTGGATCCATTGAAGAGGGCTTGG...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTAAGCTGGTATCTGTGTaGCAAGGCCACTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTKLVSV*QGHCWW
Trigger: CCACCAGCAGTGGCCTTGCCACACAGATACCAGCTT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAAGCAACACCTTAAGCTaGTATCTGTGTGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMASNTLS*YLCGKA
Trigger: GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCT...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAGAGGGTGCAGTCCACTaGTGGCACTTTGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAEGAVH*WHFEME
Trigger: TTCCATTTCAAAGTGCCACCAGTGGACTGCACCCTC...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTACTCATCACTCTGATGTaGCATGATATCCACGAAAGA +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVLITLM*HDIHER
Trigger: TCTTTCGTGGATATCATGCCACATCAGAGTGATGAG...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCGAATCATACGTGATCTaGCAAAGTCTGAGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSAESYVI*QSLSAY
Trigger: ATAAGCACTCAGACTTTGCCAGATCACGTATGATTC...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR CAA 72 bp CCAGAAGGTTCCAGAGGAACGAGTTGTTATGAAGATTaGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: PEGSRGTSCYED*QSWMRARFFSE
Trigger: CTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACAACTCGTTCCTCTGGAACCTTCTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCTCACGACTGACACGTaGCACTGCCTGGCGAGACTT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYLTTDT*HCLARL
Trigger: AAGTCTCGCCAGGCAGTGTCACGTGTCAGTCGTGAG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATGCTGTTCTCGAAGCTaGAGAAGAGATAACTCAATT +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVCCSRS*RRDNSI
Trigger: AATTGAGTTATCTCTTCTTCAGCTTCGAGAACAGCA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATTTTCCTTCCATTGCTaGAAGAGCATTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVFSFHC*KSIAFL
Trigger: GAGAAAAGCAATGCTCTTTCAGCAATGGAAGGAAAA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCACTTCATGGGCAGCACTaGAGGCACTGTCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMALHGQH*RHCHKV
Trigger: AACTTTATGACAGTGCCTTCAGTGCTGCCCATGAAG...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAAAGGCAGTCTCGAGCTaGGCAATCTGCACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLKAVSS*AICTFS
Trigger: GCTGAAAGTGCAGATTGCTCAGCTCGAGACTGCCTT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAATGCACCGTTTCTGCATaGGTTGCTTGCAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKCTVSA*VACSSL
Trigger: GAGAGAGCTGCAAGCAACTCATGCAGAAACGGTGCA...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACGTCTTCAGTTGTTATTaGTCCACTTGGTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNVFSCY*STWWKV
Trigger: TACCTTCCACCAAGTGGATCAATAACAACTGAAGAC...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACCTTTGTTCTGCAAGCTaGCCTTCAGATAGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNLCSAS*PSDSKD
Trigger: GTCTTTACTATCTGAAGGTCAGCTTGCAGAACAAAG...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCTCATCCATGGTTACTTaGGAATCATTAAGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKASSMVT*ESLRLR
Trigger: TCTAAGCCTTAATGATTCTCAAGTAACCATGGATGA...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAACTTGGGTTTTGGAAGTaGCACGGGTGTCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQLGFWK*HGCLFS
Trigger: GCTGAAGAGACACCCGTGTCACTTCCAAAACCCAAG...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCTTGGGTTTTGGAAGTaGCACGGGTGTCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLGFWK*HGCLFS
Trigger: GCTGAAGAGACACCCGTGTCACTTCCAAAACCCAAG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGCTTGGGTTTTGGAAGTaGCACGGGTGTCTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRLGFWK*HGCLFS
Trigger: GCTGAAGAGACACCCGTGTCACTTCCAAAACCCAAG...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCACTGAAGTATCCACATaGCAGCGTTCAATACTACCT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFTEVST*QRSILP
Trigger: AGGTAGTATTGAACGCTGTCATGTGGATACTTCAGT...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACATTATGAAACCCAACTaGAGTATCCACATGACAGCG +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNIMKPN*SIHMTA
Trigger: CGCTGTCATGTGGATACTTCAGTTGGGTTTCATAAT...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACATGCTCTACCTCTGGTaGAATTTCCTTCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNMLYLW*NFLPIF
Trigger: GAAGATAGGAAGGAAATTTCACCAGAGGTAGAGCAT...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAATACACTGCCTTCTTGTaGAACCTTGGGAACATGTGG +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEYTAFL*NLGNMW
Trigger: CCACATGTTCCCAAGGTTTCACAAGAAGGCAGTGTA...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACGAAGTTGCAGTGAGCTaGGATCGCGCTACTGCACCC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYEVAVS*DRATAP
Trigger: GGGTGCAGTAGCGCGATCTCAGCTCACTGCAACTTC...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563746.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTATCTACTTGGGAGGCTaGGGCAGGAAAATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTIYLGG*GRKIAG
Trigger: TCCAGCGATTTTCCTGCCTCAGCCTCCCAAGTAGAT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563746.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAATCTACTTGGGAGGCTaGGGCAGGAAAATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAIYLGG*GRKIAG
Trigger: TCCAGCGATTTTCCTGCCTCAGCCTCCCAAGTAGAT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TCCGCTGTAAATGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCAGGTTGTCATATGAATaGGACGTCAACCTAAATATC +
Preference number: 4 (lower is better)
Translates to: SAVNAVVIHVYPHSGYSARLSYE*DVNLNI
Trigger: GATATTTAGGTTGACGTCTCATTCATATGACAACCT...GGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCATTTACAGCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp AGCAAAGTTAAATATGTTCCAGAGACTGAAGTGATGTTTTCATTAGTAAACCCCGCAGCTAGCTACCGTTaGTATAGCGCCGACAGCGTG +
Preference number: 4 (lower is better)
Translates to: SKVKYVPETEVMFSLVNPAASYR*YSADSV
Trigger: CACGCTGTCGGCGCTATAGCAACGGTAGCTAGCTGC...GGGGTTTACTAATGAAAACATCACTTCAGTCTCTGGAACATATTTAACTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR GCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATTAATTTTATCCTCCTaGTTGCGGGCATGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVLILSS*LRACCL
Trigger: TAAACAGCATGCCCGCAAGCAGGAGGATAAAATTAA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAGGGATGTGGAGTTTCTaGTACATCTGCATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSGMWSF*YICILE
Trigger: TTCCAAGATGCAGATGTAGCAGAAACTCCACATCCC...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAGGGATGTGGAGTTTCTaGTACATCTGCATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPGMWSF*YICILE
Trigger: TTCCAAGATGCAGATGTAGCAGAAACTCCACATCCC...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCTTGCTGAAAGAGCATTaGTTTTCTCTACTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKALLKEH*FSLLAV
Trigger: AACAGCTAGTAGAGAAAAGCAATGCTCTTTCAGCAA...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCATTGTTTCTCAAGACTaGAGCATTTTAAACGCTGCT +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAIVSQD*SILNAA
Trigger: AGCAGCGTTTAAAATGCTGCAGTCTTGAGAAACAAT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCTGTTCCAATCAAACTTaGTGTACAAAATATTCGGCC +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKACSNQT*CTKYSA
Trigger: GGCCGAATATTTTGTACAGCAAGTTTGATTGGAACA...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGCTTGCTCGGGACTaGAGGTGGTTGCAACATCTT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLWLARD*RWLQHL
Trigger: AAGATGTTGCAACCACCTGCAGTCCCGAGCAAGCCA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCATGGCTTGCTCGGGACTaGAGGTGGTTGCAACATCTT +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAWLARD*RWLQHL
Trigger: AAGATGTTGCAACCACCTGCAGTCCCGAGCAAGCCA...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAACTGAGGAGTAGGAGATaGCTCTGGAGCATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAELRSRR*LWSICF
Trigger: AAAGCAAATGCTCCAGAGGCATCTCCTACTCCTCAG...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCATTAACTTTCAGAGCTaGTTTTCGAGGATCTGGTTA +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAINFQS*FSRIWL
Trigger: TAACCAGATCCTCGAAAAGCAGCTCTGAAAGTTAAT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTCTATTTCTGGTATATaGTCTACCTCTGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLSISGI*STSGEI
Trigger: AATTTCACCAGAGGTAGAGCATATACCAGAAATAGA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTGCAGTCTCATCAGTTaGACCAGACATGGCCTAGCG +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTCSLIS*TRHGLA
Trigger: CGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAACACGTGACACTGCCTaGCGAGACTTCATTGTCCGT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLTRDTA*RDFIVR
Trigger: ACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGAGATAACAGAATGCATACATACAACTTGATTCCTAGCTCAGTCCTTTTCCCAACACGTGACACTGCCTaGCGAGACTTCATTGTCCGT +
Preference number: 4 (lower is better)
Translates to: RDNRMHTYNLIPSSVLFPTRDTA*RDFIVR
Trigger: ACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGT...TGGGAAAAGGACTGAGCTAGGAATCAAGTTGTATGTATGCATTCTGTTATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAACACGTGACACTGCCTaGCGAGACTTCATTGTCCGT +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYATRDTA*RDFIVR
Trigger: ACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AAAGTAAAACGAACTTTCAGGAGGTTAAATGGCTTGAACATACATACCACAGGCACACGTGACACTGCCTaGCGAGACTTCATTGTCCGT +
Preference number: 4 (lower is better)
Translates to: KVKRTFRRLNGLNIHTTGTRDTA*RDFIVR
Trigger: ACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGT...GCCTGTGGTATGTATGTTCAAGCCATTTAACCTCCTGAAAGTTCGTTTTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAATTTTATACCTTTCCTaGGGCATTCCTGTAAACCAG +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVILYLS*GIPVNQ
Trigger: CTGGTTTACAGGAATGCCCCAGGAAAGGTATAAAAT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCATGATCATCAAACTGTaGATCATTGCTACTGGGAAT +
Preference number: 4 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAMIIKL*IIATGN
Trigger: ATTCCCAGTAGCAATGATCCACAGTTTGATGATCAT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTCTTTGAACAACTTCTaGCTCTTCGCTGCGAATGAA +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNSLNNF*LFAANE
Trigger: TTCATTCGCAGCGAAGAGCCAGAAGTTGTTCAAAGA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAACAGACTGGAGGGCATaGAGAGCTTCGACTGTTACC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLTDWRA*RASTVT
Trigger: GGTAACAGTCGAAGCTCTCCATGCCCTCCAGTCTGT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAACAGACTGGAGGGCATaGAGAGCTTCGACTGTTACC +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKTDWRA*RASTVT
Trigger: GGTAACAGTCGAAGCTCTCCATGCCCTCCAGTCTGT...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAAGTAGGAGATGCCTCTaGAGCATTTGCTTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAESRRCL*SICFQA
Trigger: GGCTTGAAAGCAAATGCTCCAGAGGCATCTCCTACT...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAATGCTTTTCGAGGATCTaGTTACCCAGATACACCCTG +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAECFSRI*LPRYTL
Trigger: CAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCA...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAGATTCTTCTCGGAGATaGCAGGCCCCAGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGDSSRR*QAPGQG
Trigger: TCCCTGTCCTGGGGCCTGCCATCTCCGAGAAGAATC...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTGATTCTTCTCGGAGATaGCAGGCCCCAGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFDSSRR*QAPGQG
Trigger: TCCCTGTCCTGGGGCCTGCCATCTCCGAGAAGAATC...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAGAAGATTTGCAGAGTTaGATGAGAGCAAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVEDLQS*MRARFF
Trigger: GAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTC...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAGAAGTCAGTGCAATCTaGTTCTTCTCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEEVSAI*FFSLQK
Trigger: CTTCTGCAGGGAGAAGAACCAGATTGCACTGACTTC...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGGGATCACCTGAGGTCTaGAGTTCATTTGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: QKRNQASESQILKTAIIMGSPEV*SSFETS
Trigger: GCTGGTCTCAAATGAACTCCAGACCTCAGGTGATCC...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp TTCCTTTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTGGATCACCTGAGGTCTaGAGTTCATTTGAGACCAGC +
Preference number: 4 (lower is better)
Translates to: FLFHLIPRMIYHWEIWPGGSPEV*SSFETS
Trigger: GCTGGTCTCAAATGAACTCCAGACCTCAGGTGATCC...ACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGTGTCTATCCACACTCTaGCTACTCGGCCTACAGCAT +
Preference number: 4 (lower is better)
Translates to: QKRNQASESQILKTAIIMCLSTL*LLGLQH
Trigger: ATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACA...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAATCTTTTCTCCTCAACTaGGTTTTCAGGATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAESFLLN*VFRISA
Trigger: GGCTGAGATCCTGAAAACTCAGTTGAGGAGAAAAGA...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTTTTCCTTCCATTGCTaGAAGAGCATTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNFSFHC*KSIAFL
Trigger: GAGAAAAGCAATGCTCTTTCAGCAATGGAAGGAAAA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAAAGTTATATTCGGGATaGAGGCCTCGCACTACGGGA +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLKLYSG*RPRTTG
Trigger: TCCCGTAGTGCGAGGCCTTCATCCCGAATATAACTT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCACCAGCAGGATGCTTTTaGTGGTCTGTTAACTCAAAT +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSPAGCF*WSVNSN
Trigger: ATTTGAGTTAACAGACCATCAAAAGCATCCTGCTGG...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAGTCTTCAGTTGTTATTaGTCCACTTGGTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPVFSCY*STWWKV
Trigger: TACCTTCCACCAAGTGGATCAATAACAACTGAAGAC...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GTAGATCACATTGCTATAGTTATAGTAGACCCACTGCCCACTCTTGGGTTTTGGGTCTTCAGTTGTTATTaGTCCACTTGGTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: VDHIAIVIVDPLPTLGFWVFSCY*STWWKV
Trigger: TACCTTCCACCAAGTGGATCAATAACAACTGAAGAC...CCAAAACCCAAGAGTGGGCAGTGGGTCTACTATAACTATAGCAATGTGATCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGCTGGAGGAAGTCTTTaGACAACTTCTGGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLAGGSL*TTSGSS
Trigger: CGAAGAGCCAGAAGTTGTTCAAAGACTTCCTCCAGC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACTTCGACTGTTACCCTaGGCTTGCCAATACCTTCAC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLRLLP*ACQYLH
Trigger: GTGAAGGTATTGGCAAGCTCAGGGTAACAGTCGAAG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACTTCGACTGTTACCCTaGGCTTGCCAATACCTTCAC +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYALRLLP*ACQYLH
Trigger: GTGAAGGTATTGGCAAGCTCAGGGTAACAGTCGAAG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACGCTCCCAGCTTCCCATaGATTATAGATTATATACAC +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNAPSFP*IIDYIH
Trigger: GTGTATATAATCTATAATTCATGGGAAGCTGGGAGC...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTGGAGAACTTAAGTCCTaGGGGGTGGCAGTTATGAGA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTGELKS*GVAVMR
Trigger: TCTCATAACTGCCACCCCTCAGGACTTAAGTTCTCC...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCACCTGTTTGCAAACAGTaGAAACCCACAGCCTATAAA +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSPVCKQ*KPTAYK
Trigger: TTTATAGGCTGTGGGTTTTCACTGTTTGCAAACAGG...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCAGAGCCAGCCGAAGTaGCAACAAACATGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTQSQPK*QQTCGC
Trigger: ACAACCACATGTTTGTTGTCACTTCGGCTGGCTCTG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCACTGAAGTATCCACATaGCAGCGTTCAATACTACCT +
Preference number: 4 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCTEVST*QRSILP
Trigger: AGGTAGTATTGAACGCTGTCATGTGGATACTTCAGT...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAACAGTGGCTGGGAATTTaGCATTTCTACTACAGTAGG +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEQWLGI*HFYYSR
Trigger: CCTACTGTAGTAGAAATGTCAAATTCCCAGCCACTG...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCATTTTGTGGTAACGAATaGATGGCAGGAACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPFCGNE*MAGTAE
Trigger: TTCTGCTGTTCCTGCCATTCATTCGTTACCACAAAA...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAACCTCTCCAATCACATaGCCACTTCTCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYATSPIT*PLLSPH
Trigger: ATGTGGGCTGAGAAGTGGTCATGTGATTGGAGAGGT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAGCCTTCAGGCATGAGTaGCTTATTAAAATGTACTCT +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSAFRHE*LIKMYS
Trigger: AGAGTACATTTTAATAAGTCACTCATGCCTGAAGGC...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TTCCTTTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATGCCAGTGGGTTGTTaGAGTCCACAGAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: FLFHLIPRMIYHWEIWPGMPVGC*SPQSRN
Trigger: GTTTCTACTCTGTGGACTTCAACAACCCACTGGCAT...ACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp TTCCTTTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTCTCATTCTGACTGGCTaGTGTGTGTGGGATAATGGT +
Preference number: 4 (lower is better)
Translates to: FLFHLIPRMIYHWEIWPGLILTG*CVWDNG
Trigger: ACCATTATCCCACACACATCAGCCAGTCAGAATGAG...ACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCACCAGCATTTTCATTTaGTTTTCTACGCCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFTSIFI*FSTPSV
Trigger: AACACTGGGCGTAGAAAAGCAAATGAAAATGCTGGT...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAATCCTTTAACTTCCATTaGTCTTCATGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAESFNFH*SSWAAL
Trigger: CAGTGCTGCCCATGAAGAGCAATGGAAGTTAAAGGA...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACTCTTGCACCGTTTCTaGATGAGTTGCTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYALLHRF*MSCLQL
Trigger: GAGCTGCAAGCAACTCATGCAGAAACGGTGCAAGAG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGCTCTTGCACCGTTTCTaGATGAGTTGCTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRLLHRF*MSCLQL
Trigger: GAGCTGCAAGCAACTCATGCAGAAACGGTGCAAGAG...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAACTCTTGCACCGTTTCTaGATGAGTTGCTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQLLHRF*MSCLQL
Trigger: GAGCTGCAAGCAACTCATGCAGAAACGGTGCAAGAG...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTTGTTTCATATTCTGTaGTATAAGCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFLFHIL*YKPGGP
Trigger: AGGTCCACCAGGCTTATAGCACAGAATATGAAACAA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAACCAGTATTCCACTGTaGCAAAATTTGGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPTSIPL*QNLGCL
Trigger: GAGACATCCCAAATTTTGGCACAGTGGAATACTGGT...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTTCATCTTCAGAAGATaGCAAGCTTTGTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFFIFRR*QALFCK
Trigger: CTTGCAGAACAAAGCTTGGCATCTTCTGAAGATGAA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCACCACGTAGATCACATTaGTATAGTTATAGTAGACCC +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSPRRSH*YSYSRP
Trigger: GGGTCTACTATAACTATAGCAATGTGATCTACGTGG...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAATTGTGGGAACATGAGTaGACGCAAAACCTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAELWEHE*TQNLSN
Trigger: ATTGGAGAGGTTTTGCGTGCACTCATGTTCCCACAA...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR GCA 90 bp TTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACCCACCCAATGGCCTGTaGACAAAAGTAAGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: FPPNSENDISLGNLARYHPPNGL*TKVRLS
Trigger: TGACAACCTTACTTTTGTGCACAGGCCATTGGGTGG...GTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp TACATCCTGCCTTGTTCCAAACAAGATTCAAGGTGGGGTATTCAATTAAGTTTAACACGTGACACTGCCTaGCGAGACTTCATTGTCCGT +
Preference number: 4 (lower is better)
Translates to: YILPCSKQDSRWGIQLSLTRDTA*RDFIVR
Trigger: ACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGT...TAAACTTAATTGAATACCCCACCTTGAATCTTGTTTGGAACAAGGCAGGATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CCA 90 bp CCAAGTCATCTCTGTATTGCTTGTAGACAGACTGGAGGGCATGGAGAGCTTCGATTTGAAGTTGCTGTTTaGCTGAAATCAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PSHLCIACRQTGGHGELRFEVAV*LKSVCF
Trigger: AAAACAGACTGATTTCAGCCAAACAGCAACTTCAAA...TCGAAGCTCTCCATGCCCTCCAGTCTGTCTACAAGCAATACAGAGATGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATTCCATTGCTCTTCATaGGCAGCACTGAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLFHCSS*AALKAL
Trigger: CAGTGCCTTCAGTGCTGCCCATGAAGAGCAATGGAA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAATGGGCTTCTAGTTTATaGATACGTGCAGCCCTGATA +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEWASSL*IRAALI
Trigger: TATCAGGGCTGCACGTATCCATAAACTAGAAGCCCA...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCACACTGTGCCAAAATTTaGGATGTCTCCTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSHCAKI*DVSFCS
Trigger: GGAACAAAAGGAGACATCCCAAATTTTGGCACAGTG...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCACAACATATGGGTGTaGCTGCAGGTGGCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYHNIWV*LQVACS
Trigger: CGAGCAAGCCACCTGCAGCCACACCCATATGTTGTG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTCACAACATATGGGTGTaGCTGCAGGTGGCTTGCTCG +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFHNIWV*LQVACS
Trigger: CGAGCAAGCCACCTGCAGCCACACCCATATGTTGTG...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCACATTTCAATATAACATaGATGGTGCCAGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSHFNIT*MVPAGC
Trigger: GCATCCTGCTGGCACCATCCATGTTATATTGAAATG...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCATCTTTGAACAACTTCTaGCTCTTCGCTGCGAATGAA +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPSLNNF*LFAANE
Trigger: TTCATTCGCAGCGAAGAGCCAGAAGTTGTTCAAAGA...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAGCTAACAGAGGATGCTaGAGGAAGTCTTTGAACAAC +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAANRGC*RKSLNN
Trigger: GTTGTTCAAAGACTTCCTCCAGCATCCTCTGTTAGC...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCACTTGGAGATAGGACCTaGAATAATACAGTCATCACT +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSLGDRT*NNTVIT
Trigger: AGTGATGACTGTATTATTCCAGGTCCTATCTCCAAG...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCCTTGGAGATAGGACCTaGAATAATACAGTCATCACT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFLGDRT*NNTVIT
Trigger: AGTGATGACTGTATTATTCCAGGTCCTATCTCCAAG...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCATCAACAAACAGCCGTTaGATAGTGTCATCCATGGTT +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSSTNSR*IVSSMV
Trigger: AACCATGGATGACACTATCCAACGGCTGTTTGTTGA...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCCCACTGCCCACTCTTaGGTTTTGGAAGTGACACGG +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYPTAHS*VLEVTR
Trigger: CCGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATACCCAGATACACCCTaGCACTGTACTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLYPDTP*HCTGLM
Trigger: CATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAATACCCAGATACACCCTaGCACTGTACTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQYPDTP*HCTGLM
Trigger: CATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTA...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAAGCAACACCTTAAGCTaGTATCTGTGTGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQSNTLS*YLCGKA
Trigger: GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCT...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAGGTGCAGTCCACTGGTaGCACTTTGAAATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQGAVHW*HFEMEV
Trigger: CACTTCCATTTCAAAGTGCCACCAGTGGACTGCACC...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CCA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGGCCACACACTCTACCTaGCCCTTTAATGAGTTTAGG +
Preference number: 4 (lower is better)
Translates to: QKRNQASESQILKTAIIMATHST*PFNEFR
Trigger: CCTAAACTCATTAAAGGGCCAGGTAGAGTGTGTGGC...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp AAGCAATTTTCCTGCCTCAACCTCCGAGTAGCTAGGATTACAGGCTTGTGCCACTGCTTTATTTTAGCGTaGTTATGGACAGAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: KQFSCLNLRVARITGLCHCFILA*LWTEAF
Trigger: AAAAGCTTCTGTCCATAACCACGCTAAAATAAAGCA...GTGGCACAAGCCTGTAATCCTAGCTACTCGGAGGTTGAGGCAGGAAAATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568653.7
CDS-3UTR TCA 90 bp GTAGATCACATTGCTATAGTTATAGTAGACCCACTGCCCACTCTTGGGTTTTGGTTTTCCTTCCATTGCTaGAAGAGCATTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VDHIAIVIVDPLPTLGFWFSFHC*KSIAFL
Trigger: GAGAAAAGCAATGCTCTTTCAGCAATGGAAGGAAAA...CCAAAACCCAAGAGTGGGCAGTGGGTCTACTATAACTATAGCAATGTGATCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAACTTCATGGGCAGCACTaGAGGCACTGTCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQLHGQH*RHCHKV
Trigger: AACTTTATGACAGTGCCTTCAGTGCTGCCCATGAAG...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCTTCATGGGCAGCACTaGAGGCACTGTCATAAAGTT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLHGQH*RHCHKV
Trigger: AACTTTATGACAGTGCCTTCAGTGCTGCCCATGAAG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTAAGGCAGTCTCGAGCTaGGCAATCTGCACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFKAVSS*AICTFS
Trigger: GCTGAAAGTGCAGATTGCTCAGCTCGAGACTGCCTT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATAAGGCAGTCTCGAGCTaGGCAATCTGCACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHKAVSS*AICTFS
Trigger: GCTGAAAGTGCAGATTGCTCAGCTCGAGACTGCCTT...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCACCGTTTCTGCATaGGTTGCTTGCAGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYCTVSA*VACSSL
Trigger: GAGAGAGCTGCAAGCAACTCATGCAGAAACGGTGCA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGTTTTGGGTGCTTGCTaGCTTAACGACTGCATATGC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLVLGAC*LNDCIC
Trigger: GCATATGCAGTCGTTAAGTCAGCAAGCACCCAAAAC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTGTTTTGGGTGCTTGCTaGCTTAACGACTGCATATGC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTVLGAC*LNDCIC
Trigger: GCATATGCAGTCGTTAAGTCAGCAAGCACCCAAAAC...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAGTTTTGGGTGCTTGCTaGCTTAACGACTGCATATGC +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAVLGAC*LNDCIC
Trigger: GCATATGCAGTCGTTAAGTCAGCAAGCACCCAAAAC...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATCTGTAGAACTGAGTTaGGCAGTTTTGGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLSVELS*AVLGAC
Trigger: GCAAGCACCCAAAACTGCTCAACTCAGTTCTACAGA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTCTGTAGAACTGAGTTaGGCAGTTTTGGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTSVELS*AVLGAC
Trigger: GCAAGCACCCAAAACTGCTCAACTCAGTTCTACAGA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCATCTGTAGAACTGAGTTaGGCAGTTTTGGGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYASVELS*AVLGAC
Trigger: GCAAGCACCCAAAACTGCTCAACTCAGTTCTACAGA...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTCATCCATGGTTACTTaGGAATCATTAAGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFSSMVT*ESLRLR
Trigger: TCTAAGCCTTAATGATTCTCAAGTAACCATGGATGA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACGATATTTTGCTCAATaGGGTCCCTCCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYARYFAQ*GPSLPE
Trigger: TTCAGGAAGGGAGGGACCTCATTGAGCAAAATATCG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAACATGTGAGCATTTACTaGGGAGTAGGAGATGCCTCT +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKHVSIY*GVGDAS
Trigger: AGAGGCATCTCCTACTCCTCAGTAAATGCTCACATG...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCATTCTCTCATCTTGTCTaGGATATACATTCCATACAG +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSFSHLV*DIHSIQ
Trigger: CTGTATGGAATGTATATCTCAGACAAGATGAGAGAA...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTTCTCAAACAGATTATaGAACCCAACTGAAGTATCC +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFFSNRL*NPTEVS
Trigger: GGATACTTCAGTTGGGTTTCATAATCTGTTTGAGAA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCATTTTGTGGTAACGAATaGATGGCAGGAACAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAFCGNE*MAGTAE
Trigger: TTCTGCTGTTCCTGCCATTCATTCGTTACCACAAAA...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAACCTCTCCAATCACATaGCCACTTCTCAGCCCACAT +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLITSPIT*PLLSPH
Trigger: ATGTGGGCTGAGAAGTGGTCATGTGATTGGAGAGGT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTTTGTTGTGGGAACATaGGTGCACGCAAAACCTCTC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTFVVGT*VHAKPL
Trigger: GAGAGGTTTTGCGTGCACTCATGTTCCCACAACAAA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGTACACTGCCTTCTTGTaGAACCTTGGGAACATGTGG +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRYTAFL*NLGNMW
Trigger: CCACATGTTCCCAAGGTTTCACAAGAAGGCAGTGTA...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAATCTACTTGGGAGGCTaGGGCAGGAAAATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGIYLGG*GRKIAG
Trigger: TCCAGCGATTTTCCTGCCTCAGCCTCCCAAGTAGAT...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AAAGTAAAACGAACTTTCAGGAGGTTAAATGGCTTGAACATACATACCACAGGCCCACAGAGTAGAAACTaGACTGGAACCACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: KVKRTFRRLNGLNIHTTGPQSRN*TGTTSL
Trigger: TAAGGAGGTGGTTCCAGTTCAGTTTCTACTCTGTGG...GCCTGTGGTATGTATGTTCAAGCCATTTAACCTCCTGAAAGTTCGTTTTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp AAAGTAAAACGAACTTTCAGGAGGTTAAATGGCTTGAACATACATACCACAGGCATGCCAGTGGGTTGTTaGAGTCCACAGAGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: KVKRTFRRLNGLNIHTTGMPVGC*SPQSRN
Trigger: GTTTCTACTCTGTGGACTTCAACAACCCACTGGCAT...GCCTGTGGTATGTATGTTCAAGCCATTTAACCTCCTGAAAGTTCGTTTTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp CAGTGGTGTGAGATCGAGAGGCATTTAGAGCTTTTGGGTCATAGTGTTCATTGGAGTAAGGTTGTCATATaGATGAGACGTCAACCTAAA +
Preference number: 4 (lower is better)
Translates to: QWCEIERHLELLGHSVHWSKVVI*MRRQPK
Trigger: TTTAGGTTGACGTCTCATTCATATGACAACCTTACT...CCAATGAACACTATGACCCAAAAGCTCTAAATGCCTCTCGATCTCACACCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATCACAGGCAAGTCTCCTaGAGTCTCATCAGTTGGACC +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHHRQVS*SLISWT
Trigger: GGTCCAACTGATGAGACTGCAGGAGACTTGCCTGTG...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAAGGATCTCAGCCAAGTaGTCTAACTCCTCTATCTGG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLRISAK*SNSSIW
Trigger: CCAGATAGAGGAGTTAGAGCACTTGGCTGAGATCCT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAATTGTTTCTCAAGACTaGAGCATTTTAAACGCTGCT +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSIVSQD*SILNAA
Trigger: AGCAGCGTTTAAAATGCTGCAGTCTTGAGAAACAAT...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCATCTTACGGGTCACTaGCTCAACCTCCATCTGATA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTHLTGH*LNLHLI
Trigger: TATCAGATGGAGGTTGAGGCAGTGACCCGTAAGATG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTGTTCCAATCAAACTTaGTGTACAAAATATTCGGCC +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNCSNQT*CTKYSA
Trigger: GGCCGAATATTTTGTACAGCAAGTTTGATTGGAACA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCATCGATAAAGTCGAATTaGTTGATCCATGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSSIKSN*LIHGNS
Trigger: AGAGTTCCCATGGATCAAGCAATTCGACTTTATCGA...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGATACACCTGTCATGTaGCAACGAAATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLDTPVM*QRNQRH
Trigger: GTGCCTCTGATTTCGTTGGCACATGACAGGTGTATC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTGATACACCTGTCATGTaGCAACGAAATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTDTPVM*QRNQRH
Trigger: GTGCCTCTGATTTCGTTGGCACATGACAGGTGTATC...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTTCACCATCTGCTCGTaGATCAAAAACATCGATATT +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNFTICS*IKNIDI
Trigger: AATATCGATGTTTTTGATGCACGAGCAGATGGTGAA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAACTGAGGAGTAGGAGATaGCTCTGGAGCATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQLRSRR*LWSICF
Trigger: AAAGCAAATGCTCCAGAGGCATCTCCTACTCCTCAG...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACTGAGGAGTAGGAGATaGCTCTGGAGCATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLRSRR*LWSICF
Trigger: AAAGCAAATGCTCCAGAGGCATCTCCTACTCCTCAG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAATCCTAAGAAGTCAGTaGAATCTGGTTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEILRSQ*NLVLLP
Trigger: AGGGAGAAGAACCAGATTGCACTGACTTCTTAGGAT...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCATTACCTCATCTACACTaGCTTCTTGTGAAACCTTGG +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMALPHLH*LLVKPW
Trigger: CCAAGGTTTCACAAGAAGGCAGTGTAGATGAGGTAA...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCAGCCCGGGAGACAATaGGAGACTCTGTTTGATATT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTQPGRQ*ETLFDI
Trigger: AATATCAAACAGAGTCTCGCATTGTCTCCCGGGCTG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563746.5
ENST00000647211.2
CDS-3UTR GCA 90 bp AAAGTAAAACGAACTTTCAGGAGGTTAAATGGCTTGAACATACATACCACAGGCCCACCCAATGGCCTGTaGACAAAAGTAAGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: KVKRTFRRLNGLNIHTTGPPNGL*TKVRLS
Trigger: TGACAACCTTACTTTTGTGCACAGGCCATTGGGTGG...GCCTGTGGTATGTATGTTCAAGCCATTTAACCTCCTGAAAGTTCGTTTTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCGTTTCCAGGTGGAACTaGAATTTAGTCCAATTGAAT +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFVSRWN*NLVQLN
Trigger: ATTCAATTGGACTAAATTGCAGTTCCACCTGGAAAC...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CCA 90 bp AGCAAAGTTAAATATGTTCCAGAGACTGAAGTGATGTTTTCATTAGTAAACCCCTGCAGTCTCATCAGTTaGACCAGACATGGCCTAGCG +
Preference number: 4 (lower is better)
Translates to: SKVKYVPETEVMFSLVNPCSLIS*TRHGLA
Trigger: CGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCA...GGGGTTTACTAATGAAAACATCACTTCAGTCTCTGGAACATATTTAACTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCAGTCTCATCAGTTaGACCAGACATGGCCTAGCG +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYCSLIS*TRHGLA
Trigger: CGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATTTCCATTGCTCTTCATaGGCAGCACTGAAGGCACTG +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHFHCSS*AALKAL
Trigger: CAGTGCCTTCAGTGCTGCCCATGAAGAGCAATGGAA...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAGAATTGCTTGATCCATaGGAACTCTTAATCGGAACC +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAELLDP*ELLIGT
Trigger: GGTTCCGATTAAGAGTTCCCATGGATCAAGCAATTC...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGCTCGGGACTGCAGGTaGTTGCAACATCTTATTGTA +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLARDCR*LQHLIV
Trigger: TACAATAAGATGTTGCAACCACCTGCAGTCCCGAGC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATACAGACTGGAGGGCATaGAGAGCTTCGACTGTTACC +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHTDWRA*RASTVT
Trigger: GGTAACAGTCGAAGCTCTCCATGCCCTCCAGTCTGT...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATTACCCAGATACACCCTaGCACTGTACTGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHYPDTP*HCTGLM
Trigger: CATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTA...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCGTGACAACAAACATGTaGTTGTTTACTAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCVTTNM*LFTRTG
Trigger: TCCAGTCCTAGTAAACAACCACATGTTTGTTGTCAC...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAGAAGTCAGTGCAATCTaGTTCTTCTCCCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKEVSAI*FFSLQK
Trigger: CTTCTGCAGGGAGAAGAACCAGATTGCACTGACTTC...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACAATGTGACAGAAACATaGCTGTTTCTCTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNNVTET*LFLSSC
Trigger: ACAAGATGAGAGAAACAGCCATGTTTCTGTCACATT...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAAGCAACACCTTAAGCTaGTATCTGTGTGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLISNTLS*YLCGKA
Trigger: GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTAAGTGCTGCGTGCACTaGTCTAGTTACACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTKCCVH*SSYTKK
Trigger: CTTCTTGGTGTAACTAGACCAGTGCACGCAGCACTT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGGACAATGCGAGACTCTaGGAATGCCAGCTCATTGTT +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRDNARL*ECQLIV
Trigger: AACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTC...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680193.1
3UTR CAA 72 bp AGTCAGTGGTGTGAGATCGAGAGGCATTTAGAGCTTTaGGGTCATAGTGTTCATTGGATCATTATTCTCGTA +
Preference number: 4 (lower is better)
Translates to: SQWCEIERHLEL*GHSVHWIIILV
Trigger: TACGAGAATAATGATCCAATGAACACTATGACCCAAAAGCTCTAAATGCCTCTCGATCTCACACCACTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR CAA 72 bp AGGAAGACTGTAGAATCGACACTCAACAAACAGCCGTaGGATAGTGTCATCCATGGTTACTTGAGAATCATT +
Preference number: 4 (lower is better)
Translates to: RKTVESTLNKQP*DSVIHGYLRII
Trigger: AATGATTCTCAAGTAACCATGGATGACACTATCCAACGGCTGTTTGTTGAGTGTCGATTCTACAGTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATCTTTTCTCCTCAACTaGGTTTTCAGGATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLSFLLN*VFRISA
Trigger: GGCTGAGATCCTGAAAACTCAGTTGAGGAGAAAAGA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAATCTTTTCTCCTCAACTaGGTTTTCAGGATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQSFLLN*VFRISA
Trigger: GGCTGAGATCCTGAAAACTCAGTTGAGGAGAAAAGA...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCACGAATATTTGACCTTTaGTCTGTAGCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMARIFDL*SVACCS
Trigger: AGAACAGCAAGCTACAGATCAAAGGTCAAATATTCG...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACATAGGTACAGAAAGTaGCAGGCTCTTTATCTCCAG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLHRYRK*QALYLQ
Trigger: CTGGAGATAAAGAGCCTGTCACTTTCTGTACCTATG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACATAGGTACAGAAAGTaGCAGGCTCTTTATCTCCAG +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAHRYRK*QALYLQ
Trigger: CTGGAGATAAAGAGCCTGTCACTTTCTGTACCTATG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATAAGTTATATTCGGGATaGAGGCCTCGCACTACGGGA +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHKLYSG*RPRTTG
Trigger: TCCCGTAGTGCGAGGCCTTCATCCCGAATATAACTT...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTGCTCTTCGCTGCGAATaGAATTTCCTAAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTALRCE*NFLSLQ
Trigger: CTGAAGACTTAGGAAATTTCATTCGCAGCGAAGAGC...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGCTCTTCGCTGCGAATaGAATTTCCTAAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLALRCE*NFLSLQ
Trigger: CTGAAGACTTAGGAAATTTCATTCGCAGCGAAGAGC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAGCTCTTCGCTGCGAATaGAATTTCCTAAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQALRCE*NFLSLQ
Trigger: CTGAAGACTTAGGAAATTTCATTCGCAGCGAAGAGC...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACGCTGGAGGAAGTCTTTaGACAACTTCTGGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYAGGSL*TTSGSS
Trigger: CGAAGAGCCAGAAGTTGTTCAAAGACTTCCTCCAGC...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAACACTCTGATGTGGCATaGTATCCACGAAAGATACCT +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQHSDVA*YPRKIP
Trigger: AGGTATCTTTCGTGGATATCATGCCACATCAGAGTG...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACACTCTGATGTGGCATaGTATCCACGAAAGATACCT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLHSDVA*YPRKIP
Trigger: AGGTATCTTTCGTGGATATCATGCCACATCAGAGTG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGTGAAACATCACTCTaGTGTGGCATGATATCCACG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLCETSL*CGMIST
Trigger: CGTGGATATCATGCCACATCAGAGTGATGTTTCACA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000563746.5
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAATCACTGTCAGAAGCTaGCATGTCCTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLITVRS*HVLFNF
Trigger: GAAGTTGAAGAGGACATGTCAGCTTCTGACAGTGAT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATCTTCGACTGTTACCCTaGGCTTGCCAATACCTTCAC +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHLRLLP*ACQYLH
Trigger: GTGAAGGTATTGGCAAGCTCAGGGTAACAGTCGAAG...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACGGAGAACTTAAGTCCTaGGGGGTGGCAGTTATGAGA +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYGELKS*GVAVMR
Trigger: TCTCATAACTGCCACCCCTCAGGACTTAAGTTCTCC...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCAGAGCCAGCCGAAGTaGCAACAAACATGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYQSQPK*QQTCGC
Trigger: ACAACCACATGTTTGTTGTCACTTCGGCTGGCTCTG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp CCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAAAACAGCCATCATCATaGCTAAAACCCAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: PNSENDISLGNLARYHSPKQPSS*LKPNSK
Trigger: CTTTGAGTTGGGTTTTAGTCATGATGATGGCTGTTT...TGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp TTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACGTTTTCTCTTTCCCTTaGGGCACATCCATTAAGCAT +
Preference number: 4 (lower is better)
Translates to: FPPNSENDISLGNLARYHVFSFP*GTSIKH
Trigger: ATGCTTAATGGATGTGCCTCAAGGGAAAGAGAAAAC...GTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp TTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACTCCTGCTTGCGGGCATaGTGTTTAAGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: FPPNSENDISLGNLARYHSCLRA*CLSKMF
Trigger: GAACATTTTACTTAAACAGCATGCCCGCAAGCAGGA...GTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAACCAGCATTTTCATTTaGTTTTCTACGCCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMATSIFI*FSTPSV
Trigger: AACACTGGGCGTAGAAAAGCAAATGAAAATGCTGGT...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTGGGATGTGGAGTTTCTaGTACATCTGCATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTGMWSF*YICILE
Trigger: TTCCAAGATGCAGATGTAGCAGAAACTCCACATCCC...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCACAGCATTTTAAACGCTaGTCTTTAAGTTGCATGTTT +
Preference number: 4 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSQHFKR*SLSCMF
Trigger: AAACATGCAACTTAAAGAGCAGCGTTTAAAATGCTG...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTCCTTTAACTTCCATTaGTCTTCATGGGCAGCACTG +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTSFNFH*SSWAAL
Trigger: CAGTGCTGCCCATGAAGAGCAATGGAAGTTAAAGGA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACGTTTCTGCATGAGTTaGTTGCAGCTCTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYARFCMS*LQLSHR
Trigger: TCTATGAGAGAGCTGCAAGCAACTCATGCAGAAACG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCTCTTGCACCGTTTCTaGATGAGTTGCTTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYLLHRF*MSCLQL
Trigger: GAGCTGCAAGCAACTCATGCAGAAACGGTGCAAGAG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGTGCTAACAGAGGATaGTGGAGGAAGTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLCANRG*WRKSLN
Trigger: GTTCAAAGACTTCCTCCAGCATCCTCTGTTAGCACA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAATGTGCTAACAGAGGATaGTGGAGGAAGTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKCANRG*WRKSLN
Trigger: GTTCAAAGACTTCCTCCAGCATCCTCTGTTAGCACA...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCATGTGCTAACAGAGGATaGTGGAGGAAGTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYACANRG*WRKSLN
Trigger: GTTCAAAGACTTCCTCCAGCATCCTCTGTTAGCACA...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAAGAGGGCCACACGTCAAGAAACATGATTaGATCTGTTTGTCTCGTAAT +
Preference number: 4 (lower is better)
Translates to: NDISLGNLARYHSPRGPHVKKHD*ICLSRN
Trigger: ATTACGAGACAAACAGATGCAATCATGTTTCTTGAC...GTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAATTTTATACCTTTCCTaGGGCATTCCTGTAAACCAG +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEILYLS*GIPVNQ
Trigger: CTGGTTTACAGGAATGCCCCAGGAAAGGTATAAAAT...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAGCCATCAAAGCATCGTaGCTGATTCTGAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAAIKAS*LILRVL
Trigger: AAGAACTCTCAGAATCAGCCACGATGCTTTGATGGC...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTGCCATCAAAGCATCGTaGCTGATTCTGAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTAIKAS*LILRVL
Trigger: AAGAACTCTCAGAATCAGCCACGATGCTTTGATGGC...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAATGGGCTTCTAGTTTATaGATACGTGCAGCCCTGATA +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKWASSL*IRAALI
Trigger: TATCAGGGCTGCACGTATCCATAAACTAGAAGCCCA...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTGGGCTTCTAGTTTATaGATACGTGCAGCCCTGATA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTWASSL*IRAALI
Trigger: TATCAGGGCTGCACGTATCCATAAACTAGAAGCCCA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCCTCGTTCTAAGTGGATaGTTTCATCAAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFLVLSG*FHQIHQ
Trigger: TTGATGAATTTGATGAAACCATCCACTTAGAACGAG...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAGCTCGGGACTGCAGGTaGTTGCAACATCTTATTGTA +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIARDCR*LQHLIV
Trigger: TACAATAAGATGTTGCAACCACCTGCAGTCCCGAGC...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGCTAACAGAGGATGCTaGAGGAAGTCTTTGAACAAC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLANRGC*RKSLNN
Trigger: GTTGTTCAAAGACTTCCTCCAGCATCCTCTGTTAGC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATAGTAGGAGATGCCTCTaGAGCATTTGCTTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHSRRCL*SICFQA
Trigger: GGCTTGAAAGCAAATGCTCCAGAGGCATCTCCTACT...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAGAAGATTTGCAGAGTTaGATGAGAGCAAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAEDLQS*MRARFF
Trigger: GAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTC...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAAATGTGACAGAAACATaGCTGTTTCTCTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPNVTET*LFLSSC
Trigger: ACAAGATGAGAGAAACAGCCATGTTTCTGTCACATT...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAAAGTGCTGCGTGCACTaGTCTAGTTACACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIKCCVH*SSYTKK
Trigger: CTTCTTGGTGTAACTAGACCAGTGCACGCAGCACTT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAATTTATGTTTTGTTGTaGGAACATGAGTGCACGCAA +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPIYVLL*EHECTQ
Trigger: TTGCGTGCACTCATGTTCCCACAACAAAACATAAAT...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAGAGGGTGCAGTCCACTaGTGGCACTTTGAAATGGAA +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGEGAVH*WHFEME
Trigger: TTCCATTTCAAAGTGCCACCAGTGGACTGCACCCTC...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAAACCTTGGGAACATGTaGAACAGTCAGCATATTAAT +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSNLGNM*NSQHIN
Trigger: ATTAATATGCTGACTGTTCCACATGTTCCCAAGGTT...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAGAATCATACGTGATCTaGCAAAGTCTGAGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: PNSENDISLGNLARYHSPESYVI*QSLSAY
Trigger: ATAAGCACTCAGACTTTGCCAGATCACGTATGATTC...TGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGTATCACTGGGAAATTTaGCCAGGTATCACAGTCCAA +
Preference number: 4 (lower is better)
Translates to: QKRNQASESQILKTAIIMYHWEI*PGITVQ
Trigger: TTGGACTGTGATACCTGGCCAAATTTCCCAGTGATA...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR TCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATTCTTTTCTCCTCAACTaGGTTTTCAGGATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHSFLLN*VFRISA
Trigger: GGCTGAGATCCTGAAAACTCAGTTGAGGAGAAAAGA...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCCAGCAGGATGCTTTTaGTGGTCTGTTAACTCAAAT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTPAGCF*WSVNSN
Trigger: ATTTGAGTTAACAGACCATCAAAAGCATCCTGCTGG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGCCAGCAGGATGCTTTTaGTGGTCTGTTAACTCAAAT +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRPAGCF*WSVNSN
Trigger: ATTTGAGTTAACAGACCATCAAAAGCATCCTGCTGG...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTGTCTTCAGTTGTTATTaGTCCACTTGGTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTVFSCY*STWWKV
Trigger: TACCTTCCACCAAGTGGATCAATAACAACTGAAGAC...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCACTCTGATGTGGCATaGTATCCACGAAAGATACCT +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHHSDVA*YPRKIP
Trigger: AGGTATCTTTCGTGGATATCATGCCACATCAGAGTG...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACTTTGTTCTGCAAGCTaGCCTTCAGATAGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYALCSAS*PSDSKD
Trigger: GTCTTTACTATCTGAAGGTCAGCTTGCAGAACAAAG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCTTTGTTCTGCAAGCTaGCCTTCAGATAGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLCSAS*PSDSKD
Trigger: GTCTTTACTATCTGAAGGTCAGCTTGCAGAACAAAG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGCTTTGTTCTGCAAGCTaGCCTTCAGATAGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRLCSAS*PSDSKD
Trigger: GTCTTTACTATCTGAAGGTCAGCTTGCAGAACAAAG...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAACTTTGTTCTGCAAGCTaGCCTTCAGATAGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKLCSAS*PSDSKD
Trigger: GTCTTTACTATCTGAAGGTCAGCTTGCAGAACAAAG...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCGATATTTTGCTCAATaGGGTCCCTCCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYRYFAQ*GPSLPE
Trigger: TTCAGGAAGGGAGGGACCTCATTGAGCAAAATATCG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATCGATATTTTGCTCAATaGGGTCCCTCCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHRYFAQ*GPSLPE
Trigger: TTCAGGAAGGGAGGGACCTCATTGAGCAAAATATCG...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGACGATATTTTGCTCAATaGGGTCCCTCCCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGRYFAQ*GPSLPE
Trigger: TTCAGGAAGGGAGGGACCTCATTGAGCAAAATATCG...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAACCTGTTTGCAAACAGTaGAAACCCACAGCCTATAAA +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKPVCKQ*KPTAYK
Trigger: TTTATAGGCTGTGGGTTTTCACTGTTTGCAAACAGG...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTACATTCCATACAGGTaGCTGGGTCCCATAAGTTTT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTYIPYR*LGPISF
Trigger: AAAACTTATGGGACCCAGTCACCTGTATGGAATGTA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAATTCTCTCATCTTGTCTaGGATATACATTCCATACAG +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEFSHLV*DIHSIQ
Trigger: CTGTATGGAATGTATATCTCAGACAAGATGAGAGAA...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAACTGAAGTATCCACATaGCAGCGTTCAATACTACCT +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKTEVST*QRSILP
Trigger: AGGTAGTATTGAACGCTGTCATGTGGATACTTCAGT...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCATTCTCAAACAGATTATaGAACCCAACTGAAGTATCC +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAFSNRL*NPTEVS
Trigger: GGATACTTCAGTTGGGTTTCATAATCTGTTTGAGAA...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAGTGGCTGGGAATTTaGCATTTCTACTACAGTAGG +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHQWLGI*HFYYSR
Trigger: CCTACTGTAGTAGAAATGTCAAATTCCCAGCCACTG...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATTTTGTTGTGGGAACATaGGTGCACGCAAAACCTCTC +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHFVVGT*VHAKPL
Trigger: GAGAGGTTTTGCGTGCACTCATGTTCCCACAACAAA...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGCCACTGGTGGCACTTTaGAATGGAAGTGAAAATTCT +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRPLVAL*NGSENS
Trigger: AGAATTTTCACTTCCATTTCAAAGTGCCACCAGTGG...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTCAGAAAACAGGTCATaGTCGAAGTCTAAGAGTACC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTSENRS*SKSKST
Trigger: GGTACTCTTAGACTTCGATCATGACCTGTTTTCTGA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAATGCTCTACCTCTGGTaGAATTTCCTTCCTATCTTC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLMLYLW*NFLPIF
Trigger: GAAGATAGGAAGGAAATTTCACCAGAGGTAGAGCAT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAATCCTGCTTGCGGGCATaGTGTTTAAGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKSCLRA*CLSKMF
Trigger: GAACATTTTACTTAAACAGCATGCCCGCAAGCAGGA...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGTCCTGCTTGCGGGCATaGTGTTTAAGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRSCLRA*CLSKMF
Trigger: GAACATTTTACTTAAACAGCATGCCCGCAAGCAGGA...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGTTAATTTTATCCTCCTaGTTGCGGGCATGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: QKRNQASESQILKTAIIMLILSS*LRACCL
Trigger: TAAACAGCATGCCCGCAAGCAGGAGGATAAAATTAA...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACAGGATCTCAGCCAAGTaGTCTAACTCCTCTATCTGG +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYRISAK*SNSSIW
Trigger: CCAGATAGAGGAGTTAGAGCACTTGGCTGAGATCCT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCATTGCTGAAAGAGCATTaGTTTTCTCTACTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMALLKEH*FSLLAV
Trigger: AACAGCTAGTAGAGAAAAGCAATGCTCTTTCAGCAA...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTCATCTTACGGGTCACTaGCTCAACCTCCATCTGATA +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFHLTGH*LNLHLI
Trigger: TATCAGATGGAGGTTGAGGCAGTGACCCGTAAGATG...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAACCAGTATTCCACTGTaGCAAAATTTGGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLTSIPL*QNLGCL
Trigger: GAGACATCCCAAATTTTGGCACAGTGGAATACTGGT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATGATACACCTGTCATGTaGCAACGAAATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHDTPVM*QRNQRH
Trigger: GTGCCTCTGATTTCGTTGGCACATGACAGGTGTATC...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATCTGAGGAGTAGGAGATaGCTCTGGAGCATTTGCTTT +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHLRSRR*LWSICF
Trigger: AAAGCAAATGCTCCAGAGGCATCTCCTACTCCTCAG...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATTGGAGAGGTTTAGTCTaGAGATGTTTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHWRGLV*RCLWSP
Trigger: TGGAGACCACAAACATCTGCAGACTAAACCTCTCCA...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCATCTATTTCTGGTATATaGTCTACCTCTGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSSISGI*STSGEI
Trigger: AATTTCACCAGAGGTAGAGCATATACCAGAAATAGA...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCATTACCTCATCTACACTaGCTTCTTGTGAAACCTTGG +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYALPHLH*LLVKPW
Trigger: CCAAGGTTTCACAAGAAGGCAGTGTAGATGAGGTAA...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGAGAGTCCGCTGTAAATaGGGTAGTAATACATGTCTA +
Preference number: 4 (lower is better)
Translates to: QKRNQASESQILKTAIIMRVRCK*GSNTCL
Trigger: TAGACATGTATTACTACCGCATTTACAGCGGACTCT...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCATTTGAAGTTGCTGTTTaGCTGAAATCAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSFEVAV*LKSVCF
Trigger: AAAACAGACTGATTTCAGCCAAACAGCAACTTCAAA...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAATGTAAACATGGGATGTaGAGTTTCTGCTACATCTGC +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQCKHGM*SFCYIC
Trigger: GCAGATGTAGCAGAAACTCCACATCCCATGTTTACA...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAGCCATCAAAGCATCGTaGCTGATTCTGAGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIAIKAS*LILRVL
Trigger: AAGAACTCTCAGAATCAGCCACGATGCTTTGATGGC...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCACTCGTTCTAAGTGGATaGTTTCATCAAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPLVLSG*FHQIHQ
Trigger: TTGATGAATTTGATGAAACCATCCACTTAGAACGAG...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACACTGTGCCAAAATTTaGGATGTCTCCTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAHCAKI*DVSFCS
Trigger: GGAACAAAAGGAGACATCCCAAATTTTGGCACAGTG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGAATTGCTTGATCCATaGGAACTCTTAATCGGAACC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLELLDP*ELLIGT
Trigger: GGTTCCGATTAAGAGTTCCCATGGATCAAGCAATTC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAGAATTGCTTGATCCATaGGAACTCTTAATCGGAACC +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAELLDP*ELLIGT
Trigger: GGTTCCGATTAAGAGTTCCCATGGATCAAGCAATTC...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAGAATTGCTTGATCCATaGGAACTCTTAATCGGAACC +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKELLDP*ELLIGT
Trigger: GGTTCCGATTAAGAGTTCCCATGGATCAAGCAATTC...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTGCTCGGGACTGCAGGTaGTTGCAACATCTTATTGTA +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFARDCR*LQHLIV
Trigger: TACAATAAGATGTTGCAACCACCTGCAGTCCCGAGC...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCATTTCAATATAACATaGATGGTGCCAGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTHFNIT*MVPAGC
Trigger: GCATCCTGCTGGCACCATCCATGTTATATTGAAATG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTCTTTGAACAACTTCTaGCTCTTCGCTGCGAATGAA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTSLNNF*LFAANE
Trigger: TTCATTCGCAGCGAAGAGCCAGAAGTTGTTCAAAGA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATGCTAACAGAGGATGCTaGAGGAAGTCTTTGAACAAC +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHANRGC*RKSLNN
Trigger: GTTGTTCAAAGACTTCCTCCAGCATCCTCTGTTAGC...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAGCTAACAGAGGATGCTaGAGGAAGTCTTTGAACAAC +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIANRGC*RKSLNN
Trigger: GTTGTTCAAAGACTTCCTCCAGCATCCTCTGTTAGC...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGTCCTCTTCAACTTCTaGTTCCAAGTCCTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLVLFNF*FQVLCY
Trigger: ATAACAGAGGACTTGGAACCAGAAGTTGAAGAGGAC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCATCAACAAACAGCCGTTaGATAGTGTCATCCATGGTT +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYASTNSR*IVSSMV
Trigger: AACCATGGATGACACTATCCAACGGCTGTTTGTTGA...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATCAACAAACAGCCGTTaGATAGTGTCATCCATGGTT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLSTNSR*IVSSMV
Trigger: AACCATGGATGACACTATCCAACGGCTGTTTGTTGA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACAGTAGGAGATGCCTCTaGAGCATTTGCTTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYSRRCL*SICFQA
Trigger: GGCTTGAAAGCAAATGCTCCAGAGGCATCTCCTACT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCTTTTCGAGGATCTaGTTACCCAGATACACCCTG +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYCFSRI*LPRYTL
Trigger: CAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACGTCTGCAGATGTTTGTaGTCTCCAGAAGGTTCCAGA +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYVCRCL*SPEGSR
Trigger: TCTGGAACCTTCTGGAGACCACAAACATCTGCAGAC...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAAAGTGCTGCGTGCACTaGTCTAGTTACACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGKCCVH*SSYTKK
Trigger: CTTCTTGGTGTAACTAGACCAGTGCACGCAGCACTT...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAATTTATGTTTTGTTGTaGGAACATGAGTGCACGCAA +
Preference number: 4 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAIYVLL*EHECTQ
Trigger: TTGCGTGCACTCATGTTCCCACAACAAAACATAAAT...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCTCATCACTCTGATGTaGCATGATATCCACGAAAGA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLITLM*HDIHER
Trigger: TCTTTCGTGGATATCATGCCACATCAGAGTGATGAG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGCTGTTCTCGAAGCTaGAGAAGAGATAACTCAATT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLCCSRS*RRDNSI
Trigger: AATTGAGTTATCTCTTCTTCAGCTTCGAGAACAGCA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACGAATATTTGACCTTTaGTCTGTAGCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLRIFDL*SVACCS
Trigger: AGAACAGCAAGCTACAGATCAAAGGTCAAATATTCG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATTTTCCTTCCATTGCTaGAAGAGCATTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLFSFHC*KSIAFL
Trigger: GAGAAAAGCAATGCTCTTTCAGCAATGGAAGGAAAA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCATTTTCCTTCCATTGCTaGAAGAGCATTGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAFSFHC*KSIAFL
Trigger: GAGAAAAGCAATGCTCTTTCAGCAATGGAAGGAAAA...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACATACTGTTCCACTTTaGGTTCATAATCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAHTVPL*VHNLAA
Trigger: TGCAGCAAGATTATGAACTCAAAGTGGAACAGTATG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAACATACTGTTCCACTTTaGGTTCATAATCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQHTVPL*VHNLAA
Trigger: TGCAGCAAGATTATGAACTCAAAGTGGAACAGTATG...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGCATACTGTTCCACTTTaGGTTCATAATCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRHTVPL*VHNLAA
Trigger: TGCAGCAAGATTATGAACTCAAAGTGGAACAGTATG...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACATACTGTTCCACTTTaGGTTCATAATCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLHTVPL*VHNLAA
Trigger: TGCAGCAAGATTATGAACTCAAAGTGGAACAGTATG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCATAGGTACAGAAAGTaGCAGGCTCTTTATCTCCAG +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYHRYRK*QALYLQ
Trigger: CTGGAGATAAAGAGCCTGTCACTTTCTGTACCTATG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACGCTCTTCGCTGCGAATaGAATTTCCTAAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYALRCE*NFLSLQ
Trigger: CTGAAGACTTAGGAAATTTCATTCGCAGCGAAGAGC...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATCACTCTGATGTGGCATaGTATCCACGAAAGATACCT +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHHSDVA*YPRKIP
Trigger: AGGTATCTTTCGTGGATATCATGCCACATCAGAGTG...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACATCACTGTCAGAAGCTaGCATGTCCTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYITVRS*HVLFNF
Trigger: GAAGTTGAAGAGGACATGTCAGCTTCTGACAGTGAT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGGCTCCCAGCTTCCCATaGATTATAGATTATATACAC +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRAPSFP*IIDYIH
Trigger: GTGTATATAATCTATAATTCATGGGAAGCTGGGAGC...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTGCTCCCAGCTTCCCATaGATTATAGATTATATACAC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTAPSFP*IIDYIH
Trigger: GTGTATATAATCTATAATTCATGGGAAGCTGGGAGC...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGGCCTTCAGGCATGAGTaGCTTATTAAAATGTACTCT +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRAFRHE*LIKMYS
Trigger: AGAGTACATTTTAATAAGTCACTCATGCCTGAAGGC...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATCAGAAAACAGGTCATaGTCGAAGTCTAAGAGTACC +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLISENRS*SKSKST
Trigger: GGTACTCTTAGACTTCGATCATGACCTGTTTTCTGA...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTAAGGTTGTCATATaGATGAGACGTCAACCTAAA +
Preference number: 4 (lower is better)
Translates to: FPPNSENDISLGNLARYHSKVVI*MRRQPK
Trigger: TTTAGGTTGACGTCTCATTCATATGACAACCTTACT...GTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTTAATTTTATCCTCCTaGTTGCGGGCATGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLILSS*LRACCL
Trigger: TAAACAGCATGCCCGCAAGCAGGAGGATAAAATTAA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGACCAGCATTTTCATTTaGTTTTCTACGCCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRTSIFI*FSTPSV
Trigger: AACACTGGGCGTAGAAAAGCAAATGAAAATGCTGGT...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAACAGCATTTTAAACGCTaGTCTTTAAGTTGCATGTTT +
Preference number: 4 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEQHFKR*SLSCMF
Trigger: AAACATGCAACTTAAAGAGCAGCGTTTAAAATGCTG...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCGTTTCTGCATGAGTTaGTTGCAGCTCTCTCATAGA +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYRFCMS*LQLSHR
Trigger: TCTATGAGAGAGCTGCAAGCAACTCATGCAGAAACG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTTGTTTCATATTCTGTaGTATAAGCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLFHIL*YKPGGP
Trigger: AGGTCCACCAGGCTTATAGCACAGAATATGAAACAA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATTGTTTCATATTCTGTaGTATAAGCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLFHIL*YKPGGP
Trigger: AGGTCCACCAGGCTTATAGCACAGAATATGAAACAA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAATTGTTTCATATTCTGTaGTATAAGCCTGGTGGACCT +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQLFHIL*YKPGGP
Trigger: AGGTCCACCAGGCTTATAGCACAGAATATGAAACAA...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAACCAGTATTCCACTGTaGCAAAATTTGGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLITSIPL*QNLGCL
Trigger: GAGACATCCCAAATTTTGGCACAGTGGAATACTGGT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATCGATAAAGTCGAATTaGTTGATCCATGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLSIKSN*LIHGNS
Trigger: AGAGTTCCCATGGATCAAGCAATTCGACTTTATCGA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACTTAACGACTGCATATaGTCTGGCCCCTTAAAATTT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLNDCI*SGPLKF
Trigger: AAATTTTAAGGGGCCAGAGCATATGCAGTCGTTAAG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACTTAACGACTGCATATaGTCTGGCCCCTTAAAATTT +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYALNDCI*SGPLKF
Trigger: AAATTTTAAGGGGCCAGAGCATATGCAGTCGTTAAG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAACTTAACGACTGCATATaGTCTGGCCCCTTAAAATTT +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKLNDCI*SGPLKF
Trigger: AAATTTTAAGGGGCCAGAGCATATGCAGTCGTTAAG...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTGCTAACAGAGGATaGTGGAGGAAGTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGCANRG*WRKSLN
Trigger: GTTCAAAGACTTCCTCCAGCATCCTCTGTTAGCACA...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAATTCATCTTCAGAAGATaGCAAGCTTTGTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKFIFRR*QALFCK
Trigger: CTTGCAGAACAAAGCTTGGCATCTTCTGAAGATGAA...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTTCATCTTCAGAAGATaGCAAGCTTTGTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTFIFRR*QALFCK
Trigger: CTTGCAGAACAAAGCTTGGCATCTTCTGAAGATGAA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCATTCATCTTCAGAAGATaGCAAGCTTTGTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAFIFRR*QALFCK
Trigger: CTTGCAGAACAAAGCTTGGCATCTTCTGAAGATGAA...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATTCATCTTCAGAAGATaGCAAGCTTTGTTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLFIFRR*QALFCK
Trigger: CTTGCAGAACAAAGCTTGGCATCTTCTGAAGATGAA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAAAAACATCGATATTTTaGTCAATGAGGTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLKTSIF*SMRSLP
Trigger: AGGGAGGGACCTCATTGAGCAAAATATCGATGTTTT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAAAAACATCGATATTTTaGTCAATGAGGTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAKTSIF*SMRSLP
Trigger: AGGGAGGGACCTCATTGAGCAAAATATCGATGTTTT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAAATACCTTCACCATCTaGTCGTGCATCAAAAACATC +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLNTFTI*SCIKNI
Trigger: GATGTTTTTGATGCACGAGCAGATGGTGAAGGTATT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGAATACCTTCACCATCTaGTCGTGCATCAAAAACATC +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRNTFTI*SCIKNI
Trigger: GATGTTTTTGATGCACGAGCAGATGGTGAAGGTATT...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAAATACCTTCACCATCTaGTCGTGCATCAAAAACATC +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQNTFTI*SCIKNI
Trigger: GATGTTTTTGATGCACGAGCAGATGGTGAAGGTATT...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGGAGAGGTTTAGTCTaGAGATGTTTGTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYWRGLV*RCLWSP
Trigger: TGGAGACCACAAACATCTGCAGACTAAACCTCTCCA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAATCCTAAGAAGTCAGTaGAATCTGGTTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIILRSQ*NLVLLP
Trigger: AGGGAGAAGAACCAGATTGCACTGACTTCTTAGGAT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATATCCTAAGAAGTCAGTaGAATCTGGTTCTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHILRSQ*NLVLLP
Trigger: AGGGAGAAGAACCAGATTGCACTGACTTCTTAGGAT...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp CCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAGTCAAGAAACATGATTaGATCTGTTTGTCTCGTAAT +
Preference number: 4 (lower is better)
Translates to: PNSENDISLGNLARYHSPVKKHD*ICLSRN
Trigger: ATTACGAGACAAACAGATGCAATCATGTTTCTTGAC...TGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTATTTTATACCTTTCCTaGGGCATTCCTGTAAACCAG +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTILYLS*GIPVNQ
Trigger: CTGGTTTACAGGAATGCCCCAGGAAAGGTATAAAAT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATGTAAACATGGGATGTaGAGTTTCTGCTACATCTGC +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLICKHGM*SFCYIC
Trigger: GCAGATGTAGCAGAAACTCCACATCCCATGTTTACA...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATTGTAAACATGGGATGTaGAGTTTCTGCTACATCTGC +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHCKHGM*SFCYIC
Trigger: GCAGATGTAGCAGAAACTCCACATCCCATGTTTACA...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATACATTTCAATATAACATaGATGGTGCCAGCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIHFNIT*MVPAGC
Trigger: GCATCCTGCTGGCACCATCCATGTTATATTGAAATG...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATCTTTGAACAACTTCTaGCTCTTCGCTGCGAATGAA +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLISLNNF*LFAANE
Trigger: TTCATTCGCAGCGAAGAGCCAGAAGTTGTTCAAAGA...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTAACATCACTCTGATGTaGCATGATATCCACGAAAGA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTNITLM*HDIHER
Trigger: TCTTTCGTGGATATCATGCCACATCAGAGTGATGTT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000563746.5
CDS-3UTR CCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAACAGATCATACTCTACTaGTCCCACAATGTACATCAA +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQQIILY*SHNVHQ
Trigger: TTGATGTACATTGTGGGACCAGTAGAGTATGATCTG...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACAGATCATACTCTACTaGTCCCACAATGTACATCAA +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLQIILY*SHNVHQ
Trigger: TTGATGTACATTGTGGGACCAGTAGAGTATGATCTG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCAGATCATACTCTACTaGTCCCACAATGTACATCAA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTQIILY*SHNVHQ
Trigger: TTGATGTACATTGTGGGACCAGTAGAGTATGATCTG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACAGATCATACTCTACTaGTCCCACAATGTACATCAA +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAQIILY*SHNVHQ
Trigger: TTGATGTACATTGTGGGACCAGTAGAGTATGATCTG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGGTGACAACAAACATGTaGTTGTTTACTAGGACTGGA +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRVTTNM*LFTRTG
Trigger: TCCAGTCCTAGTAAACAACCACATGTTTGTTGTCAC...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTCCTTTTCCACCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTAGAATGATATATCACTaGGAAATTTGGCCAGGTATC +
Preference number: 4 (lower is better)
Translates to: FLFHLIPRMIYHWEIWPGRMIYH*EIWPGI
Trigger: GATACCTGGCCAAATTTCCCAGTGATATATCATTCT...ACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGGTGGAAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
3UTR CAA 72 bp CTCAGCCCACATGTCTTCATAACACATAGAAATTATTaGTGTTTTGTGGTAACGAATGAATGGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LSPHVFITHRNY*CFVVTNEWQEQ
Trigger: CTGTTCCTGCCATTCATTCGTTACCACAAAACACAAATAATTTCTATGTGTTATGAAGACATGTGGGCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAACTGATATCAAGAAGATaGACATACTGTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQLISRR*TYCSTL
Trigger: CAAAGTGGAACAGTATGTTCATCTTCTTGATATCAG...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACTGATATCAAGAAGATaGACATACTGTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLISRR*TYCSTL
Trigger: CAAAGTGGAACAGTATGTTCATCTTCTTGATATCAG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCTGATATCAAGAAGATaGACATACTGTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLISRR*TYCSTL
Trigger: CAAAGTGGAACAGTATGTTCATCTTCTTGATATCAG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATCCAGCAGGATGCTTTTaGTGGTCTGTTAACTCAAAT +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHPAGCF*WSVNSN
Trigger: ATTTGAGTTAACAGACCATCAAAAGCATCCTGCTGG...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCCTGTTTGCAAACAGTaGAAACCCACAGCCTATAAA +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYPVCKQ*KPTAYK
Trigger: TTTATAGGCTGTGGGTTTTCACTGTTTGCAAACAGG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAAGGAACGAGTTGTTATaGAGATTTGCAGAGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIRNELL*RFAELD
Trigger: ATCCAACTCTGCAAATCTTCATAACAACTCGTTCCT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATTCTCTCATCTTGTCTaGGATATACATTCCATACAG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLFSHLV*DIHSIQ
Trigger: CTGTATGGAATGTATATCTCAGACAAGATGAGAGAA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAATTATGAAACCCAACTaGAGTATCCACATGACAGCG +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGIMKPN*SIHMTA
Trigger: CGCTGTCATGTGGATACTTCAGTTGGGTTTCATAAT...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACATTATGAAACCCAACTaGAGTATCCACATGACAGCG +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYIMKPN*SIHMTA
Trigger: CGCTGTCATGTGGATACTTCAGTTGGGTTTCATAAT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGTTCTCAAACAGATTATaGAACCCAACTGAAGTATCC +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRFSNRL*NPTEVS
Trigger: GGATACTTCAGTTGGGTTTCATAATCTGTTTGAGAA...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCCACTGGTGGCACTTTaGAATGGAAGTGAAAATTCT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYPLVAL*NGSENS
Trigger: AGAATTTTCACTTCCATTTCAAAGTGCCACCAGTGG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp AAAGTAAAACGAACTTTCAGGAGGTTAAATGGCTTGAACATACATACCACAGGCAGGTTGTCATATGAATaGGACGTCAACCTAAATATC +
Preference number: 4 (lower is better)
Translates to: KVKRTFRRLNGLNIHTTGRLSYE*DVNLNI
Trigger: GATATTTAGGTTGACGTCTCATTCATATGACAACCT...GCCTGTGGTATGTATGTTCAAGCCATTTAACCTCCTGAAAGTTCGTTTTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR GCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATCCTGCTTGCGGGCATaGTGTTTAAGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGSCLRA*CLSKMF
Trigger: GAACATTTTACTTAAACAGCATGCCCGCAAGCAGGA...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTCCTGCTTGCGGGCATaGTGTTTAAGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYSCLRA*CLSKMF
Trigger: GAACATTTTACTTAAACAGCATGCCCGCAAGCAGGA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGCAAAGTTAAATATGTTCCAGAGACTGAAGTGATGTTTTCATTAGTAAACCCCTCCTGCTTGCGGGCATaGTGTTTAAGTAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: SKVKYVPETEVMFSLVNPSCLRA*CLSKMF
Trigger: GAACATTTTACTTAAACAGCATGCCCGCAAGCAGGA...GGGGTTTACTAATGAAAACATCACTTCAGTCTCTGGAACATATTTAACTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR GCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAACCAGCATTTTCATTTaGTTTTCTACGCCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLITSIFI*FSTPSV
Trigger: AACACTGGGCGTAGAAAAGCAAATGAAAATGCTGGT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATTGCTGAAAGAGCATTaGTTTTCTCTACTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLLKEH*FSLLAV
Trigger: AACAGCTAGTAGAGAAAAGCAATGCTCTTTCAGCAA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTTGCTGAAAGAGCATTaGTTTTCTCTACTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLLKEH*FSLLAV
Trigger: AACAGCTAGTAGAGAAAAGCAATGCTCTTTCAGCAA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAATTGTTTCTCAAGACTaGAGCATTTTAAACGCTGCT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLIVSQD*SILNAA
Trigger: AGCAGCGTTTAAAATGCTGCAGTCTTGAGAAACAAT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTATTTGTACTGCTTGGTaGCATAGGCAATATCCTTTA +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTICTAW*HRQYPL
Trigger: TAAAGGATATTGCCTATGGCACCAAGCAGTACAAAT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTTGTACTGCTTGGTaGCATAGGCAATATCCTTTA +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQICTAW*HRQYPL
Trigger: TAAAGGATATTGCCTATGGCACCAAGCAGTACAAAT...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTGTTCCAATCAAACTTaGTGTACAAAATATTCGGCC +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTCSNQT*CTKYSA
Trigger: GGCCGAATATTTTGTACAGCAAGTTTGATTGGAACA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTACCAGTATTCCACTGTaGCAAAATTTGGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFTSIPL*QNLGCL
Trigger: GAGACATCCCAAATTTTGGCACAGTGGAATACTGGT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCTTAACGACTGCATATaGTCTGGCCCCTTAAAATTT +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHLNDCI*SGPLKF
Trigger: AAATTTTAAGGGGCCAGAGCATATGCAGTCGTTAAG...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATACCACGTAGATCACATTaGTATAGTTATAGTAGACCC +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIPRRSH*YSYSRP
Trigger: GGGTCTACTATAACTATAGCAATGTGATCTACGTGG...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTTCACCATCTGCTCGTaGATCAAAAACATCGATATT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTFTICS*IKNIDI
Trigger: AATATCGATGTTTTTGATGCACGAGCAGATGGTGAA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAACTTTCAGAGCTaGTTTTCGAGGATCTGGTTA +
Preference number: 4 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQINFQS*FSRIWL
Trigger: TAACCAGATCCTCGAAAAGCAGCTCTGAAAGTTAAT...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAATTAACTTTCAGAGCTaGTTTTCGAGGATCTGGTTA +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAINFQS*FSRIWL
Trigger: TAACCAGATCCTCGAAAAGCAGCTCTGAAAGTTAAT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAATTAACTTTCAGAGCTaGTTTTCGAGGATCTGGTTA +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKINFQS*FSRIWL
Trigger: TAACCAGATCCTCGAAAAGCAGCTCTGAAAGTTAAT...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGCTGTTTTAAATTACTaGAGGGAATATTATGGGCCT +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLAVLNY*REYYGP
Trigger: AGGCCCATAATATTCCCTGCAGTAATTTAAAACAGC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCATTGTACATTATTGTATaGAGTTTGCCTGTAACCCTG +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYALYIIV*SLPVTL
Trigger: CAGGGTTACAGGCAAACTCCATACAATAATGTACAA...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATTGTACATTATTGTATaGAGTTTGCCTGTAACCCTG +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLYIIV*SLPVTL
Trigger: CAGGGTTACAGGCAAACTCCATACAATAATGTACAA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAATTGTACATTATTGTATaGAGTTTGCCTGTAACCCTG +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKLYIIV*SLPVTL
Trigger: CAGGGTTACAGGCAAACTCCATACAATAATGTACAA...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGTAAACATGGGATGTaGAGTTTCTGCTACATCTGC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYCKHGM*SFCYIC
Trigger: GCAGATGTAGCAGAAACTCCACATCCCATGTTTACA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTCACTGTGCCAAAATTTaGGATGTCTCCTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFHCAKI*DVSFCS
Trigger: GGAACAAAAGGAGACATCCCAAATTTTGGCACAGTG...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCACTGTGCCAAAATTTaGGATGTCTCCTTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYHCAKI*DVSFCS
Trigger: GGAACAAAAGGAGACATCCCAAATTTTGGCACAGTG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTATGATCATCAAACTGTaGATCATTGCTACTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTMIIKL*IIATGN
Trigger: ATTCCCAGTAGCAATGATCCACAGTTTGATGATCAT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGATGATCATCAAACTGTaGATCATTGCTACTGGGAAT +
Preference number: 4 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRMIIKL*IIATGN
Trigger: ATTCCCAGTAGCAATGATCCACAGTTTGATGATCAT...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATAACATCACTCTGATGTaGCATGATATCCACGAAAGA +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHNITLM*HDIHER
Trigger: TCTTTCGTGGATATCATGCCACATCAGAGTGATGTT...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262135.9
CDS-3UTR CCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAGTCCTCTTCAACTTCTaGTTCCAAGTCCTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGVLFNF*FQVLCY
Trigger: ATAACAGAGGACTTGGAACCAGAAGTTGAAGAGGAC...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCTTGGAGATAGGACCTaGAATAATACAGTCATCACT +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHLGDRT*NNTVIT
Trigger: AGTGATGACTGTATTATTCCAGGTCCTATCTCCAAG...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACCATTAGAGCACAGATaGTTCAAACTATATGCAGAT +
Preference number: 4 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAPLEHR*FKLYAD
Trigger: ATCTGCATATAGTTTGAACCATCTGTGCTCTAATGG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATAGAATACCAGTAATATaGGTCCAATTTTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHRIPVI*VQFSRR
Trigger: CCGCCTGGAAAATTGGACCCATATTACTGGTATTCT...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAAGAATACCAGTAATATaGGTCCAATTTTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGRIPVI*VQFSRR
Trigger: CCGCCTGGAAAATTGGACCCATATTACTGGTATTCT...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR TCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATTGCTGTTCTCGAAGCTaGAGAAGAGATAACTCAATT +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHCCSRS*RRDNSI
Trigger: AATTGAGTTATCTCTTCTTCAGCTTCGAGAACAGCA...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATCGAATATTTGACCTTTaGTCTGTAGCTTGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHRIFDL*SVACCS
Trigger: AGAACAGCAAGCTACAGATCAAAGGTCAAATATTCG...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCATACTGTTCCACTTTaGGTTCATAATCTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYHTVPL*VHNLAA
Trigger: TGCAGCAAGATTATGAACTCAAAGTGGAACAGTATG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAGCTCCCAGCTTCCCATaGATTATAGATTATATACAC +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGAPSFP*IIDYIH
Trigger: GTGTATATAATCTATAATTCATGGGAAGCTGGGAGC...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATTCTGATAGTTGGGGATaGATTATCATCCTGATATTG +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHSDSWG*IIILIL
Trigger: CAATATCAGGATGATAATTCATCCCCAACTATCAGA...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR GCA 90 bp AGCAAAGTTAAATATGTTCCAGAGACTGAAGTGATGTTTTCATTAGTAAACCCCTTAATTTTATCCTCCTaGTTGCGGGCATGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SKVKYVPETEVMFSLVNPLILSS*LRACCL
Trigger: TAAACAGCATGCCCGCAAGCAGGAGGATAAAATTAA...GGGGTTTACTAATGAAAACATCACTTCAGTCTCTGGAACATATTTAACTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTTAATTTTATCCTCCTaGTTGCGGGCATGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYLILSS*LRACCL
Trigger: TAAACAGCATGCCCGCAAGCAGGAGGATAAAATTAA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACACCAGCATTTTCATTTaGTTTTCTACGCCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYTSIFI*FSTPSV
Trigger: AACACTGGGCGTAGAAAAGCAAATGAAAATGCTGGT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAACAGCATTTTAAACGCTaGTCTTTAAGTTGCATGTTT +
Preference number: 4 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKQHFKR*SLSCMF
Trigger: AAACATGCAACTTAAAGAGCAGCGTTTAAAATGCTG...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATGTTCCAATCAAACTTaGTGTACAAAATATTCGGCC +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLICSNQT*CTKYSA
Trigger: GGCCGAATATTTTGTACAGCAAGTTTGATTGGAACA...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATCGATAAAGTCGAATTaGTTGATCCATGGGAACTCT +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGSIKSN*LIHGNS
Trigger: AGAGTTCCCATGGATCAAGCAATTCGACTTTATCGA...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTCTTAACGACTGCATATaGTCTGGCCCCTTAAAATTT +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFLNDCI*SGPLKF
Trigger: AAATTTTAAGGGGCCAGAGCATATGCAGTCGTTAAG...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCCACGTAGATCACATTaGTATAGTTATAGTAGACCC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYPRRSH*YSYSRP
Trigger: GGGTCTACTATAACTATAGCAATGTGATCTACGTGG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACAAAACATCGATATTTTaGTCAATGAGGTCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYKTSIF*SMRSLP
Trigger: AGGGAGGGACCTCATTGAGCAAAATATCGATGTTTT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACAATACCTTCACCATCTaGTCGTGCATCAAAAACATC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYNTFTI*SCIKNI
Trigger: GATGTTTTTGATGCACGAGCAGATGGTGAAGGTATT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAGCTGTTTTAAATTACTaGAGGGAATATTATGGGCCT +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIAVLNY*REYYGP
Trigger: AGGCCCATAATATTCCCTGCAGTAATTTAAAACAGC...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTCTATTTCTGGTATATaGTCTACCTCTGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTSISGI*STSGEI
Trigger: AATTTCACCAGAGGTAGAGCATATACCAGAAATAGA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTTTGAAGTTGCTGTTTaGCTGAAATCAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTFEVAV*LKSVCF
Trigger: AAAACAGACTGATTTCAGCCAAACAGCAACTTCAAA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATTTGTACATTATTGTATaGAGTTTGCCTGTAACCCTG +
Preference number: 4 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHLYIIV*SLPVTL
Trigger: CAGGGTTACAGGCAAACTCCATACAATAATGTACAA...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACTCGTTCTAAGTGGATaGTTTCATCAAATTCATCAA +
Preference number: 4 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLVLSG*FHQIHQ
Trigger: TTGATGAATTTGATGAAACCATCCACTTAGAACGAG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCTTGGAGATAGGACCTaGAATAATACAGTCATCACT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYLGDRT*NNTVIT
Trigger: AGTGATGACTGTATTATTCCAGGTCCTATCTCCAAG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATGAAGATTTGCAGAGTTaGATGAGAGCAAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHEDLQS*MRARFF
Trigger: GAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTC...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACGAAGATTTGCAGAGTTaGATGAGAGCAAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYEDLQS*MRARFF
Trigger: GAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTC...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAAATGTGACAGAAACATaGCTGTTTCTCTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: SVVRSYSTGPTMYINKLINVTET*LFLSSC
Trigger: ACAAGATGAGAGAAACAGCCATGTTTCTGTCACATT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGACTGATATCAAGAAGATaGACATACTGTTCCACTTTG +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGLISRR*TYCSTL
Trigger: CAAAGTGGAACAGTATGTTCATCTTCTTGATATCAG...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTCATCCATGGTTACTTaGGAATCATTAAGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYSSMVT*ESLRLR
Trigger: TCTAAGCCTTAATGATTCTCAAGTAACCATGGATGA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTTCATCCATGGTTACTTaGGAATCATTAAGGCTTAGA +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFSSMVT*ESLRLR
Trigger: TCTAAGCCTTAATGATTCTCAAGTAACCATGGATGA...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR TCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTTCTCTCATCTTGTCTaGGATATACATTCCATACAG +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYFSHLV*DIHSIQ
Trigger: CTGTATGGAATGTATATCTCAGACAAGATGAGAGAA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTTTGCTGAAAGAGCATTaGTTTTCTCTACTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFLLKEH*FSLLAV
Trigger: AACAGCTAGTAGAGAAAAGCAATGCTCTTTCAGCAA...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAATTTGTACTGCTTGGTaGCATAGGCAATATCCTTTA +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGICTAW*HRQYPL
Trigger: TAAAGGATATTGCCTATGGCACCAAGCAGTACAAAT...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATATTTGTACTGCTTGGTaGCATAGGCAATATCCTTTA +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHICTAW*HRQYPL
Trigger: TAAAGGATATTGCCTATGGCACCAAGCAGTACAAAT...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGTTCCAATCAAACTTaGTGTACAAAATATTCGGCC +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYCSNQT*CTKYSA
Trigger: GGCCGAATATTTTGTACAGCAAGTTTGATTGGAACA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTTCACCATCTGCTCGTaGATCAAAAACATCGATATT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYFTICS*IKNIDI
Trigger: AATATCGATGTTTTTGATGCACGAGCAGATGGTGAA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATGCTGTTTTAAATTACTaGAGGGAATATTATGGGCCT +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHAVLNY*REYYGP
Trigger: AGGCCCATAATATTCCCTGCAGTAATTTAAAACAGC...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTTTGTACATTATTGTATaGAGTTTGCCTGTAACCCTG +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFLYIIV*SLPVTL
Trigger: CAGGGTTACAGGCAAACTCCATACAATAATGTACAA...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACATGATCATCAAACTGTaGATCATTGCTACTGGGAAT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYMIIKL*IIATGN
Trigger: ATTCCCAGTAGCAATGATCCACAGTTTGATGATCAT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTATGATCATCAAACTGTaGATCATTGCTACTGGGAAT +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFMIIKL*IIATGN
Trigger: ATTCCCAGTAGCAATGATCCACAGTTTGATGATCAT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTCCATTAGAGCACAGATaGTTCAAACTATATGCAGAT +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFPLEHR*FKLYAD
Trigger: ATCTGCATATAGTTTGAACCATCTGTGCTCTAATGG...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATAACCTTGGGAACATGTaGAACAGTCAGCATATTAAT +
Preference number: 4 (lower is better)
Translates to: YSTGPTMYINKLILYGCHNLGNM*NSQHIN
Trigger: ATTAATATGCTGACTGTTCCACATGTTCCCAAGGTT...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
3UTR CAA 72 bp ACTGTAATGAATTGTCTCATAATCTATTCCATCTTCTaGCCATTAGCAGGCTTTGAATGTTCACAAATAGGA +
Preference number: 4 (lower is better)
Translates to: TVMNCLIIYSIF*PLAGFECSQIG
Trigger: TCCTATTTGTGAACATTCAAAGCCTGCTAATGGCAAGAAGATGGAATAGATTATGAGACAATTCATTACAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR GCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCAGCATTTTAAACGCTaGTCTTTAAGTTGCATGTTT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYQHFKR*SLSCMF
Trigger: AAACATGCAACTTAAAGAGCAGCGTTTAAAATGCTG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATTTGAAGTTGCTGTTTaGCTGAAATCAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RSYSTGPTMYINKLILYGFEVAV*LKSVCF
Trigger: AAAACAGACTGATTTCAGCCAAACAGCAACTTCAAA...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTTTGAAGTTGCTGTTTaGCTGAAATCAGTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYFEVAV*LKSVCF
Trigger: AAAACAGACTGATTTCAGCCAAACAGCAACTTCAAA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CCA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTAACATGTGTAAGAACTaGTTTTCATTTTCACAGCTC +
Preference number: 4 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFNMCKN*FSFSQL
Trigger: GAGCTGTGAAAATGAAAACCAGTTCTTACACATGTT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS CCA 90 bp CCACTGGCCCTGCAGCTAGCTACCGTTGCTATAGCGCCGACAGCGTaGCGGGCGGCTGGCCGAGAGGAGCACGGGAGAAACATGGCAGGC +
Preference number: 5 (lower is better)
Translates to: PLALQLATVAIAPTA*RAAGREEHGRNMAG
Trigger: GCCTGCCATGTTTCTCCCGTGCTCCTCTCGGCCAGCCGCCCGCCACGCTGTCGGCGCTATAGCAACGGTAGCTAGCTGCAGGGCCAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CAA 90 bp GCCAATGTCCTCACACTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACTGTCTTTTCCAGCTCTaGCACCGTTTCTGCATGAGT +
Preference number: 5 (lower is better)
Translates to: ANVLTLQVLLVLWRVTDHCLFQL*HRFCMS
Trigger: ACTCATGCAGAAACGGTGCAAGAGCTGGAAAAGACA...GTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGAGGACATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACGTGGCTGCAGGTGGCTaGCTCGGGACTGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNVAAGG*LGTAGG
Trigger: ACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCAC...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCACTCAACAAACAGCCGTaGGATAGTGTCATCCATGGT +
Preference number: 5 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSLNKQP*DSVIHG
Trigger: ACCATGGATGACACTATCCAACGGCTGTTTGTTGAG...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTGCCCACTCTTGGGTTTaGGAAGTGACACGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAAHSWV*EVTRVS
Trigger: AGACACCCGTGTCACTTCCAAAACCCAAGAGTGGGC...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCACCTTCTTGTGAAACCTaGGGAACATGTGGAACAGTC +
Preference number: 5 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSPSCET*GTCGTV
Trigger: GACTGTTCCACATGTTCCCAAGGTTTCACAAGAAGG...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCATTAATTCATCCCCATTaGCCATCAAAGCATCGTGGC +
Preference number: 5 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSLIHPH*PSKHRG
Trigger: GCCACGATGCTTTGATGGCAAATGGGGATGAATTAA...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGCCCACTCTTGGGTTTaGGAAGTGACACGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLAHSWV*EVTRVS
Trigger: AGACACCCGTGTCACTTCCAAAACCCAAGAGTGGGC...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCACAAGTCATCTCTGTATaGCTTGTAGACAGACTGGAG +
Preference number: 5 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSQVISV*LVDRLE
Trigger: CTCCAGTCTGTCTACAAGCAATACAGAGATGACTTG...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTGCTACATCTGCATCTaGGAATTTTATACCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LQVLLVLWRVTDHGEAKACYICI*EFYTFP
Trigger: AGGAAAGGTATAAAATTCCAAGATGCAGATGTAGCA...AGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCGCCCACTCTTGGGTTTaGGAAGTGACACGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAAHSWV*EVTRVS
Trigger: AGACACCCGTGTCACTTCCAAAACCCAAGAGTGGGC...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TACTGCACCCCAGCCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGACAACAAACATGTGGTaGTTTACTAGGACTGGAGAG +
Preference number: 5 (lower is better)
Translates to: YCTPARETMRDSGNASSLTTNMW*FTRTGE
Trigger: CTCTCCAGTCCTAGTAAACAACCACATGTTTGTTGT...CAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGGCTGGGGTGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCATCTCTCCTGGTTGTTTaGTCCTACACAAAGATGACA +
Preference number: 5 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSSLLVV*SYTKMT
Trigger: TGTCATCTTTGTGTAGGACAAAACAACCAGGAGAGA...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCATCTAAGAGTACCAGATaGCACTTCCAAAAGCCTGAA +
Preference number: 5 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSSKSTR*HFQKPE
Trigger: TTCAGGCTTTTGGAAGTGCAATCTGGTACTCTTAGA...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTCCTGGCGAGACTTCATaGTCCGTGTTGTTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAPGETS*SVLLKF
Trigger: AAACTTCAACAACACGGACAATGAAGTCTCGCCAGG...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGTCTTTTCCAGCTCTaGCACCGTTTCTGCATGAGT +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLACLFQL*HRFCMS
Trigger: ACTCATGCAGAAACGGTGCAAGAGCTGGAAAAGACA...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTTCAGAGAACCTACGGGACTGCAGGTGGTaGCAACATCTTATTGTAATG +
Preference number: 5 (lower is better)
Translates to: PGRQCETLGMPAHCSENLRDCRW*QHLIVM
Trigger: CATTACAATAAGATGTTGCAACCACCTGCAGTCCCG...TAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp GCCAATGTCCTCACACTCCAGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACTTGTTATTGATCCACTaGGTGGAAGGTAAGCAAATT +
Preference number: 5 (lower is better)
Translates to: ANVLTLQVLLVLWRVTDHLLLIH*VEGKQI
Trigger: AATTTGCTTACCTTCCACCAAGTGGATCAATAACAA...GTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCTGGAGTGTGAGGACATTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCCTGCAGTCTCATCAGTaGGACCAGACATGGCCTAGC +
Preference number: 5 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFLQSHQ*DQTWPS
Trigger: GCTAGGCCATGTCTGGTCCAACTGATGAGACTGCAG...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAAGAGGGCCACACCTGCAGTCTCATCAGTaGGACCAGACATGGCCTAGC +
Preference number: 5 (lower is better)
Translates to: NDISLGNLARYHSPRGPHLQSHQ*DQTWPS
Trigger: GCTAGGCCATGTCTGGTCCAACTGATGAGACTGCAG...GTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp TTTGGCCAGGTATCACAGTCCAAGAGGGCCACACACTCTACCTGGCCCTTTAATCCTGGCGAGACTTCATaGTCCGTGTTGTTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: FGQVSQSKRATHSTWPFNPGETS*SVLLKF
Trigger: AAACTTCAACAACACGGACAATGAAGTCTCGCCAGG...ATTAAAGGGCCAGGTAGAGTGTGTGGCCCTCTTGGACTGTGATACCTGGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp TGGCCCTTTAATGAGTTTAGGGTCCTAAGCCCCACCCAATGGCCTGTGCACAAACCTGGCGAGACTTCATaGTCCGTGTTGTTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: WPFNEFRVLSPTQWPVHKPGETS*SVLLKF
Trigger: AAACTTCAACAACACGGACAATGAAGTCTCGCCAGG...TTTGTGCACAGGCCATTGGGTGGGGCTTAGGACCCTAAACTCATTAAAGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp CACTGCTGGTGGCCCCTGACGCCAAGCCCTCTTCAATGGATCCAGTTTGGCTCATCAAGGATTTCAGTTTaGTCTGTTAAGTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: HCWWPLTPSPLQWIQFGSSRISV*SVKSDF
Trigger: GAAGTCTGACTTAACAGACAAAACTGAAATCCTTGA...TGAGCCAAACTGGATCCATTGAAGAGGGCTTGGCGTCAGGGGCCACCAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCTTCTGCATGAGTTGCTaGCAGCTCTCTCATAGAGCG +
Preference number: 5 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAFCMSC*QLSHRA
Trigger: CGCTCTATGAGAGAGCTGCAAGCAACTCATGCAGAA...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTGTCTTTTCCAGCTCTaGCACCGTTTCTGCATGAGT +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLCLFQL*HRFCMS
Trigger: ACTCATGCAGAAACGGTGCAAGAGCTGGAAAAGACA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGTGGCTGCAGGTGGCTaGCTCGGGACTGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLVAAGG*LGTAGG
Trigger: ACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCAC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGGTGGCTGCAGGTGGCTaGCTCGGGACTGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRVAAGG*LGTAGG
Trigger: ACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCAC...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAGTGGCTGCAGGTGGCTaGCTCGGGACTGCAGGTGGT +
Preference number: 5 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQVAAGG*LGTAGG
Trigger: ACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCAC...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTACACATCATCTTTTCCTaGCTGCATTTTCTCAGTATT +
Preference number: 5 (lower is better)
Translates to: RSCSSSGGSLTTVKRRLLHIIFS*LHFLSI
Trigger: AATACTGAGAAAATGCAGCAAGGAAAAGATGATGTG...TAGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTAGAAGATGCCAAGCTTaGTTCTGCAAGCTGACCTTC +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLRRCQA*FCKLTF
Trigger: GAAGGTCAGCTTGCAGAACAAAGCTTGGCATCTTCT...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCACCCACTGCCCACTCTaGGGTTTTGGAAGTGACACG +
Preference number: 5 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFTHCPL*GFGSDT
Trigger: CGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGGT...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGGTCCTGCTCGTCCTCTGGAGGGTCACTGACCACGGTGAAGCGAAGGCTTCTAAATTCCTTTGCAGCATaGATTCACAGCTCCATTAAA +
Preference number: 5 (lower is better)
Translates to: RSCSSSGGSLTTVKRRLLNSFAA*IHSSIK
Trigger: TTTAATGGAGCTGTGAATCAATGCTGCAAAGGAATT...TAGAAGCCTTCGCTTCACCGTGGTCAGTGACCCTCCAGAGGACGAGCAGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTTAGTCTGCAGATGTTaGTGGTCTCCAGAAGGTTCC +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLLVCRC*WSPEGS
Trigger: GGAACCTTCTGGAGACCACAAACATCTGCAGACTAA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 90 bp TCTCATCATGCAAACGCAAAAATCTGTCTTCCAGTTCCTCACGACTaGCACGTGACACTGCCTGGCGAGACTTCATTGTCCGTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SHHANAKICLPVPHD*HVTLPGETSLSVLL
Trigger: CAACAACACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGTCAGTCGTGAGGAACTGGAAGACAGATTTTTGCGTTTGCATGATGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000262135.9
ENST00000562230.5
ENST00000562588.5
ENST00000563746.5
ENST00000564374.5
ENST00000566096.5
ENST00000568653.7
ENST00000621565.5
ENST00000647211.2
ENST00000679110.1
ENST00000680193.1
ENST00000680907.1
CDS TCA 90 bp CAAACTGAGCAACACTTTCACCCATACCATCGATATTTTGCTCAATaGGGTCCCTCCCTTCCTGAAACATGTCGGCAAGGTCGACGTGAG +
Preference number: 5 (lower is better)
Translates to: QTEQHFHPYHRYFAQ*GPSLPETCRQGRRE
Trigger: CTCACGTCGACCTTGCCGACATGTTTCAGGAAGGGAGGGACCTCATTGAGCAAAATATCGATGGTATGGGTGAAAGTGTTGCTCAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564374.5
CDS-3UTR CAA 90 bp CCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATTGTTCAGAGAACCTATTGGGATGTCTCCTTTaGTTCCAATCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: PGRQCETLGMPAHCSENLLGCLL*FQSNLL
Trigger: CAGCAAGTTTGATTGGAACAAAAGGAGACATCCCAA...TAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTATCTGTAGAACTGAGTaGAGCAGTTTTGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLICRTE*SSFGCL
Trigger: CAAGCACCCAAAACTGCTCAACTCAGTTCTACAGAT...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCGGGAATGCCAGCTCATaGTTCAGAGAACCTAGTTTC +
Preference number: 5 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAGNASS*FREPSF
Trigger: GAAACTAGGTTCTCTGAACAATGAGCTGGCATTCCC...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAACTGCAGTCTCATCAGTaGGACCAGACATGGCCTAGC +
Preference number: 5 (lower is better)
Translates to: FHLMILRSQCNLVLLPAELQSHQ*DQTWPS
Trigger: GCTAGGCCATGTCTGGTCCAACTGATGAGACTGCAG...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTACTTCATTGTCCGTGTaGTTGAAGTTTCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLATSLSV*LKFLVT
Trigger: GGTTACAAGAAACTTCAACAACACGGACAATGAAGT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTCTCATGAACTTTCTCTaGCAGCTGCTCAATCATTTC +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLLMNFL*QLLNHF
Trigger: GAAATGATTGAGCAGCTGCAAGAGAAAGTTCATGAG...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTACCTTTGATCTGTAGCTaGCTGTTCTCGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVPLICS*LFSKLK
Trigger: CTTCAGCTTCGAGAACAGCAAGCTACAGATCAAAGG...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTTCTGCATGAGTTGCTaGCAGCTCTCTCATAGAGCG +
Preference number: 5 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFFCMSC*QLSHRA
Trigger: CGCTCTATGAGAGAGCTGCAAGCAACTCATGCAGAA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCCTCGCACTACGGGAGTaGTCTGTAGTTCAAAATCAT +
Preference number: 5 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKALALRE*SVVQNH
Trigger: ATGATTTTGAACTACAGACAACTCCCGTAGTGCGAG...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTTGGGATGTCTCCTTTaGTTCCAATCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLLGCLL*FQSNLL
Trigger: CAGCAAGTTTGATTGGAACAAAAGGAGACATCCCAA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTCCAAGTCCATATTCATaGGCACTGGGAAATACATAT +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAPSPYS*ALGNTY
Trigger: ATATGTATTTCCCAGTGCCAATGAATATGGACTTGG...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTATCTATTCCATCTTCTaGCCATTAGCAGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAIYSIF*PLAGFE
Trigger: TTCAAAGCCTGCTAATGGCAAGAAGATGGAATAGAT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTAGTTGTTATGAAGATTaGCAGAGTTGGATGAGAGCA +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLASCYED*QSWMRA
Trigger: TGCTCTCATCCAACTCTGCAAATCTTCATAACAACT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATTAGTCTGCAGATGTTaGTGGTCTCCAGAAGGTTCC +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVLVCRC*WSPEGS
Trigger: GGAACCTTCTGGAGACCACAAACATCTGCAGACTAA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTCTAAGAGTACCAGATaGCACTTCCAAAAGCCTGAA +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLSKSTR*HFQKPE
Trigger: TTCAGGCTTTTGGAAGTGCAATCTGGTACTCTTAGA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp GGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGGCAAGGAGGTTAAATGGCTaGAACATACATACCACAGGC +
Preference number: 5 (lower is better)
Translates to: GSNTCLSTLWLLGLQHVARRLNG*NIHTTG
Trigger: GCCTGTGGTATGTATGTTCAAGCCATTTAACCTCCT...TGCCACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS GCA 90 bp TGCCTTGGCTTCCCAGAGTGTTGGGATTTCAGGTGTGAAGCACTGTaGCTGGTCTGTTTGATATTCTTGGAGATAGGACCTGGAATAATA +
Preference number: 5 (lower is better)
Translates to: CLGFPECWDFRCEAL*LVCLIFLEIGPGII
Trigger: TATTATTCCAGGTCCTATCTCCAAGAATATCAAACAGACCAGGCACAGTGCTTCACACCTGAAATCCCAACACTCTGGGAAGCCAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568009.1
CDS CCA 90 bp AAAAATCTGTCTTCCAGTTCCTCACGACTGACACGTGACACTGCCTaGCGAGACTTCATTGTCCGTGTTGTTGAAGTTTCTTGTAACCCT +
Preference number: 5 (lower is better)
Translates to: KNLSSSSSRLTRDTA*RDFIVRVVEVSCNP
Trigger: AGGGTTACAAGAAACTTCAACAACACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGTCAGTCGTGAGGAACTGGAAGACAGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000262135.9
ENST00000562230.5
ENST00000562588.5
ENST00000563746.5
ENST00000564374.5
ENST00000566096.5
ENST00000568653.7
ENST00000569716.1
ENST00000621565.5
ENST00000647211.2
ENST00000679110.1
ENST00000680193.1
ENST00000680907.1
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTACTAGCCGTATTAACTaGGTGGCCATTCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLATSRIN*VAILLI
Trigger: AATTAAAAGAATGGCCACCAAGTTAATACGGCTAGT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGCTACATCTGCATCTaGGAATTTTATACCTTTCCT +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLACYICI*EFYTFP
Trigger: AGGAAAGGTATAAAATTCCAAGATGCAGATGTAGCA...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATTAATTCATCCCCATTaGCCATCAAAGCATCGTGGC +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVLIHPH*PSKHRG
Trigger: GCCACGATGCTTTGATGGCAAATGGGGATGAATTAA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTAAGTTCATCAAGTTGTaGCTTTTGTTCCAGATACTG +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLAKFIKL*LLFQIL
Trigger: CAGTATCTGGAACAAAAGCAACAACTTGATGAACTT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACCGGGACTGCAGGTGGTaGCAACATCTTATTGTAATG +
Preference number: 5 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNRDCRW*QHLIVM
Trigger: CATTACAATAAGATGTTGCAACCACCTGCAGTCCCG...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCAGTCTTCAGTTGTTATaGATCCACTTGGTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKASLQLL*IHLVEG
Trigger: ACCTTCCACCAAGTGGATCAATAACAACTGAAGACT...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CCAAGTCATCTCTGTATTGCTTGTAGACAGACTGGAGGGCATGGAGAGCTTCGAAGTCTTCAGTTGTTATaGATCCACTTGGTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: PSHLCIACRQTGGHGELRSLQLL*IHLVEG
Trigger: ACCTTCCACCAAGTGGATCAATAACAACTGAAGACT...TCGAAGCTCTCCATGCCCTCCAGTCTGTCTACAAGCAATACAGAGATGACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTTTCCTAAGTCTTCAGTaGTTATTGATCCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLFLSLQ*LLIHLV
Trigger: CACCAAGTGGATCAATAACAACTGAAGACTTAGGAA...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACAGAAGATGCCAAGCTTaGTTCTGCAAGCTGACCTTC +
Preference number: 5 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNRRCQA*FCKLTF
Trigger: GAAGGTCAGCTTGCAGAACAAAGCTTGGCATCTTCT...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACCTCAACAAACAGCCGTaGGATAGTGTCATCCATGGT +
Preference number: 5 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNLNKQP*DSVIHG
Trigger: ACCATGGATGACACTATCCAACGGCTGTTTGTTGAG...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCCTCAACAAACAGCCGTaGGATAGTGTCATCCATGGT +
Preference number: 5 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFLNKQP*DSVIHG
Trigger: ACCATGGATGACACTATCCAACGGCTGTTTGTTGAG...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTAATTCCTTTGCAGCATaGATTCACAGCTCCATTAAA +
Preference number: 5 (lower is better)
Translates to: ELLFEDLVTQIHPGTVLANSFAA*IHSSIK
Trigger: TTTAATGGAGCTGTGAATCAATGCTGCAAAGGAATT...AGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAAGGAACATAGCCTGTTaGCAAACAGTGAAAACCCAC +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVRNIAC*QTVKTH
Trigger: GTGGGTTTTCACTGTTTGCAAACAGGCTATGTTCCT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTAGTTGTTATGAAGATTaGCAGAGTTGGATGAGAGCA +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLSCYED*QSWMRA
Trigger: TGCTCTCATCCAACTCTGCAAATCTTCATAACAACT...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS GCA 90 bp TCCTCCTGCTTGCGGGCATGCTGTTTAAGTAAAATGTTCTCATCATaGAAACGCAAAAATCTGTCTTCCAGTTCCTCACGACTGACACGT +
Preference number: 5 (lower is better)
Translates to: SSCLRACCLSKMFSS*KRKNLSSSSSRLTR
Trigger: ACGTGTCAGTCGTGAGGAACTGGAAGACAGATTTTTGCGTTTGCATGATGAGAACATTTTACTTAAACAGCATGCCCGCAAGCAGGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000262135.9
ENST00000562230.5
ENST00000562588.5
ENST00000563746.5
ENST00000564374.5
ENST00000566096.5
ENST00000568653.7
ENST00000621565.5
ENST00000647211.2
ENST00000679110.1
ENST00000680193.1
ENST00000680907.1
CDS CCA 90 bp ACTAAAACCCAACTCAAAGTAAAAGGCCTGCACATAGCATGCCAGTaGGTTGTTGAAGTCCACAGAGTAGAAACTGAACTGGAACCACCT +
Preference number: 5 (lower is better)
Translates to: TKTQLKVKGLHIACQ*VVEVHRVETELEPP
Trigger: AGGTGGTTCCAGTTCAGTTTCTACTCTGTGGACTTCAACAACCCACTGGCATGCTATGTGCAGGCCTTTTACTTTGAGTTGGGTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCTGCAGTCTCATCAGTaGGACCAGACATGGCCTAGC +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLQSHQ*DQTWPS
Trigger: GCTAGGCCATGTCTGGTCCAACTGATGAGACTGCAG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TGCGGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGACTTCATTGTCCGTGTaGTTGAAGTTTCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: CGSNTCLSTLWLLGLQHVTSLSV*LKFLVT
Trigger: GGTTACAAGAAACTTCAACAACACGGACAATGAAGT...CACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp AATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAAGAGGGCCACACATTTTATCCTCCTGCTaGCGGGCATGCTGTTTAAGT +
Preference number: 5 (lower is better)
Translates to: NDISLGNLARYHSPRGPHILSSC*RACCLS
Trigger: ACTTAAACAGCATGCCCGCAAGCAGGAGGATAAAAT...GTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp AGCTGCTTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTACTAGCCGTATTAACTaGGTGGCCATTCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: SCFSRIWLPRYTLALYWLTSRIN*VAILLI
Trigger: AATTAAAAGAATGGCCACCAAGTTAATACGGCTAGT...AAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTACTCATGAACTTTCTCTaGCAGCTGCTCAATCATTTC +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVLMNFL*QLLNHF
Trigger: GAAATGATTGAGCAGCTGCAAGAGAAAGTTCATGAG...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAATTATTGTATGGAGTTaGCCTGTAACCCTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVIIVWS*PVTLGL
Trigger: CAAACCCAGGGTTACAGGCAAACTCCATACAATAAT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTTAATTCATCCCCATTaGCCATCAAAGCATCGTGGC +
Preference number: 5 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFLIHPH*PSKHRG
Trigger: GCCACGATGCTTTGATGGCAAATGGGGATGAATTAA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCATTAATTCATCCCCATTaGCCATCAAAGCATCGTGGC +
Preference number: 5 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSLIHPH*PSKHRG
Trigger: GCCACGATGCTTTGATGGCAAATGGGGATGAATTAA...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCATGTCTTTTCCAGCTCTaGCACCGTTTCTGCATGAGT +
Preference number: 5 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPCLFQL*HRFCMS
Trigger: ACTCATGCAGAAACGGTGCAAGAGCTGGAAAAGACA...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACCTCGATAAAGTCGAATaGCTTGATCCATGGGAACTC +
Preference number: 5 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNLDKVE*LDPWEL
Trigger: GAGTTCCCATGGATCAAGCAATTCGACTTTATCGAG...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCACTCGATAAAGTCGAATaGCTTGATCCATGGGAACTC +
Preference number: 5 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSLDKVE*LDPWEL
Trigger: GAGTTCCCATGGATCAAGCAATTCGACTTTATCGAG...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGCCCACTCTTGGGTTTaGGAAGTGACACGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLAHSWV*EVTRVS
Trigger: AGACACCCGTGTCACTTCCAAAACCCAAGAGTGGGC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGACCCACTGCCCACTCTaGGGTTTTGGAAGTGACACG +
Preference number: 5 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRTHCPL*GFGSDT
Trigger: CGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGGT...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAACCCACTGCCCACTCTaGGGTTTTGGAAGTGACACG +
Preference number: 5 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKTHCPL*GFGSDT
Trigger: CGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGGT...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCACAAGTCATCTCTGTATaGCTTGTAGACAGACTGGAG +
Preference number: 5 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSQVISV*LVDRLE
Trigger: CTCCAGTCTGTCTACAAGCAATACAGAGATGACTTG...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAATGCCTCTGGAGCATTaGCTTTCAAGCCTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAMPLEH*LSSLQV
Trigger: GACTTGGAGGCTTGAAAGCAAATGCTCCAGAGGCAT...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACAGGAACATAGCCTGTTaGCAAACAGTGAAAACCCAC +
Preference number: 5 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNRNIAC*QTVKTH
Trigger: GTGGGTTTTCACTGTTTGCAAACAGGCTATGTTCCT...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAAGACGAGAGTCATTATaGAAGCCATTAGAGCACAGA +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVRRESL*KPLEHR
Trigger: TCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAAGTGTATGTTCACACCAGCAACACCTTAAGCTGGTATCTGTGTGGCAAGGCCGCTGTTTCTCTCATCTaGTCTGAGATATACATTCCA +
Preference number: 5 (lower is better)
Translates to: EVYVHTSNTLSWYLCGKAAVSLI*SEIYIP
Trigger: TGGAATGTATATCTCAGACAAGATGAGAGAAACAGC...GGCCTTGCCACACAGATACCAGCTTAAGGTGTTGCTGGTGTGAACATACACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 90 bp GGTGCTAAAACTAGTGTGCTAACAGAGGATGCTGGAGGAAGTCTTTaGACAACTTCTGGCTCTTCGCTGCGAATGAAATTTCCTAAGTCT +
Preference number: 5 (lower is better)
Translates to: GAKTSVLTEDAGGSL*TTSGSSLRMKFPKS
Trigger: AGACTTAGGAAATTTCATTCGCAGCGAAGAGCCAGAAGTTGTTCAAAGACTTCCTCCAGCATCCTCTGTTAGCACACTAGTTTTAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000681587.1
CDS-3UTR CAA 90 bp AATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAAGAGGGCCACACTCATTGTCCGTGTTGTaGAAGTTTCTTGTAACCCTC +
Preference number: 5 (lower is better)
Translates to: NDISLGNLARYHSPRGPHSLSVL*KFLVTL
Trigger: GAGGGTTACAAGAAACTTCAACAACACGGACAATGA...GTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAATTTTATCCTCCTGCTaGCGGGCATGCTGTTTAAGT +
Preference number: 5 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSILSSC*RACCLS
Trigger: ACTTAAACAGCATGCCCGCAAGCAGGAGGATAAAAT...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAACCTTTGATCTGTAGCTaGCTGTTCTCGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEPLICS*LFSKLK
Trigger: CTTCAGCTTCGAGAACAGCAAGCTACAGATCAAAGG...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATGCCCACTCTTGGGTTTaGGAAGTGACACGGGTGTCT +
Preference number: 5 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHAHSWV*EVTRVS
Trigger: AGACACCCGTGTCACTTCCAAAACCCAAGAGTGGGC...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCACAAGTCATCTCTGTATaGCTTGTAGACAGACTGGAG +
Preference number: 5 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPQVISV*LVDRLE
Trigger: CTCCAGTCTGTCTACAAGCAATACAGAGATGACTTG...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAAGGAACATAGCCTGTTaGCAAACAGTGAAAACCCAC +
Preference number: 5 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSRNIAC*QTVKTH
Trigger: GTGGGTTTTCACTGTTTGCAAACAGGCTATGTTCCT...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAATCTATTCCATCTTCTaGCCATTAGCAGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVIYSIF*PLAGFE
Trigger: TTCAAAGCCTGCTAATGGCAAGAAGATGGAATAGAT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCACAACAAACATGTGGTaGTTTACTAGGACTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFTTNMW*FTRTGE
Trigger: CTCTCCAGTCCTAGTAAACAACCACATGTTTGTTGT...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAGCTGTTTCTCTCATCTaGTCTGAGATATACATTCCA +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVAVSLI*SEIYIP
Trigger: TGGAATGTATATCTCAGACAAGATGAGAGAAACAGC...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTAAAATCTCTCTCCTGGTaGTTTTGTCCTACACAAAGA +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVKSLSW*FCPTQR
Trigger: TCTTTGTGTAGGACAAAACAACCAGGAGAGAGATTT...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp GGTAGTAATACATGTCTATCCACACTCTGGCTACTCGGCCTACAGCATGTGGCAAAACCTTTAATAGCTTaGGGATGTCATAGAACAACC +
Preference number: 5 (lower is better)
Translates to: GSNTCLSTLWLLGLQHVAKPLIA*GCHRTT
Trigger: GGTTGTTCTATGACATCCCAAAGCTATTAAAGGTTT...TGCCACATGCTGTAGGCCGAGTAGCCAGAGTGTGGATAGACATGTATTACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568653.7
CDS TCA 90 bp ATTTCAGTTTTGTCTGTTAAGTCAGACTTCAAGGCAGTCTCGAGCTaGGCAATCTGCACTTTCAGCTGTTGCTCCTTTAACTTCCATTGC +
Preference number: 5 (lower is better)
Translates to: ISVLSVKSDFKAVSS*AICTFSCCSFNFHC
Trigger: GCAATGGAAGTTAAAGGAGCAACAGCTGAAAGTGCAGATTGCTCAGCTCGAGACTGCCTTGAAGTCTGACTTAACAGACAAAACTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000680907.1
CDS GCA 90 bp ATCATGACTAAAACCCAACTCAAAGTAAAAGGCCTGCACATAGCATaGCAGTGGGTTGTTGAAGTCCACAGAGTAGAAACTGAACTGGAA +
Preference number: 5 (lower is better)
Translates to: IMTKTQLKVKGLHIA*QWVVEVHRVETELE
Trigger: TTCCAGTTCAGTTTCTACTCTGTGGACTTCAACAACCCACTGGCATGCTATGTGCAGGCCTTTTACTTTGAGTTGGGTTTTAGTCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS CCA 90 bp CCAAAGCCTTTGCCCTTTCTCGATAAAGTCGAATTGCTTGATCCATaGGAACTCTTAATCGGAACCAGTATTCCACTGTGCCAAAATTTG +
Preference number: 5 (lower is better)
Translates to: PKPLPFLDKVELLDP*ELLIGTSIPLCQNL
Trigger: CAAATTTTGGCACAGTGGAATACTGGTTCCGATTAAGAGTTCCCATGGATCAAGCAATTCGACTTTATCGAGAAAGGGCAAAGGCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGCAAAGTTAAATATGTTCCAGAGACTGAAGTGATGTTTTCATTAGTAAACCCCCTGCAGTCTCATCAGTaGGACCAGACATGGCCTAGC +
Preference number: 5 (lower is better)
Translates to: SKVKYVPETEVMFSLVNPLQSHQ*DQTWPS
Trigger: GCTAGGCCATGTCTGGTCCAACTGATGAGACTGCAG...GGGGTTTACTAATGAAAACATCACTTCAGTCTCTGGAACATATTTAACTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CAA 90 bp AATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCAAGAGGGCCACACACTTCATTGTCCGTGTaGTTGAAGTTTCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: NDISLGNLARYHSPRGPHTSLSV*LKFLVT
Trigger: GGTTACAAGAAACTTCAACAACACGGACAATGAAGT...GTGTGGCCCTCTTGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp TTTTCGAGGATCTGGTTACCCAGATACACCCTGGCACTGTACTGGCTTGATGTATGCTACATCTGCATCTaGGAATTTTATACCTTTCCT +
Preference number: 5 (lower is better)
Translates to: FSRIWLPRYTLALYWLDVCYICI*EFYTFP
Trigger: AGGAAAGGTATAAAATTCCAAGATGCAGATGTAGCA...TACATCAAGCCAGTACAGTGCCAGGGTGTATCTGGGTAACCAGATCCTCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAATTCTGCATGAGTTGCTaGCAGCTCTCTCATAGAGCG +
Preference number: 5 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQFCMSC*QLSHRA
Trigger: CGCTCTATGAGAGAGCTGCAAGCAACTCATGCAGAA...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATTCTGCATGAGTTGCTaGCAGCTCTCTCATAGAGCG +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLFCMSC*QLSHRA
Trigger: CGCTCTATGAGAGAGCTGCAAGCAACTCATGCAGAA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAATCTGTAGAACTGAGTaGAGCAGTTTTGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: FHLMILRSQCNLVLLPAEICRTE*SSFGCL
Trigger: CAAGCACCCAAAACTGCTCAACTCAGTTCTACAGAT...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACACCCACTGCCCACTCTaGGGTTTTGGAAGTGACACG +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYTHCPL*GFGSDT
Trigger: CGTGTCACTTCCAAAACCCAAGAGTGGGCAGTGGGT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGATGCCTCTGGAGCATTaGCTTTCAAGCCTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRMPLEH*LSSLQV
Trigger: GACTTGGAGGCTTGAAAGCAAATGCTCCAGAGGCAT...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAAAGGAACATAGCCTGTTaGCAAACAGTGAAAACCCAC +
Preference number: 5 (lower is better)
Translates to: FHLMILRSQCNLVLLPAERNIAC*QTVKTH
Trigger: GTGGGTTTTCACTGTTTGCAAACAGGCTATGTTCCT...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACATCTATTCCATCTTCTaGCCATTAGCAGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNIYSIF*PLAGFE
Trigger: TTCAAAGCCTGCTAATGGCAAGAAGATGGAATAGAT...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCAAGACGAGAGTCATTATaGAAGCCATTAGAGCACAGA +
Preference number: 5 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSRRESL*KPLEHR
Trigger: TCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACAGTTGTTATGAAGATTaGCAGAGTTGGATGAGAGCA +
Preference number: 5 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNSCYED*QSWMRA
Trigger: TGCTCTCATCCAACTCTGCAAATCTTCATAACAACT...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCGCTGTTTCTCTCATCTaGTCTGAGATATACATTCCA +
Preference number: 5 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFAVSLI*SEIYIP
Trigger: TGGAATGTATATCTCAGACAAGATGAGAGAAACAGC...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CAGTGGTGTGAGATCGAGAGGCATTTAGAGCTTTTGGGTCATAGTGTTCATTGGCATGATTGCATCTGTTaGTCTCGTAATAGCCATACA +
Preference number: 5 (lower is better)
Translates to: QWCEIERHLELLGHSVHWHDCIC*SRNSHT
Trigger: TGTATGGCTATTACGAGACAAACAGATGCAATCATG...CCAATGAACACTATGACCCAAAAGCTCTAAATGCCTCTCGATCTCACACCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS TCA 90 bp ATGCTGGAGGAAGTCTTTGAACAACTTCTGGCTCTTCGCTGCGAATaGAATTTCCTAAGTCTTCAGTTGTTATTGATCCACTTGGTGGAA +
Preference number: 5 (lower is better)
Translates to: MLEEVFEQLLALRCE*NFLSLQLLLIHLVE
Trigger: TTCCACCAAGTGGATCAATAACAACTGAAGACTTAGGAAATTTCATTCGCAGCGAAGAGCCAGAAGTTGTTCAAAGACTTCCTCCAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000681587.1
CDS GCA 90 bp TTGCTTGATCCATGGGAACTCTTAATCGGAACCAGTATTCCACTGTaGCAAAATTTGGGATGTCTCCTTTTGTTCCAATCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLDPWELLIGTSIPL*QNLGCLLLFQSNLL
Trigger: CAGCAAGTTTGATTGGAACAAAAGGAGACATCCCAAATTTTGGCACAGTGGAATACTGGTTCCGATTAAGAGTTCCCATGGATCAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CCA 90 bp ACTCTGGGAATGCCAGCTCATTGTTCAGAGAACCTAGTTTCCAGGTaGAACTGCAATTTAGTCCAATTGAATATGGCAGTTTTCACACAA +
Preference number: 5 (lower is better)
Translates to: TLGMPAHCSENLVSR*NCNLVQLNMAVFTQ
Trigger: TTGTGTGAAAACTGCCATATTCAATTGGACTAAATTGCAGTTCCACCTGGAAACTAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCACTTCATTGTCCGTGTaGTTGAAGTTTCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCTSLSV*LKFLVT
Trigger: GGTTACAAGAAACTTCAACAACACGGACAATGAAGT...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAACCTGGCGAGACTTCATaGTCCGTGTTGTTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKPGETS*SVLLKF
Trigger: AAACTTCAACAACACGGACAATGAAGTCTCGCCAGG...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCCTGGCGAGACTTCATaGTCCGTGTTGTTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTPGETS*SVLLKF
Trigger: AAACTTCAACAACACGGACAATGAAGTCTCGCCAGG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGATTTTATCCTCCTGCTaGCGGGCATGCTGTTTAAGT +
Preference number: 5 (lower is better)
Translates to: QKRNQASESQILKTAIIMILSSC*RACCLS
Trigger: ACTTAAACAGCATGCCCGCAAGCAGGAGGATAAAAT...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACACTAGCCGTATTAACTaGGTGGCCATTCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNTSRIN*VAILLI
Trigger: AATTAAAAGAATGGCCACCAAGTTAATACGGCTAGT...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCAACTAGCCGTATTAACTaGGTGGCCATTCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSTSRIN*VAILLI
Trigger: AATTAAAAGAATGGCCACCAAGTTAATACGGCTAGT...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAATTATTGTATGGAGTTaGCCTGTAACCCTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAIIVWS*PVTLGL
Trigger: CAAACCCAGGGTTACAGGCAAACTCCATACAATAAT...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CCCTCTTCAATGGATCCAGTTTGGCTCACCAAGAGAAATCCACTGCTCTTTAACTGCTACATCTGCATCTaGGAATTTTATACCTTTCCT +
Preference number: 5 (lower is better)
Translates to: PSSMDPVWLTKRNPLLFNCYICI*EFYTFP
Trigger: AGGAAAGGTATAAAATTCCAAGATGCAGATGTAGCA...GTTAAAGAGCAGTGGATTTCTCTTGGTGAGCCAAACTGGATCCATTGAAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCCTTTGATCTGTAGCTaGCTGTTCTCGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTPLICS*LFSKLK
Trigger: CTTCAGCTTCGAGAACAGCAAGCTACAGATCAAAGG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCGATTCTGAGAGTTCTTaGCTTCTCTTGAAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCDSESS*LLLKLN
Trigger: ATTCAGCTTCAAGAGAAGCAAAGAACTCTCAGAATC...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp GAAACCCAACTGAAGTATCCACATGACAGCGTTCAATACTACCTCGCCACTTCATCAAGGATTTCAGTTTaGTCTGTTAAGTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: ETQLKYPHDSVQYYLATSSRISV*SVKSDF
Trigger: GAAGTCTGACTTAACAGACAAAACTGAAATCCTTGA...TGAAGTGGCGAGGTAGTATTGAACGCTGTCATGTGGATACTTCAGTTGGGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTACTAGGACTGGAGAGGTTTAGTCTGCAGATGTTTGTGGTCTCCAGAAGGTTCTTGTTCCAATCAAACTaGCTGTACAAAATATTCGGC +
Preference number: 5 (lower is better)
Translates to: LLGLERFSLQMFVVSRRFLFQSN*LYKIFG
Trigger: GCCGAATATTTTGTACAGCAAGTTTGATTGGAACAA...GAACCTTCTGGAGACCACAAACATCTGCAGACTAAACCTCTCCAGTCCTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAATTGGGATGTCTCCTTTaGTTCCAATCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: FHLMILRSQCNLVLLPAELGCLL*FQSNLL
Trigger: CAGCAAGTTTGATTGGAACAAAAGGAGACATCCCAA...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCGGGACTGCAGGTGGTaGCAACATCTTATTGTAATG +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTRDCRW*QHLIVM
Trigger: CATTACAATAAGATGTTGCAACCACCTGCAGTCCCG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCATTCCTAAGTCTTCAGTaGTTATTGATCCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPFLSLQ*LLIHLV
Trigger: CACCAAGTGGATCAATAACAACTGAAGACTTAGGAA...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTAGAAGATGCCAAGCTTaGTTCTGCAAGCTGACCTTC +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTRRCQA*FCKLTF
Trigger: GAAGGTCAGCTTGCAGAACAAAGCTTGGCATCTTCT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACTCAACAAACAGCCGTaGGATAGTGTCATCCATGGT +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLNKQP*DSVIHG
Trigger: ACCATGGATGACACTATCCAACGGCTGTTTGTTGAG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCTCAACAAACAGCCGTaGGATAGTGTCATCCATGGT +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLNKQP*DSVIHG
Trigger: ACCATGGATGACACTATCCAACGGCTGTTTGTTGAG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCAAAAAACATCGATATTTaGCTCAATGAGGTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: CYEDLQSWMRARFFSEMAKNIDI*LNEVPP
Trigger: GGGAGGGACCTCATTGAGCAAAATATCGATGTTTTT...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CTGTTTCTCTCATCTTGTCTGAGATATACATTCCATACAGGTGACTGGGTCCCAAGTTGTTATGAAGATTaGCAGAGTTGGATGAGAGCA +
Preference number: 5 (lower is better)
Translates to: LFLSSCLRYTFHTGDWVPSCYED*QSWMRA
Trigger: TGCTCTCATCCAACTCTGCAAATCTTCATAACAACT...TGGGACCCAGTCACCTGTATGGAATGTATATCTCAGACAAGATGAGAGAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGTTAGTCTGCAGATGTTaGTGGTCTCCAGAAGGTTCC +
Preference number: 5 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRLVCRC*WSPEGS
Trigger: GGAACCTTCTGGAGACCACAAACATCTGCAGACTAA...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTTAGTCTGCAGATGTTaGTGGTCTCCAGAAGGTTCC +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLVCRC*WSPEGS
Trigger: GGAACCTTCTGGAGACCACAAACATCTGCAGACTAA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAACCTTCTTGTGAAACCTaGGGAACATGTGGAACAGTC +
Preference number: 5 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKPSCET*GTCGTV
Trigger: GACTGTTCCACATGTTCCCAAGGTTTCACAAGAAGG...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 90 bp ATTAGCATGTTTCTTGTCTTTTCCAGCTCTTGCACCGTTTCTGCATaGGTTGCTTGCAGCTCTCTCATAGAGCGTTCTAGATCTTTATTA +
Preference number: 5 (lower is better)
Translates to: ISMFLVFSSSCTVSA*VACSSLIERSRSLL
Trigger: TAATAAAGATCTAGAACGCTCTATGAGAGAGCTGCAAGCAACTCATGCAGAAACGGTGCAAGAGCTGGAAAAGACAAGAAACATGCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS GCA 90 bp GGAATGCCAGCTCATTGTTCAGAGAACCTAGTTTCCAGGTGGAACTaGAATTTAGTCCAATTGAATATGGCAGTTTTCACACAACTGTTT +
Preference number: 5 (lower is better)
Translates to: GMPAHCSENLVSRWN*NLVQLNMAVFTQLF
Trigger: AAACAGTTGTGTGAAAACTGCCATATTCAATTGGACTAAATTGCAGTTCCACCTGGAAACTAGGTTCTCTGAACAATGAGCTGGCATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCCTGGCGAGACTTCATaGTCCGTGTTGTTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHPGETS*SVLLKF
Trigger: AAACTTCAACAACACGGACAATGAAGTCTCGCCAGG...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATACCTGGCGAGACTTCATaGTCCGTGTTGTTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIPGETS*SVLLKF
Trigger: AAACTTCAACAACACGGACAATGAAGTCTCGCCAGG...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTATTTTATCCTCCTGCTaGCGGGCATGCTGTTTAAGT +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTILSSC*RACCLS
Trigger: ACTTAAACAGCATGCCCGCAAGCAGGAGGATAAAAT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAATTTTATCCTCCTGCTaGCGGGCATGCTGTTTAAGT +
Preference number: 5 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAILSSC*RACCLS
Trigger: ACTTAAACAGCATGCCCGCAAGCAGGAGGATAAAAT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATACCTTTGATCTGTAGCTaGCTGTTCTCGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIPLICS*LFSKLK
Trigger: CTTCAGCTTCGAGAACAGCAAGCTACAGATCAAAGG...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GTAGATCACATTGCTATAGTTATAGTAGACCCACTGCCCACTCTTGGGTTTTGGTCAAGGATTTCAGTTTaGTCTGTTAAGTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: VDHIAIVIVDPLPTLGFWSRISV*SVKSDF
Trigger: GAAGTCTGACTTAACAGACAAAACTGAAATCCTTGA...CCAAAACCCAAGAGTGGGCAGTGGGTCTACTATAACTATAGCAATGTGATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTTCTGCATGAGTTGCTaGCAGCTCTCTCATAGAGCG +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYFCMSC*QLSHRA
Trigger: CGCTCTATGAGAGAGCTGCAAGCAACTCATGCAGAA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGCTCGCACTACGGGAGTaGTCTGTAGTTCAAAATCAT +
Preference number: 5 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRLALRE*SVVQNH
Trigger: ATGATTTTGAACTACAGACAACTCCCGTAGTGCGAG...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAACTCGCACTACGGGAGTaGTCTGTAGTTCAAAATCAT +
Preference number: 5 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKLALRE*SVVQNH
Trigger: ATGATTTTGAACTACAGACAACTCCCGTAGTGCGAG...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GTAGATCACATTGCTATAGTTATAGTAGACCCACTGCCCACTCTTGGGTTTTGGTTGTTCCAATCAAACTaGCTGTACAAAATATTCGGC +
Preference number: 5 (lower is better)
Translates to: VDHIAIVIVDPLPTLGFWLFQSN*LYKIFG
Trigger: GCCGAATATTTTGTACAGCAAGTTTGATTGGAACAA...CCAAAACCCAAGAGTGGGCAGTGGGTCTACTATAACTATAGCAATGTGATCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS-3UTR CAA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCACTCGATAAAGTCGAATaGCTTGATCCATGGGAACTC +
Preference number: 5 (lower is better)
Translates to: RRESLLKPLEHRWFKLYALDKVE*LDPWEL
Trigger: GAGTTCCCATGGATCAAGCAATTCGACTTTATCGAG...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTATCTGTAGAACTGAGTaGAGCAGTTTTGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTICRTE*SSFGCL
Trigger: CAAGCACCCAAAACTGCTCAACTCAGTTCTACAGAT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAATCTGTAGAACTGAGTaGAGCAGTTTTGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLICRTE*SSFGCL
Trigger: CAAGCACCCAAAACTGCTCAACTCAGTTCTACAGAT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATACGGGACTGCAGGTGGTaGCAACATCTTATTGTAATG +
Preference number: 5 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIRDCRW*QHLIVM
Trigger: CATTACAATAAGATGTTGCAACCACCTGCAGTCCCG...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GGCTCACCAAGAGAAATCCACTGCTCTTTAACCCAAAAGGTGGTAAGCTTTTCATTGTTATTGATCCACTaGGTGGAAGGTAAGCAAATT +
Preference number: 5 (lower is better)
Translates to: GSPREIHCSLTQKVVSFSLLLIH*VEGKQI
Trigger: AATTTGCTTACCTTCCACCAAGTGGATCAATAACAA...TGAAAAGCTTACCACCTTTTGGGTTAAAGAGCAGTGGATTTCTCTTGGTGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp CAGCATCTACCTCAGAAAACAGGTCATGATCGAAGTCTAAGAGTACCAGATTGCCACATCATCTTTTCCTaGCTGCATTTTCTCAGTATT +
Preference number: 5 (lower is better)
Translates to: QHLPQKTGHDRSLRVPDCHIIFS*LHFLSI
Trigger: AATACTGAGAAAATGCAGCAAGGAAAAGATGATGTG...GCAATCTGGTACTCTTAGACTTCGATCATGACCTGTTTTCTGAGGTAGATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATATGCCTCTGGAGCATTaGCTTTCAAGCCTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: YSTGPTMYINKLILYGCHMPLEH*LSSLQV
Trigger: GACTTGGAGGCTTGAAAGCAAATGCTCCAGAGGCAT...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACATGCCTCTGGAGCATTaGCTTTCAAGCCTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYMPLEH*LSSLQV
Trigger: GACTTGGAGGCTTGAAAGCAAATGCTCCAGAGGCAT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTATGCCTCTGGAGCATTaGCTTTCAAGCCTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFMPLEH*LSSLQV
Trigger: GACTTGGAGGCTTGAAAGCAAATGCTCCAGAGGCAT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGAGATAACAGAATGCATACATACAACTTGATTCCTAGCTCAGTCCTTTTCCCAAGGAGGTTAAATGGCTaGAACATACATACCACAGGC +
Preference number: 5 (lower is better)
Translates to: RDNRMHTYNLIPSSVLFPRRLNG*NIHTTG
Trigger: GCCTGTGGTATGTATGTTCAAGCCATTTAACCTCCT...TGGGAAAAGGACTGAGCTAGGAATCAAGTTGTATGTATGCATTCTGTTATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp CAGAAAAGGAATCAGGCAAGTGAGTCACAAATCTTGAAAACAGCCATCATCATGAGGCATTTAGAGCTTTaGGGTCATAGTGTTCATTGG +
Preference number: 5 (lower is better)
Translates to: QKRNQASESQILKTAIIMRHLEL*GHSVHW
Trigger: CCAATGAACACTATGACCCAAAAGCTCTAAATGCCT...CATGATGATGGCTGTTTTCAAGATTTGTGACTCACTTGCCTGATTCCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp CCTAATTCCGAGAATGATATATCACTGGGAAATTTGGCCAGGTATCACAGTCCACATGATTGCATCTGTTaGTCTCGTAATAGCCATACA +
Preference number: 5 (lower is better)
Translates to: PNSENDISLGNLARYHSPHDCIC*SRNSHT
Trigger: TGTATGGCTATTACGAGACAAACAGATGCAATCATG...TGGACTGTGATACCTGGCCAAATTTCCCAGTGATATATCATTCTCGGAATTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS TCA 90 bp AGGTATCGATCCAAGTCCATATTCATTGGCACTGGGAAATACATATaGTCATCAAACTGTGGATCATTGCTACTGGGAATGATAGCTGTA +
Preference number: 5 (lower is better)
Translates to: RYRSKSIFIGTGKYI*SSNCGSLLLGMIAV
Trigger: TACAGCTATCATTCCCAGTAGCAATGATCCACAGTTTGATGATCATATGTATTTCCCAGTGCCAATGAATATGGACTTGGATCGATACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 90 bp CTCCTGGGTATCACTATCATCAAAAACATAAAAACTCAGAGACTCTaGCTTAAGGTATCGATCCAAGTCCATATTCATTGGCACTGGGAA +
Preference number: 5 (lower is better)
Translates to: LLGITIIKNIKTQRL*LKVSIQVHIHWHWE
Trigger: TTCCCAGTGCCAATGAATATGGACTTGGATCGATACCTTAAGTCAGAGTCTCTGAGTTTTTATGTTTTTGATGATAGTGATACCCAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS GCA 90 bp AATTGTTTCTCAAGACTGCAGCATTTTAAACGCTGCTCTTTAAGTTaGATGTTTAATTCATCCCCATTTGCCATCAAAGCATCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: NCFSRLQHFKRCSLS*MFNSSPFAIKASWL
Trigger: CAGCCACGATGCTTTGATGGCAAATGGGGATGAATTAAACATGCAACTTAAAGAGCAGCGTTTAAAATGCTGCAGTCTTGAGAAACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262135.9
ENST00000562230.5
ENST00000563746.5
ENST00000564374.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000680907.1
CDS-3UTR CAA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAATCATTGTCCGTGTTGTaGAAGTTTCTTGTAACCCTC +
Preference number: 5 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQSLSVL*KFLVTL
Trigger: GAGGGTTACAAGAAACTTCAACAACACGGACAATGA...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTCATTGTCCGTGTTGTaGAAGTTTCTTGTAACCCTC +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTSLSVL*KFLVTL
Trigger: GAGGGTTACAAGAAACTTCAACAACACGGACAATGA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGAGATAACAGAATGCATACATACAACTTGATTCCTAGCTCAGTCCTTTTCCCATCATTGTCCGTGTTGTaGAAGTTTCTTGTAACCCTC +
Preference number: 5 (lower is better)
Translates to: RDNRMHTYNLIPSSVLFPSLSVL*KFLVTL
Trigger: GAGGGTTACAAGAAACTTCAACAACACGGACAATGA...TGGGAAAAGGACTGAGCTAGGAATCAAGTTGTATGTATGCATTCTGTTATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS-3UTR CAA 90 bp AGCAAAGTTAAATATGTTCCAGAGACTGAAGTGATGTTTTCATTAGTAAACCCCCCTGGCGAGACTTCATaGTCCGTGTTGTTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: SKVKYVPETEVMFSLVNPPGETS*SVLLKF
Trigger: AAACTTCAACAACACGGACAATGAAGTCTCGCCAGG...GGGGTTTACTAATGAAAACATCACTTCAGTCTCTGGAACATATTTAACTTTGCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CAA 90 bp TACATCCTGCCTTGTTCCAAACAAGATTCAAGGTGGGGTATTCAATTAAGTTTAATTTTATCCTCCTGCTaGCGGGCATGCTGTTTAAGT +
Preference number: 5 (lower is better)
Translates to: YILPCSKQDSRWGIQLSLILSSC*RACCLS
Trigger: ACTTAAACAGCATGCCCGCAAGCAGGAGGATAAAAT...TAAACTTAATTGAATACCCCACCTTGAATCTTGTTTGGAACAAGGCAGGATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCTCATGAACTTTCTCTaGCAGCTGCTCAATCATTTC +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLMNFL*QLLNHF
Trigger: GAAATGATTGAGCAGCTGCAAGAGAAAGTTCATGAG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTATTATTGTATGGAGTTaGCCTGTAACCCTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTIIVWS*PVTLGL
Trigger: CAAACCCAGGGTTACAGGCAAACTCCATACAATAAT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTATTGTATGGAGTTaGCCTGTAACCCTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQIIVWS*PVTLGL
Trigger: CAAACCCAGGGTTACAGGCAAACTCCATACAATAAT...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCCTTTGATCTGTAGCTaGCTGTTCTCGAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYPLICS*LFSKLK
Trigger: CTTCAGCTTCGAGAACAGCAAGCTACAGATCAAAGG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTCCACTTAATGATCCTAAGAAGTCAGTGCAATCTGGTTCTTCTCCCTGCAGAATCAAGGATTTCAGTTTaGTCTGTTAAGTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: FHLMILRSQCNLVLLPAESRISV*SVKSDF
Trigger: GAAGTCTGACTTAACAGACAAAACTGAAATCCTTGA...TTCTGCAGGGAGAAGAACCAGATTGCACTGACTTCTTAGGATCATTAAGTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGTCTTTTCCAGCTCTaGCACCGTTTCTGCATGAGT +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYCLFQL*HRFCMS
Trigger: ACTCATGCAGAAACGGTGCAAGAGCTGGAAAAGACA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TGTTATGAAGATTTGCAGAGTTGGATGAGAGCAAGATTCTTCTCGGAGATGGCATTGTTCCAATCAAACTaGCTGTACAAAATATTCGGC +
Preference number: 5 (lower is better)
Translates to: CYEDLQSWMRARFFSEMALFQSN*LYKIFG
Trigger: GCCGAATATTTTGTACAGCAAGTTTGATTGGAACAA...TGCCATCTCCGAGAAGAATCTTGCTCTCATCCAACTCTGCAAATCTTCATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTTGGGATGTCTCCTTTaGTTCCAATCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTLGCLL*FQSNLL
Trigger: CAGCAAGTTTGATTGGAACAAAAGGAGACATCCCAA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGTTGGGATGTCTCCTTTaGTTCCAATCAAACTTGCTG +
Preference number: 5 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRLGCLL*FQSNLL
Trigger: CAGCAAGTTTGATTGGAACAAAAGGAGACATCCCAA...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATCGGGACTGCAGGTGGTaGCAACATCTTATTGTAATG +
Preference number: 5 (lower is better)
Translates to: YSTGPTMYINKLILYGCHRDCRW*QHLIVM
Trigger: CATTACAATAAGATGTTGCAACCACCTGCAGTCCCG...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTCAAACTGTGGATCATaGCTACTGGGAATGATAGCT +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTSNCGS*LLGMIA
Trigger: AGCTATCATTCCCAGTAGCAATGATCCACAGTTTGA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAAGTCTTCAGTTGTTATaGATCCACTTGGTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLSLQLL*IHLVEG
Trigger: ACCTTCCACCAAGTGGATCAATAACAACTGAAGACT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAAGAAGATGCCAAGCTTaGTTCTGCAAGCTGACCTTC +
Preference number: 5 (lower is better)
Translates to: RSYSTGPTMYINKLILYGRRCQA*FCKLTF
Trigger: GAAGGTCAGCTTGCAGAACAAAGCTTGGCATCTTCT...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTAAAAACATCGATATTTaGCTCAATGAGGTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTKNIDI*LNEVPP
Trigger: GGGAGGGACCTCATTGAGCAAAATATCGATGTTTTT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATACAAGTCATCTCTGTATaGCTTGTAGACAGACTGGAG +
Preference number: 5 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIQVISV*LVDRLE
Trigger: CTCCAGTCTGTCTACAAGCAATACAGAGATGACTTG...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAACAACAAACATGTGGTaGTTTACTAGGACTGGAGAG +
Preference number: 5 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQTTNMW*FTRTGE
Trigger: CTCTCCAGTCCTAGTAAACAACCACATGTTTGTTGT...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTCCTTCTTGTGAAACCTaGGGAACATGTGGAACAGTC +
Preference number: 5 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFPSCET*GTCGTV
Trigger: GACTGTTCCACATGTTCCCAAGGTTTCACAAGAAGG...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 90 bp ATTTCTGTTTCATCTTCAGAAGATGCCAAGCTTTGTTCTGCAAGCTaGCCTTCAGATAGTAAAGACACATCATCTTTTCCTTGCTGCATT +
Preference number: 5 (lower is better)
Translates to: ISVSSSEDAKLCSAS*PSDSKDTSSFPCCI
Trigger: AATGCAGCAAGGAAAAGATGATGTGTCTTTACTATCTGAAGGTCAGCTTGCAGAACAAAGCTTGGCATCTTCTGAAGATGAAACAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000568009.1
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000681587.1
CDS TCA 90 bp AGTCAGCATATTAATTTCTATTTCTGGTATATGCTCTACCTCTGGTaGAATTTCCTTCCTATCTTCAGGAGGAGGAGAAGTCTCATCACT +
Preference number: 5 (lower is better)
Translates to: SQHINFYFWYMLYLW*NFLPIFRRRRSLIT
Trigger: AGTGATGAGACTTCTCCTCCTCCTGAAGATAGGAAGGAAATTTCACCAGAGGTAGAGCATATACCAGAAATAGAAATTAATATGCTGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TACATCCTGCCTTGTTCCAAACAAGATTCAAGGTGGGGTATTCAATTAAGTTTATCATTGTCCGTGTTGTaGAAGTTTCTTGTAACCCTC +
Preference number: 5 (lower is better)
Translates to: YILPCSKQDSRWGIQLSLSLSVL*KFLVTL
Trigger: GAGGGTTACAAGAAACTTCAACAACACGGACAATGA...TAAACTTAATTGAATACCCCACCTTGAATCTTGTTTGGAACAAGGCAGGATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CAA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAACTTCATTGTCCGTGTaGTTGAAGTTTCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQTSLSV*LKFLVT
Trigger: GGTTACAAGAAACTTCAACAACACGGACAATGAAGT...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGACTTCATTGTCCGTGTaGTTGAAGTTTCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRTSLSV*LKFLVT
Trigger: GGTTACAAGAAACTTCAACAACACGGACAATGAAGT...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACATTTTATCCTCCTGCTaGCGGGCATGCTGTTTAAGT +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYILSSC*RACCLS
Trigger: ACTTAAACAGCATGCCCGCAAGCAGGAGGATAAAAT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGATTCTGAGAGTTCTTaGCTTCTCTTGAAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLDSESS*LLLKLN
Trigger: ATTCAGCTTCAAGAGAAGCAAAGAACTCTCAGAATC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTTAATTCATCCCCATTaGCCATCAAAGCATCGTGGC +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYLIHPH*PSKHRG
Trigger: GCCACGATGCTTTGATGGCAAATGGGGATGAATTAA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCTCGCACTACGGGAGTaGTCTGTAGTTCAAAATCAT +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYLALRE*SVVQNH
Trigger: ATGATTTTGAACTACAGACAACTCCCGTAGTGCGAG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCTCGATAAAGTCGAATaGCTTGATCCATGGGAACTC +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYLDKVE*LDPWEL
Trigger: GAGTTCCCATGGATCAAGCAATTCGACTTTATCGAG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATTCAAACTGTGGATCATaGCTACTGGGAATGATAGCT +
Preference number: 5 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHSNCGS*LLGMIA
Trigger: AGCTATCATTCCCAGTAGCAATGATCCACAGTTTGA...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAACCAAGTCCATATTCATaGGCACTGGGAAATACATAT +
Preference number: 5 (lower is better)
Translates to: IDFCGQIILYWSHNVHQQPSPYS*ALGNTY
Trigger: ATATGTATTTCCCAGTGCCAATGAATATGGACTTGG...TTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGCCAAGTCCATATTCATaGGCACTGGGAAATACATAT +
Preference number: 5 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRPSPYS*ALGNTY
Trigger: ATATGTATTTCCCAGTGCCAATGAATATGGACTTGG...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATTCCTAAGTCTTCAGTaGTTATTGATCCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLFLSLQ*LLIHLV
Trigger: CACCAAGTGGATCAATAACAACTGAAGACTTAGGAA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTTCCTAAGTCTTCAGTaGTTATTGATCCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTFLSLQ*LLIHLV
Trigger: CACCAAGTGGATCAATAACAACTGAAGACTTAGGAA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCAAGTCATCTCTGTATaGCTTGTAGACAGACTGGAG +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYQVISV*LVDRLE
Trigger: CTCCAGTCTGTCTACAAGCAATACAGAGATGACTTG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAAGACGAGAGTCATTATaGAAGCCATTAGAGCACAGA +
Preference number: 5 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIRRESL*KPLEHR
Trigger: TCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAGCTGTTTCTCTCATCTaGTCTGAGATATACATTCCA +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLAVSLI*SEIYIP
Trigger: TGGAATGTATATCTCAGACAAGATGAGAGAAACAGC...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGAAATCTCTCTCCTGGTaGTTTTGTCCTACACAAAGA +
Preference number: 5 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRKSLSW*FCPTQR
Trigger: TCTTTGTGTAGGACAAAACAACCAGGAGAGAGATTT...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAAATGCGAGACTCTGTTaGATATTCTTGGAGATAGGA +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLNARLC*IFLEIG
Trigger: TCCTATCTCCAAGAATATCAAACAGAGTCTCGCATT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563746.5
ENST00000647211.2
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTAATGCGAGACTCTGTTaGATATTCTTGGAGATAGGA +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTNARLC*IFLEIG
Trigger: TCCTATCTCCAAGAATATCAAACAGAGTCTCGCATT...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563746.5
ENST00000647211.2
CDS TCA 90 bp AATTTCCATTTCAATATAACATGGATGGTGCCAGCAGGATGCTTTTaGTGGTCTGTTAACTCAAATATTCCTGAGATACACCTGTCATGT +
Preference number: 5 (lower is better)
Translates to: NFHFNITWMVPAGCF*WSVNSNIPEIHLSC
Trigger: ACATGACAGGTGTATCTCAGGAATATTTGAGTTAACAGACCATCAAAAGCATCCTGCTGGCACCATCCATGTTATATTGAAATGGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTCATTGTCCGTGTTGTaGAAGTTTCTTGTAACCCTC +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYSLSVL*KFLVTL
Trigger: GAGGGTTACAAGAAACTTCAACAACACGGACAATGA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TACATCCTGCCTTGTTCCAAACAAGATTCAAGGTGGGGTATTCAATTAAGTTTAACTTCATTGTCCGTGTaGTTGAAGTTTCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: YILPCSKQDSRWGIQLSLTSLSV*LKFLVT
Trigger: GGTTACAAGAAACTTCAACAACACGGACAATGAAGT...TAAACTTAATTGAATACCCCACCTTGAATCTTGTTTGGAACAAGGCAGGATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAACTAGCCGTATTAACTaGGTGGCCATTCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLTSRIN*VAILLI
Trigger: AATTAAAAGAATGGCCACCAAGTTAATACGGCTAGT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAATTATTGTATGGAGTTaGCCTGTAACCCTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: RSYSTGPTMYINKLILYGIIVWS*PVTLGL
Trigger: CAAACCCAGGGTTACAGGCAAACTCCATACAATAAT...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAGATTCTGAGAGTTCTTaGCTTCTCTTGAAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIDSESS*LLLKLN
Trigger: ATTCAGCTTCAAGAGAAGCAAAGAACTCTCAGAATC...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTTCAAGGATTTCAGTTTaGTCTGTTAAGTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTSRISV*SVKSDF
Trigger: GAAGTCTGACTTAACAGACAAAACTGAAATCCTTGA...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AAAACCACTCAGTTAATCCCAGGGTATAATCTGGCTGTTTTAAATTACTGCAGGAAGTTCATCAAGTTGTaGCTTTTGTTCCAGATACTG +
Preference number: 5 (lower is better)
Translates to: KTTQLIPGYNLAVLNYCRKFIKL*LLFQIL
Trigger: CAGTATCTGGAACAAAAGCAACAACTTGATGAACTT...CCTGCAGTAATTTAAAACAGCCAGATTATACCCTGGGATTAACTGAGTGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAATTGTTCCAATCAAACTaGCTGTACAAAATATTCGGC +
Preference number: 5 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKLFQSN*LYKIFG
Trigger: GCCGAATATTTTGTACAGCAAGTTTGATTGGAACAA...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATTGTTCCAATCAAACTaGCTGTACAAAATATTCGGC +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLLFQSN*LYKIFG
Trigger: GCCGAATATTTTGTACAGCAAGTTTGATTGGAACAA...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTCAAACTGTGGATCATaGCTACTGGGAATGATAGCT +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYSNCGS*LLGMIA
Trigger: AGCTATCATTCCCAGTAGCAATGATCCACAGTTTGA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAATTGTTATTGATCCACTaGGTGGAAGGTAAGCAAATT +
Preference number: 5 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKLLLIH*VEGKQI
Trigger: AATTTGCTTACCTTCCACCAAGTGGATCAATAACAA...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACAGTCTTCAGTTGTTATaGATCCACTTGGTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYSLQLL*IHLVEG
Trigger: ACCTTCCACCAAGTGGATCAATAACAACTGAAGACT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAAGTCTTCAGTTGTTATaGATCCACTTGGTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: RSYSTGPTMYINKLILYGSLQLL*IHLVEG
Trigger: ACCTTCCACCAAGTGGATCAATAACAACTGAAGACT...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTATGGAGAACTCACATCATCTTTTCCTaGCTGCATTTTCTCAGTATT +
Preference number: 5 (lower is better)
Translates to: TLSRRYKLLRRYCPLWRTHIIFS*LHFLSI
Trigger: AATACTGAGAAAATGCAGCAAGGAAAAGATGATGTG...AGTTCTCCATAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTACACATCATCTTTTCCTaGCTGCATTTTCTCAGTATT +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLHIIFS*LHFLSI
Trigger: AATACTGAGAAAATGCAGCAAGGAAAAGATGATGTG...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTAAAAACATCGATATTTaGCTCAATGAGGTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFKNIDI*LNEVPP
Trigger: GGGAGGGACCTCATTGAGCAAAATATCGATGTTTTT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATAAAAACATCGATATTTaGCTCAATGAGGTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: YSTGPTMYINKLILYGCHKNIDI*LNEVPP
Trigger: GGGAGGGACCTCATTGAGCAAAATATCGATGTTTTT...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCCCATTAAATTCCTTTGCAGCATaGATTCACAGCTCCATTAAA +
Preference number: 5 (lower is better)
Translates to: DFLTLSRRYKLLRRYCPLNSFAA*IHSSIK
Trigger: TTTAATGGAGCTGTGAATCAATGCTGCAAAGGAATT...TAATGGGCAGTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATATCTATTCCATCTTCTaGCCATTAGCAGGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHIYSIF*PLAGFE
Trigger: TTCAAAGCCTGCTAATGGCAAGAAGATGGAATAGAT...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGACGAGAGTCATTATTGAAGCCATTAGAGCACAGATGGTTCAAACTATATGCAATAATTTATGTTTTGTaGTGGGAACATGAGTGCACG +
Preference number: 5 (lower is better)
Translates to: RRESLLKPLEHRWFKLYAIIYVL*WEHECT
Trigger: CGTGCACTCATGTTCCCACAACAAAACATAAATTAT...TGCATATAGTTTGAACCATCTGTGCTCTAATGGCTTCAATAATGACTCTCGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp TTTAACCCAAAAGGTGGTAAGCTTTTCAATGGCCTCCAGTTACCACAAGATAAAATAATTTATGTTTTGTaGTGGGAACATGAGTGCACG +
Preference number: 5 (lower is better)
Translates to: FNPKGGKLFNGLQLPQDKIIYVL*WEHECT
Trigger: CGTGCACTCATGTTCCCACAACAAAACATAAATTAT...TTTATCTTGTGGTAACTGGAGGCCATTGAAAAGCTTACCACCTTTTGGGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATCTCTCCTGGTTGTTTaGTCCTACACAAAGATGACA +
Preference number: 5 (lower is better)
Translates to: RSYSTGPTMYINKLILYGSLLVV*SYTKMT
Trigger: TGTCATCTTTGTGTAGGACAAAACAACCAGGAGAGA...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000647211.2
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACACTTCATTGTCCGTGTaGTTGAAGTTTCTTGTAACC +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYTSLSV*LKFLVT
Trigger: GGTTACAAGAAACTTCAACAACACGGACAATGAAGT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATGTCATGATTCTGAGAGTTCTTaGCTTCTCTTGAAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: YSTGPTMYINKLILYGCHDSESS*LLLKLN
Trigger: ATTCAGCTTCAAGAGAAGCAAAGAACTCTCAGAATC...ATGACATCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGAGATTCTGAGAGTTCTTaGCTTCTCTTGAAGCTGAAT +
Preference number: 5 (lower is better)
Translates to: RSYSTGPTMYINKLILYGDSESS*LLLKLN
Trigger: ATTCAGCTTCAAGAGAAGCAAAGAACTCTCAGAATC...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp TCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATAAAGTTCATCAAGTTGTaGCTTTTGTTCCAGATACTG +
Preference number: 5 (lower is better)
Translates to: SVVRSYSTGPTMYINKLIKFIKL*LLFQIL
Trigger: CAGTATCTGGAACAAAAGCAACAACTTGATGAACTT...TATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCCAAGTCCATATTCATaGGCACTGGGAAATACATAT +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYPSPYS*ALGNTY
Trigger: ATATGTATTTCCCAGTGCCAATGAATATGGACTTGG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTTCCTAAGTCTTCAGTaGTTATTGATCCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYFLSLQ*LLIHLV
Trigger: CACCAAGTGGATCAATAACAACTGAAGACTTAGGAA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GAATTTATAGATTTCTGTGGTCAGATCATACTCTACTGGTCCCACAATGTACATAATTCCTTTGCAGCATaGATTCACAGCTCCATTAAA +
Preference number: 5 (lower is better)
Translates to: EFIDFCGQIILYWSHNVHNSFAA*IHSSIK
Trigger: TTTAATGGAGCTGTGAATCAATGCTGCAAAGGAATT...ATGTACATTGTGGGACCAGTAGAGTATGATCTGACCACAGAAATCTATAAATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CCA 90 bp ACTTTGTTGATATGGATTTCAAATAGATTTTCGCCTCGTTCTAAGTaGATGGTTTCATCAAATTCATCAACAGAGTCATCTGGCATGATT +
Preference number: 5 (lower is better)
Translates to: TLLIWISNRFSPRSK*MVSSNSSTESSGMI
Trigger: AATCATGCCAGATGACTCTGTTGATGAATTTGATGAAACCATCCACTTAGAACGAGGCGAAAATCTATTTGAAATCCATATCAACAAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTGCTACATCTGCATCTaGGAATTTTATACCTTTCCT +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYCYICI*EFYTFP
Trigger: AGGAAAGGTATAAAATTCCAAGATGCAGATGTAGCA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACAAGTTCATCAAGTTGTaGCTTTTGTTCCAGATACTG +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYKFIKL*LLFQIL
Trigger: CAGTATCTGGAACAAAAGCAACAACTTGATGAACTT...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTAAGTTCATCAAGTTGTaGCTTTTGTTCCAGATACTG +
Preference number: 5 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFKFIKL*LLFQIL
Trigger: CAGTATCTGGAACAAAAGCAACAACTTGATGAACTT...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACTTGTTATTGATCCACTaGGTGGAAGGTAAGCAAATT +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYLLLIH*VEGKQI
Trigger: AATTTGCTTACCTTCCACCAAGTGGATCAATAACAA...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS-3UTR CAA 90 bp GATATACATTCCATACAGGTGACTGGGTCCCATAAGTTTTCTAAGAAAAACTTTTTTTCTGATGGCTGTTaGATATTCTTGGAGATAGGA +
Preference number: 5 (lower is better)
Translates to: DIHSIQVTGSHKFSKKNFFSDGC*IFLEIG
Trigger: TCCTATCTCCAAGAATATCAAACAGCCATCAGAAAA...AAAGTTTTTCTTAGAAAACTTATGGGACCCAGTCACCTGTATGGAATGTATATC
36% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000621565.5
CDS-3UTR CAA 90 bp AGATCATACTCTACTGGTCCCACAATGTACATCAACAAATTAATATTGTACGGATTTTCTGATGGCTGTTaGATATTCTTGGAGATAGGA +
Preference number: 5 (lower is better)
Translates to: RSYSTGPTMYINKLILYGFSDGC*IFLEIG
Trigger: TCCTATCTCCAAGAATATCAAACAGCCATCAGAAAA...TCCGTACAATATTAATTTGTTGATGTACATTGTGGGACCAGTAGAGTATGATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262135.9
ENST00000621565.5
CDS-3UTR CAA 90 bp ATGCAAATAGACTTTCTCACGCTATCACGTAGGTATAAATTATTGAGAAGGTACCGTAGGTATAAATTATaGAGAAGGTACTGCCCATTA +
Preference number: 5 (lower is better)
Translates to: MQIDFLTLSRRYKLLRRYRRYKL*RRYCPL
Trigger: TAATGGGCAGTACCTTCTCAATAATTTATACCTACG...GTACCTTCTCAATAATTTATACCTACGTGATAGCGTGAGAAAGTCTATTTGCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CCA 72 bp CTGCAGCTAGCTACCGTTGCTATAGCGCCGACAGCGTaGCGGGCGGCTGGCCGAGAGGAGCACGGGAGAAAC +
Preference number: 6 (lower is better)
Translates to: LQLATVAIAPTA*RAAGREEHGRN
Trigger: GTTTCTCCCGTGCTCCTCTCGGCCAGCCGCCCGCCACGCTGTCGGCGCTATAGCAACGGTAGCTAGCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262135.9
ENST00000564374.5
ENST00000566096.5
ENST00000679110.1
CDS CCA 72 bp TACCGTTGCTATAGCGCCGACAGCGTGGCGGGCGGCTaGCCGAGAGGAGCACGGGAGAAACATGGCAGGCTC +
Preference number: 6 (lower is better)
Translates to: YRCYSADSVAGG*PRGAREKHGRL
Trigger: GAGCCTGCCATGTTTCTCCCGTGCTCCTCTCGGCCAGCCGCCCGCCACGCTGTCGGCGCTATAGCAACGGTA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566096.5
CDS CAA 72 bp TATCTTTCACAGGCAAGTCTCCTGCAGTCTCATCAGTaGGACCAGACATGGCCGTGCCACTGGCCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: YLSQASLLQSHQ*DQTWPCHWPCS
Trigger: GCTGCAGGGCCAGTGGCACGGCCATGTCTGGTCCAACTGATGAGACTGCAGGAGACTTGCCTGTGAAAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562230.5
CDS CAA 72 bp TATCTTTCACAGGCAAGTCTCCTGCAGTCTCATCAGTaGGACCAGACATGGCCTAGCGTGCCACTGGCCCTG +
Preference number: 6 (lower is better)
Translates to: YLSQASLLQSHQ*DQTWPSVPLAL
Trigger: CAGGGCCAGTGGCACGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCAGGAGACTTGCCTGTGAAAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000566096.5
ENST00000568653.7
ENST00000621565.5
ENST00000647211.2
ENST00000679110.1
ENST00000680193.1
ENST00000680907.1
CDS CAA 90 bp TTAGACCTGTATCTTTCACAGGCAAGTCTCCTGCAGTCTCATCAGTaGGACCAGACATGGCCTAGCACTGCACTCCAGCCTGGGCAACGG +
Preference number: 6 (lower is better)
Translates to: LDLYLSQASLLQSHQ*DQTWPSTALQPGQR
Trigger: CCGTTGCCCAGGCTGGAGTGCAGTGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCAGGAGACTTGCCTGTGAAAGATACAGGTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569716.1
CDS CAA 72 bp TATCTTTCACAGGCAAGTCTCCTGCAGTCTCATCAGTaGGACCAGACATGGCCTAGCACTGCACTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: YLSQASLLQSHQ*DQTWPSTALQP
Trigger: AGGCTGGAGTGCAGTGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCAGGAGACTTGCCTGTGAAAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569716.1
CDS CAA 90 bp ACCCCAGCCCGGGAGACAATGCGAGACTCTGGGAATGCCAGCTCATaGTTCAGAGAACCTAGTTTCCAGGTGGAACTGCAATTTAGTCCA +
Preference number: 6 (lower is better)
Translates to: TPARETMRDSGNASS*FREPSFQVELQFSP
Trigger: TGGACTAAATTGCAGTTCCACCTGGAAACTAGGTTCTCTGAACAATGAGCTGGCATTCCCAGAGTCTCGCATTGTCTCCCGGGCTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS GCA 72 bp CTTGTACACAACATATGGGTGTGGCTGCAGGTGGCTTaGTCGGGACTGCAGGTGGTTGCAACATCTTATTGT +
Preference number: 6 (lower is better)
Translates to: LVHNIWVWLQVA*SGLQVVATSYC
Trigger: ACAATAAGATGTTGCAACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCACACCCATATGTTGTGTACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CAA 72 bp ACTTGTACACAACATATGGGTGTGGCTGCAGGTGGCTaGCTCGGGACTGCAGGTGGTTGCAACATCTTATTG +
Preference number: 6 (lower is better)
Translates to: TCTQHMGVAAGG*LGTAGGCNILL
Trigger: CAATAAGATGTTGCAACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCACACCCATATGTTGTGTACAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CAA 90 bp ATCGCGCTACTGCACCCCAGCCCGGGAGACAATGCGAGACTCTGTTaGATATTCTTGGAGATAGGACCTGGAATAATACAGTCATCACTG +
Preference number: 6 (lower is better)
Translates to: IALLHPSPGDNARLC*IFLEIGPGIIQSSL
Trigger: CAGTGATGACTGTATTATTCCAGGTCCTATCTCCAAGAATATCAAACAGAGTCTCGCATTGTCTCCCGGGCTGGGGTGCAGTAGCGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563746.5
ENST00000565343.2
ENST00000647211.2
CDS TCA 72 bp CAAAAATCTGTCTTCCAGTTCCTCACGACTGACACGTaGCACTGCCTGGCGAGACTTCATTGTCCGTGTTGT +
Preference number: 6 (lower is better)
Translates to: QKSVFQFLTTDT*HCLARLHCPCC
Trigger: ACAACACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTGTCAGTCGTGAGGAACTGGAAGACAGATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000262135.9
ENST00000562230.5
ENST00000562588.5
ENST00000563746.5
ENST00000564374.5
ENST00000566096.5
ENST00000568653.7
ENST00000569716.1
ENST00000621565.5
ENST00000647211.2
ENST00000679110.1
ENST00000680193.1
ENST00000680907.1
CDS CCA 72 bp AAAAACTTGTACACAACATATGGGTGTGGCTGCAGGTaGCTTGCTCGGGACTGCAGGTGGTTGCAACATCTT +
Preference number: 6 (lower is better)
Translates to: KNLYTTYGCGCR*LARDCRWLQHL
Trigger: AAGATGTTGCAACCACCTGCAGTCCCGAGCAAGCCACCTGCAGCCACACCCATATGTTGTGTACAAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CAA 72 bp TATCTTTCACAGGCAAGTCTCCTGCAGTCTCATCAGTaGGACCAGACATGGCCTAGCTTCATGGCTGGGATA +
Preference number: 6 (lower is better)
Translates to: YLSQASLLQSHQ*DQTWPSFMAGI
Trigger: TATCCCAGCCATGAAGCTAGGCCATGTCTGGTCCAACTGATGAGACTGCAGGAGACTTGCCTGTGAAAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562588.5
CDS CAA 72 bp CTGCACCCCAGCCCGGGAGACAATGCGAGACTCTGTTaGATATTCTTGGAGATAGGACCTGGAATAATACAG +
Preference number: 6 (lower is better)
Translates to: LHPSPGDNARLC*IFLEIGPGIIQ
Trigger: CTGTATTATTCCAGGTCCTATCTCCAAGAATATCAAACAGAGTCTCGCATTGTCTCCCGGGCTGGGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563746.5
ENST00000565343.2
ENST00000647211.2
CDS CAA 90 bp CTGCACCCCAGCCCGGGAGACAATGCGAGACTCTGTTTGATATTCTaGGAGATAGGACCTGGAATAATACAGTCATCACTGTCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: LHPSPGDNARLCLIF*EIGPGIIQSSLSEA
Trigger: AGCTTCTGACAGTGATGACTGTATTATTCCAGGTCCTATCTCCAAGAATATCAAACAGAGTCTCGCATTGTCTCCCGGGCTGGGGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563746.5
ENST00000565343.2
ENST00000647211.2
CDS CAA 72 bp CACGTGACACTGCCTGGCGAGACTTCATTGTCCGTGTaGTTGAAGTTTCTTGTAACCCTCCCATTCCAAAGA +
Preference number: 6 (lower is better)
Translates to: HVTLPGETSLSV*LKFLVTLPFQR
Trigger: TCTTTGGAATGGGAGGGTTACAAGAAACTTCAACAACACGGACAATGAAGTCTCGCCAGGCAGTGTCACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262135.9
ENST00000562230.5
ENST00000562588.5
ENST00000563746.5
ENST00000564374.5
ENST00000566096.5
ENST00000568653.7
ENST00000569716.1
ENST00000621565.5
ENST00000647211.2
ENST00000679110.1
ENST00000680193.1
ENST00000680907.1
CDS CAA 72 bp TTGCTAGAGCTCACTGTCACACTCAGGTATCCTCCTTaGTTGACTCCCTGTGGACTAACTCTAAGCCATGTC +
Preference number: 6 (lower is better)
Translates to: LLELTVTLRYPP*LTPCGLTLSHV
Trigger: GACATGGCTTAGAGTTAGTCCACAGGGAGTCAACAAAGGAGGATACCTGAGTGTGACAGTGAGCTCTAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565343.2
CDS CAA 90 bp TGGTTGCACAAACTGAGCAACACTTTCACCCATACCATCGATATTTaGCTCAATGAGGTCCCTCCCTTCCTGAAACATGTCGGCAAGGTC +
Preference number: 6 (lower is better)
Translates to: WLHKLSNTFTHTIDI*LNEVPPFLKHVGKV
Trigger: GACCTTGCCGACATGTTTCAGGAAGGGAGGGACCTCATTGAGCAAAATATCGATGGTATGGGTGAAAGTGTTGCTCAGTTTGTGCAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564374.5
CDS TCA 72 bp CAACACTTTCACCCATACCATCGATATTTTGCTCAATaGGGTCCCTCCCTTCCTGAAACATGTCGGCAAGGT +
Preference number: 6 (lower is better)
Translates to: QHFHPYHRYFAQ*GPSLPETCRQG
Trigger: ACCTTGCCGACATGTTTCAGGAAGGGAGGGACCTCATTGAGCAAAATATCGATGGTATGGGTGAAAGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564374.5
CDS GCA 72 bp CATGTTTCTTGTCTTTTCCAGCTCTTGCACCGTTTCTaGATGAGTTGCTTGCAGCTCTCTCATAGAGCGTTC +
Preference number: 6 (lower is better)
Translates to: HVSCLFQLLHRF*MSCLQLSHRAF
Trigger: GAACGCTCTATGAGAGAGCTGCAAGCAACTCATGCAGAAACGGTGCAAGAGCTGGAAAAGACAAGAAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 72 bp TTGTCTGTTAAGTCAGACTTCAAGGCAGTCTCGAGCTaGGCAATCTGCACTTTCAGCTGTTGCTCCTTTAAC +
Preference number: 6 (lower is better)
Translates to: LSVKSDFKAVSS*AICTFSCCSFN
Trigger: GTTAAAGGAGCAACAGCTGAAAGTGCAGATTGCTCAGCTCGAGACTGCCTTGAAGTCTGACTTAACAGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000680907.1
CDS TCA 72 bp TTTCTTGTCTTTTCCAGCTCTTGCACCGTTTCTGCATaGGTTGCTTGCAGCTCTCTCATAGAGCGTTCTAGA +
Preference number: 6 (lower is better)
Translates to: FLVFSSSCTVSA*VACSSLIERSR
Trigger: TCTAGAACGCTCTATGAGAGAGCTGCAAGCAACTCATGCAGAAACGGTGCAAGAGCTGGAAAAGACAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 72 bp CAGGAGGAGGAGAAGTCTCATCACTCTGATGTGGCATaGTATCCACGAAAGATACCTTCTTATCTACAGGTG +
Preference number: 6 (lower is better)
Translates to: QEEEKSHHSDVA*YPRKIPSYLQV
Trigger: CACCTGTAGATAAGAAGGTATCTTTCGTGGATATCATGCCACATCAGAGTGATGAGACTTCTCCTCCTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CCA 72 bp CAACTCAAAGTAAAAGGCCTGCACATAGCATGCCAGTaGGTTGTTGAAGTCCACAGAGTAGAAACTGAACTG +
Preference number: 6 (lower is better)
Translates to: QLKVKGLHIACQ*VVEVHRVETEL
Trigger: CAGTTCAGTTTCTACTCTGTGGACTTCAACAACCCACTGGCATGCTATGTGCAGGCCTTTTACTTTGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS CAA 72 bp ACCCCAAAGCCTTTGCCCTTTCTCGATAAAGTCGAATaGCTTGATCCATGGGAACTCTTAATCGGAACCAGT +
Preference number: 6 (lower is better)
Translates to: TPKPLPFLDKVE*LDPWELLIGTS
Trigger: ACTGGTTCCGATTAAGAGTTCCCATGGATCAAGCAATTCGACTTTATCGAGAAAGGGCAAAGGCTTTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 72 bp ACTAGTGTGCTAACAGAGGATGCTGGAGGAAGTCTTTaGACAACTTCTGGCTCTTCGCTGCGAATGAAATTT +
Preference number: 6 (lower is better)
Translates to: TSVLTEDAGGSL*TTSGSSLRMKF
Trigger: AAATTTCATTCGCAGCGAAGAGCCAGAAGTTGTTCAAAGACTTCCTCCAGCATCCTCTGTTAGCACACTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000681587.1
CDS TCA 72 bp CTACTCCCTACTTTAAGAGACTCATGCTCTACCATGTaGACTAGCCAGGTGGTTGTACCCCCTACTTTAAAA +
Preference number: 6 (lower is better)
Translates to: LLPTLRDSCSTM*TSQVVVPPTLK
Trigger: TTTTAAAGTAGGGGGTACAACCACCTGGCTAGTTCACATGGTAGAGCATGAGTCTCTTAAAGTAGGGAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681587.1
CDS GCA 72 bp AAAACCCAACTCAAAGTAAAAGGCCTGCACATAGCATaGCAGTGGGTTGTTGAAGTCCACAGAGTAGAAACT +
Preference number: 6 (lower is better)
Translates to: KTQLKVKGLHIA*QWVVEVHRVET
Trigger: AGTTTCTACTCTGTGGACTTCAACAACCCACTGGCATGCTATGTGCAGGCCTTTTACTTTGAGTTGGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000568653.7
ENST00000679110.1
CDS CCA 72 bp TTGCCCTTTCTCGATAAAGTCGAATTGCTTGATCCATaGGAACTCTTAATCGGAACCAGTATTCCACTGTGC +
Preference number: 6 (lower is better)
Translates to: LPFLDKVELLDP*ELLIGTSIPLC
Trigger: GCACAGTGGAATACTGGTTCCGATTAAGAGTTCCCATGGATCAAGCAATTCGACTTTATCGAGAAAGGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CCA 72 bp TGTCACACTCAGGTATCCTCCTTTGTTGACTCCCTGTaGACTAACTCTAAGCCATGTCATCTAAAGTATCTC +
Preference number: 6 (lower is better)
Translates to: CHTQVSSFVDSL*TNSKPCHLKYL
Trigger: GAGATACTTTAGATGACATGGCTTAGAGTTAGTCCACAGGGAGTCAACAAAGGAGGATACCTGAGTGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565343.2
CDS TCA 72 bp CACTGCCTTCTTGTGAAACATCACTCTGATGTGGCATaGTATCCACGAAAGATACCTTCTTATCTACAGGTG +
Preference number: 6 (lower is better)
Translates to: HCLLVKHHSDVA*YPRKIPSYLQV
Trigger: CACCTGTAGATAAGAAGGTATCTTTCGTGGATATCATGCCACATCAGAGTGATGTTTCACAAGAAGGCAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000681587.1
CDS CCA 72 bp ACGCCCAGTGTTAATACGAGATTGTACATTATTGTATaGAGTTTGCCTGTAACCCTGGGTTTGAAGTTGCTG +
Preference number: 6 (lower is better)
Translates to: TPSVNTRLYIIV*SLPVTLGLKLL
Trigger: CAGCAACTTCAAACCCAGGGTTACAGGCAAACTCCATACAATAATGTACAATCTCGTATTAACACTGGGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262135.9
ENST00000562230.5
ENST00000563746.5
ENST00000564374.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000680907.1
CDS CCA 72 bp ATCTTCAGGAGGAGGAGAAGTCTCATCACTCTGATGTaGCATGATATCCACGAAAGATACCTTCTTATCTAC +
Preference number: 6 (lower is better)
Translates to: IFRRRRSLITLM*HDIHERYLLIY
Trigger: GTAGATAAGAAGGTATCTTTCGTGGATATCATGCCACATCAGAGTGATGAGACTTCTCCTCCTCCTGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CAA 90 bp ATGTTATATACCCCAAAGCCTTTGCCCTTTCTCGATAAAGTCGAATaGCTTGATCCATGGGAACTCTTAATCGGAACCAGTATTCCACTG +
Preference number: 6 (lower is better)
Translates to: MLYTPKPLPFLDKVE*LDPWELLIGTSIPL
Trigger: CAGTGGAATACTGGTTCCGATTAAGAGTTCCCATGGATCAAGCAATTCGACTTTATCGAGAAAGGGCAAAGGCTTTGGGGTATATAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 72 bp AGAGTTTGGAGTTCAGCAATTGTTGGTTGCACAAACTaGGCAACACTTTCACCCATACCATCGATATTTTGC +
Preference number: 6 (lower is better)
Translates to: RVWSSAIVGCTN*ATLSPIPSIFC
Trigger: GCAAAATATCGATGGTATGGGTGAAAGTGTTGCTCAGTTTGTGCAACCAACAATTGCTGAACTCCAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564374.5
CDS CAA 72 bp CTCTTAATCGGAACCAGTATTCCACTGTGCCAAAATTaGGGATGTCTCCTTTTGTTCCAATCAAACTTGCTG +
Preference number: 6 (lower is better)
Translates to: LLIGTSIPLCQN*GCLLLFQSNLL
Trigger: CAGCAAGTTTGATTGGAACAAAAGGAGACATCCCAAATTTTGGCACAGTGGAATACTGGTTCCGATTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CAA 90 bp ACCAGCATTTTCATTTGCTTTTCTACGCCCAGTGTTAATACGAGATaGTACATTATTGTATGGAGTTTGCCTGTAACCCTGGGTTTGAAG +
Preference number: 6 (lower is better)
Translates to: TSIFICFSTPSVNTR*YIIVWSLPVTLGLK
Trigger: CTTCAAACCCAGGGTTACAGGCAAACTCCATACAATAATGTACAATCTCGTATTAACACTGGGCGTAGAAAAGCAAATGAAAATGCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262135.9
ENST00000562230.5
ENST00000563746.5
ENST00000564374.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000680907.1
CDS CAA 90 bp GATATCAAGAAGATGAACATACTGTTCCACTTTGAGTTCATAATCTaGCTGCAAATTTTCCATCTTACGGGTCACTGCCTCAACCTCCAT +
Preference number: 6 (lower is better)
Translates to: DIKKMNILFHFEFII*LQIFHLTGHCLNLH
Trigger: ATGGAGGTTGAGGCAGTGACCCGTAAGATGGAAAATTTGCAGCAAGATTATGAACTCAAAGTGGAACAGTATGTTCATCTTCTTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 72 bp TCCAAGTCCATATTCATTGGCACTGGGAAATACATATaGTCATCAAACTGTGGATCATTGCTACTGGGAATG +
Preference number: 6 (lower is better)
Translates to: SKSIFIGTGKYI*SSNCGSLLLGM
Trigger: CATTCCCAGTAGCAATGATCCACAGTTTGATGATCATATGTATTTCCCAGTGCCAATGAATATGGACTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 72 bp GAAGTCTTTGAACAACTTCTGGCTCTTCGCTGCGAATaGAATTTCCTAAGTCTTCAGTTGTTATTGATCCAC +
Preference number: 6 (lower is better)
Translates to: EVFEQLLALRCE*NFLSLQLLLIH
Trigger: GTGGATCAATAACAACTGAAGACTTAGGAAATTTCATTCGCAGCGAAGAGCCAGAAGTTGTTCAAAGACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000681587.1
CDS GCA 72 bp GCTCATTGTTCAGAGAACCTAGTTTCCAGGTGGAACTaGAATTTAGTCCAATTGAATATGGCAGTTTTCACA +
Preference number: 6 (lower is better)
Translates to: AHCSENLVSRWN*NLVQLNMAVFT
Trigger: TGTGAAAACTGCCATATTCAATTGGACTAAATTGCAGTTCCACCTGGAAACTAGGTTCTCTGAACAATGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS CAA 72 bp AAGATGAACATACTGTTCCACTTTGAGTTCATAATCTaGCTGCAAATTTTCCATCTTACGGGTCACTGCCTC +
Preference number: 6 (lower is better)
Translates to: KMNILFHFEFII*LQIFHLTGHCL
Trigger: GAGGCAGTGACCCGTAAGATGGAAAATTTGCAGCAAGATTATGAACTCAAAGTGGAACAGTATGTTCATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS TCA 72 bp TTCAATATAACATGGATGGTGCCAGCAGGATGCTTTTaGTGGTCTGTTAACTCAAATATTCCTGAGATACAC +
Preference number: 6 (lower is better)
Translates to: FNITWMVPAGCF*WSVNSNIPEIH
Trigger: GTGTATCTCAGGAATATTTGAGTTAACAGACCATCAAAAGCATCCTGCTGGCACCATCCATGTTATATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CAA 90 bp TGTTCAGAGAACCTAGTTTCCAGGTGGAACTGCAATTTAGTCCAATaGAATATGGCAGTTTTCACACAACTGTTTGATATTCTTGGAGAT +
Preference number: 6 (lower is better)
Translates to: CSENLVSRWNCNLVQ*NMAVFTQLFDILGD
Trigger: ATCTCCAAGAATATCAAACAGTTGTGTGAAAACTGCCATATTCAATTGGACTAAATTGCAGTTCCACCTGGAAACTAGGTTCTCTGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS TCA 72 bp ATTAATTTCTATTTCTGGTATATGCTCTACCTCTGGTaGAATTTCCTTCCTATCTTCAGGAGGAGGAGAAGT +
Preference number: 6 (lower is better)
Translates to: INFYFWYMLYLW*NFLPIFRRRRS
Trigger: ACTTCTCCTCCTCCTGAAGATAGGAAGGAAATTTCACCAGAGGTAGAGCATATACCAGAAATAGAAATTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CCA 72 bp CTTAAGGTATCGATCCAAGTCCATATTCATTGGCACTaGGAAATACATATGATCATCAAACTGTGGATCATT +
Preference number: 6 (lower is better)
Translates to: LKVSIQVHIHWH*EIHMIIKLWII
Trigger: AATGATCCACAGTTTGATGATCATATGTATTTCCCAGTGCCAATGAATATGGACTTGGATCGATACCTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS CAA 72 bp TTTCTTATTTCTCCTCTGGCTTCTTCAAGTAAACTGTaGCCATATTTTGTAAACATGGGATGTGGAGTTTCT +
Preference number: 6 (lower is better)
Translates to: FLISPLASSSKL*PYFVNMGCGVS
Trigger: AGAAACTCCACATCCCATGTTTACAAAATATGGCAACAGTTTACTTGAAGAAGCCAGAGGAGAAATAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262135.9
ENST00000562230.5
ENST00000563746.5
ENST00000564374.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000680907.1
CDS CAA 72 bp AACCTAGTTTCCAGGTGGAACTGCAATTTAGTCCAATaGAATATGGCAGTTTTCACACAACTGTTTGATATT +
Preference number: 6 (lower is better)
Translates to: NLVSRWNCNLVQ*NMAVFTQLFDI
Trigger: AATATCAAACAGTTGTGTGAAAACTGCCATATTCAATTGGACTAAATTGCAGTTCCACCTGGAAACTAGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680193.1
CDS TCA 72 bp ATCACTATCATCAAAAACATAAAAACTCAGAGACTCTaGCTTAAGGTATCGATCCAAGTCCATATTCATTGG +
Preference number: 6 (lower is better)
Translates to: ITIIKNIKTQRL*LKVSIQVHIHW
Trigger: CCAATGAATATGGACTTGGATCGATACCTTAAGTCAGAGTCTCTGAGTTTTTATGTTTTTGATGATAGTGAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000262135.9
ENST00000563746.5
ENST00000564374.5
ENST00000565343.2
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
CDS GCA 72 bp TGTAATTGTTTCTCAAGACTGCAGCATTTTAAACGCTaGTCTTTAAGTTGCATGTTTAATTCATCCCCATTT +
Preference number: 6 (lower is better)
Translates to: CNCFSRLQHFKR*SLSCMFNSSPF
Trigger: AAATGGGGATGAATTAAACATGCAACTTAAAGAGCAGCGTTTAAAATGCTGCAGTCTTGAGAAACAATTACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000262135.9
ENST00000562230.5
ENST00000563746.5
ENST00000564374.5
ENST00000621565.5
ENST00000647211.2
ENST00000680193.1
ENST00000680907.1