RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ROCK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000134318

Ensembl transcript IDs: ENST00000261535.7, ENST00000315872.11, ENST00000401753.5, ENST00000431087.1, ENST00000460262.1, ENST00000462366.1, ENST00000493096.1, ENST00000616279.4

Found 451 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCCAAAACCAGAGCTGCAGAACACACCTGCAAAGGAAACGGCATaGACGTCTAGTCTGAGCACAGACAGCACAGCAGAGTGCAGACTG +
Preference number: 1 (lower is better)
Translates to: PPKPELQNTPAKETA*TSSLSTDSTAECRL
Trigger: CAGTCTGCACTCTGCTGTGCTGTCTGTGCTCAGACTAGACGTGCATGCCGTTTCCTTTGCAGGTGTGTTCTGCAGCTCTGGTTTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR GCA 90 bp CCAAGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTaGTTACAAATGGTGTCTTCACAGCATAGGGAAGCTGAAGCCTTA +
Preference number: 1 (lower is better)
Translates to: PSMISSAVTQCLCSK*LQMVSSQHREAEAL
Trigger: TAAGGCTTCAGCTTCCCTATGCTGTGAAGACACCATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR CCA 90 bp TATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATaGTGTCTTCACAGCATAGGGAAGCTGAAGCCTTATTCCAGGGAA +
Preference number: 1 (lower is better)
Translates to: YPALSHSAYVQSAYK*CLHSIGKLKPYSRE
Trigger: TTCCCTGGAATAAGGCTTCAGCTTCCCTATGCTGTGAAGACACCATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR GCA 90 bp CCTTTAACTCTTCTCAATCCTTGTGTGCATTGTAGTGTGAGCGACTaGCGAGAGAGCTTTATGGAAAAGTCTGGAAGAGTTGCATATATC +
Preference number: 1 (lower is better)
Translates to: PLTLLNPCVHCSVSD*RESFMEKSGRVAYI
Trigger: GATATATGCAACTCTTCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACAAGGATTGAGAAGAGTTAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR CCA 90 bp CTTACCATTGCTGCATATTGTTGCAGTATAAAACACACACTTATCTaGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAAC +
Preference number: 1 (lower is better)
Translates to: LTIAAYCCSIKHTLI*DHENTARMSCVNCN
Trigger: GTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCAGATAAGTGTGTGTTTTATACTGCAACAATATGCAGCAATGGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR GCA 90 bp CATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTTaGTTCAAAGGAGCCCAGATTTGTAATTTATATTACAGGGAAAAG +
Preference number: 1 (lower is better)
Translates to: HISLVYQPIIVGSTC*FKGAQICNLYYREK
Trigger: CTTTTCCCTGTAATATAAATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR-3UTR TCA 90 bp CCTTCATATGAATCTTCCTTGTACAGTTGGTCACACCATGATTCCCCATATTCTGTGTGCATTGTAGTGTaGGCGACTGCCGAGAGAGCT +
Preference number: 2 (lower is better)
Translates to: PSYESSLYSWSHHDSPYSVCIVV*ATAERA
Trigger: AGCTCTCTCGGCAGTCGCTCACACTACAATGCACAC...AGAATATGGGGAATCATGGTGTGACCAACTGTACAAGGAAGATTCATATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR GCA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGGCTGCAGAACACACCTaGAAAGGAAACGGCATGCAC +
Preference number: 2 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMAAEHT*KGNGMH
Trigger: GTGCATGCCGTTTCCTTTGCAGGTGTGTTCTGCAGC...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR GCA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCGTTGGTTCAACCTGTTaGTTCAAAGGAGCCCAGATT +
Preference number: 2 (lower is better)
Translates to: SEFLYFTTRILEESNSSSVGSTC*FKGAQI
Trigger: AATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAAC...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR GCA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCACTGCCACACACAGCTaGATGTCTGAGGATCATATT +
Preference number: 2 (lower is better)
Translates to: SEFLYFTTRILEESNSSSTATHS*MSEDHI
Trigger: AATATGATCCTCAGACATGCAGCTGTGTGTGGCAGT...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR GCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCACTGCCACACACAGCTaGATGTCTGAGGATCATATT +
Preference number: 2 (lower is better)
Translates to: WDHENTARMSCVNCNFDSTATHS*MSEDHI
Trigger: AATATGATCCTCAGACATGCAGCTGTGTGTGGCAGT...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR-3UTR CCA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCCAGCAGAGTGCAGACTaGAGAACGTTAAGAATAACA +
Preference number: 2 (lower is better)
Translates to: SEFLYFTTRILEESNSSSQQSAD*RTLRIT
Trigger: TGTTATTCTTAACGTTCTCCAGTCTGCACTCTGCTG...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR TCA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCCCTAAGACCTTCATATaGATCTTCCTTGTACAGTTG +
Preference number: 2 (lower is better)
Translates to: VSEFLYFTTRILEESNSSPKTFI*IFLVQL
Trigger: CAACTGTACAAGGAAGATTCATATGAAGGTCTTAGG...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR CAA 90 bp GAGTCAGTAGCAGTGTCAATGCAGACTCAGAAGCTCGGCAGTGACTaGCTCAAATCAGATTTTAGACACGATTTAAAGCATGTTTCAGTA +
Preference number: 2 (lower is better)
Translates to: ESVAVSMQTQKLGSD*LKSDFRHDLKHVSV
Trigger: TACTGAAACATGCTTTAAATCGTGTCTAAAATCTGATTTGAGCAAGTCACTGCCGAGCTTCTGAGTCTGCATTGACACTGCTACTGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR TCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTCAAATTAAGTGCCTTTaGGGCCACTTCTTCCCAGTT +
Preference number: 2 (lower is better)
Translates to: DHENTARMSCVNCNFDSIQIKCL*GHFFPV
Trigger: AACTGGGAAGAAGTGGCCTCAAAGGCACTTAATTTG...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR-3UTR GCA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCCTTTACGCTTACCATTaGTGCATATTGTTGCAGTAT +
Preference number: 2 (lower is better)
Translates to: VSEFLYFTTRILEESNSSLYAYH*CILLQY
Trigger: ATACTGCAACAATATGCAGCAATGGTAAGCGTAAAG...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR GCA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAAACACATTGATAGGTaGATGCACTCATGTATGTAC +
Preference number: 2 (lower is better)
Translates to: VSEFLYFTTRILEESNSSKHIDR*MHSCMY
Trigger: GTACATACATGAGTGCATGCACCTATCAATGTGTTT...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR GCA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGATGGCTTTATACAAGTaGATAGTTGCAACTGCAGCA +
Preference number: 2 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMMALYK*IVATAA
Trigger: TGCTGCAGTTGCAACTATGCACTTGTATAAAGCCAT...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR CCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGCAGTCTTGTTTTCACTaGAAGAATACGATCACCTTG +
Preference number: 2 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLQSCFH*KNTITL
Trigger: CAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTG...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR-3UTR CCA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGCTTAAAACTGTGGTGTaGCAACCTAGAGTATTTCTG +
Preference number: 2 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMLKTVV*QPRVFL
Trigger: CAGAAATACTCTAGGTTGCCACACCACAGTTTTAAG...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR GCA 90 bp CTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTCCTCTTCTAGCTCCTTTAGTTCCTCTTTGGCTTaGATCTCATTGCTAAGATGT +
Preference number: 2 (lower is better)
Translates to: LNADSTLFRKVISSSSSFSSSLA*ISLLRC
Trigger: ACATCTTAGCAATGAGATGCAAGCCAAAGAGGAACT...AAAGGAGCTAGAAGAGGAGATTACCTTACGGAAAAGTGTGGAATCAGCATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261535.7
3UTR CAA 90 bp TCTAGGCGAGTATTAACAGATTTGCACTTCTGTTCCAGTTCCTCTTaGGCTTGCATCTCATTGCTAAGATGTTCTTCTAATGTATACAGT +
Preference number: 2 (lower is better)
Translates to: SRRVLTDLHFCSSSS*ACISLLRCSSNVYS
Trigger: ACTGTATACATTAGAAGAACATCTTAGCAATGAGATGCAAGCCAAAGAGGAACTGGAACAGAAGTGCAAATCTGTTAATACTCGCCTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
3UTR-3UTR TCA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGTCAAACCATATAATGTaGAGAATCTCCATGGGAGAG +
Preference number: 2 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSSNHIM*RISMGE
Trigger: CTCTCCCATGGAGATTCTTCACATTATATGGTTTGA...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR CCA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTGGGAACTTCTCTCTTaGGTAGATGTAGTACTCCAA +
Preference number: 2 (lower is better)
Translates to: FSLSNCLNADSTLFRKVIWELLS*VDVVLQ
Trigger: TTGGAGTACTACATCTACCCAAGAGAGAAGTTCCCA...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261535.7
3UTR GCA 72 bp CTCCCAAGTAGCTGGGATTACAGGCCACCACCATCATaGCCGGCTAATTTTTGTATATTGGTAGAGACGGAG +
Preference number: 3 (lower is better)
Translates to: LPSSWDYRPPPS*PANFCILVETE
Trigger: CTCCGTCTCTACCAATATACAAAAATTAGCCGGGCATGATGGTGGTGGCCTGTAATCCCAGCTACTTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR GCA 72 bp CTTCTCAATCCTTGTGTGCATTGTAGTGTGAGCGACTaGCGAGAGAGCTTTATGGAAAAGTCTGGAAGAGTT +
Preference number: 3 (lower is better)
Translates to: LLNPCVHCSVSD*RESFMEKSGRV
Trigger: AACTCTTCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACAAGGATTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR GCA 72 bp ATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTaGTTACAAATGGTGTCTTCACAGCATAGGGAAGCT +
Preference number: 3 (lower is better)
Translates to: ISSAVTQCLCSK*LQMVSSQHREA
Trigger: AGCTTCCCTATGCTGTGAAGACACCATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR CAA 90 bp CTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTCCTCTTCTAGCTCCTTTTTGGGAACTTCTCTCTaGGGTAGATGTAGTACTCCA +
Preference number: 3 (lower is better)
Translates to: LNADSTLFRKVISSSSSFLGTSL*GRCSTP
Trigger: TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAA...AAAGGAGCTAGAAGAGGAGATTACCTTACGGAAAAGTGTGGAATCAGCATTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261535.7
3UTR-3UTR CAA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCGGTGAAACCTCTCTGTaGAAGCTAGAAAAGATGTTT +
Preference number: 3 (lower is better)
Translates to: WDHENTARMSCVNCNFDSGETSL*KLEKMF
Trigger: AAACATCTTTTCTAGCTTCAACAGAGAGGTTTCACC...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR-3UTR CAA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGTGGGAAGAAAACACATaGATAGGTGCATGCACTCAT +
Preference number: 3 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMWEENT*IGACTH
Trigger: ATGAGTGCATGCACCTATCAATGTGTTTTCTTCCCA...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR CCA 72 bp GCTGCATATTGTTGCAGTATAAAACACACACTTATCTaGGATCATGAGAATACGGCAAGAATGTCCTGCGTA +
Preference number: 3 (lower is better)
Translates to: AAYCCSIKHTLI*DHENTARMSCV
Trigger: TACGCAGGACATTCTTGCCGTATTCTCATGATCCCAGATAAGTGTGTGTTTTATACTGCAACAATATGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR-3UTR CAA 90 bp CTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTCCTCTTCTAGCTCCTTTTTGGCTTGCATCTCATaGCTAAGATGTTCTTCTAAT +
Preference number: 3 (lower is better)
Translates to: LNADSTLFRKVISSSSSFLACIS*LRCSSN
Trigger: ATTAGAAGAACATCTTAGCAATGAGATGCAAGCCAA...AAAGGAGCTAGAAGAGGAGATTACCTTACGGAAAAGTGTGGAATCAGCATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261535.7
3UTR-3UTR CAA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCCAGTTCCTCTTTGGCTaGCATCTCATTGCTAAGATG +
Preference number: 3 (lower is better)
Translates to: FSLSNCLNADSTLFRKVIQFLFG*HLIAKM
Trigger: CATCTTAGCAATGAGATGCAAGCCAAAGAGGAACTG...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261535.7
3UTR-3UTR CAA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGAGTCTTATATTTATCTaGGAAGCTTCAGGGCCTCAA +
Preference number: 3 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSSLIFI*EASGPQ
Trigger: TTGAGGCCCTGAAGCTTCCAAGATAAATATAAGACT...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR CCA 72 bp CCCCTAAGACCTTCATATGAATCTTCCTTGTACAGTTaGTCACACCATGATTCCCCATATTCTCTAATATAT +
Preference number: 3 (lower is better)
Translates to: PLRPSYESSLYS*SHHDSPYSLIY
Trigger: ATATATTAGAGAATATGGGGAATCATGGTGTGACCAACTGTACAAGGAAGATTCATATGAAGGTCTTAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR-3UTR CAA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCCGAGTATTAACAGATTaGCACTTCTGTTCCAGTTCC +
Preference number: 3 (lower is better)
Translates to: FSLSNCLNADSTLFRKVIRVLTD*HFCSSS
Trigger: GGAACTGGAACAGAAGTGCAAATCTGTTAATACTCG...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261535.7
3UTR-3UTR CAA 90 bp GTTAGTTTTAAAGGCACTAACCTTTACTTTGGCTTTACTGGTATGCTTATCCATTCATATGAATCTTCCTaGTACAGTTGGTCACACCAT +
Preference number: 3 (lower is better)
Translates to: VSFKGTNLYFGFTGMLIHSYESS*YSWSHH
Trigger: ATGGTGTGACCAACTGTACAAGGAAGATTCATATGA...ATGGATAAGCATACCAGTAAAGCCAAAGTAAAGGTTAGTGCCTTTAAAACTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR GCA 72 bp TTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTTaGTTCAAAGGAGCCCAGATTTGTAATTTATATTAC +
Preference number: 3 (lower is better)
Translates to: LVYQPIIVGSTC*FKGAQICNLYY
Trigger: GTAATATAAATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAGACTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
3UTR CCA 72 bp AAATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTaGAAGAATACGATCACCTTGAATAATGACTGCTTT +
Preference number: 3 (lower is better)
Translates to: KFWAIIFQSCFH*KNTITLNNDCF
Trigger: AAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGAGCCTCCAGCTTCCTCTaGCGGCTCGCGCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGASSFL*RLAPAP
Trigger: CGGGGCAGGCGCGAGCCGCCAGAGGAAGCTGGAGGC...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCCGCCGCCGGCCGCCTTaGAGTCCCTCAGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSEFLYFTTRILEESNSSRRRPP*SPSASS
Trigger: GGAGCTGGCTGAGGGACTGCAAGGCGGCCGGCGGCG...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGACTGGTCCTCAGCGAGTaGCCGCAGGAGTCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGLVLSE*PQESSG
Trigger: GCCCGAGGACTCCTGCGGGCACTCGCTGAGGACCAG...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGAGCAAGCTCTCCACGTTaGTGGGGGAGCGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGASSPR*WGSEGL
Trigger: GAGACCCTCGCTCCCCCATCAACGTGGAGAGCTTGC...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCCTGGTCCTCAGCGAGTaGCCGCAGGAGTCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSLVLSE*PQESSG
Trigger: GCCCGAGGACTCCTGCGGGCACTCGCTGAGGACCAG...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCAGCCTCCAGCTTCCTCTaGCGGCTCGCGCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPASSFL*RLAPAP
Trigger: CGGGGCAGGCGCGAGCCGCCAGAGGAAGCTGGAGGC...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTGCCTCCAGCTTCCTCTaGCGGCTCGCGCCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIASSFL*RLAPAP
Trigger: CGGGGCAGGCGCGAGCCGCCAGAGGAAGCTGGAGGC...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCTCATGCCGCCACCGCTaGACCCGCACTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSSCRHR*TRTQAP
Trigger: AGGAGCCTGAGTGCGGGTCCAGCGGTGGCGGCATGA...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCAGCAAGCTCTCCACGTTaGTGGGGGAGCGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPASSPR*WGSEGL
Trigger: GAGACCCTCGCTCCCCCATCAACGTGGAGAGCTTGC...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR TCA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCGTGTGCATTGTAGTGTaGGCGACTGCCGAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SEFLYFTTRILEESNSSSVCIVV*ATAERA
Trigger: AGCTCTCTCGGCAGTCGCTCACACTACAATGCACAC...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGAAAGGTGATCTCCAGTTaGGCAGCCAAAGAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGKVISS*AAKESR
Trigger: ACGGGACTCTTTGGCTGCCCAACTGGAGATCACCTT...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTGCAAGCTCTCCACGTTaGTGGGGGAGCGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIASSPR*WGSEGL
Trigger: GAGACCCTCGCTCCCCCATCAACGTGGAGAGCTTGC...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCCTGCTTTGGTCAAGGTaGTCTCCAGTTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSLLWSR*SPVGQP
Trigger: TGGCTGCCCAACTGGAGATCACCTTGACCAAAGCAG...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCGCTGCAGAACACACCTaGAAAGGAAACGGCATGCAC +
Preference number: 4 (lower is better)
Translates to: SEFLYFTTRILEESNSSSAAEHT*KGNGMH
Trigger: GTGCATGCCGTTTCCTTTGCAGGTGTGTTCTGCAGC...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTTCATGCCGCCACCGCTaGACCCGCACTCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCSCRHR*TRTQAP
Trigger: AGGAGCCTGAGTGCGGGTCCAGCGGTGGCGGCATGA...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCCCAATATGCAAGGCTTaGAGTTGTGACCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VSEFLYFTTRILEESNSSPICKA*SCDRSC
Trigger: GCAGCTGCGGTCACAACTCCAAGCCTTGCATATTGG...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCTGCCTCAGCATCCCCTaGTCCACTGCCTATACTGGA +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSCLSIP*STAYTG
Trigger: TCCAGTATAGGCAGTGGACCAGGGGATGCTGAGGCA...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCGCAACCACCGTCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSATTVS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGACGGTGGTTGC...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGATGCCCATCTGCATCCTaGCGTTCTTTTCGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGCPSAS*RSFRSS
Trigger: TGAACTTCGAAAAGAACGTCAGGATGCAGATGGGCA...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGATTAGCTAGGTTTGTTTaGGGCAAGCTGTCGACTTGG +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGLARFV*GKLSTW
Trigger: CCAAGTCGACAGCTTGCCCCAAACAAACCTAGCTAA...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCTCATTATTATGGGGATaGGAGTCAGGGAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSSLLWG*ESGRGP
Trigger: GGGGCCTCTCCCTGACTCCCATCCCCATAATAATGA...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCTGCCCATCTGCATCCTaGCGTTCTTTTCGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: VSEFLYFTTRILEESNSSCPSAS*RSFRSS
Trigger: TGAACTTCGAAAAGAACGTCAGGATGCAGATGGGCA...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGATCAGAAGCTCGGCAGTaGCTTGCTCAAATCAGATTT +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGSEARQ*LAQIRF
Trigger: AAATCTGATTTGAGCAAGTCACTGCCGAGCTTCTGA...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGCCAGGGAAGGAGAGGTaGGTCAGTAGCAGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMPGKER*VSSSVN
Trigger: ATTGACACTGCTACTGACTCACCTCTCCTTCCCTGG...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCCATCCCCTGGTCCACTaGCTATACTGGAACTATCCA +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSHPLVH*LYWNYP
Trigger: TGGATAGTTCCAGTATAGGCAGTGGACCAGGGGATG...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCGCAAAGGAAACGGCATaGACGTCTAGTCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSAKETA*TSSLST
Trigger: TGTGCTCAGACTAGACGTGCATGCCGTTTCCTTTGC...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTGCAACCACCGTCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSIATTVS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGACGGTGGTTGC...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGATTTCAGAACCTCAGGTaGTATATAATCCGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGFQNLR*YIIRCS
Trigger: GGAACACCGGATTATATATCACCTGAGGTTCTGAAA...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGATTCTTTCATGGCTTCTaGTTTGGCTTCTTCGATGGA +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGFFHGF*FGFFDG
Trigger: TCCATCGAAGAAGCCAAATCAGAAGCCATGAAAGAA...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGAACTTATCTGGGATCATaGGAATACGGCAAGAATGTC +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGTYLGS*EYGKNV
Trigger: GACATTCTTGCCGTATTCTCATGATCCCAGATAAGT...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTTGGAAACCCATCATCTaGCTCAGCATCCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIWKPII*LSIPWS
Trigger: GGACCAGGGGATGCTGAGGCAGATGATGGGTTTCCA...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCGGAGGCTTAAACATGTaGCACAGGGGCTTCATACAA +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSGGLNM*HRGFIQ
Trigger: TTGTATGAAGCCCCTGTGGCACATGTTTAAGCCTCC...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCCCGGTACTAAAATACTaGCACACACAGCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSPVLKY*HTQLHV
Trigger: GACATGCAGCTGTGTGTGGCAGTATTTTAGTACCGG...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTGGAGTCTTGTTCAGCTaGCCAGGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCGVLFS*PGWSAV
Trigger: CACTGCACTCCAGCCTGGGCAGCTGAACAAGACTCC...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCATTCTGCGATGCCTTGTaGCGAACCAACTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPFCDAL*RTNCTS
Trigger: TGAAGTGCAGTTGGTTCGTCACAAGGCATCGCAGAA...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR TCA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCTCTGCATTTTTGTGCTaGAGAAGCGCCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SEFLYFTTRILEESNSSSSAFLC*RSAFSL
Trigger: AAGAGAAAAGGCGCTTCTTCAGCACAAAAATGCAGA...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTGTTCTGCTTCGAGCTaGTCCTGGAGCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLCSASS*SWSSFI
Trigger: AATGAAAGAGCTCCAGGATCAGCTCGAAGCAGAACA...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGCAAGGCTTGGAGTTGTaGCCGCAGCTGCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRQGLEL*PQLLNV
Trigger: GACATTGAGCAGCTGCGGTCACAACTCCAAGCCTTG...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGGTGTGCATTGTAGTGTaGGCGACTGCCGAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRVCIVV*ATAERA
Trigger: AGCTCTCTCGGCAGTCGCTCACACTACAATGCACAC...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTCATGCACGTCTAGTCTaGGCACAGACAGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCHARLV*AQTAQQ
Trigger: CTGCTGTGCTGTCTGTGCTCAGACTAGACGTGCATG...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp GAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCAAATGCTAGGACCCATGGAGTGTATTaGATCCAGAGCAAGAACAAC +
Preference number: 4 (lower is better)
Translates to: EERLGTSLLGRCSTPNARTHGVY*IQSKNN
Trigger: GTTGTTCTTGCTCTGGATGCAATACACTCCATGGGT...CCTAGCATTTGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR GCA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCCTGTCCAATGTCATCTaGAGTTCAATTCGAATCTGG +
Preference number: 4 (lower is better)
Translates to: SEFLYFTTRILEESNSSSLSNVI*SSIRIW
Trigger: CCAGATTCGAATTGAACTGCAGATGACATTGGACAG...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp GTTAGTTTTAAAGGCACTAACCTTTACTTTGGCTTTACTGGTATGCTTATCCATGGAGTCTTGTTCAGCTaGCCAGGCTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: VSFKGTNLYFGFTGMLIHGVLFS*PGWSAV
Trigger: CACTGCACTCCAGCCTGGGCAGCTGAACAAGACTCC...ATGGATAAGCATACCAGTAAAGCCAAAGTAAAGGTTAGTGCCTTTAAAACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCCTAGTCGTGCCTTTGTaGCCTTATGTTCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSLVVPL*PYVQLL
Trigger: AAGAAGCTGAACATAAGGCCACAAAGGCACGACTAG...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTAAGGTGATCTCCAGTTaGGCAGCCAAAGAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIKVISS*AAKESR
Trigger: ACGGGACTCTTTGGCTGCCCAACTGGAGATCACCTT...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTGCCTCAGCATCCCCTaGTCCACTGCCTATACTGGA +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRCLSIP*STAYTG
Trigger: TCCAGTATAGGCAGTGGACCAGGGGATGCTGAGGCA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGCCTCAGCATCCCCTaGTCCACTGCCTATACTGGA +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPCLSIP*STAYTG
Trigger: TCCAGTATAGGCAGTGGACCAGGGGATGCTGAGGCA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCTCTTCCTTGTACAGTTaGTCACACCATGATTCCCCA +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSSSLYS*SHHDSP
Trigger: TGGGGAATCATGGTGTGACCAACTGTACAAGGAAGA...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp CTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTCCTCTTCTAGCTCCTTTTGTCTATGTCACTGCTaGGTTCAGGTACTACAGGAG +
Preference number: 4 (lower is better)
Translates to: LNADSTLFRKVISSSSSFCLCHC*VQVLQE
Trigger: CTCCTGTAGTACCTGAACTCAGCAGTGACATAGACA...AAAGGAGCTAGAAGAGGAGATTACCTTACGGAAAAGTGTGGAATCAGCATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR TCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTTGTCTATGTCACTGCTaGGTTCAGGTACTACAGGAG +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSICLCHC*VQVLQE
Trigger: CTCCTGTAGTACCTGAACTCAGCAGTGACATAGACA...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCTGCTTTGGTCAAGGTaGTCTCCAGTTGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNLLWSR*SPVGQP
Trigger: TGGCTGCCCAACTGGAGATCACCTTGACCAAAGCAG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCGTTCTTTCTGATACTTaGTCATCTGCTGGGTCAATT +
Preference number: 4 (lower is better)
Translates to: VSEFLYFTTRILEESNSSVLSDT*SSAGSI
Trigger: AATTGACCCAGCAGATGATCAAGTATCAGAAAGAAC...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTCAAGGCTTGGAGTTGTaGCCGCAGCTGCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVQGLEL*PQLLNV
Trigger: GACATTGAGCAGCTGCGGTCACAACTCCAAGCCTTG...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGAGTAACTGGTCGGACATaGAATAACTTGTCTATATCT +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGVTGRT*NNLSIS
Trigger: AGATATAGACAAGTTATTTCATGTCCGACCAGTTAC...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGCAGTTGCTCAGAATCTaGTTTGGTCAAGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLQLLRI*FGQGDL
Trigger: GAGATCACCTTGACCAAAGCAGATTCTGAGCAACTG...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGATTGAACGAGCCAGTTaGTCAGAATCTGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLIERAS*SESALV
Trigger: GACCAAAGCAGATTCTGAGCAACTGGCTCGTTCAAT...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGCTGCTTCTCAAACTGTaGTTTAATAGCTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLLLLKL*FNSCCA
Trigger: AGCGCAGCAGCTATTAAAGCACAGTTTGAGAAGCAG...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGCTATCCAGACCAATATaGAAGGCTTGGAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLLSRPI*KAWSCD
Trigger: GTCACAACTCCAAGCCTTGCATATTGGTCTGGATAG...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp GTTAGTTTTAAAGGCACTAACCTTTACTTTGGCTTTACTGGTATGCTTATCCATTGGAAACCCATCATCTaGCTCAGCATCCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VSFKGTNLYFGFTGMLIHWKPII*LSIPWS
Trigger: GGACCAGGGGATGCTGAGGCAGATGATGGGTTTCCA...ATGGATAAGCATACCAGTAAAGCCAAAGTAAAGGTTAGTGCCTTTAAAACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATGGAAACCCATCATCTaGCTCAGCATCCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRWKPII*LSIPWS
Trigger: GGACCAGGGGATGCTGAGGCAGATGATGGGTTTCCA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCATGGCTTTATACAAGTaGATAGTTGCAACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VSEFLYFTTRILEESNSSMALYK*IVATAA
Trigger: TGCTGCAGTTGCAACTATGCACTTGTATAAAGCCAT...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCTTTCAAGTTTTAACTTaGCAGTCTCCAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSFQVLT*QSPAGS
Trigger: ACTGCCTGCTGGAGACTGCCAAGTTAAAACTTGAAA...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTGGCAAGCTGTCGACTTaGCCGTCTAATAGACTGGTT +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIGKLST*PSNRLV
Trigger: AACCAGTCTATTAGACGGCCAAGTCGACAGCTTGCC...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTTTAGCTAGGTTTGTTTaGGGCAAGCTGTCGACTTGG +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSILARFV*GKLSTW
Trigger: CCAAGTCGACAGCTTGCCCCAAACAAACCTAGCTAA...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCAAACACACACTTATCTaGGATCATGAGAATACGGCA +
Preference number: 4 (lower is better)
Translates to: SEFLYFTTRILEESNSSSKHTLI*DHENTA
Trigger: TGCCGTATTCTCATGATCCCAGATAAGTGTGTGTTT...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR CAA 72 bp GCAGTGTCAATGCAGACTCAGAAGCTCGGCAGTGACTaGCTCAAATCAGATTTTAGACACGATTTAAAGCAT +
Preference number: 4 (lower is better)
Translates to: AVSMQTQKLGSD*LKSDFRHDLKH
Trigger: ATGCTTTAAATCGTGTCTAAAATCTGATTTGAGCAAGTCACTGCCGAGCTTCTGAGTCTGCATTGACACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATCATTAATTATCTCTaGTCCATGGGTTCGATCCCT +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSIINYL*SMGSIP
Trigger: AGGGATCGAACCCATGGATCAGAGATAATTAATGAT...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTTCTTTCATGGCTTCTaGTTTGGCTTCTTCGATGGA +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLFFHGF*FGFFDG
Trigger: TCCATCGAAGAAGCCAAATCAGAAGCCATGAAAGAA...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGGTAAGGCAGCGCTTCTaGGTTTCTTGCTCTATTTTT +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLVRQRF*VSCSIF
Trigger: AAAAATAGAGCAAGAAACTCAGAAGCGCTGCCTTAC...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTGTCATTACCACGCTTaGCAGGTTCTTTTCGATTCA +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLCHYHA*QVLFDS
Trigger: TGAATCGAAAAGAACCTGTCAAGCGTGGTAATGACA...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCGTAACTGGTCGGACATaGAATAACTTGTCTATATCT +
Preference number: 4 (lower is better)
Translates to: SEFLYFTTRILEESNSSSVTGRT*NNLSIS
Trigger: AGATATAGACAAGTTATTTCATGTCCGACCAGTTAC...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCAATAAACCTTCTGCGATaGCTTGTGACGAACCAACTG +
Preference number: 4 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPINLLR*LVTNQL
Trigger: CAGTTGGTTCGTCACAAGGCATCGCAGAAGGTTTAT...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR GCA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGAACAGATGAGATTCTTTaGATGTTTGGAAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGTDEIL*MFGNFC
Trigger: GCAGAAATTTCCAAACATGCAAAGAATCTCATCTGT...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGCAATGTCATCGAAATTaGTGCTGTCTATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMQCHRN*CCLCHC
Trigger: GCAGTGACATAGACAGCAGCAATTTCGATGACATTG...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTAGTTGTGACCGCAGCTaGTCAATGTCACTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSISCDRS*SMSLSL
Trigger: TAAAGACAGTGACATTGAGCAGCTGCGGTCACAACT...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGGGAGGCTTAAACATGTaGCACAGGGGCTTCATACAA +
Preference number: 4 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSGGLNM*HRGFIQ
Trigger: TTGTATGAAGCCCCTGTGGCACATGTTTAAGCCTCC...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTGTTGGTTCAACCTGTTaGTTCAAAGGAGCCCAGATT +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSIVGSTC*FKGAQI
Trigger: AATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAAC...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAAGGTGATCTCCAGTTaGGCAGCCAAAGAGTCCCGT +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRKVISS*AAKESR
Trigger: ACGGGACTCTTTGGCTGCCCAACTGGAGATCACCTT...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGTTCAATTCGAATCTaGCTCTCTTCAGCTATTTGT +
Preference number: 4 (lower is better)
Translates to: VSEFLYFTTRILEESNSSSSIRI*LSSAIC
Trigger: ACAAATAGCTGAAGAGAGCCAGATTCGAATTGAACT...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCCAATATGCAAGGCTTaGAGTTGTGACCGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNPICKA*SCDRSC
Trigger: GCAGCTGCGGTCACAACTCCAAGCCTTGCATATTGG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGGGCAAGCTGTCGACTTaGCCGTCTAATAGACTGGTT +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRGKLST*PSNRLV
Trigger: AACCAGTCTATTAGACGGCCAAGTCGACAGCTTGCC...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCTCAACCAATCATTGTTaGTTCAACCTGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SEFLYFTTRILEESNSSSSTNHC*FNLLLQ
Trigger: TTGAAGCAACAGGTTGAACCAACAATGATTGGTTGA...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTGCCGAGAGAGCTTTATaGAAAAGTCTGGAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSIAERAL*KSLEEL
Trigger: CAACTCTTCCAGACTTTTCCATAAAGCTCTCTCGGC...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCAAACACACACTTATCTaGGATCATGAGAATACGGCA +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSKHTLI*DHENTA
Trigger: TGCCGTATTCTCATGATCCCAGATAAGTGTGTGTTT...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGGTAAGCCACCATGCCTaGCCAGATGATGTATTTAAA +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLVSHHA*PDDVFK
Trigger: TTTAAATACATCATCTGGCCAGGCATGGTGGCTTAC...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCCTTAAAACTGTGGTGTaGCAACCTAGAGTATTTCTG +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSLKTVV*QPRVFL
Trigger: CAGAAATACTCTAGGTTGCCACACCACAGTTTTAAG...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATTCTGCGATGCCTTGTaGCGAACCAACTGCACTTCA +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRFCDAL*RTNCTS
Trigger: TGAAGTGCAGTTGGTTCGTCACAAGGCATCGCAGAA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCTTAAGAAAGCACAGATaGGATTCTTTGCATGTTTGG +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSLRKHR*DSLHVW
Trigger: CCAAACATGCAAAGAATCTCATCTGTGCTTTCTTAA...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCATCTGCATTTTTGTGCTaGAGAAGCGCCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPSAFLC*RSAFSL
Trigger: AAGAGAAAAGGCGCTTCTTCAGCACAAAAATGCAGA...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR TCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTGTTCTGCTTCGAGCTaGTCCTGGAGCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRCSASS*SWSSFI
Trigger: AATGAAAGAGCTCCAGGATCAGCTCGAAGCAGAACA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTTGTCATTACCACGCTTaGCAGGTTCTTTTCGATTCA +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSICHYHA*QVLFDS
Trigger: TGAATCGAAAAGAACCTGTCAAGCGTGGTAATGACA...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGTCATTCAGTTCTTTCTaGTACTTGATCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMSFSSF*YLIICW
Trigger: CCAGCAGATGATCAAGTATCAGAAAGAACTGAATGA...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp CCTTCATATGAATCTTCCTTGTACAGTTGGTCACACCATGATTCCCCATATTCTCAGTTGGTCACACCATaGTTCCCCATATTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: PSYESSLYSWSHHDSPYSQLVTP*FPIFSN
Trigger: ATTAGAGAATATGGGGAATCATGGTGTGACCAACTG...AGAATATGGGGAATCATGGTGTGACCAACTGTACAAGGAAGATTCATATGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGACCCATGGAGTGTATTaGATCCAGAGCAAGAACAAC +
Preference number: 4 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSTHGVY*IQSKNN
Trigger: GTTGTTCTTGCTCTGGATGCAATACACTCCATGGGT...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGAGTTCCTCTTTGGCTTaGATCTCATTGCTAAGATGT +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLSSSLA*ISLLRC
Trigger: ACATCTTAGCAATGAGATGCAAGCCAAAGAGGAACT...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp CCTTCATATGAATCTTCCTTGTACAGTTGGTCACACCATGATTCCCCATATTCTTTTCATTTGCCCATCTaGATCCTGACGTTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: PSYESSLYSWSHHDSPYSFHLPI*ILTFFS
Trigger: CGAAAAGAACGTCAGGATGCAGATGGGCAAATGAAA...AGAATATGGGGAATCATGGTGTGACCAACTGTACAAGGAAGATTCATATGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCTTCTTCTTTCTCATTTaGAAGATTGGCAACATCACT +
Preference number: 4 (lower is better)
Translates to: VSEFLYFTTRILEESNSSFFFLI*KIGNIT
Trigger: AGTGATGTTGCCAATCTTGCAAATGAGAAAGAAGAA...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGAGTTGTGACCGCAGCTaGTCAATGTCACTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSSCDRS*SMSLSL
Trigger: TAAAGACAGTGACATTGAGCAGCTGCGGTCACAACT...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCATCCCCTGGTCCACTaGCTATACTGGAACTATCCA +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNHPLVH*LYWNYP
Trigger: TGGATAGTTCCAGTATAGGCAGTGGACCAGGGGATG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGACATCCCCTGGTCCACTaGCTATACTGGAACTATCCA +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRHPLVH*LYWNYP
Trigger: TGGATAGTTCCAGTATAGGCAGTGGACCAGGGGATG...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTGGAGGCTTAAACATGTaGCACAGGGGCTTCATACAA +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPGGLNM*HRGFIQ
Trigger: TTGTATGAAGCCCCTGTGGCACATGTTTAAGCCTCC...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTCGACTAACCCACTTCTaGTGCTCTTCTGTAGAATTT +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSIRLTHF*CSSVEF
Trigger: AAATTCTACAGAAGAGCAGCAGAAGTGGGTTAGTCG...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTCCGGTACTAAAATACTaGCACACACAGCTGCATGTC +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPPVLKY*HTQLHV
Trigger: GACATGCAGCTGTGTGTGGCAGTATTTTAGTACCGG...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTACGGCAAGAATGTCCTaGGTAAACTGTAACTTTGAC +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSITARMS*VNCNFD
Trigger: GTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGT...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTAGGCCACCACCATCATaGCCGGCTAATTTTTGTATA +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIRPPPS*PANFCI
Trigger: TATACAAAAATTAGCCGGGCATGATGGTGGTGGCCT...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTAGCGCTGTCACACAGTaGTTATGTTCAAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSISAVTQ*LCSKCL
Trigger: TAAGCACTTTGAACATAAGCACTGTGTGACAGCGCT...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCATGGGAACTTCTCTCTTaGGTAGATGTAGTACTCCAA +
Preference number: 4 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPWELLS*VDVVLQ
Trigger: TTGGAGTACTACATCTACCCAAGAGAGAAGTTCCCA...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CCA 90 bp CCTTCATATGAATCTTCCTTGTACAGTTGGTCACACCATGATTCCCCATATTCTTCATGGCTTCTGATTTaGCTTCTTCGATGGACTCAT +
Preference number: 4 (lower is better)
Translates to: PSYESSLYSWSHHDSPYSSWLLI*LLRWTH
Trigger: ATGAGTCCATCGAAGAAGCCAAATCAGAAGCCATGA...AGAATATGGGGAATCATGGTGTGACCAACTGTACAAGGAAGATTCATATGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCAGTTCAATTCGAATCTaGCTCTCTTCAGCTATTTGT +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSSSIRI*LSSAIC
Trigger: ACAAATAGCTGAAGAGAGCCAGATTCGAATTGAACT...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGGCAAGCTGTCGACTTaGCCGTCTAATAGACTGGTT +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNGKLST*PSNRLV
Trigger: AACCAGTCTATTAGACGGCCAAGTCGACAGCTTGCC...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTTAGCTAGGTTTGTTTaGGGCAAGCTGTCGACTTGG +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRLARFV*GKLSTW
Trigger: CCAAGTCGACAGCTTGCCCCAAACAAACCTAGCTAA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTGCCGAGAGAGCTTTATaGAAAAGTCTGGAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIAERAL*KSLEEL
Trigger: CAACTCTTCCAGACTTTTCCATAAAGCTCTCTCGGC...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTTGTCTATGTCACTGCTaGGTTCAGGTACTACAGGAG +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVCLCHC*VQVLQE
Trigger: CTCCTGTAGTACCTGAACTCAGCAGTGACATAGACA...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATGTCTATGTCACTGCTaGGTTCAGGTACTACAGGAG +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRCLCHC*VQVLQE
Trigger: CTCCTGTAGTACCTGAACTCAGCAGTGACATAGACA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTTCTGCTGTGACTGTTTaGGGTCACAGTCTAATAGAG +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCSAVTV*GHSLIE
Trigger: CTCTATTAGACTGTGACCTCAAACAGTCACAGCAGA...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTGCCCATCTGCATCCTaGCGTTCTTTTCGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNCPSAS*RSFRSS
Trigger: TGAACTTCGAAAAGAACGTCAGGATGCAGATGGGCA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATGTTCTGCTTCGAGCTaGTCCTGGAGCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRCSASS*SWSSFI
Trigger: AATGAAAGAGCTCCAGGATCAGCTCGAAGCAGAACA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGACTCATGTATGTACATaGAAGCGGCAATGCGGTAAA +
Preference number: 4 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSTHVCT*KRQCGK
Trigger: TTTACCGCATTGCCGCTTTCATGTACATACATGAGT...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGTATCACAATGTACCATaGCTGTTTCATCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMYHNVP*LFHPSS
Trigger: TGAAGATGGATGAAACAGGCATGGTACATTGTGATA...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGATGTTTGGAAATTTCTaGATCTTCAGGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLMFGNF*IFRETQ
Trigger: CTGTGTTTCCCTGAAGATGCAGAAATTTCCAAACAT...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTCAATGTCATCGAAATTaGTGCTGTCTATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIQCHRN*CCLCHC
Trigger: GCAGTGACATAGACAGCAGCAATTTCGATGACATTG...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCTTAACCTGTTGTGTTTaGATCTTCAGGTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSLTCCV*IFRSFC
Trigger: ACAAAATGACCTGAAGATGCAAACACAACAGGTTAA...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTATTGAACGAGCCAGTTaGTCAGAATCTGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCIERAS*SESALV
Trigger: GACCAAAGCAGATTCTGAGCAACTGGCTCGTTCAAT...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp CCTTCATATGAATCTTCCTTGTACAGTTGGTCACACCATGATTCCCCATATTCTCTGTGCTTTAATAGCTaGTGCGCTTATTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: PSYESSLYSWSHHDSPYSLCFNS*CAYFFI
Trigger: GATGAAGAAATAAGCGCAGCAGCTATTAAAGCACAG...AGAATATGGGGAATCATGGTGTGACCAACTGTACAAGGAAGATTCATATGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTCTGCTTCTCAAACTGTaGTTTAATAGCTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPLLLKL*FNSCCA
Trigger: AGCGCAGCAGCTATTAAAGCACAGTTTGAGAAGCAG...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCACCTTGAATAATGACTaGTTTCATAGAAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: WDHENTARMSCVNCNFDSTLNND*FHRRQL
Trigger: TAACTGCCTTCTATGAAAGCAGTCATTATTCAAGGT...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGCTTTACGCTTACCATTaGTGCATATTGTTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLLYAYH*CILLQY
Trigger: ATACTGCAACAATATGCAGCAATGGTAAGCGTAAAG...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTAGCTCGGCAGTGACTTaGTCAAATCAGATTTTAGAC +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVISSAVT*SNQILD
Trigger: GTCTAAAATCTGATTTGAGCAAGTCACTGCCGAGCT...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCATGTGTATTAAACCCATaGAGTGTATTGCATCCAGAG +
Preference number: 4 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPCVLNP*SVLHPE
Trigger: CTCTGGATGCAATACACTCCATGGGTTTAATACACA...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTCAGTCTTGTTTTCACTaGAAGAATACGATCACCTTG +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSIQSCFH*KNTITL
Trigger: CAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTG...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGAACTTCTTAAAACTGTaGTGTGGCAACCTAGAGTAT +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLNFLKL*CGNLEY
Trigger: ATACTCTAGGTTGCCACACCACAGTTTTAAGAAGTT...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCATTATCCCAATGCCACTaGTCATTCTTAAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPLSQCH*SFLKKG
Trigger: TCCTTTCTTTAAGAATGATCAGTGGCATTGGGATAA...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR TCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTCTGCATTTTTGTGCTaGAGAAGCGCCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPSAFLC*RSAFSL
Trigger: AAGAGAAAAGGCGCTTCTTCAGCACAAAAATGCAGA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTCTGCATTTTTGTGCTaGAGAAGCGCCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRSAFLC*RSAFSL
Trigger: AAGAGAAAAGGCGCTTCTTCAGCACAAAAATGCAGA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTTCTTTCATGGCTTCTaGTTTGGCTTCTTCGATGGA +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRFFHGF*FGFFDG
Trigger: TCCATCGAAGAAGCCAAATCAGAAGCCATGAAAGAA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTCTGCTGTGACTGTTTaGGGTCACAGTCTAATAGAG +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNSAVTV*GHSLIE
Trigger: CTCTATTAGACTGTGACCTCAAACAGTCACAGCAGA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGGTAAGGCAGCGCTTCTaGGTTTCTTGCTCTATTTTT +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRVRQRF*VSCSIF
Trigger: AAAAATAGAGCAAGAAACTCAGAAGCGCTGCCTTAC...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCAAATTAAGTGCCTTTaGGGCCACTTCTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNQIKCL*GHFFPV
Trigger: AACTGGGAAGAAGTGGCCTCAAAGGCACTTAATTTG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTCAAATTAAGTGCCTTTaGGGCCACTTCTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVQIKCL*GHFFPV
Trigger: AACTGGGAAGAAGTGGCCTCAAAGGCACTTAATTTG...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAATAAACCTTCTGCGATaGCTTGTGACGAACCAACTG +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRINLLR*LVTNQL
Trigger: CAGTTGGTTCGTCACAAGGCATCGCAGAAGGTTTAT...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATATAAACCTTCTGCGATaGCTTGTGACGAACCAACTG +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNINLLR*LVTNQL
Trigger: CAGTTGGTTCGTCACAAGGCATCGCAGAAGGTTTAT...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp CTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTCCTCTTCTAGCTCCTTTATGTTTGGAAATTTCTaGATCTTCAGGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: LNADSTLFRKVISSSSSFMFGNF*IFRETQ
Trigger: CTGTGTTTCCCTGAAGATGCAGAAATTTCCAAACAT...AAAGGAGCTAGAAGAGGAGATTACCTTACGGAAAAGTGTGGAATCAGCATTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR GCA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGACAGATGAGATTCTTTaGATGTTTGGAAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMTDEIL*MFGNFC
Trigger: GCAGAAATTTCCAAACATGCAAAGAATCTCATCTGT...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp CTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTCCTCTTCTAGCTCCTTTTTCTTAAAGAAAGGATaGTGTCTGATTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: LNADSTLFRKVISSSSSFFLKKG*CLISST
Trigger: GGTGGAAGAAATCAGACAGCATCCTTTCTTTAAGAA...AAAGGAGCTAGAAGAGGAGATTACCTTACGGAAAAGTGTGGAATCAGCATTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR GCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTTTTCATTTGCCCATCTaGATCCTGACGTTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCFHLPI*ILTFFS
Trigger: CGAAAAGAACGTCAGGATGCAGATGGGCAAATGAAA...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGACAGTTGCTCAGAATCTaGTTTGGTCAAGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRQLLRI*FGQGDL
Trigger: GAGATCACCTTGACCAAAGCAGATTCTGAGCAACTG...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCAGTTGCTCAGAATCTaGTTTGGTCAAGGTGATCTC +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNQLLRI*FGQGDL
Trigger: GAGATCACCTTGACCAAAGCAGATTCTGAGCAACTG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAATTGAACGAGCCAGTTaGTCAGAATCTGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRIERAS*SESALV
Trigger: GACCAAAGCAGATTCTGAGCAACTGGCTCGTTCAAT...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGACTGCTTCTCAAACTGTaGTTTAATAGCTGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRLLLKL*FNSCCA
Trigger: AGCGCAGCAGCTATTAAAGCACAGTTTGAGAAGCAG...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGCTGTCCAATGTCATCTaGAGTTCAATTCGAATCTGG +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRLSNVI*SSIRIW
Trigger: CCAGATTCGAATTGAACTGCAGATGACATTGGACAG...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGTTGTGACCGCAGCTaGTCAATGTCACTGTCTTTA +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRSCDRS*SMSLSL
Trigger: TAAAGACAGTGACATTGAGCAGCTGCGGTCACAACT...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGACTATCCAGACCAATATaGAAGGCTTGGAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRLSRPI*KAWSCD
Trigger: GTCACAACTCCAAGCCTTGCATATTGGTCTGGATAG...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCTATCCAGACCAATATaGAAGGCTTGGAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNLSRPI*KAWSCD
Trigger: GTCACAACTCCAAGCCTTGCATATTGGTCTGGATAG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGCGACTAACCCACTTCTaGTGCTCTTCTGTAGAATTT +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRRLTHF*CSSVEF
Trigger: AAATTCTACAGAAGAGCAGCAGAAGTGGGTTAGTCG...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GTTAGTTTTAAAGGCACTAACCTTTACTTTGGCTTTACTGGTATGCTTATCCATGTTGGTTCAACCTGTTaGTTCAAAGGAGCCCAGATT +
Preference number: 4 (lower is better)
Translates to: VSFKGTNLYFGFTGMLIHVGSTC*FKGAQI
Trigger: AATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAAC...ATGGATAAGCATACCAGTAAAGCCAAAGTAAAGGTTAGTGCCTTTAAAACTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAACTGCCACACACAGCTaGATGTCTGAGGATCATATT +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRTATHS*MSEDHI
Trigger: AATATGATCCTCAGACATGCAGCTGTGTGTGGCAGT...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGATTATCTCTGATCCATaGGTTCGATCCCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRIISDP*VRSLLS
Trigger: TGAAAGGAGGGATCGAACCCATGGATCAGAGATAAT...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCTAGTCGTGCCTTTGTaGCCTTATGTTCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNLVVPL*PYVQLL
Trigger: AAGAAGCTGAACATAAGGCCACAAAGGCACGACTAG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTTACTTGATCATCTGCTaGGTCAATTTCTCACGTTCA +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIYLIIC*VNFSRS
Trigger: TGAACGTGAGAAATTGACCCAGCAGATGATCAAGTA...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTGTCCACTGCCTATACTaGAACTATCCAGACCAATAT +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPVHCLY*NYPDQY
Trigger: ATATTGGTCTGGATAGTTCCAGTATAGGCAGTGGAC...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTGTCCACTGCCTATACTaGAACTATCCAGACCAATAT +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCVHCLY*NYPDQY
Trigger: ATATTGGTCTGGATAGTTCCAGTATAGGCAGTGGAC...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTCCAACTGGCTCCACTaGAAATTCTTGTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRSNWLH*KFLFLL
Trigger: AAGAAGGAACAAGAATTTCCAGTGGAGCCAGTTGGA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGAGATTTTTCTCCAACTaGCTCCACTGGAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSRFFSN*LHWKFL
Trigger: CAAGAATTTCCAGTGGAGCCAGTTGGAGAAAAATCT...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTTAAGGCATTCAAAATaGGTAAAGTTGCCTATCATG +
Preference number: 4 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLLRHSK*VKLPIM
Trigger: CATGATAGGCAACTTTACCCATTTTGAATGCCTTAA...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTGTAAGCCACCATGCCTaGCCAGATGATGTATTTAAA +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPVSHHA*PDDVFK
Trigger: TTTAAATACATCATCTGGCCAGGCATGGTGGCTTAC...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTCAAAACTCATTATTATaGGGATGGGAGTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCQNSLL*GWESGR
Trigger: TCTCCCTGACTCCCATCCCCATAATAATGAGTTTTG...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTTTCAGAACCTCAGGTaGTATATAATCCGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: FSLSNCLNADSTLFRKVIFQNLR*YIIRCS
Trigger: GGAACACCGGATTATATATCACCTGAGGTTCTGAAA...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR TCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTTTCAGAACCTCAGGTaGTATATAATCCGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNFQNLR*YIIRCS
Trigger: GGAACACCGGATTATATATCACCTGAGGTTCTGAAA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATTTCAGAACCTCAGGTaGTATATAATCCGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRFQNLR*YIIRCS
Trigger: GGAACACCGGATTATATATCACCTGAGGTTCTGAAA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTTTATCCCAATGCCACTaGTCATTCTTAAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVILSQCH*SFLKKG
Trigger: TCCTTTCTTTAAGAATGATCAGTGGCATTGGGATAA...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTATCATTAATTATCTCTaGTCCATGGGTTCGATCCCT +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPIINYL*SMGSIP
Trigger: AGGGATCGAACCCATGGATCAGAGATAATTAATGAT...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGTAAGGCAGCGCTTCTaGGTTTCTTGCTCTATTTTT +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNVRQRF*VSCSIF
Trigger: AAAAATAGAGCAAGAAACTCAGAAGCGCTGCCTTAC...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTGTTCTTTTCGATTCATaGTCTCAGCCAACTTATTCA +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIVLFDS*SQPTYS
Trigger: TGAATAAGTTGGCTGAGATCATGAATCGAAAAGAAC...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTGTCATTACCACGCTTaGCAGGTTCTTTTCGATTCA +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNCHYHA*QVLFDS
Trigger: TGAATCGAAAAGAACCTGTCAAGCGTGGTAATGACA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTGTTCTTTCTGATACTTaGTCATCTGCTGGGTCAATT +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPVLSDT*SSAGSI
Trigger: AATTGACCCAGCAGATGATCAAGTATCAGAAAGAAC...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTCATTCAGTTCTTTCTaGTACTTGATCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPSFSSF*YLIICW
Trigger: CCAGCAGATGATCAAGTATCAGAAAGAACTGAATGA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCCAATGTCATCGAAATTaGTGCTGTCTATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: FSLSNCLNADSTLFRKVIQCHRN*CCLCHC
Trigger: GCAGTGACATAGACAGCAGCAATTTCGATGACATTG...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGACAATGTCATCGAAATTaGTGCTGTCTATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRQCHRN*CCLCHC
Trigger: GCAGTGACATAGACAGCAGCAATTTCGATGACATTG...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTAGTTCCTCTTTGGCTTaGATCTCATTGCTAAGATGT +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPSSSLA*ISLLRC
Trigger: ACATCTTAGCAATGAGATGCAAGCCAAAGAGGAACT...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp CTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTCCTCTTCTAGCTCCTTTTTTCCTCTGATATTCTaGATTTTTGTGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LNADSTLFRKVISSSSSFFPLIF*IFVLKK
Trigger: CTTCTTCAGCACAAAAATGCAGAATATCAGAGGAAA...AAAGGAGCTAGAAGAGGAGATTACCTTACGGAAAAGTGTGGAATCAGCATTAAG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR GCA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTAGCTCATTTATTTTCTaGTGTGACTGTTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NQSLLVQPVASKEPRFVISSFIF*CDCLRS
Trigger: TGACCTCAAACAGTCACAGCAGAAAATAAATGAGCT...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATTTCATTTGCCCATCTaGATCCTGACGTTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRFHLPI*ILTFFS
Trigger: CGAAAAGAACGTCAGGATGCAGATGGGCAAATGAAA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTTGCTTTAATAGCTGCTaGGCTTATTTCTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSICFNSC*AYFFIF
Trigger: AAAGATGAAGAAATAAGCGCAGCAGCTATTAAAGCA...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTCTGTGCTTTAATAGCTaGTGCGCTTATTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCLCFNS*CAYFFI
Trigger: GATGAAGAAATAAGCGCAGCAGCTATTAAAGCACAG...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTCTCTTCAGCTATTTGTaGCTGCATTTCATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPLFSYL*LHFIQF
Trigger: GAACTGAATGAAATGCAGGCACAAATAGCTGAAGAG...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGCTCTTCAGCTATTTGTaGCTGCATTTCATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRLFSYL*LHFIQF
Trigger: GAACTGAATGAAATGCAGGCACAAATAGCTGAAGAG...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTAATTTCTTTAGCATCTaGTCTATACACATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: DHENTARMSCVNCNFDSINFFSI*SIHICL
Trigger: CAGACAGATGTGTATAGAGCAGATGCTAAAGAAATT...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCGACTAACCCACTTCTaGTGCTCTTCTGTAGAATTT +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNRLTHF*CSSVEF
Trigger: AAATTCTACAGAAGAGCAGCAGAAGTGGGTTAGTCG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAACGGCAAGAATGTCCTaGGTAAACTGTAACTTTGAC +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRTARMS*VNCNFD
Trigger: GTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGT...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGAAACACATTGATAGGTaGATGCACTCATGTATGTAC +
Preference number: 4 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSKHIDR*MHSCMY
Trigger: GTACATACATGAGTGCATGCACCTATCAATGTGTTT...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTTCGCAGTAAAGCATTaGTTTCATCCAGTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPFAVKH*FHPVVS
Trigger: AGAGACAACTGGATGAAACCAATGCTTTACTGCGAA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTTTTCAAGTTTTAACTTaGCAGTCTCCAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRAFQVLT*QSPAGS
Trigger: ACTGCCTGCTGGAGACTGCCAAGTTAAAACTTGAAA...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATTTCAAGTTTTAACTTaGCAGTCTCCAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRFQVLT*QSPAGS
Trigger: ACTGCCTGCTGGAGACTGCCAAGTTAAAACTTGAAA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATATTATCTCTGATCCATaGGTTCGATCCCTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNIISDP*VRSLLS
Trigger: TGAAAGGAGGGATCGAACCCATGGATCAGAGATAAT...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATCATGGCTTCTGATTTaGCTTCTTCGATGGACTCAT +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRSWLLI*LLRWTH
Trigger: ATGAGTCCATCGAAGAAGCCAAATCAGAAGCCATGA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTTCATGGCTTCTGATTTaGCTTCTTCGATGGACTCAT +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRASWLLI*LLRWTH
Trigger: ATGAGTCCATCGAAGAAGCCAAATCAGAAGCCATGA...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTACTTGATCATCTGCTaGGTCAATTTCTCACGTTCA +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRYLIIC*VNFSRS
Trigger: TGAACGTGAGAAATTGACCCAGCAGATGATCAAGTA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATCCAACTGGCTCCACTaGAAATTCTTGTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRSNWLH*KFLFLL
Trigger: AAGAAGGAACAAGAATTTCCAGTGGAGCCAGTTGGA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTTCCAACTGGCTCCACTaGAAATTCTTGTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRASNWLH*KFLFLL
Trigger: AAGAAGGAACAAGAATTTCCAGTGGAGCCAGTTGGA...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTACAAGCCTCACAGTTaGTTGGGAAATGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPYKPHS*LGNDKE
Trigger: CTCTTTATCATTTCCCAACCAACTGTGAGGCTTGTA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTGGCCGTCTAATAGACTaGTTTTGCTGTATCTTCATT +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPGRLID*FCCIFI
Trigger: AATGAAGATACAGCAAAACCAGTCTATTAGACGGCC...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTCAGTCTTGTTTTCACTaGAAGAATACGATCACCTTG +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCQSCFH*KNTITL
Trigger: CAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTG...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp GTTAGTTTTAAAGGCACTAACCTTTACTTTGGCTTTACTGGTATGCTTATCCATCAGCAGAGTGCAGACTaGAGAACGTTAAGAATAACA +
Preference number: 4 (lower is better)
Translates to: VSFKGTNLYFGFTGMLIHQQSAD*RTLRIT
Trigger: TGTTATTCTTAACGTTCTCCAGTCTGCACTCTGCTG...ATGGATAAGCATACCAGTAAAGCCAAAGTAAAGGTTAGTGCCTTTAAAACTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
3UTR CAA 72 bp GTATTAACAGATTTGCACTTCTGTTCCAGTTCCTCTTaGGCTTGCATCTCATTGCTAAGATGTTCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: VLTDLHFCSSSS*ACISLLRCSSN
Trigger: ATTAGAAGAACATCTTAGCAATGAGATGCAAGCCAAAGAGGAACTGGAACAGAAGTGCAAATCTGTTAATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR TCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTTAAGAAAGCACAGATaGGATTCTTTGCATGTTTGG +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRLRKHR*DSLHVW
Trigger: CCAAACATGCAAAGAATCTCATCTGTGCTTTCTTAA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTATCATTAATTATCTCTaGTCCATGGGTTCGATCCCT +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVIINYL*SMGSIP
Trigger: AGGGATCGAACCCATGGATCAGAGATAATTAATGAT...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGGTTCTTTTCGATTCATaGTCTCAGCCAACTTATTCA +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRVLFDS*SQPTYS
Trigger: TGAATAAGTTGGCTGAGATCATGAATCGAAAAGAAC...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGTTCTTTCTGATACTTaGTCATCTGCTGGGTCAATT +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVVLSDT*SSAGSI
Trigger: AATTGACCCAGCAGATGATCAAGTATCAGAAAGAAC...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATCATTCAGTTCTTTCTaGTACTTGATCATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRSFSSF*YLIICW
Trigger: CCAGCAGATGATCAAGTATCAGAAAGAACTGAATGA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGACCTAAGACCTTCATATaGATCTTCCTTGTACAGTTG +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRPKTFI*IFLVQL
Trigger: CAACTGTACAAGGAAGATTCATATGAAGGTCTTAGG...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTTCTTAAAGAAAGGATaGTGTCTGATTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRFLKKG*CLISST
Trigger: GGTGGAAGAAATCAGACAGCATCCTTTCTTTAAGAA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCAGTTCCTCTTTGGCTTaGATCTCATTGCTAAGATGT +
Preference number: 4 (lower is better)
Translates to: FSLSNCLNADSTLFRKVISSSLA*ISLLRC
Trigger: ACATCTTAGCAATGAGATGCAAGCCAAAGAGGAACT...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR GCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGAGCTCATTTATTTTCTaGTGTGACTGTTTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRSSFIF*CDCLRS
Trigger: TGACCTCAAACAGTCACAGCAGAAAATAAATGAGCT...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGTGCTTTAATAGCTGCTaGGCTTATTTCTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSCFNSC*AYFFIF
Trigger: AAAGATGAAGAAATAAGCGCAGCAGCTATTAAAGCA...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCTGTGCTTTAATAGCTaGTGCGCTTATTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNLCFNS*CAYFFI
Trigger: GATGAAGAAATAAGCGCAGCAGCTATTAAAGCACAG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTCAGCTATTTGTGCCTaGATTTCATTCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPSAICA*ISFSSF
Trigger: GAAAGAACTGAATGAAATGCAGGCACAAATAGCTGA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTCTCTTCAGCTATTTGTaGCTGCATTTCATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRALFSYL*LHFIQF
Trigger: GAACTGAATGAAATGCAGGCACAAATAGCTGAAGAG...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTATGGCTTTATACAAGTaGATAGTTGCAACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVMALYK*IVATAA
Trigger: TGCTGCAGTTGCAACTATGCACTTGTATAAAGCCAT...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTTGTGTATTAAACCCATaGAGTGTATTGCATCCAGAG +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVCVLNP*SVLHPE
Trigger: CTCTGGATGCAATACACTCCATGGGTTTAATACACA...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTTTCGCAGTAAAGCATTaGTTTCATCCAGTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVFAVKH*FHPVVS
Trigger: AGAGACAACTGGATGAAACCAATGCTTTACTGCGAA...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTTACTTGATCATCTGCTaGGTCAATTTCTCACGTTCA +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVYLIIC*VNFSRS
Trigger: TGAACGTGAGAAATTGACCCAGCAGATGATCAAGTA...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATAGATTTTTCTCCAACTaGCTCCACTGGAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNRFFSN*LHWKFL
Trigger: CAAGAATTTCCAGTGGAGCCAGTTGGAGAAAAATCT...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTAGATTTTTCTCCAACTaGCTCCACTGGAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRARFFSN*LHWKFL
Trigger: CAAGAATTTCCAGTGGAGCCAGTTGGAGAAAAATCT...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATACAAGCCTCACAGTTaGTTGGGAAATGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRYKPHS*LGNDKE
Trigger: CTCTTTATCATTTCCCAACCAACTGTGAGGCTTGTA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTTACAAGCCTCACAGTTaGTTGGGAAATGATAAAGAG +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVYKPHS*LGNDKE
Trigger: CTCTTTATCATTTCCCAACCAACTGTGAGGCTTGTA...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTGGCCGTCTAATAGACTaGTTTTGCTGTATCTTCATT +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRAGRLID*FCCIFI
Trigger: AATGAAGATACAGCAAAACCAGTCTATTAGACGGCC...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAGGCCGTCTAATAGACTaGTTTTGCTGTATCTTCATT +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRGRLID*FCCIFI
Trigger: AATGAAGATACAGCAAAACCAGTCTATTAGACGGCC...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGACAGTCTTGTTTTCACTaGAAGAATACGATCACCTTG +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRQSCFH*KNTITL
Trigger: CAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTG...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTGTCTTATATTTATCTTaGAAGCTTCAGGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRAVLYLS*KLQGLK
Trigger: CTTGAGGCCCTGAAGCTTCCAAGATAAATATAAGAC...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTTAAGAAAGCACAGATaGGATTCTTTGCATGTTTGG +
Preference number: 4 (lower is better)
Translates to: FSLSNCLNADSTLFRKVILRKHR*DSLHVW
Trigger: CCAAACATGCAAAGAATCTCATCTGTGCTTTCTTAA...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR TCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTTAAGAAAGCACAGATaGGATTCTTTGCATGTTTGG +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNLRKHR*DSLHVW
Trigger: CCAAACATGCAAAGAATCTCATCTGTGCTTTCTTAA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp GTTAGTTTTAAAGGCACTAACCTTTACTTTGGCTTTACTGGTATGCTTATCCATTTATCCCAATGCCACTaGTCATTCTTAAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: VSFKGTNLYFGFTGMLIHLSQCH*SFLKKG
Trigger: TCCTTTCTTTAAGAATGATCAGTGGCATTGGGATAA...ATGGATAAGCATACCAGTAAAGCCAAAGTAAAGGTTAGTGCCTTTAAAACTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR TCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTTATCCCAATGCCACTaGTCATTCTTAAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNLSQCH*SFLKKG
Trigger: TCCTTTCTTTAAGAATGATCAGTGGCATTGGGATAA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR TCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTGTTCTTTTCGATTCATaGTCTCAGCCAACTTATTCA +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRAVLFDS*SQPTYS
Trigger: TGAATAAGTTGGCTGAGATCATGAATCGAAAAGAAC...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR TCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGTAACTGGTCGGACATaGAATAACTTGTCTATATCT +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNVTGRT*NNLSIS
Trigger: AGATATAGACAAGTTATTTCATGTCCGACCAGTTAC...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTATCACAATGTACCATaGCTGTTTCATCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: FSLSNCLNADSTLFRKVIYHNVP*LFHPSS
Trigger: TGAAGATGGATGAAACAGGCATGGTACATTGTGATA...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR GCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTTATCACAATGTACCATaGCTGTTTCATCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVYHNVP*LFHPSS
Trigger: TGAAGATGGATGAAACAGGCATGGTACATTGTGATA...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAATGTTTGGAAATTTCTaGATCTTCAGGGAAACACAG +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRMFGNF*IFRETQ
Trigger: CTGTGTTTCCCTGAAGATGCAGAAATTTCCAAACAT...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTACAGATGAGATTCTTTaGATGTTTGGAAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPTDEIL*MFGNFC
Trigger: GCAGAAATTTCCAAACATGCAAAGAATCTCATCTGT...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTTCTTAAAGAAAGGATaGTGTCTGATTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNFLKKG*CLISST
Trigger: GGTGGAAGAAATCAGACAGCATCCTTTCTTTAAGAA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTTTCTTAAAGAAAGGATaGTGTCTGATTTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVFLKKG*CLISST
Trigger: GGTGGAAGAAATCAGACAGCATCCTTTCTTTAAGAA...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTTTCCTCTGATATTCTaGATTTTTGTGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPFPLIF*IFVLKK
Trigger: CTTCTTCAGCACAAAAATGCAGAATATCAGAGGAAA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GTTAGTTTTAAAGGCACTAACCTTTACTTTGGCTTTACTGGTATGCTTATCCATTCTTGTTCTAGGCTCTaGTGTATAACTTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: VSFKGTNLYFGFTGMLIHSCSRL*CITFSW
Trigger: CCAACTAAAAGTTATACAGCAGAGCCTAGAACAAGA...ATGGATAAGCATACCAGTAAAGCCAAAGTAAAGGTTAGTGCCTTTAAAACTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR GCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTCTTGTTCTAGGCTCTaGTGTATAACTTTTAGTTGG +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNSCSRL*CITFSW
Trigger: CCAACTAAAAGTTATACAGCAGAGCCTAGAACAAGA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTTCTTCTTTCTCATTTaGAAGATTGGCAACATCACT +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPFFFLI*KIGNIT
Trigger: AGTGATGTTGCCAATCTTGCAAATGAGAAAGAAGAA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTTTCTTCTTTCTCATTTaGAAGATTGGCAACATCACT +
Preference number: 4 (lower is better)
Translates to: EELHISLVYQPIIVGSTCFFFLI*KIGNIT
Trigger: AGTGATGTTGCCAATCTTGCAAATGAGAAAGAAGAA...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTGCTTTAATAGCTGCTaGGCTTATTTCTTCATCTTT +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRCFNSC*AYFFIF
Trigger: AAAGATGAAGAAATAAGCGCAGCAGCTATTAAAGCA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTAATTTCTTTAGCATCTaGTCTATACACATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPNFFSI*SIHICL
Trigger: CAGACAGATGTGTATAGAGCAGATGCTAAAGAAATT...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTCTTTACGCTTACCATTaGTGCATATTGTTGCAGTAT +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRALYAYH*CILLQY
Trigger: ATACTGCAACAATATGCAGCAATGGTAAGCGTAAAG...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATAGTTCAATTCGAATCTaGCTCTCTTCAGCTATTTGT +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNSSIRI*LSSAIC
Trigger: ACAAATAGCTGAAGAGAGCCAGATTCGAATTGAACT...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTTGGCATACAGAATCTaGAATATCCTTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRLAYRI*NILGIS
Trigger: AGAAATTCCAAGGATATTCCAGATTCTGTATGCCAA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CCA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTTCAACCAATCATTGTTaGTTCAACCTGTTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: WKSLEELHISLVYQPIIVSTNHC*FNLLLQ
Trigger: TTGAAGCAACAGGTTGAACCAACAATGATTGGTTGA...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCACAGATGAGATTCTTTaGATGTTTGGAAATTTCTGC +
Preference number: 4 (lower is better)
Translates to: FSLSNCLNADSTLFRKVITDEIL*MFGNFC
Trigger: GCAGAAATTTCCAAACATGCAAAGAATCTCATCTGT...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATTTCCTCTGATATTCTaGATTTTTGTGCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRFPLIF*IFVLKK
Trigger: CTTCTTCAGCACAAAAATGCAGAATATCAGAGGAAA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATTAACCTGTTGTGTTTaGATCTTCAGGTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRLTCCV*IFRSFC
Trigger: ACAAAATGACCTGAAGATGCAAACACAACAGGTTAA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTTTAACCTGTTGTGTTTaGATCTTCAGGTCATTTTGT +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRALTCCV*IFRSFC
Trigger: ACAAAATGACCTGAAGATGCAAACACAACAGGTTAA...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAATTTCTTTAGCATCTaGTCTATACACATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRNFFSI*SIHICL
Trigger: CAGACAGATGTGTATAGAGCAGATGCTAAAGAAATT...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATACCTTGAATAATGACTaGTTTCATAGAAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNTLNND*FHRRQL
Trigger: TAACTGCCTTCTATGAAAGCAGTCATTATTCAAGGT...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR GCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTACCTTGAATAATGACTaGTTTCATAGAAGGCAGTTA +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRATLNND*FHRRQL
Trigger: TAACTGCCTTCTATGAAAGCAGTCATTATTCAAGGT...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR GCA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATGCTTATGTTCAAAGTaGTTACAAATGGTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRCLCSK*LQMVSS
Trigger: TGAAGACACCATTTGTAAGCACTTTGAACATAAGCA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CCA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTTTGGCATACAGAATCTaGAATATCCTTGGAATTTCT +
Preference number: 4 (lower is better)
Translates to: VKIVHDLSSTKLVYILRALAYRI*NILGIS
Trigger: AGAAATTCCAAGGATATTCCAGATTCTGTATGCCAA...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CCA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTTAAGGCATTCAAAATaGGTAAAGTTGCCTATCATG +
Preference number: 4 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNLRHSK*VKLPIM
Trigger: CATGATAGGCAACTTTACCCATTTTGAATGCCTTAA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS GCA 90 bp CTACGGCCGCCGCCGGCCCGCTGCCATGGTCGCCGCCGGCCGCCTTaGAGTCCCTCAGCCAGCTCCCGGCGCACACACTCCCGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: LRPPPARCHGRRRPP*SPSASSRRTHSRAA
Trigger: GGCCGCGCGGGAGTGTGTGCGCCGGGAGCTGGCTGAGGGACTGCAAGGCGGCCGGCGGCGACCATGGCAGCGGGCCGGCGGCGGCCGTAG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS GCA 90 bp AGGCTGAAGCCCAGGCCTGGGCCACTACGGCCGCCGCCGGCCCGCTaGCATGGTCGCCGCCGGCCGCCTTGCAGTCCCTCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RLKPRPGPLRPPPAR*HGRRRPPCSPSASS
Trigger: GGAGCTGGCTGAGGGACTGCAAGGCGGCCGGCGGCGACCATGGCAGCGGGCCGGCGGCGGCCGTAGTGGCCCAGGCCTGGGCTTCAGCCT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS CCA 90 bp AGACGGCGTCCCCGCCCCTCAGTCAGATTCGCGCCGCCGGTCCGCTaGTCCTCAGCGAGTGCCCGCAGGAGTCCTCGGGCGGGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: RRRPRPSVRFAPPVR*SSASARRSPRAGAG
Trigger: CCCTGCTCCCGCCCGAGGACTCCTGCGGGCACTCGCTGAGGACCAGCGGACCGGCGGCGCGAATCTGACTGAGGGGCGGGGACGCCGTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS GCA 90 bp CCCCTCAGTCAGATTCGCGCCGCCGGTCCGCTGGTCCTCAGCGAGTaGCCGCAGGAGTCCTCGGGCGGGAGCAGGGAAGTGGCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: PLSQIRAAGPLVLSE*PQESSGGSREVAPP
Trigger: TGGCGGCGCCACTTCCCTGCTCCCGCCCGAGGACTCCTGCGGGCACTCGCTGAGGACCAGCGGACCGGCGGCGCGAATCTGACTGAGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS CCA 90 bp GAAACCCATCATCTGCCTCAGCATCCCCTGGTCCACTGCCTATACTaGAACTATCCAGACCAATATGCAAGGCTTGGAGTTGTGACCGCA +
Preference number: 5 (lower is better)
Translates to: ETHHLPQHPLVHCLY*NYPDQYARLGVVTA
Trigger: TGCGGTCACAACTCCAAGCCTTGCATATTGGTCTGGATAGTTCCAGTATAGGCAGTGGACCAGGGGATGCTGAGGCAGATGATGGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTTCGCCGCCGGCCGCCTaGCAGTCCCTCAGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: EELHISLVYQPIIVGSTCSPPAA*QSLSQL
Trigger: GAGCTGGCTGAGGGACTGCAAGGCGGCCGGCGGCGA...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS CCA 90 bp GGTCCACTGCCTATACTGGAACTATCCAGACCAATATGCAAGGCTTaGAGTTGTGACCGCAGCTGCTCAATGTCACTGTCTTTACTGTCC +
Preference number: 5 (lower is better)
Translates to: GPLPILELSRPICKA*SCDRSCSMSLSLLS
Trigger: GGACAGTAAAGACAGTGACATTGAGCAGCTGCGGTCACAACTCCAAGCCTTGCATATTGGTCTGGATAGTTCCAGTATAGGCAGTGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS TCA 90 bp CAGCAATTGAACGAGCCAGTTGCTCAGAATCTGCTTTGGTCAAGGTaGTCTCCAGTTGGGCAGCCAAAGAGTCCCGTTCATCCTGTAATT +
Preference number: 5 (lower is better)
Translates to: QQLNEPVAQNLLWSR*SPVGQPKSPVHPVI
Trigger: AATTACAGGATGAACGGGACTCTTTGGCTGCCCAACTGGAGATCACCTTGACCAAAGCAGATTCTGAGCAACTGGCTCGTTCAATTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS GCA 90 bp TTGATTCTGGAAACCCATCATCTGCCTCAGCATCCCCTGGTCCACTaGCTATACTGGAACTATCCAGACCAATATGCAAGGCTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: LILETHHLPQHPLVH*LYWNYPDQYARLGV
Trigger: AACTCCAAGCCTTGCATATTGGTCTGGATAGTTCCAGTATAGGCAGTGGACCAGGGGATGCTGAGGCAGATGATGGGTTTCCAGAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGAACCACCCAGGGGCTATaGGCAAAGGCCATAATATCT +
Preference number: 5 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGTTQGL*AKAIIS
Trigger: AGATATTATGGCCTTTGCCAATAGCCCCTGGGTGGT...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTAGCAAGCTCTCCACGTaGATGGGGGAGCGAGGGTCT +
Preference number: 5 (lower is better)
Translates to: NQSLLVQPVASKEPRFVISKLST*MGERGS
Trigger: AGACCCTCGCTCCCCCATCAACGTGGAGAGCTTGCT...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS CCA 90 bp CTAGGTTTGTTTGGGGCAAGCTGTCGACTTGGCCGTCTAATAGACTaGTTTTGCTGTATCTTCATTGAAGTTCTAGGAGATGATCGGGCA +
Preference number: 5 (lower is better)
Translates to: LGLFGASCRLGRLID*FCCIFIEVLGDDRA
Trigger: TGCCCGATCATCTCCTAGAACTTCAATGAAGATACAGCAAAACCAGTCTATTAGACGGCCAAGTCGACAGCTTGCCCCAAACAAACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCACCACCCAGGGGCTATaGGCAAAGGCCATAATATCT +
Preference number: 5 (lower is better)
Translates to: WDHENTARMSCVNCNFDSTTQGL*AKAIIS
Trigger: AGATATTATGGCCTTTGCCAATAGCCCCTGGGTGGT...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCAGCAAGCTCTCCACGTaGATGGGGGAGCGAGGGTCT +
Preference number: 5 (lower is better)
Translates to: FSLSNCLNADSTLFRKVISKLST*MGERGS
Trigger: AGACCCTCGCTCCCCCATCAACGTGGAGAGCTTGCT...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGATCAATGTCATCGAAATaGCTGCTGTCTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGSMSSK*LLSMSL
Trigger: CAGTGACATAGACAGCAGCAATTTCGATGACATTGA...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCTGTTCCAGTTCCTCTTaGGCTTGCATCTCATTGCTA +
Preference number: 5 (lower is better)
Translates to: VSEFLYFTTRILEESNSSCSSSS*ACISLL
Trigger: TAGCAATGAGATGCAAGCCAAAGAGGAACTGGAACA...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS TCA 90 bp GGTACTACAGGAGCTGCCGTTTCTCTTATGTTATCCCAATGCCACTaGTCATTCTTAAAGAAAGGATGCTGTCTGATTTCTTCCACCCCA +
Preference number: 5 (lower is better)
Translates to: GTTGAAVSLMLSQCH*SFLKKGCCLISSTP
Trigger: TGGGGTGGAAGAAATCAGACAGCATCCTTTCTTTAAGAATGATCAGTGGCATTGGGATAACATAAGAGAAACGGCAGCTCCTGTAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261535.7
ENST00000315872.11
ENST00000401753.5
ENST00000431087.1
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTGTGCATTGTAGTGTGAGCGACTGCCGAGAGAGCTTTATGGAAAAGTCTGGAGTTTCTACATCTCCTTaGTCATCTTCAATGTCATCG +
Preference number: 5 (lower is better)
Translates to: CVHCSVSDCRESFMEKSGVSTSP*SSSMSS
Trigger: CGATGACATTGAAGATGACAAAGGAGATGTAGAAAC...TCCAGACTTTTCCATAAAGCTCTCTCGGCAGTCGCTCACACTACAATGCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCAAATGCTAGGTTGGGAACTTCTCTCTaGGGTAGATGTAGTACTCCA +
Preference number: 5 (lower is better)
Translates to: EERLGTSLLGRCSTPNARLGTSL*GRCSTP
Trigger: TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAA...CCTAGCATTTGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp GAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCAAATGCTAGGTTGGTAGAAGAAAGGTaGGGAACTTCTCTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: EERLGTSLLGRCSTPNARLVEER*GTSLLG
Trigger: ACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAA...CCTAGCATTTGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp GAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCAAATGCTAGGTGTTCCAGTTCCTCTTaGGCTTGCATCTCATTGCTA +
Preference number: 5 (lower is better)
Translates to: EERLGTSLLGRCSTPNARCSSSS*ACISLL
Trigger: TAGCAATGAGATGCAAGCCAAAGAGGAACTGGAACA...CCTAGCATTTGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCGTGTCATTACCACGCTaGACAGGTTCTTTTCGATTC +
Preference number: 5 (lower is better)
Translates to: WDHENTARMSCVNCNFDSVSLPR*TGSFRF
Trigger: GAATCGAAAAGAACCTGTCAAGCGTGGTAATGACAC...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCGCTCTCTTCAGCTATTaGTGCCTGCATTTCATTCAG +
Preference number: 5 (lower is better)
Translates to: WDHENTARMSCVNCNFDSALFSY*CLHFIQ
Trigger: CTGAATGAAATGCAGGCACAAATAGCTGAAGAGAGC...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCAGCAAGCTCGGCAGTGACTaGCTCAAATCAGATTTTAGA +
Preference number: 5 (lower is better)
Translates to: SEFLYFTTRILEESNSSSKLGSD*LKSDFR
Trigger: TCTAAAATCTGATTTGAGCAAGTCACTGCCGAGCTT...GCTGCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CAA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGGTTCGCAGTAAAGCATaGGTTTCATCCAGTTGTCTC +
Preference number: 5 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMVRSKA*VSSSCL
Trigger: GAGACAACTGGATGAAACCAATGCTTTACTGCGAAC...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CAA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTCCGTAAGTTCCTGTTaGTGTCTAGCCATCATCTCT +
Preference number: 5 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLSVSSC*CLAIIS
Trigger: AGAGATGATGGCTAGACACAAACAGGAACTTACGGA...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGGTGTCATTACCACGCTaGACAGGTTCTTTTCGATTC +
Preference number: 5 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLVSLPR*TGSFRF
Trigger: GAATCGAAAAGAACCTGTCAAGCGTGGTAATGACAC...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GTGTCCGAGTTTCTCTACTTTACCACCAGAATCCTAGAAGAGAGTAACAGCAGCGGTGAAACCTCTCTGTaGAAGCTAGAAAAGATGTTT +
Preference number: 5 (lower is better)
Translates to: VSEFLYFTTRILEESNSSGETSL*KLEKMF
Trigger: AAACATCTTTTCTAGCTTCAACAGAGAGGTTTCACC...GCTGCTGTTACTCTCTTCTAGGATTCTGGTGGTAAAGTAGAGAAACTCGGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS GCA 90 bp TGGGCAGCCAAAGAGTCCCGTTCATCCTGTAATTCCTGTTTCTTCTaGTGCAATTCTTTACCAAGTTTGGTCTTTTCTTCACATTCTTCT +
Preference number: 5 (lower is better)
Translates to: WAAKESRSSCNSCFF*CNSLPSLVFSSHSS
Trigger: AGAAGAATGTGAAGAAAAGACCAAACTTGGTAAAGAATTGCAGCAGAAGAAACAGGAATTACAGGATGAACGGGACTCTTTGGCTGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCAAACCCATGGAGTGTATaGCATCCAGAGCAAGAACAA +
Preference number: 5 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPNPWSV*HPEQEQ
Trigger: TTGTTCTTGCTCTGGATGCAATACACTCCATGGGTT...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCACAGTTCCTCTTTGGCTaGCATCTCATTGCTAAGATG +
Preference number: 5 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPQFLFG*HLIAKM
Trigger: CATCTTAGCAATGAGATGCAAGCCAAAGAGGAACTG...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTTGTTCCAGTTCCTCTTaGGCTTGCATCTCATTGCTA +
Preference number: 5 (lower is better)
Translates to: DHENTARMSCVNCNFDSICSSSS*ACISLL
Trigger: TAGCAATGAGATGCAAGCCAAAGAGGAACTGGAACA...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTCTGCTAGTCGTGCCTTaGTGGCCTTATGTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPLLVVP*WPYVQL
Trigger: AAGCTGAACATAAGGCCACAAAGGCACGACTAGCAG...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGCTGCTAGTCGTGCCTTaGTGGCCTTATGTTCAGCTT +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRLLVVP*WPYVQL
Trigger: AAGCTGAACATAAGGCCACAAAGGCACGACTAGCAG...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTTCCGTAAGTTCCTGTTaGTGTCTAGCCATCATCTCT +
Preference number: 5 (lower is better)
Translates to: DHENTARMSCVNCNFDSISVSSC*CLAIIS
Trigger: AGAGATGATGGCTAGACACAAACAGGAACTTACGGA...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCACTTTACGCTTACCATaGCTGCATATTGTTGCAGTA +
Preference number: 5 (lower is better)
Translates to: WDHENTARMSCVNCNFDSTLRLP*LHIVAV
Trigger: TACTGCAACAATATGCAGCAATGGTAAGCGTAAAGT...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS CCA 90 bp GCTTCTTCTCCATTTCTTTCATGGCTTCTGATTTGGCTTCTTCGATaGACTCATAGATCTTATTTTTATCTGCTAGTCGTGCCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: ASSPFLSWLLIWLLR*THRSYFYLLVVPLW
Trigger: CCACAAAGGCACGACTAGCAGATAAAAATAAGATCTATGAGTCCATCGAAGAAGCCAAATCAGAAGCCATGAAAGAAATGGAGAAGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TTTTCTCTTTCTAACTGTCTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCACCACCCAGGGGCTATaGGCAAAGGCCATAATATCT +
Preference number: 5 (lower is better)
Translates to: FSLSNCLNADSTLFRKVITTQGL*AKAIIS
Trigger: AGATATTATGGCCTTTGCCAATAGCCCCTGGGTGGT...GATTACCTTACGGAAAAGTGTGGAATCAGCATTAAGACAGTTAGAAAGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGAACCCATGGAGTGTATaGCATCCAGAGCAAGAACAA +
Preference number: 5 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSNPWSV*HPEQEQ
Trigger: TTGTTCTTGCTCTGGATGCAATACACTCCATGGGTT...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CAA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTAACCCATGGAGTGTATaGCATCCAGAGCAAGAACAA +
Preference number: 5 (lower is better)
Translates to: NQSLLVQPVASKEPRFVINPWSV*HPEQEQ
Trigger: TTGTTCTTGCTCTGGATGCAATACACTCCATGGGTT...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCATCAATGTCATCGAAATaGCTGCTGTCTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPSMSSK*LLSMSL
Trigger: CAGTGACATAGACAGCAGCAATTTCGATGACATTGA...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp GAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCAAATGCTAGGTTGGCTTGCATCTCATaGCTAAGATGTTCTTCTAAT +
Preference number: 5 (lower is better)
Translates to: EERLGTSLLGRCSTPNARLACIS*LRCSSN
Trigger: ATTAGAAGAACATCTTAGCAATGAGATGCAAGCCAA...CCTAGCATTTGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp AATTTGGTAGAAGAAAGGTTGGGAACTTCTCTCTTGGGTAGATGTAGTACTCCACGAGTATTAACAGATTaGCACTTCTGTTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: NLVEERLGTSLLGRCSTPRVLTD*HFCSSS
Trigger: GGAACTGGAACAGAAGTGCAAATCTGTTAATACTCG...TGGAGTACTACATCTACCCAAGAGAGAAGTTCCCAACCTTTCTTCTACCAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTCGAGTATTAACAGATTaGCACTTCTGTTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: DHENTARMSCVNCNFDSIRVLTD*HFCSSS
Trigger: GGAACTGGAACAGAAGTGCAAATCTGTTAATACTCG...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTTTTTCAAGTTTTAACTaGGCAGTCTCCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIFSSFN*AVSSRQ
Trigger: CTGCCTGCTGGAGACTGCCAAGTTAAAACTTGAAAA...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGCTCAGAATCTGCTTaGGTCAAGGTGATCTCCAGT +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPCSESA*VKVISS
Trigger: ACTGGAGATCACCTTGACCAAAGCAGATTCTGAGCA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGGGATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCTTCTCATTTGCAAGATaGGCAACATCACTAGTTAGT +
Preference number: 5 (lower is better)
Translates to: WDHENTARMSCVNCNFDSFSFAR*ATSLVS
Trigger: ACTAACTAGTGATGTTGCCAATCTTGCAAATGAGAA...GCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGGCTCTCTTCAGCTATTaGTGCCTGCATTTCATTCAG +
Preference number: 5 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSALFSY*CLHFIQ
Trigger: CTGAATGAAATGCAGGCACAAATAGCTGAAGAGAGC...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CAA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTGCCATCCTTCTAATCTaGATTCTGGAAACCCATCAT +
Preference number: 5 (lower is better)
Translates to: DHENTARMSCVNCNFDSIAILLI*ILETHH
Trigger: ATGATGGGTTTCCAGAATCAAGATTAGAAGGATGGC...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGGGTGAAACCTCTCTGTaGAAGCTAGAAAAGATGTTT +
Preference number: 5 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLGETSL*KLEKMF
Trigger: AAACATCTTTTCTAGCTTCAACAGAGAGGTTTCACC...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp CCTTCATATGAATCTTCCTTGTACAGTTGGTCACACCATGATTCCCCATATTCTTGGGAAGAAAACACATaGATAGGTGCATGCACTCAT +
Preference number: 5 (lower is better)
Translates to: PSYESSLYSWSHHDSPYSWEENT*IGACTH
Trigger: ATGAGTGCATGCACCTATCAATGTGTTTTCTTCCCA...AGAATATGGGGAATCATGGTGTGACCAACTGTACAAGGAAGATTCATATGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGCTTCTTCTCTACACCTaGCTCTCCTTAACCACCCTT +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRLLLYT*LSLTTL
Trigger: AAGGGTGGTTAAGGAGAGCAAGGTGTAGAGAAGAAG...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401753.5
CDS GCA 90 bp CGTGCCTTTGTGGCCTTATGTTCAGCTTCTTCTTGTTCTAGGCTCTaGTGTATAACTTTTAGTTGGTATGTCATATCTATTTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: RAFVALCSASSCSRL*CITFSWYVISISML
Trigger: CAACATGGAAATAGATATGACATACCAACTAAAAGTTATACAGCAGAGCCTAGAACAAGAAGAAGCTGAACATAAGGCCACAAAGGCACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS GCA 90 bp GCAGCCAAAGAGTCCCGTTCATCCTGTAATTCCTGTTTCTTCTGCTaGAATTCTTTACCAAGTTTGGTCTTTTCTTCACATTCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: AAKESRSSCNSCFFC*NSLPSLVFSSHSSL
Trigger: TAAAGAAGAATGTGAAGAAAAGACCAAACTTGGTAAAGAATTGCAGCAGAAGAAACAGGAATTACAGGATGAACGGGACTCTTTGGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS GCA 90 bp GGCTTTTTAGGTATCTTTTTCACCAACCGACTAACCCACTTCTGCTaGTCTTCTGTAGAATTTGCTAGTAATAACAGATTCTTTGCCGTT +
Preference number: 5 (lower is better)
Translates to: GFLGIFFTNRLTHFC*SSVEFASNNRFFAV
Trigger: AACGGCAAAGAATCTGTTATTACTAGCAAATTCTACAGAAGAGCAGCAGAAGTGGGTTAGTCGGTTGGTGAAAAAGATACCTAAAAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp CTTAATGCTGATTCCACACTTTTCCGTAAGGTAATCTCCTCTTCTAGCTCCTTTGTTTCTACATCTCCTTaGTCATCTTCAATGTCATCG +
Preference number: 5 (lower is better)
Translates to: LNADSTLFRKVISSSSSFVSTSP*SSSMSS
Trigger: CGATGACATTGAAGATGACAAAGGAGATGTAGAAAC...AAAGGAGCTAGAAGAGGAGATTACCTTACGGAAAAGTGTGGAATCAGCATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261535.7
CDS-3UTR CAA 90 bp CTATCAACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTTGGCTTGCATCTCATaGCTAAGATGTTCTTCTAAT +
Preference number: 5 (lower is better)
Translates to: LSTNHCWFNLLLQRSPDLLACIS*LRCSSN
Trigger: ATTAGAAGAACATCTTAGCAATGAGATGCAAGCCAA...CAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTTGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGCAGTTCCTCTTTGGCTaGCATCTCATTGCTAAGATG +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRQFLFG*HLIAKM
Trigger: CATCTTAGCAATGAGATGCAAGCCAAAGAGGAACTG...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTGTTCCAGTTCCTCTTaGGCTTGCATCTCATTGCTA +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRCSSSS*ACISLL
Trigger: TAGCAATGAGATGCAAGCCAAAGAGGAACTGGAACA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTATTGGTTTCATCCAGTaGTCTCTGGAGTTGATTCAC +
Preference number: 5 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIIGFIQ*SLELIH
Trigger: GTGAATCAACTCCAGAGACAACTGGATGAAACCAAT...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTGTTCGCAGTAAAGCATaGGTTTCATCCAGTTGTCTC +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPVRSKA*VSSSCL
Trigger: GAGACAACTGGATGAAACCAATGCTTTACTGCGAAC...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTTTTCAAGTTTTAACTaGGCAGTCTCCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPFSSFN*AVSSRQ
Trigger: CTGCCTGCTGGAGACTGCCAAGTTAAAACTTGAAAA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTTCATGGCTTCTGATTaGGCTTCTTCGATGGACTCA +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPFMASD*ASSMDS
Trigger: TGAGTCCATCGAAGAAGCCAAATCAGAAGCCATGAA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATGCTCAGAATCTGCTTaGGTCAAGGTGATCTCCAGT +
Preference number: 5 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRCSESA*VKVISS
Trigger: ACTGGAGATCACCTTGACCAAAGCAGATTCTGAGCA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTGCTCAGAATCTGCTTaGGTCAAGGTGATCTCCAGT +
Preference number: 5 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNCSESA*VKVISS
Trigger: ACTGGAGATCACCTTGACCAAAGCAGATTCTGAGCA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTCCGTAAGTTCCTGTTaGTGTCTAGCCATCATCTCT +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRSVSSC*CLAIIS
Trigger: AGAGATGATGGCTAGACACAAACAGGAACTTACGGA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTGCTCTCTTCAGCTATTaGTGCCTGCATTTCATTCAG +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPALFSY*CLHFIQ
Trigger: CTGAATGAAATGCAGGCACAAATAGCTGAAGAGAGC...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AGCATGATATCCAGCGCTGTCACACAGTGCTTATGTTCAAAGTGCTTACAAATGGCTAATTTTTGTATATaGGTAGAGACGGAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: SMISSAVTQCLCSKCLQMANFCI*VETEFH
Trigger: GTGAAACTCCGTCTCTACCAATATACAAAAATTAGC...CATTTGTAAGCACTTTGAACATAAGCACTGTGTGACAGCGCTGGATATCATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGTCAATGTCATCGAAATaGCTGCTGTCTATGTCACTG +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRSMSSK*LLSMSL
Trigger: CAGTGACATAGACAGCAGCAATTTCGATGACATTGA...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCAGTTCCTCTTTGGCTaGCATCTCATTGCTAAGATG +
Preference number: 5 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNQFLFG*HLIAKM
Trigger: CATCTTAGCAATGAGATGCAAGCCAAAGAGGAACTG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTCAGTTCCTCTTTGGCTaGCATCTCATTGCTAAGATG +
Preference number: 5 (lower is better)
Translates to: WKSLEELHISLVYQPIIVQFLFG*HLIAKM
Trigger: CATCTTAGCAATGAGATGCAAGCCAAAGAGGAACTG...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGCGAGTATTAACAGATTaGCACTTCTGTTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRRVLTD*HFCSSS
Trigger: GGAACTGGAACAGAAGTGCAAATCTGTTAATACTCG...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGATTGGTTTCATCCAGTaGTCTCTGGAGTTGATTCAC +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRIGFIQ*SLELIH
Trigger: GTGAATCAACTCCAGAGACAACTGGATGAAACCAAT...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGTTCGCAGTAAAGCATaGGTTTCATCCAGTTGTCTC +
Preference number: 5 (lower is better)
Translates to: WKSLEELHISLVYQPIIVVRSKA*VSSSCL
Trigger: GAGACAACTGGATGAAACCAATGCTTTACTGCGAAC...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAGCTGCTGAATCTGTTTaGAACTTTCTGCCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRAAESV*NFLPGF
Trigger: AAACCCAGGCAGAAAGTTCAAAACAGATTCAGCAGC...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGCTGCTGAATCTGTTTaGAACTTTCTGCCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNAAESV*NFLPGF
Trigger: AAACCCAGGCAGAAAGTTCAAAACAGATTCAGCAGC...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTTTTTCAAGTTTTAACTaGGCAGTCTCCAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: VKIVHDLSSTKLVYILRAFSSFN*AVSSRQ
Trigger: CTGCCTGCTGGAGACTGCCAAGTTAAAACTTGAAAA...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTTTCATGGCTTCTGATTaGGCTTCTTCGATGGACTCA +
Preference number: 5 (lower is better)
Translates to: WKSLEELHISLVYQPIIVFMASD*ASSMDS
Trigger: TGAGTCCATCGAAGAAGCCAAATCAGAAGCCATGAA...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTTTCATGGCTTCTGATTaGGCTTCTTCGATGGACTCA +
Preference number: 5 (lower is better)
Translates to: VKIVHDLSSTKLVYILRAFMASD*ASSMDS
Trigger: TGAGTCCATCGAAGAAGCCAAATCAGAAGCCATGAA...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTCTTCATCTTTCAATCTaGACAGTTGCTCTTGAACAT +
Preference number: 5 (lower is better)
Translates to: DHENTARMSCVNCNFDSILHLSI*TVALEH
Trigger: ATGTTCAAGAGCAACTGTCAAGATTGAAAGATGAAG...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGTGTCATTACCACGCTaGACAGGTTCTTTTCGATTC +
Preference number: 5 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNVSLPR*TGSFRF
Trigger: GAATCGAAAAGAACCTGTCAAGCGTGGTAATGACAC...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGGCCATCCTTCTAATCTaGATTCTGGAAACCCATCAT +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRAILLI*ILETHH
Trigger: ATGATGGGTTTCCAGAATCAAGATTAGAAGGATGGC...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GATCATGAGAATACGGCAAGAATGTCCTGCGTAAACTGTAACTTTGACAGCATTTTACTTTCTCCTTCATaGGCATACAGAATCTGGAAT +
Preference number: 5 (lower is better)
Translates to: DHENTARMSCVNCNFDSILLSPS*AYRIWN
Trigger: ATTCCAGATTCTGTATGCCAATGAAGGAGAAAGTAA...AATGCTGTCAAAGTTACAGTTTACGCAGGACATTCTTGCCGTATTCTCATGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TACATTAATTTCAACAGTAATACCGGCACCAGTTTTCCTTTCACTTCTGTCTCGTCATATGAATCTTCCTaGTACAGTTGGTCACACCAT +
Preference number: 5 (lower is better)
Translates to: YINFNSNTGTSFPFTSVSSYESS*YSWSHH
Trigger: ATGGTGTGACCAACTGTACAAGGAAGATTCATATGA...CGAGACAGAAGTGAAAGGAAAACTGGTGCCGGTATTACTGTTGAAATTAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGGTTTCTACATCTCCTTaGTCATCTTCAATGTCATCG +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRVSTSP*SSSMSS
Trigger: CGATGACATTGAAGATGACAAAGGAGATGTAGAAAC...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATCGAGTATTAACAGATTaGCACTTCTGTTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNRVLTD*HFCSSS
Trigger: GGAACTGGAACAGAAGTGCAAATCTGTTAATACTCG...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATATTGGTTTCATCCAGTaGTCTCTGGAGTTGATTCAC +
Preference number: 5 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNIGFIQ*SLELIH
Trigger: GTGAATCAACTCCAGAGACAACTGGATGAAACCAAT...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTAAATCTCTCCTGAAGTaGTCTCTTCTCCAGTTCTAC +
Preference number: 5 (lower is better)
Translates to: WKSLEELHISLVYQPIIVKSLLK*SLLQFY
Trigger: GTAGAACTGGAGAAGAGACAACTTCAGGAGAGATTT...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAAATCTCTCCTGAAGTaGTCTCTTCTCCAGTTCTAC +
Preference number: 5 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRKSLLK*SLLQFY
Trigger: GTAGAACTGGAGAAGAGACAACTTCAGGAGAGATTT...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTGTTAACCTGTTGTGTTaGCATCTTCAGGTCATTTTG +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPVNLLC*HLQVIL
Trigger: CAAAATGACCTGAAGATGCAAACACAACAGGTTAAC...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGGTTAACCTGTTGTGTTaGCATCTTCAGGTCATTTTG +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRVNLLC*HLQVIL
Trigger: CAAAATGACCTGAAGATGCAAACACAACAGGTTAAC...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTCCAAATTTCTTAGTGTaGTTTCGTACAGGCAATGAA +
Preference number: 5 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIPNFLV*FRTGNE
Trigger: TTCATTGCCTGTACGAAACAACACTAAGAAATTTGG...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTATCAACCAATCATTGTaGGTTCAACCTGTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: EELHISLVYQPIIVGSTCINQSL*VQPVAS
Trigger: TGAAGCAACAGGTTGAACCAACAATGATTGGTTGAT...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTCATTGCTGCATATTGTaGCAGTATAAAACACACACT +
Preference number: 5 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIHCCIL*QYKTHT
Trigger: AGTGTGTGTTTTATACTGCAACAATATGCAGCAATG...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTACTTTACGCTTACCATaGCTGCATATTGTTGCAGTA +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPTLRLP*LHIVAV
Trigger: TACTGCAACAATATGCAGCAATGGTAAGCGTAAAGT...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp AACCAATCATTGTTGGTTCAACCTGTTGCTTCAAAGGAGCCCAGATTTGTAATTGCTAATTTTTGTATATaGGTAGAGACGGAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: NQSLLVQPVASKEPRFVIANFCI*VETEFH
Trigger: GTGAAACTCCGTCTCTACCAATATACAAAAATTAGC...AATTACAAATCTGGGCTCCTTTGAAGCAACAGGTTGAACCAACAATGATTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGAGTCTTATATTTATCTaGGAAGCTTCAGGGCCTCAA +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRSLIFI*EASGPQ
Trigger: TTGAGGCCCTGAAGCTTCCAAGATAAATATAAGACT...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CAA 90 bp GAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGGTTCAACCTGTGCACTAACCTTTACTTaGGCTTTACTGGTATGCTTA +
Preference number: 5 (lower is better)
Translates to: EELHISLVYQPIIVGSTCALTFT*ALLVCL
Trigger: TAAGCATACCAGTAAAGCCAAAGTAAAGGTTAGTGC...ACAGGTTGAACCAACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS CCA 90 bp AAACTCATGTCCCTTGTGGCAAATATAATTAGATTTTTCTCCAACTaGCTCCACTGGAAATTCTTGTTCCTTCTTACTTTCTCCTTCATT +
Preference number: 5 (lower is better)
Translates to: KLMSLVANIIRFFSN*LHWKFLFLLTFSFI
Trigger: AATGAAGGAGAAAGTAAGAAGGAACAAGAATTTCCAGTGGAGCCAGTTGGAGAAAAATCTAATTATATTTGCCACAAGGGACATGAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTGTTTCTACATCTCCTTaGTCATCTTCAATGTCATCG +
Preference number: 5 (lower is better)
Translates to: WKSLEELHISLVYQPIIVVSTSP*SSSMSS
Trigger: CGATGACATTGAAGATGACAAAGGAGATGTAGAAAC...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGTTAACCTGTTGTGTTaGCATCTTCAGGTCATTTTG +
Preference number: 5 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNVNLLC*HLQVIL
Trigger: CAAAATGACCTGAAGATGCAAACACAACAGGTTAAC...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTTCTCATTTGCAAGATaGGCAACATCACTAGTTAGT +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPFSFAR*ATSLVS
Trigger: ACTAACTAGTGATGTTGCCAATCTTGCAAATGAGAA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTATTCTTCTTTCTCATTaGCAAGATTGGCAACATCAC +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPILLSH*QDWQHH
Trigger: GTGATGTTGCCAATCTTGCAAATGAGAAAGAAGAAT...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTCTTCATCTTTCAATCTaGACAGTTGCTCTTGAACAT +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPLHLSI*TVALEH
Trigger: ATGTTCAAGAGCAACTGTCAAGATTGAAAGATGAAG...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAAGGCTTCATCTTTCAATCTaGACAGTTGCTCTTGAACAT +
Preference number: 5 (lower is better)
Translates to: CFHWKNTITLNNDCFHRRLHLSI*TVALEH
Trigger: ATGTTCAAGAGCAACTGTCAAGATTGAAAGATGAAG...CCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTCCAAATTTCTTAGTGTaGTTTCGTACAGGCAATGAA +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPPNFLV*FRTGNE
Trigger: TTCATTGCCTGTACGAAACAACACTAAGAAATTTGG...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp AATTTTGGGCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTTACTTTCTCCTTCATaGGCATACAGAATCTGGAAT +
Preference number: 5 (lower is better)
Translates to: NFGPSYFSLVFTGRIRSPLLSPS*AYRIWN
Trigger: ATTCCAGATTCTGTATGCCAATGAAGGAGAAAGTAA...AGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGCCCAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTATCAACCAATCATTGTaGGTTCAACCTGTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: VKIVHDLSSTKLVYILRAINQSL*VQPVAS
Trigger: TGAAGCAACAGGTTGAACCAACAATGATTGGTTGAT...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTTTGGCTTGCATCTCATaGCTAAGATGTTCTTCTAAT +
Preference number: 5 (lower is better)
Translates to: VKIVHDLSSTKLVYILRALACIS*LRCSSN
Trigger: ATTAGAAGAACATCTTAGCAATGAGATGCAAGCCAA...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGATTGGCTTGCATCTCATaGCTAAGATGTTCTTCTAAT +
Preference number: 5 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRLACIS*LRCSSN
Trigger: ATTAGAAGAACATCTTAGCAATGAGATGCAAGCCAA...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTTTCTCATTTGCAAGATaGGCAACATCACTAGTTAGT +
Preference number: 5 (lower is better)
Translates to: VKIVHDLSSTKLVYILRAFSFAR*ATSLVS
Trigger: ACTAACTAGTGATGTTGCCAATCTTGCAAATGAGAA...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GTTAGTTTTAAAGGCACTAACCTTTACTTTGGCTTTACTGGTATGCTTATCCATATTCTTCTTTCTCATTaGCAAGATTGGCAACATCAC +
Preference number: 5 (lower is better)
Translates to: VSFKGTNLYFGFTGMLIHILLSH*QDWQHH
Trigger: GTGATGTTGCCAATCTTGCAAATGAGAAAGAAGAAT...ATGGATAAGCATACCAGTAAAGCCAAAGTAAAGGTTAGTGCCTTTAAAACTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS-3UTR CAA 90 bp TCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATGACTGCTTTCATAGAATTCTTCTTTCTCATTaGCAAGATTGGCAACATCAC +
Preference number: 5 (lower is better)
Translates to: SCFHWKNTITLNNDCFHRILLSH*QDWQHH
Trigger: GTGATGTTGCCAATCTTGCAAATGAGAAAGAAGAAT...TCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp GTAAAAATAGTGCACGATTTATCTTCCACAAAGCTAGTTTACATCCTAAGAGCTCCAAATTTCTTAGTGTaGTTTCGTACAGGCAATGAA +
Preference number: 5 (lower is better)
Translates to: VKIVHDLSSTKLVYILRAPNFLV*FRTGNE
Trigger: TTCATTGCCTGTACGAAACAACACTAAGAAATTTGG...AGCTCTTAGGATGTAAACTAGCTTTGTGGAAGATAAATCGTGCACTATTTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS-3UTR CAA 90 bp GCCATCATATTTCAGTCTTGTTTTCACTGGAAGAATACGATCACCTTGAATAATTTACTTTCTCCTTCATaGGCATACAGAATCTGGAAT +
Preference number: 5 (lower is better)
Translates to: AIIFQSCFHWKNTITLNNLLSPS*AYRIWN
Trigger: ATTCCAGATTCTGTATGCCAATGAAGGAGAAAGTAA...ATTATTCAAGGTGATCGTATTCTTCCAGTGAAAACAAGACTGAAATATGATGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS-3UTR CAA 90 bp TGGAAAAGTCTGGAAGAGTTGCATATATCCTTAGTCTATCAACCAATCATTGTTCATTGCTGCATATTGTaGCAGTATAAAACACACACT +
Preference number: 5 (lower is better)
Translates to: WKSLEELHISLVYQPIIVHCCIL*QYKTHT
Trigger: AGTGTGTGTTTTATACTGCAACAATATGCAGCAATG...AACAATGATTGGTTGATAGACTAAGGATATATGCAACTCTTCCAGACTTTTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS GCA 72 bp CCCAGGCCTGGGCCACTACGGCCGCCGCCGGCCCGCTaGCATGGTCGCCGCCGGCCGCCTTGCAGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: PRPGPLRPPPAR*HGRRRPPCSPS
Trigger: TGAGGGACTGCAAGGCGGCCGGCGGCGACCATGGCAGCGGGCCGGCGGCGGCCGTAGTGGCCCAGGCCTGGG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315872.11
CDS CCA 72 bp GAGCGAGGGTCTCGGATCAGCGCCTCCAGCTTCCTCTaGCGGCTCGCGCCTGCCCCGTCCCCCGGCGCGGTC +
Preference number: 6 (lower is better)
Translates to: ERGSRISASSFL*RLAPAPSPGAV
Trigger: GACCGCGCCGGGGGACGGGGCAGGCGCGAGCCGCCAGAGGAAGCTGGAGGCGCTGATCCGAGACCCTCGCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261535.7
ENST00000315872.11
ENST00000616279.4
CDS CCA 72 bp CCCCGCCCCTCAGTCAGATTCGCGCCGCCGGTCCGCTaGTCCTCAGCGAGTGCCCGCAGGAGTCCTCGGGCG +
Preference number: 6 (lower is better)
Translates to: PRPSVRFAPPVR*SSASARRSPRA
Trigger: CGCCCGAGGACTCCTGCGGGCACTCGCTGAGGACCAGCGGACCGGCGGCGCGAATCTGACTGAGGGGCGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315872.11
ENST00000616279.4
CDS TCA 72 bp CCAAGGAATTTAAGCCATCCAGCAAGCTCTCCACGTTaGTGGGGGAGCGAGGGTCTCGGATCAGCGCCTCCA +
Preference number: 6 (lower is better)
Translates to: PRNLSHPASSPR*WGSEGLGSAPP
Trigger: TGGAGGCGCTGATCCGAGACCCTCGCTCCCCCATCAACGTGGAGAGCTTGCTGGATGGCTTAAATTCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261535.7
ENST00000315872.11
ENST00000616279.4
CDS CAA 72 bp ACCAAGGAATTTAAGCCATCCAGCAAGCTCTCCACGTaGATGGGGGAGCGAGGGTCTCGGATCAGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: TKEFKPSSKLST*MGERGSRISAS
Trigger: GGAGGCGCTGATCCGAGACCCTCGCTCCCCCATCAACGTGGAGAGCTTGCTGGATGGCTTAAATTCCTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261535.7
ENST00000315872.11
ENST00000616279.4
CDS TCA 72 bp AACGAGCCAGTTGCTCAGAATCTGCTTTGGTCAAGGTaGTCTCCAGTTGGGCAGCCAAAGAGTCCCGTTCAT +
Preference number: 6 (lower is better)
Translates to: NEPVAQNLLWSR*SPVGQPKSPVH
Trigger: ATGAACGGGACTCTTTGGCTGCCCAACTGGAGATCACCTTGACCAAAGCAGATTCTGAGCAACTGGCTCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS GCA 72 bp GAAACCCATCATCTGCCTCAGCATCCCCTGGTCCACTaGCTATACTGGAACTATCCAGACCAATATGCAAGG +
Preference number: 6 (lower is better)
Translates to: ETHHLPQHPLVH*LYWNYPDQYAR
Trigger: CCTTGCATATTGGTCTGGATAGTTCCAGTATAGGCAGTGGACCAGGGGATGCTGAGGCAGATGATGGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CCA 72 bp CATCTGCCTCAGCATCCCCTGGTCCACTGCCTATACTaGAACTATCCAGACCAATATGCAAGGCTTGGAGTT +
Preference number: 6 (lower is better)
Translates to: HLPQHPLVHCLY*NYPDQYARLGV
Trigger: AACTCCAAGCCTTGCATATTGGTCTGGATAGTTCCAGTATAGGCAGTGGACCAGGGGATGCTGAGGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CCA 72 bp TGCTCAGAATCTGCTTTGGTCAAGGTGATCTCCAGTTaGGCAGCCAAAGAGTCCCGTTCATCCTGTAATTCC +
Preference number: 6 (lower is better)
Translates to: CSESALVKVISS*AAKESRSSCNS
Trigger: GGAATTACAGGATGAACGGGACTCTTTGGCTGCCCAACTGGAGATCACCTTGACCAAAGCAGATTCTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CAA 72 bp TCAGCAATTGAACGAGCCAGTTGCTCAGAATCTGCTTaGGTCAAGGTGATCTCCAGTTGGGCAGCCAAAGAG +
Preference number: 6 (lower is better)
Translates to: SAIERASCSESA*VKVISSWAAKE
Trigger: CTCTTTGGCTGCCCAACTGGAGATCACCTTGACCAAAGCAGATTCTGAGCAACTGGCTCGTTCAATTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS TCA 72 bp GGAACTATCCAGACCAATATGCAAGGCTTGGAGTTGTaGCCGCAGCTGCTCAATGTCACTGTCTTTACTGTC +
Preference number: 6 (lower is better)
Translates to: GTIQTNMQGLEL*PQLLNVTVFTV
Trigger: GACAGTAAAGACAGTGACATTGAGCAGCTGCGGTCACAACTCCAAGCCTTGCATATTGGTCTGGATAGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CCA 72 bp CCTATACTGGAACTATCCAGACCAATATGCAAGGCTTaGAGTTGTGACCGCAGCTGCTCAATGTCACTGTCT +
Preference number: 6 (lower is better)
Translates to: PILELSRPICKA*SCDRSCSMSLS
Trigger: AGACAGTGACATTGAGCAGCTGCGGTCACAACTCCAAGCCTTGCATATTGGTCTGGATAGTTCCAGTATAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS GCA 72 bp TTCGAGCTGATCCTGGAGCTCTTTCATTTGCCCATCTaGATCCTGACGTTCTTTTCGAAGTTCAGCATTTTG +
Preference number: 6 (lower is better)
Translates to: FELILELFHLPI*ILTFFSKFSIL
Trigger: CAAAATGCTGAACTTCGAAAAGAACGTCAGGATGCAGATGGGCAAATGAAAGAGCTCCAGGATCAGCTCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS GCA 72 bp GCAAGCTGTCGACTTGGCCGTCTAATAGACTGGTTTTaGTGTATCTTCATTGAAGTTCTAGGAGATGATCGG +
Preference number: 6 (lower is better)
Translates to: ASCRLGRLIDWF*CIFIEVLGDDR
Trigger: CCGATCATCTCCTAGAACTTCAATGAAGATACAGCAAAACCAGTCTATTAGACGGCCAAGTCGACAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CCA 72 bp CAGTTAGCTAGGTTTGTTTGGGGCAAGCTGTCGACTTaGCCGTCTAATAGACTGGTTTTGCTGTATCTTCAT +
Preference number: 6 (lower is better)
Translates to: QLARFVWGKLST*PSNRLVLLYLH
Trigger: ATGAAGATACAGCAAAACCAGTCTATTAGACGGCCAAGTCGACAGCTTGCCCCAAACAAACCTAGCTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CAA 72 bp TTCTCTTTTCTCCGCACATCTGTGTCATTACCACGCTaGACAGGTTCTTTTCGATTCATGATCTCAGCCAAC +
Preference number: 6 (lower is better)
Translates to: FSFLRTSVSLPR*TGSFRFMISAN
Trigger: GTTGGCTGAGATCATGAATCGAAAAGAACCTGTCAAGCGTGGTAATGACACAGATGTGCGGAGAAAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CCA 72 bp TGTTGTCAGGCTTCACATCTCTGTGTATTAAACCCATaGAGTGTATTGCATCCAGAGCAAGAACAACTTCAG +
Preference number: 6 (lower is better)
Translates to: CCQASHLCVLNP*SVLHPEQEQLQ
Trigger: CTGAAGTTGTTCTTGCTCTGGATGCAATACACTCCATGGGTTTAATACACAGAGATGTGAAGCCTGACAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261535.7
ENST00000315872.11
ENST00000616279.4
CDS CCA 72 bp TTACTGTCCAATGTCATCTGCAGTTCAATTCGAATCTaGCTCTCTTCAGCTATTTGTGCCTGCATTTCATTC +
Preference number: 6 (lower is better)
Translates to: LLSNVICSSIRI*LSSAICACISF
Trigger: GAATGAAATGCAGGCACAAATAGCTGAAGAGAGCCAGATTCGAATTGAACTGCAGATGACATTGGACAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CAA 72 bp GAAGCAATTGTAGCATCTTTTTCCGTAAGTTCCTGTTaGTGTCTAGCCATCATCTCTTTGATCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: EAIVASFSVSSC*CLAIISLISSS
Trigger: AGAGCTGGAGATCAAAGAGATGATGGCTAGACACAAACAGGAACTTACGGAAAAAGATGCTACAATTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CAA 72 bp TTCTATCCCGTTCCCCATATTCTTCTTCTCTACACCTaGCTCTCCTTAACCACCCTTATCTTCCCTAAAAAT +
Preference number: 6 (lower is better)
Translates to: FYPVPHILLLYT*LSLTTLIFPKN
Trigger: ATTTTTAGGGAAGATAAGGGTGGTTAAGGAGAGCAAGGTGTAGAGAAGAAGAATATGGGGAACGGGATAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401753.5
CDS CAA 90 bp TCCTCAAGAGAAGCAATTGTAGCATCTTTTTCCGTAAGTTCCTGTTaGTGTCTAGCCATCATCTCTTTGATCTCCAGCTCTTTCATGATC +
Preference number: 6 (lower is better)
Translates to: SSREAIVASFSVSSC*CLAIISLISSSFMI
Trigger: GATCATGAAAGAGCTGGAGATCAAAGAGATGATGGCTAGACACAAACAGGAACTTACGGAAAAAGATGCTACAATTGCTTCTCTTGAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CAA 90 bp GGTACCATATTCTATCCCGTTCCCCATATTCTTCTTCTCTACACCTaGCTCTCCTTAACCACCCTTATCTTCCCTAAAAATATGTGGTAT +
Preference number: 6 (lower is better)
Translates to: GTIFYPVPHILLLYT*LSLTTLIFPKNMWY
Trigger: ATACCACATATTTTTAGGGAAGATAAGGGTGGTTAAGGAGAGCAAGGTGTAGAGAAGAAGAATATGGGGAACGGGATAGAATATGGTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401753.5
CDS TCA 72 bp TTAGGTCACACAGAATACTGGAATTGCAACAGGTTATaGGGAAATGGCAGTTTCCTAATATTCTCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: LGHTEYWNCNRL*GNGSFLIFSAQ
Trigger: CTGAGCTGAGAATATTAGGAAACTGCCATTTCCTCATAACCTGTTGCAATTCCAGTATTCTGTGTGACCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462366.1
CDS CAA 72 bp ACTCATAGATCTTATTTTTATCTGCTAGTCGTGCCTTaGTGGCCTTATGTTCAGCTTCTTCTTGTTCTAGGC +
Preference number: 6 (lower is better)
Translates to: THRSYFYLLVVP*WPYVQLLLVLG
Trigger: GCCTAGAACAAGAAGAAGCTGAACATAAGGCCACAAAGGCACGACTAGCAGATAAAAATAAGATCTATGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS TCA 72 bp CAAGTCGTACCTCCCTATCTGTTAAGAAAGCACAGATaGGATTCTTTGCATGTTTGGAAATTTCTGCATCTT +
Preference number: 6 (lower is better)
Translates to: QVVPPYLLRKHR*DSLHVWKFLHL
Trigger: AAGATGCAGAAATTTCCAAACATGCAAAGAATCTCATCTGTGCTTTCTTAACAGATAGGGAGGTACGACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261535.7
ENST00000315872.11
ENST00000401753.5
ENST00000431087.1
ENST00000616279.4
CDS GCA 72 bp GTCTCTTCTCCAGTTCTACTTTCGCTAGTAAGATTTTaGCGTTCTTTAAATCTTCTTCTAGGCCACATATTC +
Preference number: 6 (lower is better)
Translates to: VSSPVLLSLVRF*RSLNLLLGHIF
Trigger: GAATATGTGGCCTAGAAGAAGATTTAAAGAACGGCAAAATCTTACTAGCGAAAGTAGAACTGGAGAAGAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS GCA 72 bp TTTCACTGGAAGAATACGATCACCTTGAATAATGACTaGTTTCATAGAAGGCAGTTAGCTAGGTTTGTTTGG +
Preference number: 6 (lower is better)
Translates to: FHWKNTITLNND*FHRRQLARFVW
Trigger: CCAAACAAACCTAGCTAACTGCCTTCTATGAAAGCAGTCATTATTCAAGGTGATCGTATTCTTCCAGTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CCA 72 bp CCATTTCTTTCATGGCTTCTGATTTGGCTTCTTCGATaGACTCATAGATCTTATTTTTATCTGCTAGTCGTG +
Preference number: 6 (lower is better)
Translates to: PFLSWLLIWLLR*THRSYFYLLVV
Trigger: CACGACTAGCAGATAAAAATAAGATCTATGAGTCCATCGAAGAAGCCAAATCAGAAGCCATGAAAGAAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS GCA 72 bp AGCACATCTTTCTGTTTAAGGAGCTCATTTATTTTCTaGTGTGACTGTTTGAGGTCACAGTCTAATAGAGAA +
Preference number: 6 (lower is better)
Translates to: STSFCLRSSFIF*CDCLRSQSNRE
Trigger: TTCTCTATTAGACTGTGACCTCAAACAGTCACAGCAGAAAATAAATGAGCTCCTTAAACAGAAAGATGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CCA 72 bp TCCCTTGTGGCAAATATAATTAGATTTTTCTCCAACTaGCTCCACTGGAAATTCTTGTTCCTTCTTACTTTC +
Preference number: 6 (lower is better)
Translates to: SLVANIIRFFSN*LHWKFLFLLTF
Trigger: GAAAGTAAGAAGGAACAAGAATTTCCAGTGGAGCCAGTTGGAGAAAAATCTAATTATATTTGCCACAAGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CAA 72 bp TGTTTCGTACAGGCAATGAAAGCCATCCTTCTAATCTaGATTCTACAAATAAGCACAACATGTGAGGCTAAA +
Preference number: 6 (lower is better)
Translates to: CFVQAMKAILLI*ILQISTTCEAK
Trigger: TTTAGCCTCACATGTTGTGCTTATTTGTAGAATCAAGATTAGAAGGATGGCTTTCATTGCCTGTACGAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460262.1
ENST00000493096.1
CDS CAA 90 bp GCAAATATAATTAGATTTTTCTCCAACTGGCTCCACTGGAAATTCTaGTTCCTTCTTACTTTCTCCTTCATTGGCATACAGAATCTGGAA +
Preference number: 6 (lower is better)
Translates to: ANIIRFFSNWLHWKF*FLLTFSFIGIQNLE
Trigger: TTCCAGATTCTGTATGCCAATGAAGGAGAAAGTAAGAAGGAACAAGAATTTCCAGTGGAGCCAGTTGGAGAAAAATCTAATTATATTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CCA 72 bp AGAGCTTCTTCTCCATTTCTTTCATGGCTTCTGATTTaGCTTCTTCGATGGACTCATAGATCTTATTTTTAT +
Preference number: 6 (lower is better)
Translates to: RASSPFLSWLLI*LLRWTHRSYFY
Trigger: ATAAAAATAAGATCTATGAGTCCATCGAAGAAGCCAAATCAGAAGCCATGAAAGAAATGGAGAAGAAGCTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315872.11
ENST00000401753.5
ENST00000616279.4
CDS CCA 72 bp GAATCTGTATACGTACTTCATTTTTCCTTGATTGTATaGAATCAGTTTCTCTACAAGATGGAGAGTCACTTA +
Preference number: 6 (lower is better)
Translates to: ESVYVLHFSLIV*NQFLYKMESHL
Trigger: TAAGTGACTCTCCATCTTGTAGAGAAACTGATTCCATACAATCAAGGAAAAATGAAGTACGTATACAGATTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616279.4