Pregenerated sensors for ROPN1B (Homo sapiens)

Ensembl gene IDs: ENSG00000114547

Ensembl transcript IDs: ENST00000508088.1, ENST00000511862.5, ENST00000513830.5, ENST00000514116.6

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTCCACGGCAGGACTGGTCAGTTTTTGCTCACCACACCATCCCAGTaGCTAGCCCAGTGCCTGGAACTCAGGCTCGCTCCCAAACCGGCT	+
Preference number: 5 (lower is better) Translates to: LHGRTGQFLLTTPSQ*LAQCLELRLAPKPA Trigger: AGCCGGTTTGGGAGCGAGCCTGAGTTCCAGGCACTGGGCTAGGCACTGGGATGGTGTGGTGAGCAAAAACTGACCAGTCCTGCCGTGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000513830.5
CDS GCA 72 bp	AGGACTGGTCAGTTTTTGCTCACCACACCATCCCAGTaGCTAGCCCAGTGCCTGGAACTCAGGCTCGCTCCC	+
Preference number: 6 (lower is better) Translates to: RTGQFLLTTPSQ*LAQCLELRLAP Trigger: GGGAGCGAGCCTGAGTTCCAGGCACTGGGCTAGGCACTGGGATGGTGTGGTGAGCAAAAACTGACCAGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000513830.5
CDS CAA 72 bp	TCCCCCAGCAAACTCCACGGCAGGACTGGTCAGTTTTaGCTCACCACACCATCCCAGTGCCTAGCCCAGTGC	+
Preference number: 6 (lower is better) Translates to: SPSKLHGRTGQF*LTTPSQCLAQC Trigger: GCACTGGGCTAGGCACTGGGATGGTGTGGTGAGCAAAAACTGACCAGTCCTGCCGTGGAGTTTGCTGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000508088.1 ENST00000513830.5
CDS CAA 90 bp	ACATGTGTCTCCCCCAGCAAACTCCACGGCAGGACTGGTCAGTTTTaGCTCACCACACCATCCCAGTGCCTAGCCCAGTGCCTGGAACTC	+
Preference number: 6 (lower is better) Translates to: TCVSPSKLHGRTGQF*LTTPSQCLAQCLEL Trigger: GAGTTCCAGGCACTGGGCTAGGCACTGGGATGGTGTGGTGAGCAAAAACTGACCAGTCCTGCCGTGGAGTTTGCTGGGGGAGACACATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513830.5
CDS CAA 90 bp	ACATGTGTCTCCCCCAGCAAACTCCACGGCAGGACTGGTCAGTTTTaGCTCACCACACCATCCCAGTGCCTAGCCCAGTGCCTGGAACTT	+
Preference number: 6 (lower is better) Translates to: TCVSPSKLHGRTGQF*LTTPSQCLAQCLEL Trigger: AAGTTCCAGGCACTGGGCTAGGCACTGGGATGGTGTGGTGAGCAAAAACTGACCAGTCCTGCCGTGGAGTTTGCTGGGGGAGACACATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000508088.1
CDS TCA 72 bp	ACCTGGGCACATGTAGATGGCAGGAACTTGAAGCTTTaGGATAAATTGCTCAGGCTCGCTCCCAAACCGGCT	+
Preference number: 6 (lower is better) Translates to: TWAHVDGRNLKL*DKLLRLAPKPA Trigger: AGCCGGTTTGGGAGCGAGCCTGAGCAATTTATCTCAAAGCTTCAAGTTCCTGCCATCTACATGTGCCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511862.5 ENST00000514116.6

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