Pregenerated sensors for ROPN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000065371Ensembl transcript IDs: ENST00000184183.8, ENST00000459660.5, ENST00000467907.5, ENST00000484329.1, ENST00000495093.1, ENST00000496145.5, ENST00000620893.4
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGTTTAGCTTGCAACCCTATTCCTaGCACATAGCTAACCTCAAT | + |
|
Preference number: 2 (lower is better) Translates to: YLYVLRSQHSSWNAARFSLQPYS*HIANLN Trigger: ATTGAGGTTAGCTATGTGCCAGGAATAGGGTTGCAA...GCTAAACCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| 3UTR-3UTR TCA 90 bp | GATATTATTTATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCGAGAGGATGAATGAATaGCTAGCACAGTACCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: DIIYLYVLRSQHSSWNAAERMNE*LAQYQQ Trigger: TTGTTGGTACTGTGCTAGTCATTCATTCATCCTCTC...GGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATAAATAATATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTATTTATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGCCTGTATTTATTTCTTaGAACCCTATTCCTGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: IIYLYVLRSQHSSWNAARPVFIS*NPIPGT Trigger: TGTGCCAGGAATAGGGTTGCAAGAAATAAATACAGG...CCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATAAATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| 3UTR-3UTR TCA 90 bp | GATATTATTTATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCGGGTTTCAGTCATTCTaGAGTACAATCATCTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: DIIYLYVLRSQHSSWNAAGFQSF*STIISV Trigger: TACAGAGATGATTGTACTTCAGAATGACTGAAACCC...GGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATAAATAATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTATTTATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGATTTTGGGTGGTATATaGGTTTCAGTCATTCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: IIYLYVLRSQHSSWNAARILGGI*VSVILK Trigger: CTTCAGAATGACTGAAACCCATATACCACCCAAAAT...CCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATAAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGTTTAGCTCCTGTATTTATTTCTaGCAACCCTATTCCTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: YLYVLRSQHSSWNAARFSSCIYF*QPYSWH Trigger: GTGCCAGGAATAGGGTTGCAAGAAATAAATACAGGA...GCTAAACCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| CDS-3UTR CCA 90 bp | TATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGTTTAGCCTGGGCACATGTAGATaGCAGGAACTTGCAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLYVLRSQHSSWNAARFSLGTCR*QELAAL Trigger: CAAAGCTGCAAGTTCCTGCCATCTACATGTGCCCAG...GCTAAACCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| CDS-3UTR TCA 90 bp | CTGATATTATTTATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCACCCAGCCTCTGTTTaGCACTCAATTTTGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LILFICMCSEASIVPGMLHPASV*HSILGT Trigger: AGTCCCCAAAATTGAGTGTCAAACAGAGGCTGGGTG...CAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATAAATAATATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| CDS-3UTR GCA 90 bp | TATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGTTTAGCCCTGTATTTATTTCTTaGAACCCTATTCCTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YLYVLRSQHSSWNAARFSPVFIS*NPIPGT Trigger: TGTGCCAGGAATAGGGTTGCAAGAAATAAATACAGG...GCTAAACCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| CDS-3UTR TCA 90 bp | TATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGTTTAGCAGGAACTTGCAGCTTTaGGATAAATTGCTATCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: YLYVLRSQHSSWNAARFSRNLQL*DKLLSL Trigger: TAAGGATAGCAATTTATCTCAAAGCTGCAAGTTCCT...GCTAAACCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| CDS-3UTR CCA 90 bp | TATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGTTTAGCATTTTGGGTGGTATATaGGTTTCAGTCATTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLYVLRSQHSSWNAARFSILGGI*VSVILK Trigger: CTTCAGAATGACTGAAACCCATATACCACCCAAAAT...GCTAAACCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGTTTGCAACCCTATTCCTaGCACATAGCTAACCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFICMCSEASIVPGMLPGLQPYS*HIANLN Trigger: ATTGAGGTTAGCTATGTGCCAGGAATAGGGTTGCAA...ACCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| CDS-3UTR TCA 90 bp | ATTATTTATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGGGGTTTCAGTCATTCTaGAGTACAATCATCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IIYLYVLRSQHSSWNAARGFQSF*STIISV Trigger: TACAGAGATGATTGTACTTCAGAATGACTGAAACCC...CCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATAAATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| CDS CCA 90 bp | AATCCTGGACAGGAGGTCACCCAGCCTCTGTTTGACACTCAATTTTaGGGACTCTGCAAGACAAATGCATTCTATTATTACACAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NPGQEVTQPLFDTQF*GLCKTNAFYYYTTP Trigger: TGGCGTTGTGTAATAATAGAATGCATTTGTCTTGCAGAGTCCCCAAAATTGAGTGTCAAACAGAGGCTGGGTGACCTCCTGTCCAGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000620893.4 |
||
| CDS GCA 90 bp | CAGGAGGTCACCCAGCCTCTGTTTGACACTCAATTTTGGGGACTCTaGAAGACAAATGCATTCTATTATTACACAACGCCAAGGTTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QEVTQPLFDTQFWGL*KTNAFYYYTTPRLE Trigger: TTCTAACCTTGGCGTTGTGTAATAATAGAATGCATTTGTCTTGCAGAGTCCCCAAAATTGAGTGTCAAACAGAGGCTGGGTGACCTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620893.4 |
||
| CDS-3UTR CAA 90 bp | TTATTTATTTGTATGTGCTCAGAAGCCAGCATAGTTCCTGGAATGCTGCCAGGTTCCTGTATTTATTTCTaGCAACCCTATTCCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LFICMCSEASIVPGMLPGSCIYF*QPYSWH Trigger: GTGCCAGGAATAGGGTTGCAAGAAATAAATACAGGA...ACCTGGCAGCATTCCAGGAACTATGCTGGCTTCTGAGCACATACAAATAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000184183.8 |
||
| CDS TCA 72 bp | GCCTGGGCACATGTAGATGGCAGGAACTTGCAGCTTTaGGATAAATTGCTCGGCGGGGAGGGCAGCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AWAHVDGRNLQL*DKLLGGEGSSG Trigger: GCCGCTGCTGCCCTCCCCGCCGAGCAATTTATCTCAAAGCTGCAAGTTCCTGCCATCTACATGTGCCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000459660.5 |
||
| CDS TCA 72 bp | GAGCAATCCTGGACAGGAGGTCACCCAGCCTCTGTTTaGCACTCAATTTTGGGGACTCTCAGGCTCGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EQSWTGGHPASV*HSILGTLRLAP Trigger: GGGAGCGAGCCTGAGAGTCCCCAAAATTGAGTGTCAAACAGAGGCTGGGTGACCTCCTGTCCAGGATTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495093.1 |
||
| CDS CAA 90 bp | CATACGATGAGAGCAATCCTGGACAGGAGGTCACCCAGCCTCTGTTaGACACTCAATTTTGGGGACTCTCAGGCTCGCTCCCAAACCGGC | + |
|
Preference number: 6 (lower is better) Translates to: HTMRAILDRRSPSLC*TLNFGDSQARSQTG Trigger: GCCGGTTTGGGAGCGAGCCTGAGAGTCCCCAAAATTGAGTGTCAAACAGAGGCTGGGTGACCTCCTGTCCAGGATTGCTCTCATCGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495093.1 |
||
| CDS CAA 72 bp | AGAGCAATCCTGGACAGGAGGTCACCCAGCCTCTGTTaGACACTCAATTTTGGGGACTCTCAGGCTCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RAILDRRSPSLC*TLNFGDSQARS Trigger: GGAGCGAGCCTGAGAGTCCCCAAAATTGAGTGTCAAACAGAGGCTGGGTGACCTCCTGTCCAGGATTGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495093.1 |
||
| CDS TCA 72 bp | GCCTGGGCACATGTAGATGGCAGGAACTTGCAGCTTTaGGATAAATTGCTCAGGCTCGCTCCCAAACCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AWAHVDGRNLQL*DKLLRLAPKPA Trigger: AGCCGGTTTGGGAGCGAGCCTGAGCAATTTATCTCAAAGCTGCAAGTTCCTGCCATCTACATGTGCCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496145.5 |
||
| CDS TCA 72 bp | GAGCAATCCTGGACAGGAGGTCACCCAGCCTCTGTTTaGCACTCAATTTTGGGGACTCTGGGCACATGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: EQSWTGGHPASV*HSILGTLGTCR Trigger: TCTACATGTGCCCAGAGTCCCCAAAATTGAGTGTCAAACAGAGGCTGGGTGACCTCCTGTCCAGGATTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000184183.8 ENST00000467907.5 ENST00000484329.1 |
||
| CDS TCA 72 bp | CTCTGGGCACATGTAGATGGCAGGAACTTGCAGCTTTaGGATAAATTGCTCAGGCTCGCTCCCAAACCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LWAHVDGRNLQL*DKLLRLAPKPA Trigger: AGCCGGTTTGGGAGCGAGCCTGAGCAATTTATCTCAAAGCTGCAAGTTCCTGCCATCTACATGTGCCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000467907.5 ENST00000484329.1 |
||
| CDS TCA 72 bp | GAGCAATCCTGGACAGGAGGTCACCCAGCCTCTGTTTaGCACTCAATTTTGGGGACTCTGCAAGACAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: EQSWTGGHPASV*HSILGTLQDKC Trigger: GCATTTGTCTTGCAGAGTCCCCAAAATTGAGTGTCAAACAGAGGCTGGGTGACCTCCTGTCCAGGATTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620893.4 |
||
| CDS CAA 72 bp | AGAGCAATCCTGGACAGGAGGTCACCCAGCCTCTGTTaGACACTCAATTTTGGGGACTCTGCAAGACAAATG | + |
|
Preference number: 6 (lower is better) Translates to: RAILDRRSPSLC*TLNFGDSARQM Trigger: CATTTGTCTTGCAGAGTCCCCAAAATTGAGTGTCAAACAGAGGCTGGGTGACCTCCTGTCCAGGATTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620893.4 |
||
| CDS GCA 72 bp | ACCCAGCCTCTGTTTGACACTCAATTTTGGGGACTCTaGAAGACAAATGCATTCTATTATTACACAACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TQPLFDTQFWGL*KTNAFYYYTTP Trigger: TGGCGTTGTGTAATAATAGAATGCATTTGTCTTGCAGAGTCCCCAAAATTGAGTGTCAAACAGAGGCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000620893.4 |
||