RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000122484

Ensembl transcript IDs: ENST00000477322.1, ENST00000610020.2

Found 621 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGTGAGCAAGGCTCTGTGGGCGTGGGACCCACTGAACCAGGCATaGGAGGGGATTTCGTGGTCTGCCAGTTGCGAAGACTGTGGGAAA +
Preference number: 1 (lower is better)
Translates to: AVSKALWAWDPLNQA*EGISWSASCEDCGK
Trigger: TTTCCCACAGTCTTCGCAACTGGCAGACCACGAAATCCCCTCCCATGCCTGGTTCAGTGGGTCCCACGCCCACAGAGCCTTGCTCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp GGCGTGGGACCCACTGAACCAGGCATGGGAGGGGATTTCGTGGTCTaGCAGTTGCGAAGACTGTGGGAAAAGAGCAGTATTTGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: GVGPTEPGMGGDFVV*QLRRLWEKSSIWAG
Trigger: TCCTGCCCAAATACTGCTCTTTTCCCACAGTCTTCGCAACTGGCAGACCACGAAATCCCCTCCCATGCCTGGTTCAGTGGGTCCCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp AGCCCCACGCAGTCACTGCCCCACACCTTATCCTTCAGCTTGTGCTaGACAGGAGAGGAGTGGCTGGGATTCCTGACTAGGGCTTTGATG +
Preference number: 1 (lower is better)
Translates to: SPTQSLPHTLSFSLC*TGEEWLGFLTRALM
Trigger: CATCAAAGCCCTAGTCAGGAATCCCAGCCACTCCTCTCCTGTGCAGCACAAGCTGAAGGATAAGGTGTGGGGCAGTGACTGCGTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp CTGTGGGCGTGGGACCCACTGAACCAGGCATGGGAGGGGATTTCGTaGTCTGCCAGTTGCGAAGACTGTGGGAAAAGAGCAGTATTTGGG +
Preference number: 1 (lower is better)
Translates to: LWAWDPLNQAWEGIS*SASCEDCGKRAVFG
Trigger: CCCAAATACTGCTCTTTTCCCACAGTCTTCGCAACTGGCAGACCACGAAATCCCCTCCCATGCCTGGTTCAGTGGGTCCCACGCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp GACCCACTGAACCAGGCATGGGAGGGGATTTCGTGGTCTGCCAGTTaGGAAGACTGTGGGAAAAGAGCAGTATTTGGGCAGGAGTGTACC +
Preference number: 1 (lower is better)
Translates to: DPLNQAWEGISWSAS*EDCGKRAVFGQECT
Trigger: GGTACACTCCTGCCCAAATACTGCTCTTTTCCCACAGTCTTCGCAACTGGCAGACCACGAAATCCCCTCCCATGCCTGGTTCAGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp TGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGCCTaGCTAGGTACATTTCAGATGAAAGTCACCCCTGCTCCTTGCCCC +
Preference number: 1 (lower is better)
Translates to: WMAKSQEPVLTQTLA*LGTFQMKVTPAPCP
Trigger: GGGGCAAGGAGCAGGGGTGACTTTCATCTGAAATGTACCTAGGCAGGCCAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp CCCCTGGAGGTGGAATCTACAGAGACAGTAGGCCTTGCTGAGCTGTaGTGGGCTCTGCCCAGTTTGAGCTTCCCTGCTGCTTTGTTTACA +
Preference number: 1 (lower is better)
Translates to: PLEVESTETVGLAEL*WALPSLSFPAALFT
Trigger: TGTAAACAAAGCAGCAGGGAAGCTCAAACTGGGCAGAGCCCACCACAGCTCAGCAAGGCCTACTGTCTCTGTAGATTCCACCTCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp TGGCTGGGATTCCTGACTAGGGCTTTGATGAGAGTGCATGCACACTaGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGT +
Preference number: 1 (lower is better)
Translates to: WLGFLTRALMRVHAH*SMLLGLDGKVPGAS
Trigger: ACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGCACTCTCATCAAAGCCCTAGTCAGGAATCCCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp CTGCCCCACACCTTATCCTTCAGCTTGTGCTGCACAGGAGAGGAGTaGCTGGGATTCCTGACTAGGGCTTTGATGAGAGTGCATGCACAC +
Preference number: 1 (lower is better)
Translates to: LPHTLSFSLCCTGEE*LGFLTRALMRVHAH
Trigger: GTGTGCATGCACTCTCATCAAAGCCCTAGTCAGGAATCCCAGCCACTCCTCTCCTGTGCAGCACAAGCTGAAGGATAAGGTGTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp GGCATTTCTTTATCAGGAATCACACAGGCAGCCCCACGCAGTCACTaGCCCACACCTTATCCTTCAGCTTGTGCTGCACAGGAGAGGAGT +
Preference number: 1 (lower is better)
Translates to: GISLSGITQAAPRSH*PTPYPSACAAQERS
Trigger: ACTCCTCTCCTGTGCAGCACAAGCTGAAGGATAAGGTGTGGGGCAGTGACTGCGTGGGGCTGCCTGTGTGATTCCTGATAAAGAAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp CTGGAGGTGGAATCTACAGAGACAGTAGGCCTTGCTGAGCTGTGGTaGGCTCTGCCCAGTTTGAGCTTCCCTGCTGCTTTGTTTACACTG +
Preference number: 1 (lower is better)
Translates to: LEVESTETVGLAELW*ALPSLSFPAALFTL
Trigger: CAGTGTAAACAAAGCAGCAGGGAAGCTCAAACTGGGCAGAGCCCACCACAGCTCAGCAAGGCCTACTGTCTCTGTAGATTCCACCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp CCCAAAGCAGCTGGCCCTGTGGTGACTTGGTGGCAGTTGTCCACTTaGATCCTTAGTTTCTATACTGAGCTACTGGCTCCTCACCTGAGG +
Preference number: 1 (lower is better)
Translates to: PKAAGPVVTWWQLST*ILSFYTELLAPHLR
Trigger: CCTCAGGTGAGGAGCCAGTAGCTCAGTATAGAAACTAAGGATCCAAGTGGACAACTGCCACCAAGTCACCACAGGGCCAGCTGCTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp TGTTTGCCTGGGTGTCACCAGTGGAGGCTGCAGAACAGCAAATATTaGTGCCTGATCCTTACTGTGGAAGCTTCGTTCCAGTGGGGCATC +
Preference number: 1 (lower is better)
Translates to: CLPGCHQWRLQNSKY*CLILTVEASFQWGI
Trigger: GATGCCCCACTGGAACGAAGCTTCCACAGTAAGGATCAGGCAGCAATATTTGCTGTTCTGCAGCCTCCACTGGTGACACCCAGGCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp TTCGTGGTCTGCCAGTTGCGAAGACTGTGGGAAAAGAGCAGTATTTaGGCAGGAGTGTACCCCTCCTCCAGGTATAGTCACTCACGGCTT +
Preference number: 1 (lower is better)
Translates to: FVVCQLRRLWEKSSI*AGVYPSSRYSHSRL
Trigger: AAGCCGTGAGTGACTATACCTGGAGGAGGGGTACACTCCTGCCCAAATACTGCTCTTTTCCCACAGTCTTCGCAACTGGCAGACCACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp AGCAAATATTGCTGCCTGATCCTTACTGTGGAAGCTTCGTTCCAGTaGGGCATCTACCTCTCTGAGGTGTCTTTCGGCGCCTACTGGGAG +
Preference number: 1 (lower is better)
Translates to: SKYCCLILTVEASFQ*GIYLSEVSFGAYWE
Trigger: CTCCCAGTAGGCGCCGAAAGACACCTCAGAGAGGTAGATGCCCCACTGGAACGAAGCTTCCACAGTAAGGATCAGGCAGCAATATTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp CGGCTAACCCTCTGTGGGCTACACCCACTGTCCAGCCAGTCCCAGTaGGACGAACCAGGTACTTTAGTTGAAAATGCAGAAATCACCCAT +
Preference number: 1 (lower is better)
Translates to: RLTLCGLHPLSSQSQ*DEPGTLVENAEITH
Trigger: ATGGGTGATTTCTGCATTTTCAACTAAAGTACCTGGTTCGTCTCACTGGGACTGGCTGGACAGTGGGTGTAGCCCACAGAGGGTTAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp TCCTGCCGCCCTGTGAAGAAGGTGCCTTTCTTCCCCTTTGCCTTCTaGTATGATTGTAAGTTTCCTGAGGCTTTCCCAGCCATGTGGAAC +
Preference number: 1 (lower is better)
Translates to: SCRPVKKVPFFPFAF*YDCKFPEAFPAMWN
Trigger: GTTCCACATGGCTGGGAAAGCCTCAGGAAACTTACAATCATAGCAGAAGGCAAAGGGGAAGAAAGGCACCTTCTTCACAGGGCGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp CGTGCCCGGCCAGGGAGCTCTTTCAGATTGGCTCCTGTGTCTGTCTaGCATGCTTCTATCCTTTTGTTTTTGAGCACTTGCTTAGTTTCT +
Preference number: 1 (lower is better)
Translates to: RARPGSSFRLAPVSV*HASILLFLSTCLVS
Trigger: AGAAACTAAGCAAGTGCTCAAAAACAAAAGGATAGAAGCATGTCAGACAGACACAGGAGCCAATCTGAAAGAGCTCCCTGGCCGGGCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp TATATCCCTACCTCCTTGCCCACTAAGCTCCCCATTCCAGTGGGCTaGTTTCTGGTCCTTTTCCATGATTGGGCTTTAGTAGCTGTCATT +
Preference number: 1 (lower is better)
Translates to: YIPTSLPTKLPIPVG*FLVLFHDWALVAVI
Trigger: AATGACAGCTACTAAAGCCCAATCATGGAAAAGGACCAGAAAGCAGCCCACTGGAATGGGGAGCTTAGTGGGCAAGGAGGTAGGGATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp TGGCCTACTGCCATACAACCTGAACTGAAGTCCAGAAAGTTTAGGTaGCTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAA +
Preference number: 1 (lower is better)
Translates to: WPTAIQPELKSRKFR*LGHRANYWWSQEEK
Trigger: TTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACCTAAACTTTCTGGACTTCAGTTCAGGTTGTATGGCAGTAGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp TGGTTCTCCCCTGCTGTTCTCATGATAGTGAGTTCTCATGAGATCTaGTGGCTTTATAGAGGCTTTGCCCCACTTTGCTCTGCACTTCTC +
Preference number: 1 (lower is better)
Translates to: WFSPAVLMIVSSHEI*WLYRGFAPLCSALL
Trigger: GAGAAGTGCAGAGCAAAGTGGGGCAAAGCCTCTATAAAGCCATCAGATCTCATGAGAACTCACTATCATGAGAACAGCAGGGGAGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp TATTCCTTTCTGTTAGTTTTCCTTCTAATAGACAGGCCCCTTAGCTaGAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTT +
Preference number: 1 (lower is better)
Translates to: YSFLLVFLLIDRPLS*RSVGVCWRSTPDPV
Trigger: AACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTAAGGGGCCTGTCTATTAGAAGGAAAACTAACAGAAAGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp CCTGAACATGTTGCAAGGTGGCTGGATGGCTTTCTTCTGAAGTCATaGAATATTGTCCTTCACTTTGGTTATGACTGCAGAGGTGCTGGG +
Preference number: 1 (lower is better)
Translates to: PEHVARWLDGFLLKS*NIVLHFGYDCRGAG
Trigger: CCCAGCACCTCTGCAGTCATAACCAAAGTGAAGGACAATATTGCATGACTTCAGAAGAAAGCCATCCAGCCACCTTGCAACATGTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp TGCAAGCCCCAAGGGAGTCCAGAATTTCCTGAACATGTTGCAAGGTaGCTGGATGGCTTTCTTCTGAAGTCATGCAATATTGTCCTTCAC +
Preference number: 1 (lower is better)
Translates to: CKPQGSPEFPEHVAR*LDGFLLKSCNIVLH
Trigger: GTGAAGGACAATATTGCATGACTTCAGAAGAAAGCCATCCAGCCACCTTGCAACATGTTCAGGAAATTCTGGACTCCCTTGGGGCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp TGTGTCAACTTCAAAACATTACAGTACCTGAAGTGGACACTGCTTTaGCTGTATGACCCCAGTAAGGTAGGGTCAGATGGGCATCTAGGG +
Preference number: 1 (lower is better)
Translates to: CVNFKTLQYLKWTLL*LYDPSKVGSDGHLG
Trigger: CCCTAGATGCCCATCTGACCCTACCTTACTGGGGTCATACAGCCAAAGCAGTGTCCACTTCAGGTACTGTAATGTTTTGAAGTTGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp ACTTCCAATACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCTTaGCTTGTGCTGGTCTTCAAAGGAAATGCTTCCAGCTTTTGCCCA +
Preference number: 1 (lower is better)
Translates to: TSNTMLNRSGERGHP*LVLVFKGNASSFCP
Trigger: TGGGCAAAAGCTGGAAGCATTTCCTTTGAAGACCAGCACAAGGCAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp ATAGTGGGATTGCTGGGTCAAATGGTATTTCCAGTTCTAGATCCTTaGGGAGTCGTCACACTGACTTCCACAATGGTCGGACTAATTTGC +
Preference number: 1 (lower is better)
Translates to: IVGLLGQMVFPVLDP*GVVTLTSTMVGLIC
Trigger: GCAAATTAGTCCGACCATTGTGGAAGTCAGTGTGACGACTCCTCAAGGATCTAGAACTGGAAATACCATTTGACCCAGCAATCCCACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp CTCTCTCTCTCCAGAGCTCATTGGGCTTTTTGTTGCTTAGTTAGATaGGCCATAGACAAGGAGTTTGAGACCTGGGTTTTAGCAACTGCT +
Preference number: 1 (lower is better)
Translates to: LSLSRAHWAFCCLVR*AIDKEFETWVLATA
Trigger: AGCAGTTGCTAAAACCCAGGTCTCAAACTCCTTGTCTATGGCTCATCTAACTAAGCAACAAAAAGCCCAATGAGCTCTGGAGAGAGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp TTCTGTCAACTTGTCAAACTCATTCTCTGTCCAGTTTTGTTCCCTTaGTGGCAAGGAGTTGTGTTCCTTTGGAGGAGAAGAGGCATTCTG +
Preference number: 1 (lower is better)
Translates to: FCQLVKLILCPVLFP*WQGVVFLWRRRGIL
Trigger: CAGAATGCCTCTTCTCCTCCAAAGGAACACAACTCCTTGCCAGCAAGGGAACAAAACTGGACAGAGAATGAGTTTGACAAGTTGACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp TGTCAACTTGTCAAACTCATTCTCTGTCCAGTTTTGTTCCCTTGCTaGCAAGGAGTTGTGTTCCTTTGGAGGAGAAGAGGCATTCTGGTT +
Preference number: 1 (lower is better)
Translates to: CQLVKLILCPVLFPC*QGVVFLWRRRGILV
Trigger: AACCAGAATGCCTCTTCTCCTCCAAAGGAACACAACTCCTTGCCAGCAAGGGAACAAAACTGGACAGAGAATGAGTTTGACAAGTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp CAGAATTTCCTGAACATGTTGCAAGGTGGCTGGATGGCTTTCTTCTaGAGTCATGCAATATTGTCCTTCACTTTGGTTATGACTGCAGAG +
Preference number: 1 (lower is better)
Translates to: QNFLNMLQGGWMAFF*SHAILSFTLVMTAE
Trigger: CTCTGCAGTCATAACCAAAGTGAAGGACAATATTGCATGACTTCAGAAGAAAGCCATCCAGCCACCTTGCAACATGTTCAGGAAATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp ATGTCATCTGCAAACAGAGACAATTTGACTTCCTCTCTTCCTATTTaGATATGCTTTATTGCTTTCTCTTGCCTGATTGCCCTGGCCAGA +
Preference number: 1 (lower is better)
Translates to: MSSANRDNLTSSLPI*ICFIAFSCLIALAR
Trigger: TCTGGCCAGGGCAATCAGGCAAGAGAAAGCAATAAAGCATATTCAAATAGGAAGAGAGGAAGTCAAATTGTCTCTGTTTGCAGATGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp AAGAACCAGCTTCCACTTTCTTTAATTATGCAAACTAGAGCTAGGTaGCTGAGAACTTGCTTTTGGTCTGCAAGACATAGGGAGTTTTGC +
Preference number: 1 (lower is better)
Translates to: KNQLPLSLIMQTRAR*LRTCFWSARHREFC
Trigger: GCAAAACTCCCTATGTCTTGCAGACCAAAAGCAAGTTCTCAGTCACCTAGCTCTAGTTTGCATAATTAAAGAAAGTGGAAGCTGGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp AGCTCTTGTAAGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTaGTTGTCTGTAAAGGATTTTATTTCTCCTTCACTTAAGAAGCTT +
Preference number: 1 (lower is better)
Translates to: SSCKAGLVVTKSLSI*LSVKDFISPSLKKL
Trigger: AAGCTTCTTAAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCTTACAAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp AGAAATCACCCATCTTCTGTGTCCATCCTGCTGGGAGCTGTAGACTaGAGCTGTTCCTATTCGGCCATCTTCAATTTATTTTTATTTTTA +
Preference number: 1 (lower is better)
Translates to: RNHPSSVSILLGAVD*SCSYSAIFNLFLFL
Trigger: TAAAAATAAAAATAAATTGAAGATGGCCGAATAGGAACAGCTCCAGTCTACAGCTCCCAGCAGGATGGACACAGAAGATGGGTGATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp TTTCTTCTGAAGTCATGCAATATTGTCCTTCACTTTGGTTATGACTaGAGAGGTGCTGGGAAGCAAAATGAAAACTATCACCTTGAAGCA +
Preference number: 1 (lower is better)
Translates to: FLLKSCNIVLHFGYD*RGAGKQNENYHLEA
Trigger: TGCTTCAAGGTGATAGTTTTCATTTTGCTTCCCAGCACCTCTGCAGTCATAACCAAAGTGAAGGACAATATTGCATGACTTCAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 90 bp TCGATGTCTATTAGGTCTGCTTGGTCCAGAGCTGAGTTCAAGTCCTaGATATCTTTGTTAATTTTCTGTCTTGTTGATCTGTCTAATATT +
Preference number: 1 (lower is better)
Translates to: SMSIRSAWSRAEFKS*ISLLIFCLVDLSNI
Trigger: AATATTAGACAGATCAACAAGACAGAAAATTAACAAAGATATCCAGGACTTGAACTCAGCTCTGGACCAAGCAGACCTAATAGACATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp TCACCCATTAATATTGTGTGGGAGTCTAAATCTCTTTGTAGAACTTaGTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTT +
Preference number: 1 (lower is better)
Translates to: SPINIVWESKSLCRT*FMNLGAPVLGAYIF
Trigger: AAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAGAGATTTAGACTCCCACACAATATTAATGGGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 90 bp TTGGCTCTTTGTCTATTATTGGTATATAGGAATGCTTGTGATTTTTaGACACCGATTTTGTATCCTGAGACTTTGCTGAAGTTGCTTATC +
Preference number: 1 (lower is better)
Translates to: LALCLLLVYRNACDF*TPILYPETLLKLLI
Trigger: GATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCGGTGTGCAAAAATCACAAGCATTCCTATATACCAATAATAGACAAAGAGCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp AATATGAATGATAATGCTATGAACATTTGCCTACGAGTCTTGATGTaGACACATTTCCACTTCTCTTCTCATGGAATAGCAGGATCATAT +
Preference number: 1 (lower is better)
Translates to: NMNDNAMNICLRVLM*THFHFSSHGIAGSY
Trigger: ATATGATCCTGCTATTCCATGAGAAGAGAAGTGGAAATGTGTTCACATCAAGACTCGTAGGCAAATGTTCATAGCATTATCATTCATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 90 bp ATTGGAAAATATTTAGAAACCAAAATCCAGCACAGTACTTTGAACTaGATTCTGCTTCAGTCCTCCCAAACTAACATAAACTTGGCAGAA +
Preference number: 1 (lower is better)
Translates to: IGKYLETKIQHSTLN*ILLQSSQTNINLAE
Trigger: TTCTGCCAAGTTTATGTTAGTTTGGGAGGACTGAAGCAGAATTCAGTTCAAAGTACTGTGCTGGATTTTGGTTTCTAAATATTTTCCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGGGCAGGAGGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVGRRIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCTCCTGCC...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTCCCAGGTGAGGCGATaGCCCACCTTGCTTCGGCTA +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVSQVRR*PTLLRL
Trigger: TAGCCGAAGCAAGGTGGGGCATCGCCTCACCTGGGA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGGGGTATGTTGGTGCCTaGCTGCAGTCCCAGTTACTG +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVGYVGA*LQSQLL
Trigger: CAGTAACTGGGACTGCAGGCAGGCACCAACATACCC...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTCTTTCGGCGCCTACTaGGAGATGTCTCCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVSFGAY*EMSPSQ
Trigger: CTGACTGGGAGACATCTCCCAGTAGGCGCCGAAAGA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCTGAGGCAGGAGAAATaGTTCAACCCAGGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQLRQEK*FNPGGG
Trigger: TCCGCCTCCTGGGTTGAAGCATTTCTCCTGCCTCAG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGGGCATCTACCTCTCTaGGGTGTCTTTCGGCGCCTA +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLGHLPL*GVFRRL
Trigger: TAGGCGCCGAAAGACACCTCAGAGAGGTAGATGCCC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGCCCATGCCTATGTCCTaGATGGTATTGCCCAGGTTT +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVPMPMS*MVLPRF
Trigger: AAACCTGGGCAATACCATTCAGGACATAGGCATGGG...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGAGGTGTGAGCCCCTGTaGCTGGCTAGCTTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQRCEPL*LASFFF
Trigger: GAAAAAGAAGCTAGCCAGGCACAGGGGCTCACACCT...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp GGACCCACTGAACCAGGCATGGGAGGGGATTTCGTGGTCTGCCAGTaGCGAAGACTGTGGGAAAAGAGCAGTATTTGGGCAGGAGTGTAC +
Preference number: 2 (lower is better)
Translates to: GPTEPGMGGDFVVCQ*RRLWEKSSIWAGVY
Trigger: GTACACTCCTGCCCAAATACTGCTCTTTTCCCACAGTCTTCGCAACTGGCAGACCACGAAATCCCCTCCCATGCCTGGTTCAGTGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGAGGCAGGCCTGGTGGTaGCAAAATCTCTCAGCATTT +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQRQAWW*QNLSAF
Trigger: AAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCT...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCCAGTTCTAGATCCTTaGGGAGTCGTCACACTGACT +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQPVLDP*GVVTLT
Trigger: AGTCAGTGTGACGACTCCTCAAGGATCTAGAACTGG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGACTCCAGACCCTGTTTaGCTGGGTGTCACCAGTGGA +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLTPDPV*LGVTSG
Trigger: TCCACTGGTGACACCCAGGCAAACAGGGTCTGGAGT...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGTCATCCTCTGCAGTTaGGGACTGAAGGACTGGGAG +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLVILCS*GLKDWE
Trigger: CTCCCAGTCCTTCAGTCCCCAACTGCAGAGGATGAC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCCTACCTTTGGTCTCTaGTGTTGGTGTCCTATGGAT +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQPTFGL*CWCPMD
Trigger: ATCCATAGGACACCAACATCAGAGACCAAAGGTAGG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGTCACCAGTGGAGGCTaGAGAACAGCAAATATTGCT +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQVTSGG*RTANIA
Trigger: AGCAATATTTGCTGTTCTGCAGCCTCCACTGGTGAC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGCGACGCATTAGAACATaGTCCTTTAGCTTGGAGAAG +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVRRIRT*SFSLEK
Trigger: CTTCTCCAAGCTAAAGGAGCATGTTCTAATGCGTCG...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGGTTTTGTTCCCTTGCTaGCAAGGAGTTGTGTTCCTT +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVVLFPC*QGVVFL
Trigger: AAGGAACACAACTCCTTGCCAGCAAGGGAACAAAAC...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGCAATCAGCCCATCTTaGCTTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLAISPS*LPKVLG
Trigger: TCCCAGCACTTTGGGAAGCCAAGATGGGCTGATTGC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCCTGTGGTGACTTGGTaGCAGTTGTCCACTTGGATC +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLPVVTW*QLSTWI
Trigger: GATCCAAGTGGACAACTGCCACCAAGTCACCACAGG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCATTTGGCATGTTTTTaGAGTGGCTGGTACTGGTTG +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQHLACF*SGWYWL
Trigger: CAACCAGTACCAGCCACTGCAAAAACATGCCAAATG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCAGCTTTGTTCTTCTTaGCCAGGATTGTCTTGGCTA +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQQLCSS*PGLSWL
Trigger: TAGCCAAGACAATCCTGGGCAAGAAGAACAAAGCTG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGGTTTTCCAAAGTGGCTaGACCATTTTACATTCCCAC +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVVFQSG*TILHSH
Trigger: GTGGGAATGTAAAATGGTGCAGCCACTTTGGAAAAC...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGTGAGCCCCTGTGCCTaGCTAGCTTCTTTTTCTCTT +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLVSPCA*LASFSL
Trigger: AAGAGAAAAAGAAGCTAGCCAGGCACAGGGGCTCAC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGAGTCCAGAAAGTTCTaGGATTTTCCTGTTTTGGAC +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQESRKF*DFPVLD
Trigger: GTCCAAAACAGGAAAATCTCAGAACTTTCTGGACTC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCTACGAGTCTTGATGTaGACACATTTCCACTTCTCT +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQLRVLM*THFHFS
Trigger: AGAGAAGTGGAAATGTGTTCACATCAAGACTCGTAG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGATAAGCTTTTTGATATaGTGCTGGATTCGGTTTGCC +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVISFLI*CWIRFA
Trigger: GGCAAACCGAATCCAGCAGCATATCAAAAAGCTTAT...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGCTGTTTTTGTACCAGTaGCATGCTGTTTTGGTTACT +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVLFLYQ*HAVLVT
Trigger: AGTAACCAAAACAGCATGGCACTGGTACAAAAACAG...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCCAGTTACAGTTTTCTaGATATGGCTAGCCCGTTTT +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQPVTVF*IWLARF
Trigger: AAAACGGGCTAGCCATATGCAGAAAACTGTAACTGG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGAGGCATTCTGGTTTTTaGAATTTTCAGCCTTTCTGG +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVRHSGF*NFQPFW
Trigger: CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCT...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGGCATGTTTTTGCAGTaGCTGGTACTGGTTGTTCCT +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLGMFLQ*LVLVVP
Trigger: AGGAACAACCAGTACCAGCCACTGCAAAAACATGCC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTGTGGTTTTTGCCGTTaGTTCTGTTTATGTGATGGA +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVCGFCR*FCLCDG
Trigger: TCCATCACATAAACAGAACCAACGGCAAAAACCACA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAGGGCGTGGGACCCACTaGACCAGGCATGGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIGRGTH*TRHGRG
Trigger: TCCCCTCCCATGCCTGGTTCAGTGGGTCCCACGCCC...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTTCTTTTGCATTTGCTaGAGAGTGCTTTACTTCCAA +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVFFCIC*RVLYFQ
Trigger: TTGGAAGTAAAGCACTCTTCAGCAAATGCAAAAGAA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGTTTGAGCTTCCCTGCTaGTTTGTTTACACTGTGAGC +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLFELPC*FVYTVS
Trigger: GCTCACAGTGTAAACAAAGCAGCAGGGAAGCTCAAA...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCTTGGCTTCCGAAAGTaGAGGGATTTCAGATGTGAA +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLLGFRK*RDFRCE
Trigger: TTCACATCTGAAATCCCTGCACTTTCGGAAGCCAAG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGATGGTCTTTACCATTTaGCATGTTTTTGCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQMVFTI*HVFAVA
Trigger: AGCCACTGCAAAAACATGCCAAATGGTAAAGACCAT...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTATATTCTGTTGATTTaGGGTGGAGAGTTCTGTCGA +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQYILLI*GGEFCR
Trigger: TCGACAGAACTCTCCACCCCAAATCAACAGAATATA...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGATCTATAAATCAGTTTaGGCAACAAGGCCATTGTCA +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVIYKSV*ATRPLS
Trigger: TGACAATGGCCTTGTTGCCCAAACTGATTTATAGAT...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGACAGTAGGCCTTGCTaGGCTGTGGTGGGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: STCLVSGTTRCSRLILHFDSRPC*AVVGSA
Trigger: GGCAGAGCCCACCACAGCTCAGCAAGGCCTACTGTC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGATCGAATTGGCTATTaGAGCTTGTGTATGCTTCAC +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLDRIGY*SLCMLH
Trigger: GTGAAGCATACACAAGCTTCAATAGCCAATTCGATC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTTGCCAGTATTTTATTaGGGATTTTCGCATCGATGT +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQLPVFY*GFSHRC
Trigger: ACATCGATGCGAAAATCCTCAATAAAATACTGGCAA...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCAAACAGAGACAATTTaGCTTCCTCTCTTCCTATTT +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQQTETI*LPLFLF
Trigger: AAATAGGAAGAGAGGAAGTCAAATTGTCTCTGTTTG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGCATTTGCTGAAGAGTaGTTTACTTCCAATTATGTG +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQAFAEE*FTSNYV
Trigger: CACATAATTGGAAGTAAAGCACTCTTCAGCAAATGC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTATCTCCTTCAGTTCTaGTCTGATCTTAGTTATTTC +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVYLLQF*SDLSYF
Trigger: GAAATAACTAAGATCAGAGCAGAACTGAAGGAGATA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTACAATCATGTCATCTaGAAACAGAGACAATTTGAC +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVYNHVI*KQRQFD
Trigger: GTCAAATTGTCTCTGTTTGCAGATGACATGATTGTA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCATGGTATACATGTaGCACATTTTCTTAATCCAG +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQSMVYM*HIFLIQ
Trigger: CTGGATTAAGAAAATGTGGCACATGTATACCATGGA...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGTTCTGGGTTACATGTaGAGAACATGTAGTTTTGTT +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQVLGYM*RTCSFV
Trigger: AACAAAACTACATGTTCTGCACATGTAACCCAGAAC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGCCCATTAATATTGTGTaGGAGTCTAAATCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVPINIV*ESKSLC
Trigger: ACAAAGAGATTTAGACTCCCACACAATATTAATGGG...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGATTGAGATAATCATGTaGTTTTTGCCGTTGGTTCTG +
Preference number: 2 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQIEIIM*FLPLVL
Trigger: CAGAACCAACGGCAAAAACCACATGATTATCTCAAT...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp CTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTCCTaGCCCACTAAGCTCCCCATTCCAGTGGGCTGCTTTCTGGTCCTT +
Preference number: 2 (lower is better)
Translates to: LITGGAKKRNYIPTS*PTKLPIPVGCFLVL
Trigger: AAGGACCAGAAAGCAGCCCACTGGAATGGGGAGCTTAGTGGGCAAGGAGGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGCTCAAGCAGTCCTCCTaGCTCTGCCTCCAAAGTGCT +
Preference number: 2 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWLKQSS*LCLQSA
Trigger: AGCACTTTGGAGGCAGAGGCAGGAGGACTGCTTGAG...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGTGGCAGTTGTCCACTTaGATCCTTAGTTTCTATACT +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLWQLST*ILSFYT
Trigger: AGTATAGAAACTAAGGATCCAAGTGGACAACTGCCA...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCCCCATTCCAGTGGGCTaGTTTCTGGTCCTTTTCCAT +
Preference number: 2 (lower is better)
Translates to: WATELITGGAKKRNYIPTPIPVG*FLVLFH
Trigger: ATGGAAAAGGACCAGAAAGCAGCCCACTGGAATGGG...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTCTTGCTGAGCTGTGGTaGGCTCTGCCCAGTTTGAGC +
Preference number: 2 (lower is better)
Translates to: STCLVSGTTRCSRLILHFLAELW*ALPSLS
Trigger: GCTCAAACTGGGCAGAGCCCACCACAGCTCAGCAAG...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGGAAGCTTCGTTCCAGTaGGGCATCTACCTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWEASFQ*GIYLSE
Trigger: CTCAGAGAGGTAGATGCCCCACTGGAACGAAGCTTC...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGTCTGCAGTTGGGGACTaGAGGACTGGGAGATGGGAG +
Preference number: 2 (lower is better)
Translates to: AALNSFSFISTLVNLTIMSAVGD*RTGRWE
Trigger: CTCCCATCTCCCAGTCCTTCAGTCCCCAACTGCAGA...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCACAGGCCCTGGTGTGTaGTGTTACCCTCCCTGTGTC +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFTGPGV*CYPPCV
Trigger: GACACAGGGAGGGTAACATCACACACCAGGGCCTGT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAGGGGAGGTCATCCTCTaGAGTTGGGGACTGAAGGAC +
Preference number: 2 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIGEVIL*SWGLKD
Trigger: GTCCTTCAGTCCCCAACTGCAGAGGATGACCTCCCC...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGTTTCTGCTTTCCATTTaGTTGGTAAATCTTCCTACA +
Preference number: 2 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLFLLSI*LVNLPT
Trigger: TGTAGGAAGATTTACCAAGCAAATGGAAAGCAGAAA...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTTGCCCAGGCTGGAGTaGACTGGCACAGTCACAGCT +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFLPRLE*TGTVTA
Trigger: AGCTGTGACTGTGCCAGTGCACTCCAGCCTGGGCAA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCAGACCCTGTTTGCCTaGGTGTCACCAGTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFQTLFA*VSPVEA
Trigger: AGCCTCCACTGGTGACACCCAGGCAAACAGGGTCTG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp GAAGCCTACTTCTGTCAACTTGTCAAACTCATTCTCTGTCCAGTTTaGTTCCCTTGCTGGCAAGGAGTTGTGTTCCTTTGGAGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: EAYFCQLVKLILCPV*FPCWQGVVFLWRRR
Trigger: TCTTCTCCTCCAAAGGAACACAACTCCTTGCCAGCAAGGGAACAAAACTGGACAGAGAATGAGTTTGACAAGTTGACAGAAGTAGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTCTGGTCCTTTTCCATaGTTGGGCTTTAGTAGCTGT +
Preference number: 2 (lower is better)
Translates to: GDWATELITGGAKKRNYISGPFP*LGFSSC
Trigger: ACAGCTACTAAAGCCCAATCATGGAAAAGGACCAGA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCCTTTGTGGGTAACCTaGCCTTTCTCTCTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFPLWVT*PFSLAA
Trigger: GGCAGCCAGAGAGAAAGGTCAGGTTACCCACAAAGG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTCAGTCCTCCTGCCTCTaGCTCCAAAGTGCTAGAACT +
Preference number: 2 (lower is better)
Translates to: STCLVSGTTRCSRLILHFQSSCL*LQSART
Trigger: AGTTCTAGCACTTTGGAGGCAGAGGCAGGAGGACTG...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGCCTGGGTGTCACCAGTaGAGGCTGCAGAACAGCAAA +
Preference number: 2 (lower is better)
Translates to: AALNSFSFISTLVNLTIMPGCHQ*RLQNSK
Trigger: TTTGCTGTTCTGCAGCCTCCACTGGTGACACCCAGG...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCAGGCTCTAGTGCGGTaGTGTGATCTTGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFQALVR*CDLGSL
Trigger: CAGTGAGCCAAGATCACACCACCGCACTAGAGCCTG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp GCATCCTTGCCTTGTGCTGGTCTTCAAAGGAAATGCTTCCAGCTTTaGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATAAC +
Preference number: 2 (lower is better)
Translates to: ASLPCAGLQRKCFQL*PIQYAIGCGFVINN
Trigger: GTTATTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCATTTCCTTTGAAGACCAGCACAAGGCAAGGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp AATAGTGGGATTGCTGGGTCAAATGGTATTTCCAGTTCTAGATCCTaGAGGAGTCGTCACACTGACTTCCACAATGGTCGGACTAATTTG +
Preference number: 2 (lower is better)
Translates to: NSGIAGSNGISSSRS*RSRHTDFHNGRTNL
Trigger: CAAATTAGTCCGACCATTGTGGAAGTCAGTGTGACGACTCCTCAAGGATCTAGAACTGGAAATACCATTTGACCCAGCAATCCCACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTCCAGCCAGTCCCAGTaGGACGAACCAGGTACTTTA +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFSSQSQ*DEPGTL
Trigger: TAAAGTACCTGGTTCGTCTCACTGGGACTGGCTGGA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGTGCTGGGAGAACCACTaGTCTCTTCAGAGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: AALNSFSFISTLVNLTIMCWENH*SLQSCQ
Trigger: CTGACAGCTCTGAAGAGAGCAGTGGTTCTCCCAGCA...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGAAAAGAGCAGTATTTaGGCAGGAGTGTACCCCTCC +
Preference number: 2 (lower is better)
Translates to: STCLVSGTTRCSRLILHFEKSSI*AGVYPS
Trigger: GGAGGGGTACACTCCTGCCCAAATACTGCTCTTTTC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp GGTCATCCTCTGCAGTTGGGGACTGAAGGACTGGGAGATGGGAGATaGAAACTTAAAGAGGTAAAGGTATGTCTTGGAATAAAACTAGTT +
Preference number: 2 (lower is better)
Translates to: GHPLQLGTEGLGDGR*KLKEVKVCLGIKLV
Trigger: AACTAGTTTTATTCCAAGACATACCTTTACCTCTTTAAGTTTCAATCTCCCATCTCCCAGTCCTTCAGTCCCCAACTGCAGAGGATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp GAGAAGTTTGTTATTACCGACCTTCTGAAGCCTACTTCTGTCAACTaGTCAAACTCATTCTCTGTCCAGTTTTGTTCCCTTGCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: EKFVITDLLKPTSVN*SNSFSVQFCSLAGK
Trigger: CTTGCCAGCAAGGGAACAAAACTGGACAGAGAATGAGTTTGACAAGTTGACAGAAGTAGGCTTCAGAAGGTCGGTAATAACAAACTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGCATGCCCAGCCCTCTTaGATGTTTTATAGTTTTCGT +
Preference number: 2 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWHAQPS*MFYSFR
Trigger: ACGAAAACTATAAAACATTCAAGAGGGCTGGGCATG...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATGGTCAGGGACCCACTTaGGGAGGCAGTCTGTCTATT +
Preference number: 2 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYGQGPT*GGSLSI
Trigger: AATAGACAGACTGCCTCCTCAAGTGGGTCCCTGACC...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATGGTCCGCTGTTAATCTaGTGGGCTTCCCTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYGPLLI*WASLCG
Trigger: CCCACAAAGGGAAGCCCATCAGATTAACAGCGGACC...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATCGTGGTCTGCCAGTTaGGAAGACTGTGGGAAAAGA +
Preference number: 2 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYISWSAS*EDCGKR
Trigger: TCTTTTCCCACAGTCTTCGCAACTGGCAGACCACGA...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCATGTTGAACCAGCCTTaGATCCCAGGGAAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFMLNQP*IPGKKL
Trigger: CAGCTTCTTCCCTGGGATGCAAGGCTGGTTCAACAT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGTGGAGATGGCATTTTaGTCTGTTGTCCAGTCTGGT +
Preference number: 2 (lower is better)
Translates to: STCLVSGTTRCSRLILHFVEMAF*SVVQSG
Trigger: ACCAGACTGGACAACAGAGCAAAATGCCATCTCCAC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCCAAAAGATCCCTTGTaGCCATCTGCAGGCAATCCA +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFPKDPL*PSAGNP
Trigger: TGGATTGCCTGCAGATGGGCACAAGGGATCTTTTGG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTTTAAAGCATTTCCTTaGGTCCAGAAAGTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: GDWATELITGGAKKRNYIFKAFP*VQKVLR
Trigger: TCTCAGAACTTTCTGGACTCAAGGAAATGCTTTAAA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGTAGAACTTGCTTTATaGATCTGGGTGCTCCTGTAT +
Preference number: 2 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKVELAL*IWVLLY
Trigger: ATACAGGAGCACCCAGATTCATAAAGCAAGTTCTAC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGCTCCTGTGTCTGTCTaGCATGCTTCTATCCTTTTG +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFAPVSV*HASILL
Trigger: CAAAAGGATAGAAGCATGTCAGACAGACACAGGAGC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTCCAAGAGTATTTTCTTaGCCTTCCAGTAAAGCTCCC +
Preference number: 2 (lower is better)
Translates to: STCLVSGTTRCSRLILHFPRVFS*PSSKAP
Trigger: GGGAGCTTTACTGGAAGGCCAAGAAAATACTCTTGG...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGGAGAAGAGGCATTCTaGTTTTTGGAATTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKGEEAF*FLEFSA
Trigger: GGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGGGAGTTGTGTTCCTTTaGAGGAGAAGAGGCATTCTG +
Preference number: 2 (lower is better)
Translates to: AALNSFSFISTLVNLTIMGVVFL*RRRGIL
Trigger: CAGAATGCCTCTTCTCCTCCAAAGGAACACAACTCC...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTGCAAGGTGGCTGGATaGCTTTCTTCTGAAGTCATG +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFCKVAG*LSSEVM
Trigger: CATGACTTCAGAAGAAAGCCATCCAGCCACCTTGCA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTGGACTCTGTTCCACTaGTCTGTATGCCTATCTTTA +
Preference number: 2 (lower is better)
Translates to: STCLVSGTTRCSRLILHFWTLFH*SVCLSL
Trigger: TAAAGATAGGCATACAGATCAGTGGAACAGAGTCCA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATCAGTGGGCTGCTTTCTaGTCCTTTTCCATGATTGGG +
Preference number: 2 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYQWAAF*SFSMIG
Trigger: CCCAATCATGGAAAAGGACCAGAAAGCAGCCCACTG...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAGGTTTTACCTACCTTTaGTCTCTGATGTTGGTGTCC +
Preference number: 2 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIGFTYL*SLMLVS
Trigger: GGACACCAACATCAGAGACCAAAGGTAGGTAAAACC...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp TCTTGTAAGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTaGTCTGTAAAGGATTTTATTTCTCCTTCACTTAAGAAGCTTAGT +
Preference number: 2 (lower is better)
Translates to: SCKAGLVVTKSLSIC*SVKDFISPSLKKLS
Trigger: ACTAAGCTTCTTAAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCTTACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp TTTTGGAATAAGTGTGATGTGGTGCTGACAAGAATGTATATTCTGTaGATTTGGGGTGGAGAGTTCTGTCGATGTCTATTAGGTCTGCTT +
Preference number: 2 (lower is better)
Translates to: FWNKCDVVLTRMYIL*IWGGEFCRCLLGLL
Trigger: AAGCAGACCTAATAGACATCGACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTGTCAGCACCACATCACACTTATTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCTCACTGATGGGTCTTaGCTGTTTATTCAATTTGCC +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFLTDGS*LFIQFA
Trigger: GGCAAATTGAATAAACAGTCAAGACCCATCAGTGAG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGTTAGCTGTTCTTGTTaGATTGATCCCTTTACCATT +
Preference number: 2 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKVSCSC*IDPFTI
Trigger: AATGGTAAAGGGATCAATTCAACAAGAACAGCTAAC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTAGCATGAAAGGCTGTTaGATTTTGTTGAAGGCCTTT +
Preference number: 2 (lower is better)
Translates to: STCLVSGTTRCSRLILHFSMKGC*ILLKAF
Trigger: AAAGGCCTTCAACAAAATTCAACAGCCTTTCATGCT...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATACCACCAGACCATCATaGCGGCTAGAATTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYTTRPS*RLEFQK
Trigger: TTTCTGGAATTCTAGCCGCCATGATGGTCTGGTGGT...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGCACAGAGCTAATTACTaGTGGAGCCAAGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: AALNSFSFISTLVNLTIMHRANY*WSQEEK
Trigger: TTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTG...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAAATTTTCAGCCTTTCTaGTCTGGTTTCTCCCCATCT +
Preference number: 2 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYINFQPF*SGFSPS
Trigger: AGATGGGGAGAAACCAGACCAGAAAGGCTGAAAATT...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAAATTTGATTGCATTGTaGTCTGAGACGGTTTGTTGT +
Preference number: 2 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKNLIAL*SETVCC
Trigger: ACAACAAACCGTCTCAGACCACAATGCAATCAAATT...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCAGCTTAAGGAGATTTTaGGATGAGACGATGGGGTTT +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFSLRRF*DETMGF
Trigger: AAACCCCATCGTCTCATCCCAAAATCTCCTTAAGCT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATACATCCTTTTATTCTaGGCCTATGTGTGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIYILLF*AYVCLC
Trigger: GCAAAGACACACATAGGCTCAGAATAAAAGGATGTA...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGATTCTTCCTATCCATaGGCATGGAATGTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFDSSYP*AWNVFP
Trigger: TGGAAAAACATTCCATGCTCATGGATAGGAAGAATC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCCTAGCACTATTTGTTaGAAAGACCATCTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFPSTIC*KDHLFS
Trigger: GGAGAAAAGATGGTCTTTTCAACAAATAGTGCTAGG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTCCTCAACTGCTAACTTaGCTACCTGATAAACATTTT +
Preference number: 2 (lower is better)
Translates to: STCLVSGTTRCSRLILHFPQLLT*LPDKHF
Trigger: AAAATGTTTATCAGGTAGGCAAGTTAGCAGTTGAGG...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATCAGTTTGAGCTTCCCTaGTGCTTTGTTTACACTGTG +
Preference number: 2 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYQFELP*CFVYTV
Trigger: CACAGTGTAAACAAAGCAGCAGGGAAGCTCAAACTG...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCAATGCTTCCAGCTTTTaGCCATTCAGTATGCTATTG +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFNASSF*PFSMLL
Trigger: CAATAGCATACTGAATGGGCAAAAGCTGGAAGCATT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGTCCTTTTCCATGATTaGGCTTTAGTAGCTGTCATT +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFVLFHD*ALVAVI
Trigger: AATGACAGCTACTAAAGCCCAATCATGGAAAAGGAC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCATGCTCCTTTAGCTTaGAGAAGTTTGTTATTACCG +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFHAPLA*RSLLLP
Trigger: CGGTAATAACAAACTTCTCCAAGCTAAAGGAGCATG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGAATTCCAGAAACGGTaGATAGAAGTTCATCTTCTA +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFEFQKR*IEVHLL
Trigger: TAGAAGATGAACTTCTATTCACCGTTTCTGGAATTC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTTGATCTTCAGTTACTaGTATCCTTTCTTCCACTTG +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFLIFSY*YPFFHL
Trigger: CAAGTGGAAGAAAGGATATCAGTAACTGAAGATCAA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR GCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATTCTGGAGAAGCTGTCTaGTGCCTTTTGTTCAGATAT +
Preference number: 2 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYSGEAV*CLLFRY
Trigger: ATATCTGAACAAAAGGCAGCAGACAGCTTCTCCAGA...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCAGAGCTAATTACTGGTaGAGCCAAGAAGAGAAATTA +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFRANYW*SQEEKL
Trigger: TAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGCTGAGTTCAAGTCCTaGATATCTTTGTTAATTTTC +
Preference number: 2 (lower is better)
Translates to: STCLVSGTTRCSRLILHFAEFKS*ISLLIF
Trigger: GAAAATTAACAAAGATATCCAGGACTTGAACTCAGC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp CTATTATTGGTATATAGGAATGCTTGTGATTTTTGCACACCGATTTaGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGCTTAAGGAGA +
Preference number: 2 (lower is better)
Translates to: LLLVYRNACDFCTPI*YPETLLKLLISLRR
Trigger: TCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCGGTGTGCAAAAATCACAAGCATTCCTATATACCAATAATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 90 bp ATGCCTTTTCTGGACTGTAAATGGAAACATACCATATGTGGGATATaGCATCAGACTTCTTTCACTAAGCATAATGTTTTGAGATGCATC +
Preference number: 2 (lower is better)
Translates to: MPFLDCKWKHTICGI*HQTSFTKHNVLRCI
Trigger: GATGCATCTCAAAACATTATGCTTAGTGAAAGAAGTCTGATGCAATATCCCACATATGGTATGTTTCCATTTACAGTCCAGAAAAGGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCTTGGTTATTCTTGTTaGAGTAATGATTCTCCTCTA +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFLGYSC*SNDSPL
Trigger: TAGAGGAGAATCATTACTCCAACAAGAATAACCAAG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGCTTTTGAATTTGTTTaGTCTTGCTTCTCTAGTTCT +
Preference number: 2 (lower is better)
Translates to: LGKLTADIVLNGERLSTFAFEFV*SCFSSS
Trigger: AGAACTAGAGAAGCAAGACCAAACAAATTCAAAAGC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp AAGGCTCTGTGGGCGTGGGACCCACTGAACCAGGCATaGGAGGGGATTTCGTGGTCTGCCAGTTGCGAAGAC +
Preference number: 3 (lower is better)
Translates to: KALWAWDPLNQA*EGISWSASCED
Trigger: GTCTTCGCAACTGGCAGACCACGAAATCCCCTCCCATGCCTGGTTCAGTGGGTCCCACGCCCACAGAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTGGGCTCTGCCCAGTTaGAGCTTCCCTGCTGCTTTG +
Preference number: 3 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVWALPS*SFPAAL
Trigger: CAAAGCAGCAGGGAAGCTCAAACTGGGCAGAGCCCA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp GAGCTCAAGTGGTCCACCCTCCTTGGCTTCCGAAAGTaGAGGGATTTCAGATGTGAACCACCTCCCCGGGCC +
Preference number: 3 (lower is better)
Translates to: ELKWSTLLGFRK*RDFRCEPPPRA
Trigger: GGCCCGGGGAGGTGGTTCACATCTGAAATCCCTGCACTTTCGGAAGCCAAGGAGGGTGGACCACTTGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp GACAGGCCCCTTAGCTGCAGGTCTGTTGGAGTTTGCTaGAGGTCCACTCCAGACCCTGTTTGCCTGGGTGTC +
Preference number: 3 (lower is better)
Translates to: DRPLSCRSVGVC*RSTPDPVCLGV
Trigger: GACACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTAAGGGGCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTGGCCCTGTGGTGACTaGGTGGCAGTTGTCCACTTG +
Preference number: 3 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQWPCGD*VAVVHL
Trigger: CAAGTGGACAACTGCCACCAAGTCACCACAGGGCCA...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp GTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTaGCTGGGTGTCACCAGTGGAGGCTGCAGAACAGCA +
Preference number: 3 (lower is better)
Translates to: VGVCWRSTPDPV*LGVTSGGCRTA
Trigger: TGCTGTTCTGCAGCCTCCACTGGTGACACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGGTCATCCTCTGCAGTaGGGGACTGAAGGACTGGGA +
Preference number: 3 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLGHPLQ*GTEGLG
Trigger: TCCCAGTCCTTCAGTCCCCAACTGCAGAGGATGACC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp TGTGGAAGCTTCGTTCCAGTGGGGCATCTACCTCTCTaGGGTGTCTTTCGGCGCCTACTGGGAGATGTCTCC +
Preference number: 3 (lower is better)
Translates to: CGSFVPVGHLPL*GVFRRLLGDVS
Trigger: GGAGACATCTCCCAGTAGGCGCCGAAAGACACCTCAGAGAGGTAGATGCCCCACTGGAACGAAGCTTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp ATAGACAGGCCCCTTAGCTGCAGGTCTGTTGGAGTTTaGTGGAGGTCCACTCCAGACCCTGTTTGCCTGGGT +
Preference number: 3 (lower is better)
Translates to: IDRPLSCRSVGV*WRSTPDPVCLG
Trigger: ACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTAAGGGGCCTGTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp CAGTCACTGCCCCACACCTTATCCTTCAGCTTGTGCTaGACAGGAGAGGAGTGGCTGGGATTCCTGACTAGG +
Preference number: 3 (lower is better)
Translates to: QSLPHTLSFSLC*TGEEWLGFLTR
Trigger: CCTAGTCAGGAATCCCAGCCACTCCTCTCCTGTGCAGCACAAGCTGAAGGATAAGGTGTGGGGCAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp GTGGAATCTACAGAGACAGTAGGCCTTGCTGAGCTGTaGTGGGCTCTGCCCAGTTTGAGCTTCCCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: VESTETVGLAEL*WALPSLSFPAA
Trigger: AGCAGCAGGGAAGCTCAAACTGGGCAGAGCCCACCACAGCTCAGCAAGGCCTACTGTCTCTGTAGATTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp TGCTGCCTGATCCTTACTGTGGAAGCTTCGTTCCAGTaGGGCATCTACCTCTCTGAGGTGTCTTTCGGCGCC +
Preference number: 3 (lower is better)
Translates to: CCLILTVEASFQ*GIYLSEVSFGA
Trigger: GGCGCCGAAAGACACCTCAGAGAGGTAGATGCCCCACTGGAACGAAGCTTCCACAGTAAGGATCAGGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp TTATCAGGAATCACACAGGCAGCCCCACGCAGTCACTaGCCCACACCTTATCCTTCAGCTTGTGCTGCACAG +
Preference number: 3 (lower is better)
Translates to: LSGITQAAPRSH*PTPYPSACAAQ
Trigger: CTGTGCAGCACAAGCTGAAGGATAAGGTGTGGGGCAGTGACTGCGTGGGGCTGCCTGTGTGATTCCTGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp GAGTTTGCTGGAGGTCCACTCCAGACCCTGTTTGCCTaGGTGTCACCAGTGGAGGCTGCAGAACAGCAAATA +
Preference number: 3 (lower is better)
Translates to: EFAGGPLQTLFA*VSPVEAAEQQI
Trigger: TATTTGCTGTTCTGCAGCCTCCACTGGTGACACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTGGTTTTACCTACCTTaGGTCTCTGATGTTGGTGTC +
Preference number: 3 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVWFYLP*VSDVGV
Trigger: GACACCAACATCAGAGACCAAAGGTAGGTAAAACCA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGAGGGCATCCTTGCCTaGTGCTGGTCTTCAAAGGAA +
Preference number: 3 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLEGILA*CWSSKE
Trigger: TTCCTTTGAAGACCAGCACAAGGCAAGGATGCCCTC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTTGTGTGTGTCAGGTTaGTCAAAGATCAGATGGTGG +
Preference number: 3 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVLCVSG*SKIRWW
Trigger: CCACCATCTGATCTTTGACAAACCTGACACACACAA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTGCCCAATAGTGGGATaGCTGGGTCAAATGGTATTT +
Preference number: 3 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVCPIVG*LGQMVF
Trigger: AAATACCATTTGACCCAGCAATCCCACTATTGGGCA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp AACCAGGCATGGGAGGGGATTTCGTGGTCTGCCAGTTaGGAAGACTGTGGGAAAAGAGCAGTATTTGGGCAG +
Preference number: 3 (lower is better)
Translates to: NQAWEGISWSAS*EDCGKRAVFGQ
Trigger: CTGCCCAAATACTGCTCTTTTCCCACAGTCTTCGCAACTGGCAGACCACGAAATCCCCTCCCATGCCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp CCCACTGAACCAGGCATGGGAGGGGATTTCGTGGTCTaGCAGTTGCGAAGACTGTGGGAAAAGAGCAGTATT +
Preference number: 3 (lower is better)
Translates to: PTEPGMGGDFVV*QLRRLWEKSSI
Trigger: AATACTGCTCTTTTCCCACAGTCTTCGCAACTGGCAGACCACGAAATCCCCTCCCATGCCTGGTTCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp GCTGTGGTGGGCTCTGCCCAGTTTGAGCTTCCCTGCTaGTTTGTTTACACTGTGAGCATAGAACCGCCTACT +
Preference number: 3 (lower is better)
Translates to: AVVGSAQFELPC*FVYTVSIEPPT
Trigger: AGTAGGCGGTTCTATGCTCACAGTGTAAACAAAGCAGCAGGGAAGCTCAAACTGGGCAGAGCCCACCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp TCCCTACCTCCTTGCCCACTAAGCTCCCCATTCCAGTaGGCTGCTTTCTGGTCCTTTTCCATGATTGGGCTT +
Preference number: 3 (lower is better)
Translates to: SLPPCPLSSPFQ*AAFWSFSMIGL
Trigger: AAGCCCAATCATGGAAAAGGACCAGAAAGCAGCCCACTGGAATGGGGAGCTTAGTGGGCAAGGAGGTAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGTATATTCTGTTGATTaGGGGTGGAGAGTTCTGTCG +
Preference number: 3 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQVYSVD*GWRVLS
Trigger: CGACAGAACTCTCCACCCCAAATCAACAGAATATAC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp ACCAGTGGAGGCTGCAGAACAGCAAATATTGCTGCCTaGTCCTTACTGTGGAAGCTTCGTTCCAGTGGGGCA +
Preference number: 3 (lower is better)
Translates to: TSGGCRTANIAA*SLLWKLRSSGA
Trigger: TGCCCCACTGGAACGAAGCTTCCACAGTAAGGATCAGGCAGCAATATTTGCTGTTCTGCAGCCTCCACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp GGGTGTCACCAGTGGAGGCTGCAGAACAGCAAATATTaGTGCCTGATCCTTACTGTGGAAGCTTCGTTCCAG +
Preference number: 3 (lower is better)
Translates to: GCHQWRLQNSKY*CLILTVEASFQ
Trigger: CTGGAACGAAGCTTCCACAGTAAGGATCAGGCAGCAATATTTGCTGTTCTGCAGCCTCCACTGGTGACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp AAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGCCTaGCTAGGTACATTTCAGATGAAAGTCACCCCTGCT +
Preference number: 3 (lower is better)
Translates to: KSQEPVLTQTLA*LGTFQMKVTPA
Trigger: AGCAGGGGTGACTTTCATCTGAAATGTACCTAGGCAGGCCAGAGTCTGAGTTAGGACTGGCTCCTGGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp TGCCAGTTGCGAAGACTGTGGGAAAAGAGCAGTATTTaGGCAGGAGTGTACCCCTCCTCCAGGTATAGTCAC +
Preference number: 3 (lower is better)
Translates to: CQLRRLWEKSSI*AGVYPSSRYSH
Trigger: GTGACTATACCTGGAGGAGGGGTACACTCCTGCCCAAATACTGCTCTTTTCCCACAGTCTTCGCAACTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp GCTGGCCCTGTGGTGACTTGGTGGCAGTTGTCCACTTaGATCCTTAGTTTCTATACTGAGCTACTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: AGPVVTWWQLST*ILSFYTELLAP
Trigger: AGGAGCCAGTAGCTCAGTATAGAAACTAAGGATCCAAGTGGACAACTGCCACCAAGTCACCACAGGGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTTTGCCAGTATTTTATaGAGGATTTTCGCATCGATG +
Preference number: 3 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVFASIL*RIFASM
Trigger: CATCGATGCGAAAATCCTCAATAAAATACTGGCAAA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp CTCTGTGGGCTACACCCACTGTCCAGCCAGTCCCAGTaGGACGAACCAGGTACTTTAGTTGAAAATGCAGAA +
Preference number: 3 (lower is better)
Translates to: LCGLHPLSSQSQ*DEPGTLVENAE
Trigger: TTCTGCATTTTCAACTAAAGTACCTGGTTCGTCTCACTGGGACTGGCTGGACAGTGGGTGTAGCCCACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp ACCTCCTTGCCCACTAAGCTCCCCATTCCAGTGGGCTaGTTTCTGGTCCTTTTCCATGATTGGGCTTTAGTA +
Preference number: 3 (lower is better)
Translates to: TSLPTKLPIPVG*FLVLFHDWALV
Trigger: TACTAAAGCCCAATCATGGAAAAGGACCAGAAAGCAGCCCACTGGAATGGGGAGCTTAGTGGGCAAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp CTGTTAGTTTTCCTTCTAATAGACAGGCCCCTTAGCTaGAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCA +
Preference number: 3 (lower is better)
Translates to: LLVFLLIDRPLS*RSVGVCWRSTP
Trigger: TGGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTAAGGGGCCTGTCTATTAGAAGGAAAACTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp ATAGGAGTGGTGAGAGAGGGCATCCTTGCCTTGTGCTaGTCTTCAAAGGAAATGCTTCCAGCTTTTGCCCAT +
Preference number: 3 (lower is better)
Translates to: IGVVREGILALC*SSKEMLPAFAH
Trigger: ATGGGCAAAAGCTGGAAGCATTTCCTTTGAAGACCAGCACAAGGCAAGGATGCCCTCTCTCACCACTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCGTAAAGCTCCCCAAGTaGTCTGTGTTCCGCCTCAAC +
Preference number: 3 (lower is better)
Translates to: GDWATELITGGAKKRNYIVKLPK*SVFRLN
Trigger: GTTGAGGCGGAACACAGACAACTTGGGGAGCTTTAC...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGGCTGTCTGCTGCCTTTaGTTCAGATATGCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWAVCCL*FRYALP
Trigger: GGGCAGGGCATATCTGAACAAAAGGCAGCAGACAGC...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp GCCATACAACCTGAACTGAAGTCCAGAAAGTTTAGGTaGCTGGGCCACAGAGCTAATTACTGGTGGAGCCAA +
Preference number: 3 (lower is better)
Translates to: AIQPELKSRKFR*LGHRANYWWSQ
Trigger: TTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACCTAAACTTTCTGGACTTCAGTTCAGGTTGTATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp TTGAACCAGCCTTGCATCCCAGGGAAGAAGCTGACTTaGTCGTGGTGGATAAGCTTTTTGATATGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: LNQPCIPGKKLT*SWWISFLICCW
Trigger: CCAGCAGCATATCAAAAAGCTTATCCACCACGATCAAGTCAGCTTCTTCCCTGGGATGCAAGGCTGGTTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp AGGGCATCCTTGCCTTGTGCTGGTCTTCAAAGGAAATaGTTCCAGCTTTTGCCCATTCAGTATGCTATTGGC +
Preference number: 3 (lower is better)
Translates to: RASLPCAGLQRK*FQLLPIQYAIG
Trigger: GCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCATTTCCTTTGAAGACCAGCACAAGGCAAGGATGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp GTCAAACTCATTCTCTGTCCAGTTTTGTTCCCTTGCTaGCAAGGAGTTGTGTTCCTTTGGAGGAGAAGAGGC +
Preference number: 3 (lower is better)
Translates to: VKLILCPVLFPC*QGVVFLWRRRG
Trigger: GCCTCTTCTCCTCCAAAGGAACACAACTCCTTGCCAGCAAGGGAACAAAACTGGACAGAGAATGAGTTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp AACTCACTCACAGAGGGTGGCTTCCCTAATCCCAAGTaGGTTTTGATTGAGTCCTGTTTTAGCTCCCTCTCT +
Preference number: 3 (lower is better)
Translates to: NSLTEGGFPNPK*VLIESCFSSLS
Trigger: AGAGAGGGAGCTAAAACAGGACTCAATCAAAACCCACTTGGGATTAGGGAAGCCACCCTCTGTGAGTGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGTTAGCTGCAGGTCTGTaGGAGTTTGCTGGAGGTCCA +
Preference number: 3 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWLAAGL*EFAGGP
Trigger: TGGACCTCCAGCAAACTCCAACAGACCTGCAGCTAA...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGTCCTTCATTTCAACCTaGGTGAATCTGACAATTATG +
Preference number: 3 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLSFIST*VNLTIM
Trigger: CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGA...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGTTTTCTGCTTTCCATTaGCTTGGTAAATCTTCCTAC +
Preference number: 3 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLFSAFH*LGKSSY
Trigger: GTAGGAAGATTTACCAAGCAAATGGAAAGCAGAAAA...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGGGTCAGGGACCCACTaGAGGAGGCAGTCTGTCTAT +
Preference number: 3 (lower is better)
Translates to: LGKLTADIVLNGERLSTFGSGTH*RRQSVY
Trigger: ATAGACAGACTGCCTCCTCAAGTGGGTCCCTGACCC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp CCAGGGAGCTCTTTCAGATTGGCTCCTGTGTCTGTCTaGCATGCTTCTATCCTTTTGTTTTTGAGCACTTGC +
Preference number: 3 (lower is better)
Translates to: PGSSFRLAPVSV*HASILLFLSTC
Trigger: GCAAGTGCTCAAAAACAAAAGGATAGAAGCATGTCAGACAGACACAGGAGCCAATCTGAAAGAGCTCCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp CAAAGTGGCTGCACCATTTTACATTCCCACCAGCAATaGATTAGGGCTCCAGTTTCTCCACATCATCACCAA +
Preference number: 3 (lower is better)
Translates to: QSGCTILHSHQQ*IRAPVSPHHHQ
Trigger: TTGGTGATGATGTGGAGAAACTGGAGCCCTAATGCATTGCTGGTGGGAATGTAAAATGGTGCAGCCACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp TTCAAAACATTACAGTACCTGAAGTGGACACTGCTTTaGCTGTATGACCCCAGTAAGGTAGGGTCAGATGGG +
Preference number: 3 (lower is better)
Translates to: FKTLQYLKWTLL*LYDPSKVGSDG
Trigger: CCCATCTGACCCTACCTTACTGGGGTCATACAGCCAAAGCAGTGTCCACTTCAGGTACTGTAATGTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCACTGGAGCATGCTTCTaGGCCTGGATGGCAAAGTCC +
Preference number: 3 (lower is better)
Translates to: LGKLTADIVLNGERLSTFTGACF*AWMAKS
Trigger: GGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp CCTGCTGTTCTCATGATAGTGAGTTCTCATGAGATCTaGTGGCTTTATAGAGGCTTTGCCCCACTTTGCTCT +
Preference number: 3 (lower is better)
Translates to: PAVLMIVSSHEI*WLYRGFAPLCS
Trigger: AGAGCAAAGTGGGGCAAAGCCTCTATAAAGCCATCAGATCTCATGAGAACTCACTATCATGAGAACAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp CTTGTGCTGGTCTTCAAAGGAAATGCTTCCAGCTTTTaGCCATTCAGTATGCTATTGGCTGTGGGTTTGTCA +
Preference number: 3 (lower is better)
Translates to: LVLVFKGNASSF*PFSMLLAVGLS
Trigger: TGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCATTTCCTTTGAAGACCAGCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp GCTCTTATTTTTGTCACAAGTCCTTATGAGCTTGGTTaGGTGAAGGGTCACCCAGAAAAGAACCAGCTTCCA +
Preference number: 3 (lower is better)
Translates to: ALIFVTSPYELG*VKGHPEKNQLP
Trigger: TGGAAGCTGGTTCTTTTCTGGGTGACCCTTCACCCAACCAAGCTCATAAGGACTTGTGACAAAAATAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAGGAAAAGAGCAGTATTaGGGCAGGAGTGTACCCCTC +
Preference number: 3 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIGKEQY*GRSVPL
Trigger: GAGGGGTACACTCCTGCCCAAATACTGCTCTTTTCC...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAATTCTCTGTCCAGTTTaGTTCCCTTGCTGGCAAGGA +
Preference number: 3 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKILCPV*FPCWQG
Trigger: TCCTTGCCAGCAAGGGAACAAAACTGGACAGAGAAT...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGTGATGCCTCCAGCTTaGTTCTTCTTGCCCAGGATT +
Preference number: 3 (lower is better)
Translates to: STCLVSGTTRCSRLILHFVMPPA*FFLPRI
Trigger: AATCCTGGGCAAGAAGAACAAAGCTGGAGGCATCAC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp TTGTTACATAGGTATACACATGCCATGGTGGTTTGCTaGACCCACCAACCTGTCACCTACATTAGGTATTTC +
Preference number: 3 (lower is better)
Translates to: LLHRYTHAMVVC*THQPVTYIRYF
Trigger: GAAATACCTAATGTAGGTGACAGGTTGGTGGGTGCAGCAAACCACCATGGCATGTGTATACCTATGTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp GTTTTGTTACATAGGTATACACATGCCATGGTGGTTTaGTGCACCCACCAACCTGTCACCTACATTAGGTAT +
Preference number: 3 (lower is better)
Translates to: VLLHRYTHAMVV*CTHQPVTYIRY
Trigger: ATACCTAATGTAGGTGACAGGTTGGTGGGTGCAGCAAACCACCATGGCATGTGTATACCTATGTAACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp GTTGCAAGGTGGCTGGATGGCTTTCTTCTGAAGTCATaGAATATTGTCCTTCACTTTGGTTATGACTGCAGA +
Preference number: 3 (lower is better)
Translates to: VARWLDGFLLKS*NIVLHFGYDCR
Trigger: TCTGCAGTCATAACCAAAGTGAAGGACAATATTGCATGACTTCAGAAGAAAGCCATCCAGCCACCTTGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp CAAGGGAGTCCAGAATTTCCTGAACATGTTGCAAGGTaGCTGGATGGCTTTCTTCTGAAGTCATGCAATATT +
Preference number: 3 (lower is better)
Translates to: QGSPEFPEHVAR*LDGFLLKSCNI
Trigger: AATATTGCATGACTTCAGAAGAAAGCCATCCAGCCACCTTGCAACATGTTCAGGAAATTCTGGACTCCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp CTGAACATGTTGCAAGGTGGCTGGATGGCTTTCTTCTaGAGTCATGCAATATTGTCCTTCACTTTGGTTATG +
Preference number: 3 (lower is better)
Translates to: LNMLQGGWMAFF*SHAILSFTLVM
Trigger: CATAACCAAAGTGAAGGACAATATTGCATGACTTCAGAAGAAAGCCATCCAGCCACCTTGCAACATGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp TTATTTTTGTCACAAGTCCTTATGAGCTTGGTTGGGTaGAGGGTCACCCAGAAAAGAACCAGCTTCCACTTT +
Preference number: 3 (lower is better)
Translates to: LFLSQVLMSLVG*RVTQKRTSFHF
Trigger: AAAGTGGAAGCTGGTTCTTTTCTGGGTGACCCTTCACCCAACCAAGCTCATAAGGACTTGTGACAAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp TCCAGAGCTCATTGGGCTTTTTGTTGCTTAGTTAGATaGGCCATAGACAAGGAGTTTGAGACCTGGGTTTTA +
Preference number: 3 (lower is better)
Translates to: SRAHWAFCCLVR*AIDKEFETWVL
Trigger: TAAAACCCAGGTCTCAAACTCCTTGTCTATGGCTCATCTAACTAAGCAACAAAAAGCCCAATGAGCTCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp AAGGAGTTGTGTTCCTTTGGAGGAGAAGAGGCATTCTaGTTTTTGGAATTTTCAGCCTTTCTGGTCTGGTTT +
Preference number: 3 (lower is better)
Translates to: KELCSFGGEEAF*FLEFSAFLVWF
Trigger: AAACCAGACCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAACACAACTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp CTTTACCATTTGGCATGTTTTTGCAGTGGCTGGTACTaGTTGTTCCTGTCCATTTTAGTGCTTACTTCAGGA +
Preference number: 3 (lower is better)
Translates to: LYHLACFCSGWY*LFLSILVLTSG
Trigger: TCCTGAAGTAAGCACTAAAATGGACAGGAACAACCAGTACCAGCCACTGCAAAAACATGCCAAATGGTAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp GATGGTCTTTACCATTTGGCATGTTTTTGCAGTGGCTaGTACTGGTTGTTCCTGTCCATTTTAGTGCTTACT +
Preference number: 3 (lower is better)
Translates to: DGLYHLACFCSG*YWLFLSILVLT
Trigger: AGTAAGCACTAAAATGGACAGGAACAACCAGTACCAGCCACTGCAAAAACATGCCAAATGGTAAAGACCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATTTCGTGGTCTGCCAGTaGCGAAGACTGTGGGAAAAG +
Preference number: 3 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYFVVCQ*RRLWEK
Trigger: CTTTTCCCACAGTCTTCGCAACTGGCAGACCACGAA...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAACTGTATTTCCTGAATTaGAATGTTGGCCTTCCTTGC +
Preference number: 3 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKLYFLN*NVGLPC
Trigger: GCAAGGAAGGCCAACATTCAAATTCAGGAAATACAG...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATTCGCTGATGGTAGTTaGTATTTCTGTGGGATCAGT +
Preference number: 3 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKFADGS*YFCGIS
Trigger: ACTGATCCCACAGAAATACAAACTACCATCAGCGAA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp ACCAGACCATCATGGCGGCTAGAATTCCAGAAACGGTaGATAGAAGTTCATCTTCTATTTTGTCTTCATGGA +
Preference number: 3 (lower is better)
Translates to: TRPSWRLEFQKR*IEVHLLFCLHG
Trigger: TCCATGAAGACAAAATAGAAGATGAACTTCTATTCACCGTTTCTGGAATTCTAGCCGCCATGATGGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp AAGGCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTaGTTGTCTGTAAAGGATTTTATTTCTCCTTCACTT +
Preference number: 3 (lower is better)
Translates to: KAGLVVTKSLSI*LSVKDFISPSL
Trigger: AAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp CTTGTACTAGGGATACAAAGACTTGGTTATTCTTGTTaGAGTAATGATTCTCCTCTATCTGGGGAGGTCATC +
Preference number: 3 (lower is better)
Translates to: LVLGIQRLGYSC*SNDSPLSGEVI
Trigger: GATGACCTCCCCAGATAGAGGAGAATCATTACTCCAACAAGAATAACCAAGTCTTTGTATCCCTAGTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp ATATGTGTCAACTTCAAAACATTACAGTACCTGAAGTaGACACTGCTTTGGCTGTATGACCCCAGTAAGGTA +
Preference number: 3 (lower is better)
Translates to: ICVNFKTLQYLK*TLLWLYDPSKV
Trigger: TACCTTACTGGGGTCATACAGCCAAAGCAGTGTCCACTTCAGGTACTGTAATGTTTTGAAGTTGACACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTCTGGGAGATGGGAGATaGAAACTTAAAGAGGTAAAG +
Preference number: 3 (lower is better)
Translates to: STCLVSGTTRCSRLILHFLGDGR*KLKEVK
Trigger: CTTTACCTCTTTAAGTTTCAATCTCCCATCTCCCAG...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGGTTTCTCCCCATCTTaGTGGTTTTACCTACCTTTG +
Preference number: 3 (lower is better)
Translates to: LGKLTADIVLNGERLSTFGFSPS*WFYLPL
Trigger: CAAAGGTAGGTAAAACCACAAAGATGGGGAGAAACC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAAGTCACCCATTAATATaGTGTGGGAGTCTAAATCTC +
Preference number: 3 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKSHPLI*CGSLNL
Trigger: GAGATTTAGACTCCCACACAATATTAATGGGTGACT...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTGGTGGATAAGCTTTTaGATATGCTGCTGGATTCGG +
Preference number: 3 (lower is better)
Translates to: LGKLTADIVLNGERLSTFWWISF*ICCWIR
Trigger: CCGAATCCAGCAGCATATCAAAAAGCTTATCCACCA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATTCCAGTTTTGTTCCCTaGCTGGCAAGGAGTTGTGTT +
Preference number: 3 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYSSFVP*LARSCV
Trigger: AACACAACTCCTTGCCAGCAAGGGAACAAAACTGGA...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGCCTACTTCTGTCAACTaGTCAAACTCATTCTCTGTC +
Preference number: 3 (lower is better)
Translates to: AALNSFSFISTLVNLTIMPTSVN*SNSFSV
Trigger: GACAGAGAATGAGTTTGACAAGTTGACAGAAGTAGG...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCAGAGTGTTTTCAAACTaGGTTCTGTTCTCCCCATCA +
Preference number: 3 (lower is better)
Translates to: LGKLTADIVLNGERLSTFRVFSN*VLFSPS
Trigger: TGATGGGGAGAACAGAACCAAGTTTGAAAACACTCT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATAGTGGCTGGTACTGGTaGTTCCTGTCCATTTTAGTG +
Preference number: 3 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYSGWYW*FLSILV
Trigger: CACTAAAATGGACAGGAACAACCAGTACCAGCCACT...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCTGCTTTCCATTTGCTaGGTAAATCTTCCTACATCC +
Preference number: 3 (lower is better)
Translates to: LGKLTADIVLNGERLSTFLLSIC*VNLPTS
Trigger: GGATGTAGGAAGATTTACCAAGCAAATGGAAAGCAG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGCCATTGTCATGATATaGATTCTTCCTATCCATGAG +
Preference number: 3 (lower is better)
Translates to: STCLVSGTTRCSRLILHFAIVMI*ILPIHE
Trigger: CTCATGGATAGGAAGAATCAATATCATGACAATGGC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp CCTTTAGCTTGGAGAAGTTTGTTATTACCGACCTTCTaGAGCCTACTTCTGTCAACTTGTCAAACTCATTCT +
Preference number: 3 (lower is better)
Translates to: PLAWRSLLLPTF*SLLLSTCQTHS
Trigger: AGAATGAGTTTGACAAGTTGACAGAAGTAGGCTTCAGAAGGTCGGTAATAACAAACTTCTCCAAGCTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp GGAACAGGTTGTTCAGTTTCCATGCAGTTGTGCAGTTaGGTGAGATTCTTGATCCTGAGTTCTAATTTGATT +
Preference number: 3 (lower is better)
Translates to: GTGCSVSMQLCS*VRFLILSSNLI
Trigger: AATCAAATTAGAACTCAGGATCAAGAATCTCACTCAACTGCACAACTGCATGGAAACTGAACAACCTGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp TCAAGATTTTTAGCTTCCTTGCGACGCATTAGAACATaGTCCTTTAGCTTGGAGAAGTTTGTTATTACCGAC +
Preference number: 3 (lower is better)
Translates to: SRFLASLRRIRT*SFSLEKFVITD
Trigger: GTCGGTAATAACAAACTTCTCCAAGCTAAAGGAGCATGTTCTAATGCGTCGCAAGGAAGCTAAAAATCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp ATTAGGTCTGCTTGGTCCAGAGCTGAGTTCAAGTCCTaGATATCTTTGTTAATTTTCTGTCTTGTTGATCTG +
Preference number: 3 (lower is better)
Translates to: IRSAWSRAEFKS*ISLLIFCLVDL
Trigger: CAGATCAACAAGACAGAAAATTAACAAAGATATCCAGGACTTGAACTCAGCTCTGGACCAAGCAGACCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTATCCTTTCTTCCACTaGATCGAATTGGCTATTGAA +
Preference number: 3 (lower is better)
Translates to: STCLVSGTTRCSRLILHFYPFFH*IELAIE
Trigger: TTCAATAGCCAATTCGATCAAGTGGAAGAAAGGATA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGCTGTTCTTGTTGAATaGATCCCTTTACCATTATGT +
Preference number: 3 (lower is better)
Translates to: STCLVSGTTRCSRLILHFAVLVE*IPLPLC
Trigger: ACATAATGGTAAAGGGATCAATTCAACAAGAACAGC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGGATTCACTGATTTTTaGAAGGGTTTGTTGAGTCTC +
Preference number: 3 (lower is better)
Translates to: LGKLTADIVLNGERLSTFGFTDF*KGLLSL
Trigger: GAGACTCAACAAACCCTTCAAAAAATCAGTGAATCC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp TGTGGGAGTCTAAATCTCTTTGTAGAACTTGCTTTATaGATCTGGGTGCTCCTGTATTGGGTGCATATATAT +
Preference number: 3 (lower is better)
Translates to: CGSLNLFVELAL*IWVLLYWVHIY
Trigger: ATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAGAGATTTAGACTCCCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp GCAAACAGAGACAATTTGACTTCCTCTCTTCCTATTTaGATATGCTTTATTGCTTTCTCTTGCCTGATTGCC +
Preference number: 3 (lower is better)
Translates to: ANRDNLTSSLPI*ICFIAFSCLIA
Trigger: GGCAATCAGGCAAGAGAAAGCAATAAAGCATATTCAAATAGGAAGAGAGGAAGTCAAATTGTCTCTGTTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp GATAATGCTATGAACATTTGCCTACGAGTCTTGATGTaGACACATTTCCACTTCTCTTCTCATGGAATAGCA +
Preference number: 3 (lower is better)
Translates to: DNAMNICLRVLM*THFHFSSHGIA
Trigger: TGCTATTCCATGAGAAGAGAAGTGGAAATGTGTTCACATCAAGACTCGTAGGCAAATGTTCATAGCATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp ATCTCCTTCAGTTCTGCTCTGATCTTAGTTATTTCTTaGCTTCTGCTAGCTTTTGAATTTGTTTGGTCTTGC +
Preference number: 3 (lower is better)
Translates to: ISFSSALILVIS*LLLAFEFVWSC
Trigger: GCAAGACCAAACAAATTCAAAAGCTAGCAGAAGGCAAGAAATAACTAAGATCAGAGCAGAACTGAAGGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp TTCTTAATCCAGTCTATCATTGACGGGCATTTGGGTTaGTTTCAAATCTTTGCTATTGTGAATAGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: FLIQSIIDGHLG*FQIFAIVNSAA
Trigger: TGCTGCACTATTCACAATAGCAAAGATTTGAAACCAACCCAAATGCCCGTCAATGATAGACTGGATTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp CAGCAATTTACAAAGAGGAAAATGCATCATGATCAGTaGGTCTTATCCCAGGAACGCAAGGTTAATTTAACA +
Preference number: 3 (lower is better)
Translates to: QQFTKRKMHHDQ*VLSQERKVNLT
Trigger: TGTTAAATTAACCTTGCGTTCCTGGGATAAGACCCACTGATCATGATGCATTTTCCTCTTTGTAAATTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp TTCTATCCTTTTGTTTTTGAGCACTTGCTTAGTTTCTaGTACTACAAGATGCTCCAGGCTTATCTTGCATTT +
Preference number: 3 (lower is better)
Translates to: FYPFVFEHLLSF*YYKMLQAYLAF
Trigger: AAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCTCAAAAACAAAAGGATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR TCA 72 bp TATTTAGAAACCAAAATCCAGCACAGTACTTTGAACTaGATTCTGCTTCAGTCCTCCCAAACTAACATAAAC +
Preference number: 3 (lower is better)
Translates to: YLETKIQHSTLN*ILLQSSQTNIN
Trigger: GTTTATGTTAGTTTGGGAGGACTGAAGCAGAATTCAGTTCAAAGTACTGTGCTGGATTTTGGTTTCTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR GCA 72 bp TTTGTTCTCGTTGGTTCCAAAGAACATCTTTATTTCTaGCTTCATTTCGTTATTTACCCAGTAGTCATTCAG +
Preference number: 3 (lower is better)
Translates to: FVLVGSKEHLYF*LHFVIYPVVIQ
Trigger: CTGAATGACTACTGGGTAAATAACGAAATGAAGGCAGAAATAAAGATGTTCTTTGGAACCAACGAGAACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CCA 72 bp TATTGTTTCCTGATTTTTAATGATCGCCATTCTAACTaGCATGAGATGGTATCTCACTGTGGTTTTGATTTT +
Preference number: 3 (lower is better)
Translates to: YCFLIFNDRHSN*HEMVSHCGFDF
Trigger: AAAATCAAAACCACAGTGAGATACCATCTCATGCCAGTTAGAATGGCGATCATTAAAAATCAGGAAACAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp CCCCTTGGCGCTTCCCAGGTGAGGCGATGCCCCACCTaGCTTCGGCTAACCCTCTGTGGGCTACACCCACTG +
Preference number: 4 (lower is better)
Translates to: PLGASQVRRCPT*LRLTLCGLHPL
Trigger: CAGTGGGTGTAGCCCACAGAGGGTTAGCCGAAGCAAGGTGGGGCATCGCCTCACCTGGGAAGCGCCAAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGGGTCCGCTGTTAATCTaGTGGGCTTCCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVGPLLI*WASLCG
Trigger: CCCACAAAGGGAAGCCCATCAGATTAACAGCGGACC...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGCCACTGAACCAGGCATaGGAGGGGATTTCGTGGTCT +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVPLNQA*EGISWS
Trigger: AGACCACGAAATCCCCTCCCATGCCTGGTTCAGTGG...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGGTCAGGGACCCACTTaGGGAGGCAGTCTGTCTATT +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQGQGPT*GGSLSI
Trigger: AATAGACAGACTGCCTCCTCAAGTGGGTCCCTGACC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCAGCTGGCCCTGTGGTaGCTTGGTGGCAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLQLALW*LGGSCP
Trigger: TGGACAACTGCCACCAAGTCACCACAGGGCCAGCTG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTTGCCTAGGCTGGAGTaGAGTGCCACAATCATGGCT +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVLPRLE*SATIMA
Trigger: AGCCATGATTGTGGCACTGCACTCCAGCCTAGGCAA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTTCAGCTTGTGCTaGACAGGAGAGGAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQSFSLC*TGEEWL
Trigger: CAGCCACTCCTCTCCTGTGCAGCACAAGCTGAAGGA...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCCCTCCCAAAGCAGCTaGCCCTGTGGTGACTTGGTG +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLPSQSS*PCGDLV
Trigger: CACCAAGTCACCACAGGGCCAGCTGCTTTGGGAGGG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCTTGGCAGAAGTGTATaGGAGGCAGATGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQLGRSV*EADAAP
Trigger: GGGTGCTGCATCTGCCTCCCATACACTTCTGCCAAG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGGCAGTGCCACAATCATaGCTCACTGAAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVAVPQS*LTEALT
Trigger: GGTCAAGGCTTCAGTGAGCCATGATTGTGGCACTGC...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TGTTGGAGTTTGCTGGAGGTCCACTCCAGACCCTGTTaGCCTGGGTGTCACCAGTGGAGGCTGCAGAACAGC +
Preference number: 4 (lower is better)
Translates to: CWSLLEVHSRPC*PGCHQWRLQNS
Trigger: GCTGTTCTGCAGCCTCCACTGGTGACACCCAGGCAAACAGGGTCTGGAGTGGACCTCCAGCAAACTCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCCTTCCTGCCGCCCTGTaGAGAAGGTGCCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPLPAAL*RRCLSS
Trigger: GGAAGAAAGGCACCTTCTTCACAGGGCGGCAGGAAG...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCGGGCGTGGGACCCACTaGACCAGGCATGGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTGRGTH*TRHGRG
Trigger: TCCCCTCCCATGCCTGGTTCAGTGGGTCCCACGCCC...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCCTTTGTGGGTAACCTaGCCTTTCTCTCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLPLWVT*PFSLAA
Trigger: GGCAGCCAGAGAGAAAGGTCAGGTTACCCACAAAGG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGATATCCCTACCTCCTTaGCCACTAAGCTCCCCATTC +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQISLPP*PLSSPF
Trigger: GAATGGGGAGCTTAGTGGGCAAGGAGGTAGGGATAT...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCTCAAGCAGTCCTCCTaGCTCTGCCTCCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLLKQSS*LCLQSA
Trigger: AGCACTTTGGAGGCAGAGGCAGGAGGACTGCTTGAG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCGTCATCCTCTGCAGTTaGGGACTGAAGGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPVILCS*GLKDWE
Trigger: CTCCCAGTCCTTCAGTCCCCAACTGCAGAGGATGAC...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTCTGGTCCTTTTCCATaGTTGGGCTTTAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVSGPFP*LGFSSC
Trigger: ACAGCTACTAAAGCCCAATCATGGAAAAGGACCAGA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGTCCAGCCAGTCCCAGTaGGACGAACCAGGTACTTTA +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLSSQSQ*DEPGTL
Trigger: TAAAGTACCTGGTTCGTCTCACTGGGACTGGCTGGA...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGCAGCTTTGTTCTTCTTaGCCAGGATTGTCTTGGCTA +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVQLCSS*PGLSWL
Trigger: TAGCCAAGACAATCCTGGGCAAGAAGAACAAAGCTG...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCCTCAGTCTCCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPLSLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGGAGACTGAG...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGGCTTTGCCCCACTTTaGTCTGCACTTCTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLGFAPL*SALLLP
Trigger: AGGAAGGAGAAGTGCAGAGCAAAGTGGGGCAAAGCC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTTGGTGTCCTATGGATaGGGTTTTGGTGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVLVSYG*GFGVDV
Trigger: GACATCTACACCAAAACCCCATCCATAGGACACCAA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCGGTATACACATGCCATaGTGGTTTGCTGCACCCACC +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPGIHMP*WFAAPT
Trigger: GGTGGGTGCAGCAAACCACCATGGCATGTGTATACC...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp GAACCAGGCATGGGAGGGGATTTCGTGGTCTGCCAGTaGCGAAGACTGTGGGAAAAGAGCAGTATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: EPGMGGDFVVCQ*RRLWEKSSIWA
Trigger: TGCCCAAATACTGCTCTTTTCCCACAGTCTTCGCAACTGGCAGACCACGAAATCCCCTCCCATGCCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp ACCCACTTGAGGAGGCAGTCTGTCTATTATCGGAGCTaGAACGCGGTGCTGGGAGAACCACTGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: THLRRQSVYYRS*NAVLGEPLLSS
Trigger: TGAAGAGAGCAGTGGTTCTCCCAGCACCGCGTTCAAGCTCCGATAATAGACAGACTGCCTCCTCAAGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCGACAGTAGGCCTTGCTaGGCTGTGGTGGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTDSRPC*AVVGSA
Trigger: GGCAGAGCCCACCACAGCTCAGCAAGGCCTACTGTC...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGCAAATATTGCTGCCTaGTCCTTACTGTGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQANIAA*SLLWKL
Trigger: AAGCTTCCACAGTAAGGATCAGGCAGCAATATTTGC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCCCATGCCTATGTCCTaGATGGTATTGCCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLPMPMS*MVLPRF
Trigger: AAACCTGGGCAATACCATTCAGGACATAGGCATGGG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCCAGTTCTAGATCCTTaGGGAGTCGTCACACTGACT +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLPVLDP*GVVTLT
Trigger: AGTCAGTGTGACGACTCCTCAAGGATCTAGAACTGG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCACAGTACTTTGAACTaGATTCTGCTTCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQHSTLN*ILLQSS
Trigger: GGAGGACTGAAGCAGAATTCAGTTCAAAGTACTGTG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTGTCACAAGTCCTTATaGGCTTGGTTGGGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPCHKSL*AWLGEG
Trigger: CCCTTCACCCAACCAAGCTCATAAGGACTTGTGACA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCAACCAAGGTATACTCTaGCTCCAACCAGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPNQGIL*LQPGSP
Trigger: AGGGGATCCTGGTTGGAGTCAGAGTATACCTTGGTT...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCGACGCATTAGAACATaGTCCTTTAGCTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQRRIRT*SFSLEK
Trigger: CTTCTCCAAGCTAAAGGAGCATGTTCTAATGCGTCG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGCCAGTTACAGTTTTCTaGATATGGCTAGCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVPVTVF*IWLARF
Trigger: AAAACGGGCTAGCCATATGCAGAAAACTGTAACTGG...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGAAGGAGTTTGAGACCTaGGTTTTAGCAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQKEFET*VLATAL
Trigger: CAGAGCAGTTGCTAAAACCCAGGTCTCAAACTCCTT...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGAGTAGCTGGCTTTCTTaGGGTGTTACTTTCCACAAA +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVSSWLS*GVTFHK
Trigger: TTTGTGGAAAGTAACACCCCAAGAAAGCCAGCTACT...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp GGGACGTTTAAGTCTGGAGAAGCTGTCTGCTGCCTTTaGTTCAGATATGCCCTGCCCCTGGAGGTGGAATCT +
Preference number: 4 (lower is better)
Translates to: GTFKSGEAVCCL*FRYALPLEVES
Trigger: AGATTCCACCTCCAGGGGCAGGGCATATCTGAACAAAAGGCAGCAGACAGCTTCTCCAGACTTAAACGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp ACAGGAGAGGAGTGGCTGGGATTCCTGACTAGGGCTTaGATGAGAGTGCATGCACACTGGAGCATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TGEEWLGFLTRA*MRVHAHWSMLL
Trigger: AAGAAGCATGCTCCAGTGTGCATGCACTCTCATCAAAGCCCTAGTCAGGAATCCCAGCCACTCCTCTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCCTACCTTTGGTCTCTaGTGTTGGTGTCCTATGGAT +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLPTFGL*CWCPMD
Trigger: ATCCATAGGACACCAACATCAGAGACCAAAGGTAGG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGATCCTTTCTTCCACTTaGTCGAATTGGCTATTGAAG +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVILSST*SNWLLK
Trigger: CTTCAATAGCCAATTCGATCAAGTGGAAGAAAGGAT...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGATGGGAGTTCACTCATaGTTTGGCTCTTTGTCTATT +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVMGVHS*FGSLSI
Trigger: AATAGACAAAGAGCCAAATCATGAGTGAACTCCCAT...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCCTAGAGCTAGGTGACTaGGAACTTGCTTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPLELGD*ELAFGL
Trigger: CAGACCAAAAGCAAGTTCTCAGTCACCTAGCTCTAG...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGGAGAATGTTTCTGAATaGCAAGAATTGGGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVENVSE*QELGSV
Trigger: TACTGACCCCAATTCTTGGCATTCAGAAACATTCTC...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCAGAACAGCAAATATTaGTGCCTGATCCTTACTGTG +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQQNSKY*CLILTV
Trigger: CACAGTAAGGATCAGGCAGCAATATTTGCTGTTCTG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGGTCTTCAAAGGAAATaGTTCCAGCTTTTGCCCATT +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQGLQRK*FQLLPI
Trigger: AATGGGCAAAAGCTGGAAGCATTTCCTTTGAAGACC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCTTTATCCATGTCCCTaGAAAGGACATGAACTCATC +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQLYPCP*KGHELI
Trigger: GATGAGTTCATGTCCTTTGCAGGGACATGGATAAAG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCCATTCCCACCAGCAATaGATTAGGGCTCCAGTTTCT +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPHSHQQ*IRAPVS
Trigger: AGAAACTGGAGCCCTAATGCATTGCTGGTGGGAATG...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTTCCCCTTTGCCTTCTaGTATGATTGTAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVFPFAF*YDCKFP
Trigger: AGGAAACTTACAATCATAGCAGAAGGCAAAGGGGAA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCACAGAGCTAATTACTaGTGGAGCCAAGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQHRANY*WSQEEK
Trigger: TTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTGTTTTTGCAGTGGCTaGTACTGGTTGTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPCFCSG*YWLFLS
Trigger: GGACAGGAACAACCAGTACCAGCCACTGCAAAAACA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTCATTGACGGGCATTTaGGTTGGTTTCAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVSLTGI*VGFKSL
Trigger: CAAAGATTTGAAACCAACCCAAATGCCCGTCAATGA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCACTTGCTTAGTTTCTaGTACTACAAGATGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQHLLSF*YYKMLQ
Trigger: CTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGTGCAAGGTGGCTGGATaGCTTTCTTCTGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLCKVAG*LSSEVM
Trigger: CATGACTTCAGAAGAAAGCCATCCAGCCACCTTGCA...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCACAGGCCCTGGTGTGTaGTGTTACCCTCCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYITGPGV*CYPPCV
Trigger: GACACAGGGAGGGTAACATCACACACCAGGGCCTGT...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCCTAGCACTATTTGTTaGAAAGACCATCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQPSTIC*KDHLFS
Trigger: GGAGAAAAGATGGTCTTTTCAACAAATAGTGCTAGG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGTTGAGCCCAGGAGTTTaGCTTCAGAGTATGCAACAT +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLLSPGV*LQSMQH
Trigger: ATGTTGCATACTCTGAAGTCAAACTCCTGGGCTCAA...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCAAACATTACAGTACCTaGAGTGGACACTGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPKHYST*SGHCFG
Trigger: GCCAAAGCAGTGTCCACTTCAGGTACTGTAATGTTT...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCATAGACAAGGAGTTTaGGACCTGGGTTTTAGCAAC +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLHRQGV*DLGFSN
Trigger: GTTGCTAAAACCCAGGTCTCAAACTCCTTGTCTATG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCTGTTTTTGTACCAGTaGCATGCTGTTTTGGTTACT +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQLFLYQ*HAVLVT
Trigger: AGTAACCAAAACAGCATGGCACTGGTACAAAAACAG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGTCCTTTTCCATGATTaGGCTTTAGTAGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQVLFHD*ALVAVI
Trigger: AATGACAGCTACTAAAGCCCAATCATGGAAAAGGAC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCCTTGCTGAGCTGTGGTaGGCTCTGCCCAGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTLAELW*ALPSLS
Trigger: GCTCAAACTGGGCAGAGCCCACCACAGCTCAGCAAG...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGGGCCTTGCTGAGCTGTaGTGGGCTCTGCCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWGLAEL*WALPSL
Trigger: CAAACTGGGCAGAGCCCACCACAGCTCAGCAAGGCC...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGGTTTTACCTACCTTTaGTCTCTGATGTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLGFTYL*SLMLVS
Trigger: GGACACCAACATCAGAGACCAAAGGTAGGTAAAACC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGACGGGCATTTGGGTTaGTTTCAAATCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQDGHLG*FQIFAI
Trigger: AATAGCAAAGATTTGAAACCAACCCAAATGCCCGTC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGCTGCATAGTATTCCATaGTATACATGTGCCACATTT +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVLHSIP*YTCATF
Trigger: AAATGTGGCACATGTATACCATGGAATACTATGCAG...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCGCTTCTTGGCCTGGATaGCAAAGTCCCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTASWPG*QSPRSQ
Trigger: CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGC...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp GGTGGAGCCAAGAAGAGAAATTATATCCCTACCTCCTaGCCCACTAAGCTCCCCATTCCAGTGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GGAKKRNYIPTS*PTKLPIPVGCF
Trigger: AAAGCAGCCCACTGGAATGGGGAGCTTAGTGGGCAAGGAGGTAGGGATATAATTTCTCTTCTTGGCTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp CCCAAAGCAGCTGGCCCTGTGGTGACTTGGTGGCAGTaGTCCACTTGGATCCTTAGTTTCTATACTGAGCTA +
Preference number: 4 (lower is better)
Translates to: PKAAGPVVTWWQ*STWILSFYTEL
Trigger: TAGCTCAGTATAGAAACTAAGGATCCAAGTGGACAACTGCCACCAAGTCACCACAGGGCCAGCTGCTTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCGATCGAATTGGCTATTaGAGCTTGTGTATGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPDRIGY*SLCMLH
Trigger: GTGAAGCATACACAAGCTTCAATAGCCAATTCGATC...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCATCCCAAGTGGGTTTTaGTTGAGTCCTGTTTTAGCT +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPIPSGF*LSPVLA
Trigger: AGCTAAAACAGGACTCAATCAAAACCCACTTGGGAT...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGGGGGAGGTCATCCTCTaGAGTTGGGGACTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWGEVIL*SWGLKD
Trigger: GTCCTTCAGTCCCCAACTGCAGAGGATGACCTCCCC...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCGTTTTCCAAAGTGGCTaGACCATTTTACATTCCCAC +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPVFQSG*TILHSH
Trigger: GTGGGAATGTAAAATGGTGCAGCCACTTTGGAAAAC...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTTGTTTTTGAGCACTTaGTTAGTTTCTGGTACTACA +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVLFLST*LVSGTT
Trigger: TGTAGTACCAGAAACTAAGCAAGTGCTCAAAAACAA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGAAAGGGAATGGCTTGTaGTGCTGCTTTCATCTAAAG +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLKGNGL*CCFHLK
Trigger: CTTTAGATGAAAGCAGCAGCACAAGCCATTCCCTTT...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTCTTTCGGCGCCTACTaGGAGATGTCTCCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTSFGAY*EMSPSQ
Trigger: CTGACTGGGAGACATCTCCCAGTAGGCGCCGAAAGA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGCAGACCCTGTTTGCCTaGGTGTCACCAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWQTLFA*VSPVEA
Trigger: AGCCTCCACTGGTGACACCCAGGCAAACAGGGTCTG...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCGCCCCCATTCTCTTCTaGCTTGTAGGGTTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTAPILF*LVGFLP
Trigger: GGGCAGAAACCCTACAAGCCAGAAGAGAATGGGGGC...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGGCTGAGTTCAAGTCCTaGATATCTTTGTTAATTTTC +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVAEFKS*ISLLIF
Trigger: GAAAATTAACAAAGATATCCAGGACTTGAACTCAGC...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGGCTTTTGAATTTGTTTaGTCTTGCTTCTCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVAFEFV*SCFSSS
Trigger: AGAACTAGAGAAGCAAGACCAAACAAATTCAAAAGC...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCCTGGAGCATGCTTCTTaGCCTGGATGGCAAAGTCCC +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTLEHAS*PGWQSP
Trigger: GGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAG...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCAATATTAGCTGGGTATaGTGGTACGTGCCTATAGTC +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPNISWV*WYVPIV
Trigger: GACTATAGGCACGTACCACCATACCCAGCTAATATT...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCGCTTTCCCAGCCATGTaGAACTGTGAGTCAATTAAA +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPAFPAM*NCESIK
Trigger: TTTAATTGACTCACAGTTCCACATGGCTGGGAAAGC...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TGCCTGATTGCCCTGGCCAGAACTTCCAATACTATGTaGAATAGGAGTGGTGAGAGAGGGCATCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: CLIALARTSNTM*NRSGERGHPCL
Trigger: AAGGCAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTATTGGAAGTTCTGGCCAGGGCAATCAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGTCTAGTGCGGTGGTGTaGTCTTGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWSSAVV*SWLTAT
Trigger: GGTTGCAGTGAGCCAAGATCACACCACCGCACTAGA...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCGGCTATAGTGAGCTATaGCTGTCACTGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTGYSEL*LSLCSS
Trigger: GCTGGAGCACAGTGACAGTCATAGCTCACTATAGCC...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGGGTGGGAGGATCGCTTaGGGCCAGGAGTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMGGRIA*GQESEA
Trigger: AGCCTCAGACTCCTGGCCTCAAGCGATCCTCCCACC...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCAGTCCTCCTGCCTCTaGCTCCAAAGTGCTAGAACT +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYIQSSCL*LQSART
Trigger: AGTTCTAGCACTTTGGAGGCAGAGGCAGGAGGACTG...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCAATGCTTCCAGCTTTTaGCCATTCAGTATGCTATTG +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPNASSF*PFSMLL
Trigger: CAATAGCATACTGAATGGGCAAAAGCTGGAAGCATT...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGTCAGATGGATATATTaGAAAAATGTTCTCCCATTC +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQVRWIY*KNVLPF
Trigger: GAATGGGAGAACATTTTTGCAATATATCCATCTGAC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATTGCCCAGGCTGGAGTaGACTGGCACAGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKLPRLE*TGTVTA
Trigger: AGCTGTGACTGTGCCAGTGCACTCCAGCCTGGGCAA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCATGCACACTGGAGCATaGTTCTTGGCCTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYIMHTGA*FLAWMA
Trigger: TGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCAT...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGCCCCACGCAGTCACTaGCCCACACCTTATCCTTCA +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKAPRSH*PTPYPS
Trigger: TGAAGGATAAGGTGTGGGGCAGTGACTGCGTGGGGC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGCAGCCTCTAAAGGGCTaGTTGGTGGGTTCACGGTCT +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWQPLKG*LVGSRS
Trigger: AGACCGTGAACCCACCAAGCAGCCCTTTAGAGGCTG...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGTGCACTTCTCCTTCCTaGCGCCCTGTGAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWCTSPS*RPVKKV
Trigger: CACCTTCTTCACAGGGCGGCAGGAAGGAGAAGTGCA...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCTTGGTTATTCTTGTTaGAGTAATGATTCTCCTCTA +
Preference number: 4 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQLGYSC*SNDSPL
Trigger: TAGAGGAGAATCATTACTCCAACAAGAATAACCAAG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp GTTGAACCAGCCTTGCATCCCAGGGAAGAAGCTGACTaGATCGTGGTGGATAAGCTTTTTGATATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VEPALHPREEAD*IVVDKLFDMLL
Trigger: CAGCAGCATATCAAAAAGCTTATCCACCACGATCAAGTCAGCTTCTTCCCTGGGATGCAAGGCTGGTTCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTCTGCAGTTGGGGACTaGAGGACTGGGAGATGGGAG +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFSAVGD*RTGRWE
Trigger: CTCCCATCTCCCAGTCCTTCAGTCCCCAACTGCAGA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTGTTATGTGGGAATTTaGTCCTGTCATTATGATGCT +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPCYVGI*SCHYDA
Trigger: AGCATCATAATGACAGGATCAAATTCCCACATAACA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAGGCAGGAGGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIGRRIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCTCCTGCC...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCCCTTCACTTTGGTTATaGCTGCAGAGGTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTPSLWL*LQRCWE
Trigger: TTCCCAGCACCTCTGCAGTCATAACCAAAGTGAAGG...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCCCTCAACTGCTAACTTaGCTACCTGATAAACATTTT +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPPQLLT*LPDKHF
Trigger: AAAATGTTTATCAGGTAGGCAAGTTAGCAGTTGAGG...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTCCATGGTATACATGTaGCACATTTTCTTAATCCAG +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPSMVYM*HIFLIQ
Trigger: CTGGATTAAGAAAATGTGGCACATGTATACCATGGA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCGTTCTGGGTTACATGTaGAGAACATGTAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPVLGYM*RTCSFV
Trigger: AACAAAACTACATGTTCTGCACATGTAACCCAGAAC...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGGGTATGTTGGTGCCTaGCTGCAGTCCCAGTTACTG +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKGYVGA*LQSQLL
Trigger: CAGTAACTGGGACTGCAGGCAGGCACCAACATACCC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTTATCCTTCAGCTTGTaGTGCACAGGAGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTLSFSL*CTGEEW
Trigger: CCACTCCTCTCCTGTGCAGCACAAGCTGAAGGATAA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTTACAAAGAGGAAAATaGATCATGATCAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPLQRGK*IMISGS
Trigger: AGACCCACTGATCATGATGCATTTTCCTCTTTGTAA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGAGAGCTAATTACTGGTaGAGCCAAGAAGAGAAATTA +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLRANYW*SQEEKL
Trigger: TAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCT...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGTTAAGAAGCTTAGTTTaGCTGGATATGAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLLRSLV*LDMRFW
Trigger: CCAGAATCTCATATCCAGCCAAACTAAGCTTCTTAA...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCATACACATGCCATGGTaGTTTGCTGCACCCACCAAC +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYIIHMPW*FAAPTN
Trigger: GTTGGTGGGTGCAGCAAACCACCATGGCATGTGTAT...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGAGCCTCTCAAGTAGCTaGGACTACAGGTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWSLSSS*DYRCAA
Trigger: TGCTGCACACCTGTAGTCCCAGCTACTTGAGAGGCT...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGATTCCTGAGCTCAAGTaGTCCACCCTCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWIPELK*STLLGF
Trigger: GAAGCCAAGGAGGGTGGACCACTTGAGCTCAGGAAT...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGGCCCTGTGGTGACTTaGTGGCAGTTGTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFGPVVT*WQLSTW
Trigger: CCAAGTGGACAACTGCCACCAAGTCACCACAGGGCC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGCATGCTTCTTGGCCTaGATGGCAAAGTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKACFLA*MAKSQE
Trigger: CTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGAGCTACTCAGGAAGCTaGGGCAGGAGAAATGCTTCA +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWSYSGS*GRRNAS
Trigger: TGAAGCATTTCTCCTGCCTCAGCTTCCTGAGTAGCT...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGTGTTCAGATATGCCCTaGCCCTGGAGGTGGAATCTA +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWCSDMP*PWRWNL
Trigger: TAGATTCCACCTCCAGGGGCAGGGCATATCTGAACA...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATGCTGGGAGAACCACTaGTCTCTTCAGAGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKCWENH*SLQSCQ
Trigger: CTGACAGCTCTGAAGAGAGCAGTGGTTCTCCCAGCA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGGAGAGAGGGCATCCTTaGCTTGTGCTGGTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWERGHP*LVLVFK
Trigger: TTTGAAGACCAGCACAAGGCAAGGATGCCCTCTCTC...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTTGAATATGCTTTATTaGTTTCTCTTGCCTGATTGC +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPLNMLY*FLLPDC
Trigger: GCAATCAGGCAAGAGAAAGCAATAAAGCATATTCAA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTGTATGGGAGGCAGATaGAGCACCCTCCCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFCMGGR*STLPKQ
Trigger: CTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCACCACCAGACCATCATaGCGGCTAGAATTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTTTRPS*RLEFQK
Trigger: TTTCTGGAATTCTAGCCGCCATGATGGTCTGGTGGT...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCGGCATGTTTTTGCAGTaGCTGGTACTGGTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTGMFLQ*LVLVVP
Trigger: AGGAACAACCAGTACCAGCCACTGCAAAAACATGCC...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTGTCTTTGTTCTCGTTaGTTCCAAAGAACATCTTTA +
Preference number: 4 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPCLCSR*FQRTSL
Trigger: TAAAGATGTTCTTTGGAACCAACGAGAACAAAGACA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGTTCAGAACCTGTTACTaGTTTATTCAGAGATTCAAC +
Preference number: 4 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLFRTCY*FIQRFN
Trigger: GTTGAATCTCTGAATAAACCAGTAACAGGTTCTGAA...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TTCTCTGTCCAGTTTTGTTCCCTTGCTGGCAAGGAGTaGTGTTCCTTTGGAGGAGAAGAGGCATTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FSVQFCSLAGKE*CSFGGEEAFWF
Trigger: AAACCAGAATGCCTCTTCTCCTCCAAAGGAACACAACTCCTTGCCAGCAAGGGAACAAAACTGGACAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp CCTTGTGCTGGTCTTCAAAGGAAATGCTTCCAGCTTTaGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: PCAGLQRKCFQL*PIQYAIGCGFV
Trigger: GACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCATTTCCTTTGAAGACCAGCACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp ATTGCTGGGTCAAATGGTATTTCCAGTTCTAGATCCTaGAGGAGTCGTCACACTGACTTCCACAATGGTCGG +
Preference number: 4 (lower is better)
Translates to: IAGSNGISSSRS*RSRHTDFHNGR
Trigger: CCGACCATTGTGGAAGTCAGTGTGACGACTCCTCAAGGATCTAGAACTGGAAATACCATTTGACCCAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCATGCAGTTGTGCAGTTaGGTGAGATTCTTGATCCTG +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYIMQLCS*VRFLIL
Trigger: CAGGATCAAGAATCTCACTCAACTGCACAACTGCAT...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAATGAGCTTGGTTGGGTaGAGGGTCACCCAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKMSLVG*RVTQKR
Trigger: TCTTTTCTGGGTGACCCTTCACCCAACCAAGCTCAT...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGCTTTCCCTCTGGCGGTaGCCCTTGTTCTGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMLSLWR*PLFCKG
Trigger: TCCTTTGCAGAACAAGGGTCACCGCCAGAGGGAAAG...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCGGAACATCTTCAAGCTaGGAAAGGGTCTCTAGGAAA +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYIGTSSS*ERVSRK
Trigger: TTTCCTAGAGACCCTTTCTCAGCTTGAAGATGTTCC...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATGTCTGTTTAGTACCTaGGGCTTTTCGAGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKCLFST*GFSRAA
Trigger: CGCTGCTCTCGAAAAGCCGCAGGTACTAAACAGACA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATTCCCAGGTGAGGCGATaGCCCACCTTGCTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYSQVRR*PTLLRL
Trigger: TAGCCGAAGCAAGGTGGGGCATCGCCTCACCTGGGA...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAACTCCAGACCCTGTTTaGCTGGGTGTCACCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYITPDPV*LGVTSG
Trigger: TCCACTGGTGACACCCAGGCAAACAGGGTCTGGAGT...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTTTATTGCTTTCTCTTaGCTGATTGCCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYIFIAFS*LIALAR
Trigger: TCTGGCCAGGGCAATCAGGCAAGAGAAAGCAATAAA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAACCAAAAGATCCCTTGTaGCCATCTGCAGGCAATCCA +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKPKDPL*PSAGNP
Trigger: TGGATTGCCTGCAGATGGGCACAAGGGATCTTTTGG...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTAGGTGTGAGCCCCTGTaGCTGGCTAGCTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFRCEPL*LASFFF
Trigger: GAAAAAGAAGCTAGCCAGGCACAGGGGCTCACACCT...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATGTCACCCCTGCTCCTTaGCCCACCCTCAGTCCAACA +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYVTPAP*PTLSPT
Trigger: TGTTGGACTGAGGGTGGGGCAAGGAGCAGGGGTGAC...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGCACTTTGGTTATGACTaGAGAGGTGCTGGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWHFGYD*RGAGKQ
Trigger: TTGCTTCCCAGCACCTCTGCAGTCATAACCAAAGTG...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATACCTGGGTGTCACCAGTaGAGGCTGCAGAACAGCAAA +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIPGCHQ*RLQNSK
Trigger: TTTGCTGTTCTGCAGCCTCCACTGGTGACACCCAGG...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAGCAGTGGTGCAATCTTaGCTCCCTACAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIAVVQS*LPTTSA
Trigger: GGCAGAGGTTGTAGGGAGCCAAGATTGCACCACTGC...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAACCTTATGAGCTTGGTTaGGTGAAGGGTCACCCAGAA +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKPYELG*VKGHPE
Trigger: TTCTGGGTGACCCTTCACCCAACCAAGCTCATAAGG...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCGAGTCCAGAAAGTTCTaGGATTTTCCTGTTTTGGAC +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYIESRKF*DFPVLD
Trigger: GTCCAAAACAGGAAAATCTCAGAACTTTCTGGACTC...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATCCAGAAAGTTTAGGTaGCTGGGCCACAGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKSRKFR*LGHRAN
Trigger: ATTAGCTCTGTGGCCCAGTCACCTAAACTTTCTGGA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTGCTTGGTCCAGAGCTaGGTTCAAGTCCTGGATATC +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFCLVQS*VQVLDI
Trigger: GATATCCAGGACTTGAACTCAGCTCTGGACCAAGCA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCTGTGGGATCAGTGGTaGTATCCCCTTTATCATTTT +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYILWDQW*YPLYHF
Trigger: AAAATGATAAAGGGGATATCACCACTGATCCCACAG...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATCCCACCTCAGCCTTCTaGGTAGCCAGGACTACAGGA +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYPTSAF*VARTTG
Trigger: TCCTGTAGTCCTGGCTACTCAGAAGGCTGAGGTGGG...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTCCAGCACAGTACTTTaGACTGAATTCTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYISSTVL*TEFCFS
Trigger: ACTGAAGCAGAATTCAGTTCAAAGTACTGTGCTGGA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAACCTTTATTGCCAACATaGGTAGCTGGCTTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKPLLPT*VAGFLG
Trigger: CCCAAGAAAGCCAGCTACTCATGTTGGCAATAAAGG...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGCAGTTTGAGCTTCCCTaGTGCTTTGTTTACACTGTG +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWQFELP*CFVYTV
Trigger: CACAGTGTAAACAAAGCAGCAGGGAAGCTCAAACTG...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGGAGAAGCTGTCTGCTaGCTTTTGTTCAGATATGCC +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKGEAVC*LLFRYA
Trigger: GGCATATCTGAACAAAAGGCAGCAGACAGCTTCTCC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTCTGGAGAAGCTGTCTaGTGCCTTTTGTTCAGATAT +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYISGEAV*CLLFRY
Trigger: ATATCTGAACAAAAGGCAGCAGACAGCTTCTCCAGA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTATGTTGAACCAGCCTTaGATCCCAGGGAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFMLNQP*IPGKKL
Trigger: CAGCTTCTTCCCTGGGATGCAAGGCTGGTTCAACAT...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTTTGTACCAGTGCCATaGTGTTTTGGTTACTGTAGG +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTFVPVP*CFGYCR
Trigger: CCTACAGTAACCAAAACAGCATGGCACTGGTACAAA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCACAGTCACAGCTAACTaGAGCCTCAACCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFTVTAN*SLNLPS
Trigger: GCTTGGGAGGTTGAGGCTGCAGTTAGCTGTGACTGT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTCTGGTACTACAAGATaGTCCAGGCTTATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYISGTTR*SRLILH
Trigger: ATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAACTCAGACTCTGGCCTaGCTAGGTACATTTCAGATG +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKTQTLA*LGTFQM
Trigger: CATCTGAAATGTACCTAGGCAGGCCAGAGTCTGAGT...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGAAGCTTCGTTCCAGTaGGGCATCTACCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFEASFQ*GIYLSE
Trigger: CTCAGAGAGGTAGATGCCCCACTGGAACGAAGCTTC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCAATTTTCAGCCTTTCTaGTCTGGTTTCTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYINFQPF*SGFSPS
Trigger: AGATGGGGAGAAACCAGACCAGAAAGGCTGAAAATT...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGGAGTTGTGTTCCTTTaGAGGAGAAGAGGCATTCTG +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKGVVFL*RRRGIL
Trigger: CAGAATGCCTCTTCTCCTCCAAAGGAACACAACTCC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCAAGAATGTTGAATATTaGCCCCCATTCTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYIKNVEY*PPFSSG
Trigger: GCCAGAAGAGAATGGGGGCCAATATTCAACATTCTT...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCACTTCTCTTCTCATaGAATAGCAGGATCATATGG +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYIPLLFS*NSRIIW
Trigger: CCATATGATCCTGCTATTCCATGAGAAGAGAAGTGG...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGTGAGCCCCTGTGCCTaGCTAGCTTCTTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFVSPCA*LASFSL
Trigger: AAGAGAAAAAGAAGCTAGCCAGGCACAGGGGCTCAC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGCAATCAGCCCATCTTaGCTTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFAISPS*LPKVLG
Trigger: TCCCAGCACTTTGGGAAGCCAAGATGGGCTGATTGC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTTACAGTACCTGAAGTaGACACTGCTTTGGCTGTAT +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYILQYLK*TLLWLY
Trigger: ATACAGCCAAAGCAGTGTCCACTTCAGGTACTGTAA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TTCTGTCAACTTGTCAAACTCATTCTCTGTCCAGTTTaGTTCCCTTGCTGGCAAGGAGTTGTGTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: FCQLVKLILCPV*FPCWQGVVFLW
Trigger: CCAAAGGAACACAACTCCTTGCCAGCAAGGGAACAAAACTGGACAGAGAATGAGTTTGACAAGTTGACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TACCATTTGGCATGTTTTTGCAGTGGCTGGTACTGGTaGTTCCTGTCCATTTTAGTGCTTACTTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: YHLACFCSGWYW*FLSILVLTSGA
Trigger: AGCTCCTGAAGTAAGCACTAAAATGGACAGGAACAACCAGTACCAGCCACTGCAAAAACATGCCAAATGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCACCAGGTACTTTAGTTaGAAATGCAGAAATCACCCA +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTTRYFS*KCRNHP
Trigger: TGGGTGATTTCTGCATTTTCAACTAAAGTACCTGGT...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTGCTTTCTCTTGCCTaGTTGCCCTGGCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYILLSLA*LPWPEL
Trigger: AAGTTCTGGCCAGGGCAATCAGGCAAGAGAAAGCAA...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGTCGTGGTCTGCCAGTTaGGAAGACTGTGGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMSWSAS*EDCGKR
Trigger: TCTTTTCCCACAGTCTTCGCAACTGGCAGACCACGA...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATTTGAGCTTCCCTGCTaGTTTGTTTACACTGTGAGC +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKFELPC*FVYTVS
Trigger: GCTCACAGTGTAAACAAAGCAGCAGGGAAGCTCAAA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTTTCTCTTGCCTGATTaGCCTGGCCAGAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFFLLPD*PGQNFQ
Trigger: TTGGAAGTTCTGGCCAGGGCAATCAGGCAAGAGAAA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAACTTGGCTTCCGAAAGTaGAGGGATTTCAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKLGFRK*RDFRCE
Trigger: TTCACATCTGAAATCCCTGCACTTTCGGAAGCCAAG...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTTTGACTTCAGAGTATaGAACATAGTGAGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTFDFRV*NIVRPH
Trigger: ATGAGGCCTCACTATGTTGCATACTCTGAAGTCAAA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGAGACATAGGGAGTTTTaGAAGCCCCAAGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMRHREF*KPQGSP
Trigger: TGGACTCCCTTGGGGCTTGCAAAACTCCCTATGTCT...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCCAAATTCTCGTAACTTaGCAGTGGTTTAATGGCTGT +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTQILVT*QWFNGC
Trigger: ACAGCCATTAAACCACTGCCAAGTTACGAGAATTTG...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCAGTGGGCTGCTTTCTaGTCCTTTTCCATGATTGGG +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFQWAAF*SFSMIG
Trigger: CCCAATCATGGAAAAGGACCAGAAAGCAGCCCACTG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAGAAAAGAGCAGTATTTaGGCAGGAGTGTACCCCTCC +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIEKSSI*AGVYPS
Trigger: GGAGGGGTACACTCCTGCCCAAATACTGCTCTTTTC...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGTTTTGTTCCCTTGCTaGCAAGGAGTTGTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKVLFPC*QGVVFL
Trigger: AAGGAACACAACTCCTTGCCAGCAAGGGAACAAAAC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGGAGTGTTTTCAAACTTaGTTCTGTTCTCCCCATCAC +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWECFQT*FCSPHH
Trigger: GTGATGGGGAGAACAGAACCAAGTTTGAAAACACTC...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTATATTCTGTTGATTTaGGGTGGAGAGTTCTGTCGA +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTYILLI*GGEFCR
Trigger: TCGACAGAACTCTCCACCCCAAATCAACAGAATATA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTCTCTGTTGTCCAGTCTaGTCTCAAATTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFLCCPV*SQIPEL
Trigger: GAGCTCAGGAATTTGAGACCAGACTGGACAACAGAG...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAGGAGCTCTTTCAGATTaGCTCCTGTGTCTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIGALSD*LLCLSD
Trigger: GTCAGACAGACACAGGAGCCAATCTGAAAGAGCTCC...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTTAAAAAGACTCCACTaGCCAGGTGCGGTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFLKRLH*PGAVVH
Trigger: GTGAACCACCGCACCTGGCCAGTGGAGTCTTTTTAA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp AGTTTTGTTCCCTTGCTGGCAAGGAGTTGTGTTCCTTaGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTT +
Preference number: 4 (lower is better)
Translates to: SFVPLLARSCVP*EEKRHSGFWNF
Trigger: AAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAACACAACTCCTTGCCAGCAAGGGAACAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TGCACACCGATTTTGTATCCTGAGACTTTGCTGAAGTaGCTTATCAGCTTAAGGAGATTTTGGGATGAGACG +
Preference number: 4 (lower is better)
Translates to: CTPILYPETLLK*LISLRRFWDET
Trigger: CGTCTCATCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCGGTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCTGGTTCTGGGAACTTaGGTCTATCAGTGGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFLVLGT*VYQWKG
Trigger: ACCTTTCCACTGATAGACTCAAGTTCCCAGAACCAG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGTCTCCCAATGTAATCTaGAGAGGAACCAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMSPNVI*RGTRSP
Trigger: TGGGCTTCTGGTTCCTCTTCAGATTACATTGGGAGA...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAACATGCCCAGCCCTCTTaGATGTTTTATAGTTTTCGT +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKHAQPS*MFYSFR
Trigger: ACGAAAACTATAAAACATTCAAGAGGGCTGGGCATG...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGCCTTCTGCTAGCTTTTaGATTTGTTTGGTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWPSASF*ICLVLL
Trigger: AAGCAAGACCAAACAAATTCAAAAGCTAGCAGAAGG...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCCAAACAGAGACAATTTaGCTTCCTCTCTTCCTATTT +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTQTETI*LPLFLF
Trigger: AAATAGGAAGAGAGGAAGTCAAATTGTCTCTGTTTG...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATGGACTCTGTTCCACTaGTCTGTATGCCTATCTTTA +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKWTLFH*SVCLSL
Trigger: TAAAGATAGGCATACAGATCAGTGGAACAGAGTCCA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAACTACGAGTCTTGATGTaGACACATTTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKLRVLM*THFHFS
Trigger: AGAGAAGTGGAAATGTGTTCACATCAAGACTCGTAG...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGGCTCCTGTGTCTGTCTaGCATGCTTCTATCCTTTTG +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMAPVSV*HASILL
Trigger: CAAAAGGATAGAAGCATGTCAGACAGACACAGGAGC...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAACACAGTATTTTTGCTaGGGGAAGGACAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYITQYFC*GKDRQR
Trigger: CCTTTGCCTGTCCTTCCCTCAGCAAAAATACTGTGT...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGAGGAAAATGCATCATaGTCAGTGGGTCTTATCCCA +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFEENAS*SVGLIP
Trigger: TGGGATAAGACCCACTGATCATGATGCATTTTCCTC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTCTTGCTCATTGTCACTaGTACTATCACTGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFLAHCH*YYHCEC
Trigger: GCACTCACAGTGATAGTAGCAGTGACAATGAGCAAG...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGTCACCAGTGGAGGCTaGAGAACAGCAAATATTGCT +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFVTSGG*RTANIA
Trigger: AGCAATATTTGCTGTTCTGCAGCCTCCACTGGTGAC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTCATTTGGCATGTTTTTaGAGTGGCTGGTACTGGTTG +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFHLACF*SGWYWL
Trigger: CAACCAGTACCAGCCACTGCAAAAACATGCCAAATG...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGGTGGAGATGGCATTTTaGTCTGTTGTCCAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMVEMAF*SVVQSG
Trigger: ACCAGACTGGACAACAGAGCAAAATGCCATCTCCAC...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGAGGCATTCTGGTTTTTaGAATTTTCAGCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWRHSGF*NFQPFW
Trigger: CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCT...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGCATGCTCCTTTAGCTTaGAGAAGTTTGTTATTACCG +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWHAPLA*RSLLLP
Trigger: CGGTAATAACAAACTTCTCCAAGCTAAAGGAGCATG...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGATGGTCTTTACCATTTaGCATGTTTTTGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWMVFTI*HVFAVA
Trigger: AGCCACTGCAAAAACATGCCAAATGGTAAAGACCAT...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCTGAAGAGATATCTCTaGGCACAGAGAGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFLKRYL*AQRGKK
Trigger: CTTCTTCCCTCTCTGTGCCCAGAGATATCTCTTCAG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATTCCCTAATCCCAAGTaGGTTTTGATTGAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKFPNPK*VLIESC
Trigger: ACAGGACTCAATCAAAACCCACTTGGGATTAGGGAA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp GCAGGCCTGGTGGTGACAAAATCTCTCAGCATTTGCTaGTCTGTAAAGGATTTTATTTCTCCTTCACTTAAG +
Preference number: 4 (lower is better)
Translates to: AGLVVTKSLSIC*SVKDFISPSLK
Trigger: CTTAAGTGAAGGAGAAATAAAATCCTTTACAGACAAGCAAATGCTGAGAGATTTTGTCACCACCAGGCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp ATGCAGTTTCTTCATAGTGTTGATGGTCTTTACCATTaGGCATGTTTTTGCAGTGGCTGGTACTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: MQFLHSVDGLYH*ACFCSGWYWLF
Trigger: GAACAACCAGTACCAGCCACTGCAAAAACATGCCAAATGGTAAAGACCATCAACACTATGAAGAAACTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TGTCTGACATGCTTCTATCCTTTTGTTTTTGAGCACTaGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: CLTCFYPFVFEH*LSFWYYKMLQA
Trigger: AGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCTCAAAAACAAAAGGATAGAAGCATGTCAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGGTTAGCTGTTCTTGTTaGATTGATCCCTTTACCATT +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWVSCSC*IDPFTI
Trigger: AATGGTAAAGGGATCAATTCAACAAGAACAGCTAAC...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAAATCCAGTCTATCATTaGCGGGCATTTGGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYINPVYH*RAFGLV
Trigger: AACCAACCCAAATGCCCGTCAATGATAGACTGGATT...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGGAAAGGTGGAATCATaGTCTTCTGAGTCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFGKVES*SSESCD
Trigger: ATCACAAGACTCAGAAGAGCATGATTCCACCTTTCC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGTCTCTTTGTAGAACTTaGTTTATGAATCTGGGTGCT +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWSLCRT*FMNLGA
Trigger: AGCACCCAGATTCATAAAGCAAGTTCTACAAAGAGA...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTGATGAGAGTGCATaGACACTGGAGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIFDESA*TLEHAS
Trigger: AGAAGCATGCTCCAGTGTGCATGCACTCTCATCAAA...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGCCAAGAGTATTTTCTTaGCCTTCCAGTAAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMPRVFS*PSSKAP
Trigger: GGGAGCTTTACTGGAAGGCCAAGAAAATACTCTTGG...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGAATTTGATTGCATTGTaGTCTGAGACGGTTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWNLIAL*SETVCC
Trigger: ACAACAAACCGTCTCAGACCACAATGCAATCAAATT...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTTTGGGATGAGACGATaGGGTTTTCTAAATATACAA +
Preference number: 4 (lower is better)
Translates to: GDWATELITGGAKKRNYIFGMRR*GFLNIQ
Trigger: TTGTATATTTAGAAAACCCCATCGTCTCATCCCAAA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTAGCTTAAGGAGATTTTaGGATGAGACGATGGGGTTT +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFSLRRF*DETMGF
Trigger: AAACCCCATCGTCTCATCCCAAAATCTCCTTAAGCT...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGATCTATAAATCAGTTTaGGCAACAAGGCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWIYKSV*ATRPLS
Trigger: TGACAATGGCCTTGTTGCCCAAACTGATTTATAGAT...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCACAGTTTTCTGCATATaGCTAGCCCGTTTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFTVFCI*LARFPN
Trigger: GTTGGGAAAACGGGCTAGCCATATGCAGAAAACTGT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATGGCAGTTGTCCACTTaGATCCTTAGTTTCTATACT +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKWQLST*ILSFYT
Trigger: AGTATAGAAACTAAGGATCCAAGTGGACAACTGCCA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCCAAACAGAAAAATTCTaGACCTTAAAACCAATGCGT +
Preference number: 4 (lower is better)
Translates to: WATELITGGAKKRNYIPTQTEKF*TLKPMR
Trigger: ACGCATTGGTTTTAAGGTCCAGAATTTTTCTGTTTG...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGAATTCCAGAAACGGTaGATAGAAGTTCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKEFQKR*IEVHLL
Trigger: TAGAAGATGAACTTCTATTCACCGTTTCTGGAATTC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATTTAAAGCATTTCCTTaGGTCCAGAAAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKFKAFP*VQKVLR
Trigger: TCTCAGAACTTTCTGGACTCAAGGAAATGCTTTAAA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGCTCACTGATGGGTCTTaGCTGTTTATTCAATTTGCC +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMLTDGS*LFIQFA
Trigger: GGCAAATTGAATAAACAGTCAAGACCCATCAGTGAG...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTACATCCTTTTATTCTaGGCCTATGTGTGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFYILLF*AYVCLC
Trigger: GCAAAGACACACATAGGCTCAGAATAAAAGGATGTA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATGAGTCCAGAATTTCCTaGACATGTTGCAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYESRIS*TCCKVA
Trigger: AGCCACCTTGCAACATGTTCAGGAAATTCTGGACTC...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAGAATCTTTTCCCCATTaGTTGTGTGTGTCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIESFPH*LCVSGL
Trigger: CAAACCTGACACACACAAGCAATGGGGAAAAGATTC...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGAGGGTTTTGCTATGTTaGCCAAGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMRVLLC*PSWSQT
Trigger: AGTTTGAGACCAACTTGGGCAACATAGCAAAACCCT...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATACTATCAGTGGAAAGGTaGAATCATGCTCTTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYILSVER*NHALLS
Trigger: ACTCAGAAGAGCATGATTCCACCTTTCCACTGATAG...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTGTGGTTTTTGCCGTTaGTTCTGTTTATGTGATGGA +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFCGFCR*FCLCDG
Trigger: TCCATCACATAAACAGAACCAACGGCAAAAACCACA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAATTGAGATAATCATGTaGTTTTTGCCGTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKIEIIM*FLPLVL
Trigger: CAGAACCAACGGCAAAAACCACATGATTATCTCAAT...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATGCCTATGTCCTGAATaGTATTGCCCAGGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYICLCPE*YCPGFL
Trigger: AAGAAAACCTGGGCAATACCATTCAGGACATAGGCA...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGAGAACATGCGTTGTTTaGTTTTCTGATCTTGTGATA +
Preference number: 4 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWRTCVV*FSDLVI
Trigger: TATCACAAGATCAGAAAACCAAACAACGCATGTTCT...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATAAGTGGACACTGCTTTaGCTGTATGACCCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYKWTLL*LYDPSK
Trigger: CTTACTGGGGTCATACAGCCAAAGCAGTGTCCACTT...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAGAAGAAAATCTTATCTaGATGCCCAACCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIEENLI*MPNPDK
Trigger: CTTGTCTGGGTTGGGCATCCAGATAAGATTTTCTTC...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp AAGTGTGATGTGGTGCTGACAAGAATGTATATTCTGTaGATTTGGGGTGGAGAGTTCTGTCGATGTCTATTA +
Preference number: 4 (lower is better)
Translates to: KCDVVLTRMYIL*IWGGEFCRCLL
Trigger: TAATAGACATCGACAGAACTCTCCACCCCAAATCAACAGAATATACATTCTTGTCAGCACCACATCACACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TGTGTAGAGGTGTTTATAGTATTCGCTGATGGTAGTTaGTATTTCTGTGGGATCAGTGGTGATATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: CVEVFIVFADGS*YFCGISGDIPF
Trigger: AAAGGGGATATCACCACTGATCCCACAGAAATACAAACTACCATCAGCGAATACTATAAACACCTCTACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp CACCATTTATTAAATAGGGAATCTTTTCCCCATTGCTaGTGTGTGTCAGGTTTGTCAAAGATCAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: HHLLNRESFPHC*CVSGLSKIRWW
Trigger: CCACCATCTGATCTTTGACAAACCTGACACACACAAGCAATGGGGAAAAGATTCCCTATTTAATAAATGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTTGATCTTCAGTTACTaGTATCCTTTCTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFLIFSY*YPFFHL
Trigger: CAAGTGGAAGAAAGGATATCAGTAACTGAAGATCAA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCATAAGCTTTTTGATATaGTGCTGGATTCGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFISFLI*CWIRFA
Trigger: GGCAAACCGAATCCAGCAGCATATCAAAAAGCTTAT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAACTGACCTAGACACTTaGTTTGATTTGGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKTDLDT*FDLANF
Trigger: AAAATTTGCCAAATCAAACCAAGTGTCTAGGTCAGT...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp GTGAGATTCTTGATCCTGAGTTCTAATTTGATTGCATaGTGGTCTGAGACGGTTTGTTGTGATTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: VRFLILSSNLIA*WSETVCCDFCS
Trigger: AGAACAGAAATCACAACAAACCGTCTCAGACCACAATGCAATCAAATTAGAACTCAGGATCAAGAATCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp GTTAGGGTGTTGATTTTAGATCACTCCTGCTTTCACTaGTGGGCATTTAGTGCTATAAATTTCCCTCTACAT +
Preference number: 4 (lower is better)
Translates to: VRVLILDHSCFH*WAFSAINFPLH
Trigger: ATGTAGAGGGAAATTTATAGCACTAAATGCCCACAAGTGAAAGCAGGAGTGATCTAAAATCAACACCCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TGCTTCTCTAGTTCTTTTAATTGTGATGTTAGGGTGTaGATTTTAGATCACTCCTGCTTTCACTTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: CFSSSFNCDVRV*ILDHSCFHLWA
Trigger: TGCCCACAAGTGAAAGCAGGAGTGATCTAAAATCAACACCCTAACATCACAATTAAAAGAACTAGAGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp GTTTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTaGGGAGGGTGTATGTGTCGAGGAATTTATCCATTT +
Preference number: 4 (lower is better)
Translates to: VYSEIQLLPGLV*GGCMCRGIYPF
Trigger: AAATGGATAAATTCCTCGACACATACACCCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp GTATATAGGAATGCTTGTGATTTTTGCACACCGATTTaGTATCCTGAGACTTTGCTGAAGTTGCTTATCAGC +
Preference number: 4 (lower is better)
Translates to: VYRNACDFCTPI*YPETLLKLLIS
Trigger: GCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCGGTGTGCAAAAATCACAAGCATTCCTATATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TTTAAGTTCTGGGTTACATGTGCAGAACATGTAGTTTaGTTACATAGGTATACACATGCCATGGTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: FKFWVTCAEHVV*LHRYTHAMVVC
Trigger: GCAAACCACCATGGCATGTGTATACCTATGTAACAAAACTACATGTTCTGCACATGTAACCCAGAACTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATCTGCTACTATCACTGTaGGTGCTAGAAGAACTAGAT +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYLLLSL*VLEELD
Trigger: ATCTAGTTCTTCTAGCACTCACAGTGATAGTAGCAG...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGTTGGAGTTAGCTTTGTaGCCAGCTTTCTTTTTCATT +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMLELAL*PAFFFI
Trigger: AATGAAAAAGAAAGCTGGTCACAAAGCTAACTCCAA...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTCCTGGATAATATCCTaGAGAGTGTTTTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFSWIIS*RVFSNL
Trigger: CAAGTTTGAAAACACTCTTCAGGATATTATCCAGGA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATGTAGAACTTGCTTTATaGATCTGGGTGCTCCTGTAT +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYVELAL*IWVLLY
Trigger: ATACAGGAGCACCCAGATTCATAAAGCAAGTTCTAC...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTCTTTTGCATTTGCTaGAGAGTGCTTTACTTCCAA +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIFFCIC*RVLYFQ
Trigger: TTGGAAGTAAAGCACTCTTCAGCAAATGCAAAAGAA...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTGCCAGTATTTTATTaGGGATTTTCGCATCGATGT +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYILPVFY*GFSHRC
Trigger: ACATCGATGCGAAAATCCTCAATAAAATACTGGCAA...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGATCTTTCAGGCAAAGTaGTATTTGAAGAACTCTGAG +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMIFQAK*YLKNSE
Trigger: CTCAGAGTTCTTCAAATAGCACTTTGCCTGAAAGAT...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTTTCTGCTTTCCATTTaGTTGGTAAATCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFFLLSI*LVNLPT
Trigger: TGTAGGAAGATTTACCAAGCAAATGGAAAGCAGAAA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTTTCCCTCTACATACTaGTTTAAACATGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFFPSTY*FKHVLE
Trigger: CTCTAGGACATGTTTAAAGCAGTATGTAGAGGGAAA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTACAATCATGTCATCTaGAAACAGAGACAATTTGAC +
Preference number: 4 (lower is better)
Translates to: STCLVSGTTRCSRLILHFYNHVI*KQRQFD
Trigger: GTCAAATTGTCTCTGTTTGCAGATGACATGATTGTA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATTGTCCTGAATGGTATTaGCCAGGTTTTCTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYCPEWY*PGFLLG
Trigger: TCCTAGAAGAAAACCTGGGCAATACCATTCAGGACA...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCAATGGCTTGTGCTGCTaGTTTCATCTAAAGGTATTT +
Preference number: 4 (lower is better)
Translates to: LGKLTADIVLNGERLSTFNGLCC*FHLKVF
Trigger: AAATACCTTTAGATGAAAGCAGCAGCACAAGCCATT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTCTAATCTGGTTCTaGGAACTTGAGTCTATCAGT +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIFLIWF*ELESIS
Trigger: ACTGATAGACTCAAGTTCCCAGAACCAGATTAGAAA...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATGGAGAAGAGGCATTCTaGTTTTTGGAATTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYGEEAF*FLEFSA
Trigger: GGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCC...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATaGGGTGCATATATATTTAGGATAGTTAGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: CRTCFMNLGAPV*GAYIFRIVSCS
Trigger: AGAACAGCTAACTATCCTAAATATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp GCTTGGTCCAGAGCTGAGTTCAAGTCCTGGATATCTTaGTTAATTTTCTGTCTTGTTGATCTGTCTAATATT +
Preference number: 4 (lower is better)
Translates to: AWSRAEFKSWIS*LIFCLVDLSNI
Trigger: AATATTAGACAGATCAACAAGACAGAAAATTAACAAAGATATCCAGGACTTGAACTCAGCTCTGGACCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp ATTTATAATCTTTTGGGTATATGCCCAATAGTGGGATaGCTGGGTCAAATGGTATTTCCAGTTCTAGATCCT +
Preference number: 4 (lower is better)
Translates to: IYNLLGICPIVG*LGQMVFPVLDP
Trigger: AGGATCTAGAACTGGAAATACCATTTGACCCAGCAATCCCACTATTGGGCATATACCCAAAAGATTATAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATAGTTCTCATGAGATCTaGTGGCTTTATAGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYSSHEI*WLYRGF
Trigger: AAAGCCTCTATAAAGCCATCAGATCTCATGAGAACT...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGAATGCTTGTGATTTTTaGACACCGATTTTGTATCCT +
Preference number: 4 (lower is better)
Translates to: AALNSFSFISTLVNLTIMNACDF*TPILYP
Trigger: AGGATACAAAATCGGTGTGCAAAAATCACAAGCATT...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATACTTCTTCTCCAGAATaGCCACTTTGTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYTSSPE*PLCSSF
Trigger: AAAGGAAGAACAAAGTGGCCATTCTGGAGAAGAAGT...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CCA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTATGTGGTCAATTTTaGAATAAGTGTGATGTGGTG +
Preference number: 4 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYILCGQF*NKCDVV
Trigger: CACCACATCACACTTATTCCAAAATTGACCACATAA...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR TCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATCCTCTCTTATTTCCTTaGGCAGTGCTTTGTATTTTA +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYPLLFP*AVLCIL
Trigger: TAAAATACAAAGCACTGCTCAAGGAAATAAGAGAGG...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR GCA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATGCATTTGCTGAAGAGTaGTTTACTTCCAATTATGTG +
Preference number: 4 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYAFAEE*FTSNYV
Trigger: CACATAATTGGAAGTAAAGCACTCTTCAGCAAATGC...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp TGCATGTGTCTTTATTGTAGAATGATTTATAATCTTTaGGGTATATGCCCAATAGTGGGATTGCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: CMCLYCRMIYNL*GICPIVGLLGQ
Trigger: TTGACCCAGCAATCCCACTATTGGGCATATACCCAAAAGATTATAAATCATTCTACAATAAAGACACATGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
3UTR CAA 72 bp CTGGACTGTAAATGGAAACATACCATATGTGGGATATaGCATCAGACTTCTTTCACTAAGCATAATGTTTTG +
Preference number: 4 (lower is better)
Translates to: LDCKWKHTICGI*HQTSFTKHNVL
Trigger: CAAAACATTATGCTTAGTGAAAGAAGTCTGATGCAATATCCCACATATGGTATGTTTCCATTTACAGTCCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGGGAAAAGAGCAGTATTaGGGCAGGAGTGTACCCCTC +
Preference number: 5 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVGKEQY*GRSVPL
Trigger: GAGGGGTACACTCCTGCCCAAATACTGCTCTTTTCC...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTGGGCTCTGCCCAGTTaGAGCTTCCCTGCTGCTTTG +
Preference number: 5 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPWALPS*SFPAAL
Trigger: CAAAGCAGCAGGGAAGCTCAAACTGGGCAGAGCCCA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTGCGGTGGTGTGATCTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPCGGVI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGATCACACCACCGCA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCACTGGAGCATGCTTCTaGGCCTGGATGGCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPTGACF*AWMAKS
Trigger: GGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGT...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCAGATACTCTGGAGGTaGAGGTGGGAGGATCGCTTG +
Preference number: 5 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLQILWR*RWEDRL
Trigger: CAAGCGATCCTCCCACCTCAACCTCCAGAGTATCTG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGAGGCTTTGCCCCACTTaGCTCTGCACTTCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLRLCPT*LCTSPS
Trigger: GGAAGGAGAAGTGCAGAGCAAAGTGGGGCAAAGCCT...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGATTCTCTGTCCAGTTTaGTTCCCTTGCTGGCAAGGA +
Preference number: 5 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQILCPV*FPCWQG
Trigger: TCCTTGCCAGCAAGGGAACAAAACTGGACAGAGAAT...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGACCTTATCCTTCAGCTaGTGCTGCACAGGAGAGGAG +
Preference number: 5 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLTLSFS*CCTGEE
Trigger: CTCCTCTCCTGTGCAGCACAAGCTGAAGGATAAGGT...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGCAGAACAGCAAATATaGCTGCCTGATCCTTACTGT +
Preference number: 5 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQAEQQI*LPDPYC
Trigger: ACAGTAAGGATCAGGCAGCAATATTTGCTGTTCTGC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGGTTTCTCCCCATCTTaGTGGTTTTACCTACCTTTG +
Preference number: 5 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQGFSPS*WFYLPL
Trigger: CAAAGGTAGGTAAAACCACAAAGATGGGGAGAAACC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGCCAGCTTTGTTCTTCTaGCCCAGGATTGTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLPALFF*PRIVLA
Trigger: AGCCAAGACAATCCTGGGCAAGAAGAACAAAGCTGG...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCGTGATGCCTCCAGCTTaGTTCTTCTTGCCCAGGATT +
Preference number: 5 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPVMPPA*FFLPRI
Trigger: AATCCTGGGCAAGAAGAACAAAGCTGGAGGCATCAC...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGTCATTCTGGTTGACTTaGAAGGTGGACTGTCTTTTC +
Preference number: 5 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVSFWLT*KVDCLF
Trigger: GAAAAGACAGTCCACCTTCAAAGTCAACCAGAATGA...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGCTGTATTTCCTGAATTaGAATGTTGGCCTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQLYFLN*NVGLPC
Trigger: GCAAGGAAGGCCAACATTCAAATTCAGGAAATACAG...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGAGTGGCTGGTACTGGTaGTTCCTGTCCATTTTAGTG +
Preference number: 5 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLSGWYW*FLSILV
Trigger: CACTAAAATGGACAGGAACAACCAGTACCAGCCACT...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCGGTCATCCTCTGCAGTaGGGGACTGAAGGACTGGGA +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTGHPLQ*GTEGLG
Trigger: TCCCAGTCCTTCAGTCCCCAACTGCAGAGGATGACC...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCATGCACACTGGAGCATGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGGCCATTGTCATGATATaGATTCTTCCTATCCATGAG +
Preference number: 5 (lower is better)
Translates to: ACTLEHASWPGWQSPRSQAIVMI*ILPIHE
Trigger: CTCATGGATAGGAAGAATCAATATCATGACAATGGC...CTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCATGCTCCAGTGTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGCTTCTTGGCCTGGATGGCAAAGTCCCAGGAGCCAGTCCTAACTCAGACTCTGGGAATCTTTTCCCCATaGCTTGTGTGTGTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: CFLAWMAKSQEPVLTQTLGIFSP*LVCVRF
Trigger: AAACCTGACACACACAAGCAATGGGGAAAAGATTCC...CAGAGTCTGAGTTAGGACTGGCTCCTGGGACTTTGCCATCCAGGCCAAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTGGCCCTGTGGTGACTaGGTGGCAGTTGTCCACTTG +
Preference number: 5 (lower is better)
Translates to: GDWATELITGGAKKRNYIWPCGD*VAVVHL
Trigger: CAAGTGGACAACTGCCACCAAGTCACCACAGGGCCA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCAGAAGTGTATGGGAGGCAGATGCAGCACCCTCCCAAAGCAGCTGGCCCTGTGATGAAAACTATCACCTaGAAGCAGGCTTTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: AEVYGRQMQHPPKAAGPVMKTIT*KQAFLH
Trigger: ATGAAGAAAAGCCTGCTTCAAGGTGATAGTTTTCAT...CACAGGGCCAGCTGCTTTGGGAGGGTGCTGCATCTGCCTCCCATACACTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCCTGCTTTCCATTTGCTaGGTAAATCTTCCTACATCC +
Preference number: 5 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPLLSIC*VNLPTS
Trigger: GGATGTAGGAAGATTTACCAAGCAAATGGAAAGCAG...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAAGGGTCAGGGACCCACTaGAGGAGGCAGTCTGTCTAT +
Preference number: 5 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKGSGTH*RRQSVY
Trigger: ATAGACAGACTGCCTCCTCAAGTGGGTCCCTGACCC...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTTAGCTGCAGGTCTGTaGGAGTTTGCTGGAGGTCCA +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTLAAGL*EFAGGP
Trigger: TGGACCTCCAGCAAACTCCAACAGACCTGCAGCTAA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCGAGGGCATCCTTGCCTaGTGCTGGTCTTCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTEGILA*CWSSKE
Trigger: TTCCTTTGAAGACCAGCACAAGGCAAGGATGCCCTC...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTGTGATCCCCACGTGTaGGGGGAGGGACCTCGTGGA +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFCDPHV*GEGPRG
Trigger: TCCACGAGGTCCCTCCCCCAACACGTGGGGATCACA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCCAGGCAAAGTGCTATTaGAAGAACTCTGAGTATTTA +
Preference number: 5 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPQAKCY*KNSEYL
Trigger: TAAATACTCAGAGTTCTTCAAATAGCACTTTGCCTG...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTATCCTTTCTTCCACTaGATCGAATTGGCTATTGAA +
Preference number: 5 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPYPFFH*IELAIE
Trigger: TTCAATAGCCAATTCGATCAAGTGGAAGAAAGGATA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCAGTTTCTTCATAGTGTaGATGGTCTTTACCATTTGG +
Preference number: 5 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPSFFIV*MVFTIW
Trigger: CCAAATGGTAAAGACCATCAACACTATGAAGAAACT...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CCTCCTCCAGGTATAGTCACTCACGGCTTCCCTTGGCTAGGAAAGGGAAATCCCTTTTCTGCTTTCCATTaGCTTGGTAAATCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: PPPGIVTHGFPWLGKGNPFSAFH*LGKSSY
Trigger: GTAGGAAGATTTACCAAGCAAATGGAAAGCAGAAAA...GGGATTTCCCTTTCCTAGCCAAGGGAAGCCGTGAGTGACTATACCTGGAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCAGTGGTCCACCCTCCTaGGCTTCCGAAAGTGCAGGG +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFSGPPS*ASESAG
Trigger: CCCTGCACTTTCGGAAGCCAAGGAGGGTGGACCACT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATTCGTGGTCTGCCAGTaGCGAAGACTGTGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKFVVCQ*RRLWEK
Trigger: CTTTTCCCACAGTCTTCGCAACTGGCAGACCACGAA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGTAAAGCTCCCCAAGTaGTCTGTGTTCCGCCTCAAC +
Preference number: 5 (lower is better)
Translates to: STCLVSGTTRCSRLILHFVKLPK*SVFRLN
Trigger: GTTGAGGCGGAACACAGACAACTTGGGGAGCTTTAC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGTCCAGTTTTGTTCCCTaGCTGGCAAGGAGTTGTGTT +
Preference number: 5 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWSSFVP*LARSCV
Trigger: AACACAACTCCTTGCCAGCAAGGGAACAAAACTGGA...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTGGTGGATAAGCTTTTaGATATGCTGCTGGATTCGG +
Preference number: 5 (lower is better)
Translates to: GDWATELITGGAKKRNYIWWISF*ICCWIR
Trigger: CCGAATCCAGCAGCATATCAAAAAGCTTATCCACCA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATATGTTGAACCAGCCTaGCATCCCAGGGAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKYVEPA*HPREEA
Trigger: AGCTTCTTCCCTGGGATGCAAGGCTGGTTCAACATA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCTGCCCAATAGTGGGATaGCTGGGTCAAATGGTATTT +
Preference number: 5 (lower is better)
Translates to: GDWATELITGGAKKRNYICPIVG*LGQMVF
Trigger: AAATACCATTTGACCCAGCAATCCCACTATTGGGCA...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCACATGCCATGGTGGTTaGCTGCACCCACCAACCTGT +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFTCHGG*LHPPTC
Trigger: ACAGGTTGGTGGGTGCAGCAAACCACCATGGCATGT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTGGCATTTTGCTCTGTaGTCCAGTCTGGTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTWHFAL*SSLVSN
Trigger: ATTTGAGACCAGACTGGACAACAGAGCAAAATGCCA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTGCAGTGGTGCAATCTaGGCTCCCTACAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFCSGAI*APYNLC
Trigger: GCAGAGGTTGTAGGGAGCCAAGATTGCACCACTGCA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTGCCTTTCTTCCCCTTaGCCTTCTGCTATGATTGTA +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTCLSSP*PSAMIV
Trigger: TACAATCATAGCAGAAGGCAAAGGGGAAGAAAGGCA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGGCTTTATAGAGGCTTaGCCCCACTTTGCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: STCLVSGTTRCSRLILHFGFIEA*PHFALH
Trigger: GTGCAGAGCAAAGTGGGGCAAAGCCTCTATAAAGCC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCGAGGCATTCTGGTTTTaGGAATTTTCAGCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTEAFWF*EFSAFL
Trigger: CAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTC...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GGTGACTGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACTTCTGTCAACTaGTCAAACTCATTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GDWATELITGGAKKRNYIPTSVN*SNSFSV
Trigger: GACAGAGAATGAGTTTGACAAGTTGACAGAAGTAGG...GATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCAGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATGGCTGGCCACAGTGGTaGACACCTGTAAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYGWPQW*TPVSSA
Trigger: TGCTGAGCTTACAGGTGTCAACCACTGTGGCCAGCC...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTAGGAGTTGTGTTCCTTaGGAGGAGAAGAGGCATTCT +
Preference number: 5 (lower is better)
Translates to: STCLVSGTTRCSRLILHFRSCVP*EEKRHS
Trigger: AGAATGCCTCTTCTCCTCCAAAGGAACACAACTCCT...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTTTTTGAAGGGTTTGTaGAGTCTCTATCTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTFLKGL*SLYLLQ
Trigger: CTGAAGGAGATAGAGACTCAACAAACCCTTCAAAAA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCTTTATTGCTTTCTCTaGCCTGATTGCCCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFLYCFL*PDCPGQ
Trigger: CTGGCCAGGGCAATCAGGCAAGAGAAAGCAATAAAG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCGCAAACAGAGACAATTaGACTTCCTCTCTTCCTATT +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTANRDN*TSSLPI
Trigger: AATAGGAAGAGAGGAAGTCAAATTGTCTCTGTTTGC...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATTGTGTGTGTCAGGTTaGTCAAAGATCAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKLCVSG*SKIRWW
Trigger: CCACCATCTGATCTTTGACAAACCTGACACACACAA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGTGACTTGGTGGCAGTaGTCCACTTGGATCCTTAGT +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFVTWWQ*STWILS
Trigger: ACTAAGGATCCAAGTGGACAACTGCCACCAAGTCAC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTTCCTGACTAGGGCTTaGATGAGAGTGCATGCACAC +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFFLTRA*MRVHAH
Trigger: GTGTGCATGCACTCTCATCAAAGCCCTAGTCAGGAA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTCATCTAAAGGTATTTaGATCCAATTCCACCTCCCA +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTSSKGI*IQFHLP
Trigger: TGGGAGGTGGAATTGGATCAAAATACCTTTAGATGA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGTTTAAAGGGAATGGCTaGTGCTGCTGCTTTCATCTA +
Preference number: 5 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWFKGNG*CCCFHL
Trigger: TAGATGAAAGCAGCAGCACAAGCCATTCCCTTTAAA...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS CCA 90 bp GGCAACACTTTACTCAACTTTTCAAGTACGATGCGTTTTCTAATCTaGTTCTGGGAACTTGAGTCTATCAGTGGAAAGGTGGAATCATGC +
Preference number: 5 (lower is better)
Translates to: GNTLLNFSSTMRFLI*FWELESISGKVESC
Trigger: GCATGATTCCACCTTTCCACTGATAGACTCAAGTTCCCAGAACCAGATTAGAAAACGCATCGTACTTGAAAAGTTGAGTAAAGTGTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477322.1
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTCTGGTTCTGGGAACTaGAGTCTATCAGTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFSGSGN*SLSVER
Trigger: CCTTTCCACTGATAGACTCAAGTTCCCAGAACCAGA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAACTGGGAGATGGGAGATaGAAACTTAAAGAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKLGDGR*KLKEVK
Trigger: CTTTACCTCTTTAAGTTTCAATCTCCCATCTCCCAG...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCAGAACTAGATTCATATaGCTTTTCAAAGTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTRTRFI*LFKVAR
Trigger: CCTAGCCACTTTGAAAAGCAATATGAATCTAGTTCT...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTGGTTTTACCTACCTTaGGTCTCTGATGTTGGTGTC +
Preference number: 5 (lower is better)
Translates to: STCLVSGTTRCSRLILHFWFYLP*VSDVGV
Trigger: GACACCAACATCAGAGACCAAAGGTAGGTAAAACCA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCCATTTGGCATGTTTTaGCAGTGGCTGGTACTGGTT +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFPFGMF*QWLVLV
Trigger: AACCAGTACCAGCCACTGCAAAAACATGCCAAATGG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGTATATTCTGTTGATTaGGGGTGGAGAGTTCTGTCG +
Preference number: 5 (lower is better)
Translates to: STCLVSGTTRCSRLILHFVYSVD*GWRVLS
Trigger: CGACAGAACTCTCCACCCCAAATCAACAGAATATAC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTCTGTTCTTTTGCATTaGCTGAAGAGTGCTTTACTT +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTSVLLH*LKSALL
Trigger: AAGTAAAGCACTCTTCAGCAAATGCAAAAGAACAGA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCTCCTCTCTTATTTCCTaGAGCAGTGCTTTGTATTTT +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTSSLIS*SSALYF
Trigger: AAAATACAAAGCACTGCTCAAGGAAATAAGAGAGGA...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGACCATATGTGGGATATaGCATCAGACTTCTTTCACT +
Preference number: 5 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWTICGI*HQTSFT
Trigger: AGTGAAAGAAGTCTGATGCAATATCCCACATATGGT...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAACAAACTAACATAAACTaGGCAGAAGTGTATGGGAGG +
Preference number: 5 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKQTNIN*AEVYGR
Trigger: CCTCCCATACACTTCTGCCAAGTTTATGTTAGTTTG...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp TGGGCCACAGAGCTAATTACTGGTGGAGCCAAGAAGAGAAATTATATCCCTACCAAGATCAACTGGTTTTaGGACATGACTATAAGCAGA +
Preference number: 5 (lower is better)
Translates to: WATELITGGAKKRNYIPTKINWF*DMTISR
Trigger: TCTGCTTATAGTCATGTCCAAAAACCAGTTGATCTT...GGTAGGGATATAATTTCTCTTCTTGGCTCCACCAGTAATTAGCTCTGTGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGAATTTCCTGAACATGTaGCAAGGTGGCTGGATGGCT +
Preference number: 5 (lower is better)
Translates to: AALNSFSFISTLVNLTIMNFLNM*QGGWMA
Trigger: AGCCATCCAGCCACCTTGCAACATGTTCAGGAAATT...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS TCA 90 bp TCAGTCACCACCAGACCATCATGGCGGCTAGAATTCCAGAAACGGTaGATAGAAGTTCATCTTCTATTTTGTCTTCATGGAATATATCAC +
Preference number: 5 (lower is better)
Translates to: SVTTRPSWRLEFQKR*IEVHLLFCLHGIYH
Trigger: GTGATATATTCCATGAAGACAAAATAGAAGATGAACTTCTATTCACCGTTTCTGGAATTCTAGCCGCCATGATGGTCTGGTGGTGACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477322.1
ENST00000610020.2
CDS-3UTR CAA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGCATGCAGTTGTGCAGTaGAGTGAGATTCTTGATCCT +
Preference number: 5 (lower is better)
Translates to: AALNSFSFISTLVNLTIMHAVVQ*SEILDP
Trigger: AGGATCAAGAATCTCACTCAACTGCACAACTGCATG...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTTCTGCATATCTGTTTTaGTACCAGTGCCATGCTGTT +
Preference number: 5 (lower is better)
Translates to: STCLVSGTTRCSRLILHFSAYLF*YQCHAV
Trigger: AACAGCATGGCACTGGTACAAAAACAGATATGCAGA...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GTTCCTTTGGAGGAGAAGAGGCATTCTGGTTTTTGGAATTTTCAGCCTTTCTGGCATGCTTCTATCCTTTaGTTTTTGAGCACTTGCTTA +
Preference number: 5 (lower is better)
Translates to: VPLEEKRHSGFWNFQPFWHASIL*FLSTCL
Trigger: TAAGCAAGTGCTCAAAAACAAAAGGATAGAAGCATG...CCAGAAAGGCTGAAAATTCCAAAAACCAGAATGCCTCTTCTCCTCCAAAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTATATTGTCCTTCACTTaGGTTATGACTGCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: STCLVSGTTRCSRLILHFILSFT*VMTAEV
Trigger: CACCTCTGCAGTCATAACCAAAGTGAAGGACAATAT...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS CCA 90 bp ACTTTACTCAACTTTTCAAGTACGATGCGTTTTCTAATCTGGTTCTaGGAACTTGAGTCTATCAGTGGAAAGGTGGAATCATGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: TLLNFSSTMRFLIWF*ELESISGKVESCSS
Trigger: AGAAGAGCATGATTCCACCTTTCCACTGATAGACTCAAGTTCCCAGAACCAGATTAGAAAACGCATCGTACTTGAAAAGTTGAGTAAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGTCTGTTCTTTGTCTTaGTGTTTGGAGTTAGCTTTG +
Preference number: 5 (lower is better)
Translates to: STCLVSGTTRCSRLILHFVCSLS*CLELAL
Trigger: CAAAGCTAACTCCAAACACAAAGACAAAGAACAGAC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATTTGGGGTTGCTCTTCTaGAGGAGTATCTTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYLGLLF*RSIFVV
Trigger: CACCACAAAGATACTCCTCAAGAAGAGCAACCCCAA...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTGTGATGTTAGGGTGTaGATTTTAGATCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFCDVRV*ILDHSC
Trigger: GCAGGAGTGATCTAAAATCAACACCCTAACATCACA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp AGCACTTGCTTAGTTTCTGGTACTACAAGATGCTCCAGGCTTATCTTGCATTTTGGATTCACTGATTTTTaGAAGGGTTTGTTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: STCLVSGTTRCSRLILHFGFTDF*KGLLSL
Trigger: GAGACTCAACAAACCCTTCAAAAAATCAGTGAATCC...AAAATGCAAGATAAGCCTGGAGCATCTTGTAGTACCAGAAACTAAGCAAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTTCGCTGATGGTAGTTaGTATTTCTGTGGGATCAGT +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFFADGS*YFCGIS
Trigger: ACTGATCCCACAGAAATACAAACTACCATCAGCGAA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp ATGCTTCCAGCTTTTGCCCATTCAGTATGCTATTGGCTGTGGGTTTGTCATAAATTTGCCAGTATTTTATaGAGGATTTTCGCATCGATG +
Preference number: 5 (lower is better)
Translates to: MLPAFAHSVCYWLWVCHKFASIL*RIFASM
Trigger: CATCGATGCGAAAATCCTCAATAAAATACTGGCAAA...TTTATGACAAACCCACAGCCAATAGCATACTGAATGGGCAAAAGCTGGAAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATATTTTGCACACCGATTTaGTATCCTGAGACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYIFCTPI*YPETLL
Trigger: CAGCAAAGTCTCAGGATACAAAATCGGTGTGCAAAA...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS TCA 90 bp CAACTTTTCAAGTACGATGCGTTTTCTAATCTGGTTCTGGGAACTTaGGTCTATCAGTGGAAAGGTGGAATCATGCTGAATCACATTTTT +
Preference number: 5 (lower is better)
Translates to: QLFKYDAFSNLVLGT*VYQWKGGIMLNHIF
Trigger: AAAAATGTGATTCAGCATGATTCCACCTTTCCACTGATAGACTCAAGTTCCCAGAACCAGATTAGAAAACGCATCGTACTTGAAAAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477322.1
CDS-3UTR CAA 90 bp CTTTGTAGAACTTGCTTTATGAATCTGGGTGCTCCTGTATTGGGTGCATATATAAGTCACCCATTAATATaGTGTGGGAGTCTAAATCTC +
Preference number: 5 (lower is better)
Translates to: LCRTCFMNLGAPVLGAYISHPLI*CGSLNL
Trigger: GAGATTTAGACTCCCACACAATATTAATGGGTGACT...TATATATGCACCCAATACAGGAGCACCCAGATTCATAAAGCAAGTTCTACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTCTAATTTGATTGCATaGTGGTCTGAGACGGTTTGT +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFSNLIA*WSETVC
Trigger: ACAAACCGTCTCAGACCACAATGCAATCAAATTAGA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGGTGTCTTTGTTCTCGTaGGTTCCAAAGAACATCTTT +
Preference number: 5 (lower is better)
Translates to: AALNSFSFISTLVNLTIMVSLFS*VPKNIF
Trigger: AAAGATGTTCTTTGGAACCAACGAGAACAAAGACAC...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCACCCATTTGTCAATTTaGGCTTTTGTTGCCATTGCT +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFTHLSI*AFVAIA
Trigger: AGCAATGGCAACAAAAGCCAAAATTGACAAATGGGT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCCTCCCAGCTCCTTTATaGGTAATGTTTTCCAAAACA +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFLPAPL*VMFSKT
Trigger: TGTTTTGGAAAACATTACCAATAAAGGAGCTGGGAG...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GCTGCCCTTAACAGTTTTTCCTTCATTTCAACCTTGGTGAATCTGACAATTATGAACTTACAGCTGACATaGTACTTAATGGCGAAAGAC +
Preference number: 5 (lower is better)
Translates to: AALNSFSFISTLVNLTIMNLQLT*YLMAKD
Trigger: GTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTT...CATAATTGTCAGATTCACCAAGGTTGAAATGAAGGAAAAACTGTTAAGGGCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCGCTGTTCTTGTTGAATaGATCCCTTTACCATTATGT +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFAVLVE*IPLPLC
Trigger: ACATAATGGTAAAGGGATCAATTCAACAAGAACAGC...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp GTCTTGACTGTTTATTCAATTTGCCAGTCTGTGTCTTTTAATTGGGGCATTTATAGAGATTCTGGTACATaGTGTCTTTGTTCTCGTTGG +
Preference number: 5 (lower is better)
Translates to: VLTVYSICQSVSFNWGIYRDSGT*CLCSRW
Trigger: CCAACGAGAACAAAGACACAATGTACCAGAATCTCT...ATAAATGCCCCAATTAAAAGACACAGACTGGCAAATTGAATAAACAGTCAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCTTTGTTTTTGAGCACTaGCTTAGTTTCTGGTACTAC +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFFVFEH*LSFWYY
Trigger: GTAGTACCAGAAACTAAGCAAGTGCTCAAAAACAAA...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS-3UTR CAA 90 bp CTAGGAAAACTTACAGCTGACATTGTACTTAATGGCGAAAGACTGAGTACTTTCAATACACTCTCCCATTaGGTAAATTTTCCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: LGKLTADIVLNGERLSTFNTLSH*VNFPSL
Trigger: CAGAGAAGGAAAATTTACCAAATGGGAGAGTGTATT...GAAAGTACTCAGTCTTTCGCCATTAAGTACAATGTCAGCTGTAAGTTTTCCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610020.2
CDS TCA 72 bp AAGTACGATGCGTTTTCTAATCTGGTTCTGGGAACTTaGGTCTATCAGTGGAAAGGTGGAATCATGCTGAAT +
Preference number: 6 (lower is better)
Translates to: KYDAFSNLVLGT*VYQWKGGIMLN
Trigger: ATTCAGCATGATTCCACCTTTCCACTGATAGACTCAAGTTCCCAGAACCAGATTAGAAAACGCATCGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477322.1
CDS CCA 72 bp AACTTTTCAAGTACGATGCGTTTTCTAATCTGGTTCTaGGAACTTGAGTCTATCAGTGGAAAGGTGGAATCA +
Preference number: 6 (lower is better)
Translates to: NFSSTMRFLIWF*ELESISGKVES
Trigger: TGATTCCACCTTTCCACTGATAGACTCAAGTTCCCAGAACCAGATTAGAAAACGCATCGTACTTGAAAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477322.1
ENST00000610020.2