Pregenerated sensors for RNPC3 (Homo sapiens)
Ensembl gene IDs: ENSG00000185946Ensembl transcript IDs: ENST00000423855.7, ENST00000524631.5, ENST00000532117.1, ENST00000533099.5, ENST00000533834.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAATTAGTATTTAAGTTCCAGATCACTGCAATGTGCAGCCAAGACTaGGAACCACTGTTCTTGGTGATTACGGTCATCAACCAGTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: KLVFKFQITAMCSQD*EPLFLVITVINQSG Trigger: TCCAGACTGGTTGATGACCGTAATCACCAAGAACAGTGGTTCTCAGTCTTGGCTGCACATTGCAGTGATCTGGAACTTAAATACTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| 3UTR CCA 90 bp | AGACTGAGAACCACTGTTCTTGGTGATTACGGTCATCAACCAGTCTaGAAACCACTATTCCTATATACCTGCCAAGACTGTTTTTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: RLRTTVLGDYGHQPV*KPLFLYTCQDCFSL Trigger: TAAGGAAAAACAGTCTTGGCAGGTATATAGGAATAGTGGTTTCCAGACTGGTTGATGACCGTAATCACCAAGAACAGTGGTTCTCAGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| 3UTR TCA 72 bp | TTTAAGTTCCAGATCACTGCAATGTGCAGCCAAGACTaGGAACCACTGTTCTTGGTGATTACGGTCATCAAC | + |
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Preference number: 3 (lower is better) Translates to: FKFQITAMCSQD*EPLFLVITVIN Trigger: GTTGATGACCGTAATCACCAAGAACAGTGGTTCTCAGTCTTGGCTGCACATTGCAGTGATCTGGAACTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| 3UTR CCA 72 bp | ACCACTGTTCTTGGTGATTACGGTCATCAACCAGTCTaGAAACCACTATTCCTATATACCTGCCAAGACTGT | + |
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Preference number: 3 (lower is better) Translates to: TTVLGDYGHQPV*KPLFLYTCQDC Trigger: ACAGTCTTGGCAGGTATATAGGAATAGTGGTTTCCAGACTGGTTGATGACCGTAATCACCAAGAACAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| 3UTR TCA 72 bp | CCAAAAAGGATACGACAAGAAAGGATACACTTTGCATaGCAGTATTACAGCAGTATTTACGCAGGAATGCTT | + |
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Preference number: 3 (lower is better) Translates to: PKRIRQERIHFA*QYYSSIYAGML Trigger: AAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTTTTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| 3UTR TCA 72 bp | TCTGTGCTACACTCCCAACACCTTAAATCAAAATTCTaGCCAAAGGAACCAAGCATCAATATATTTCTTAAG | + |
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Preference number: 3 (lower is better) Translates to: SVLHSQHLKSKF*PKEPSINIFLK Trigger: CTTAAGAAATATATTGATGCTTGGTTCCTTTGGTCAGAATTTTGATTTAAGGTGTTGGGAGTGTAGCACAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | ACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAGCTCAGCCGGCAGGTaGCTGACCAGAAGGGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: TTRKDTLCMTVLQQYLRRSSAGR*LTRRVR Trigger: CCGAACCCTTCTGGTCAGGCACCTGCCGGCTGAGCT...CCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | ACTGTTCTTGGTGATTACGGTCATCAACCAGTCTGGAAACCACTATTCCTATATCGGCTGCTCGGGAGCTaGCATTTTCCTTCTCGCGAG | + |
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Preference number: 4 (lower is better) Translates to: TVLGDYGHQPVWKPLFLYRLLGS*HFPSRE Trigger: CTCGCGAGAAGGAAAATGGCAGCTCCCGAGCAGCCG...ATATAGGAATAGTGGTTTCCAGACTGGTTGATGACCGTAATCACCAAGAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | AAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCGCTCGTGCATCCCCTTaGTATCGCAAGCGGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KGYTLHDSITAVFTQECFARASP*YRKRLL Trigger: GAGCAGCCGCTTGCGATATCAAGGGGATGCACGAGC...GAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | TACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGCAGTCGCCCCTTATCTaGCAGGACCCGCACAGACTG | + |
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Preference number: 4 (lower is better) Translates to: YDKKGYTLHDSITAVFTQQSPLI*QDPHRL Trigger: CAGTCTGTGCGGGTCCTGTCAGATAAGGGGCGACTG...CTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | GGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTCAGTCGCCCCTTATCTaGCAGGACCCGCACAGACTG | + |
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Preference number: 4 (lower is better) Translates to: GYTLHDSITAVFTQECFFQSPLI*QDPHRL Trigger: CAGTCTGTGCGGGTCCTGTCAGATAAGGGGCGACTG...AAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | GATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTAAGGACCCGCACAGACTaGGCCCCGAAGTACTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTLCMTVLQQYLRRNASLRTRTD*APKYFS Trigger: GCTGAAGTACTTCGGGGCTCAGTCTGTGCGGGTCCT...TAAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | GACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAACCTTCTCGCGAGAACTaGGCCACCGAAAAGCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: DKKGYTLHDSITAVFTQEPSREN*ATEKRQ Trigger: TTGCCGCTTTTCGGTGGCGCAGTTCTCGCGAGAAGG...TTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | AGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTCCTTCTCGCGAGAACTaGGCCACCGAAAAGCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: RKDTLCMTVLQQYLRRNAPSREN*ATEKRQ Trigger: TTGCCGCTTTTCGGTGGCGCAGTTCTCGCGAGAAGG...AGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTAGCTCAGCCGGCAGGTaGCTGACCAGAAGGGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: KGYDKKGYTLHDSITAVFSSAGR*LTRRVR Trigger: CCGAACCCTTCTGGTCAGGCACCTGCCGGCTGAGCT...AAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | GTTCTTGGTGATTACGGTCATCAACCAGTCTGGAAACCACTATTCCTATATACCTCAGGGAAAGAAGGTTaGCGCTCAAGGACAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: VLGDYGHQPVWKPLFLYTSGKEG*RSRTRG Trigger: TCCTCTTGTCCTTGAGCGTCAACCTTCTTTCCCTGA...GGTATATAGGAATAGTGGTTTCCAGACTGGTTGATGACCGTAATCACCAAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | TACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTATTGCTCGTGCATCCCCTTaGTATCGCAAGCGGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: YTLHDSITAVFTQECFFIARASP*YRKRLL Trigger: GAGCAGCCGCTTGCGATATCAAGGGGATGCACGAGC...AATAAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | AAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTAGCATCCCAAGTAGCTaGGACCAGAGGTGCAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KDTLCMTVLQQYLRRNASSIPSS*DQRCKP Trigger: TGGCTTGCACCTCTGGTCTCAGCTACTTGGGATGCT...AGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | GGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTGATATCGCAAGCGGCTaGTCGGGAGCTGCCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: GYTLHDSITAVFTQECFFDIASG*SGAAIF Trigger: GAAAATGGCAGCTCCCGAGCAGCCGCTTGCGATATC...AAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCGATATCGCAAGCGGCTaGTCGGGAGCTGCCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: KGYTLHDSITAVFTQECFDIASG*SGAAIF Trigger: GAAAATGGCAGCTCCCGAGCAGCCGCTTGCGATATC...GAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | ACTGTTCTTGGTGATTACGGTCATCAACCAGTCTGGAAACCACTATTCCTATATAGGGTCTCCCTACATTaGCCAGGCTGGTCTCAAACT | + |
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Preference number: 4 (lower is better) Translates to: TVLGDYGHQPVWKPLFLYRVSLH*PGWSQT Trigger: AGTTTGAGACCAGCCTGGGCAATGTAGGGAGACCCT...ATATAGGAATAGTGGTTTCCAGACTGGTTGATGACCGTAATCACCAAGAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | ACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTATTACGGCTGCTCGGGAGCTaGCATTTTCCTTGGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: TLCMTVLQQYLRRNASLLRLLGS*HFPWRS Trigger: GCTTCTCCAAGGAAAATGGCAGCTCCCGAGCAGCCG...TAATAAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524631.5 |
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| CDS-3UTR GCA 90 bp | CTGCCAAGACTGTTTTTCCTTAATGCACTACCCTTAGTGGGCATTATGTGTTCTCTCGGACTTGCAAAGTaGTGGGATTACAGGTATGAG | + |
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Preference number: 4 (lower is better) Translates to: LPRLFFLNALPLVGIMCSLGLAK*WDYRYE Trigger: CTCATACCTGTAATCCCAGCACTTTGCAAGTCCGAG...AGAACACATAATGCCCACTAAGGGTAGTGCATTAAGGAAAAACAGTCTTGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | GGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTGTGATCATGGTTCACTaGAACCTCAACCTCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GYTLHDSITAVFTQECFFVIMVH*NLNLWG Trigger: GCCCCAGAGGTTGAGGTTGCAGTGAACCATGATCAC...AAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR CCA 90 bp | TGCCCCAAAAAGGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGTGCAACCTCAACCTCTaGGGCTCAAGTAATCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CPKKDTTRKDTLCMTVLQCNLNL*GSSNPP Trigger: AGGAGGATTACTTGAGCCCCAGAGGTTGAGGTTGCA...CTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTTTTTGGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR CCA 90 bp | GTTCTTGGTGATTACGGTCATCAACCAGTCTGGAAACCACTATTCCTATATACCCAGGCTAGAATGCAGTaGTGTGATCATGGTTCACTG | + |
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Preference number: 4 (lower is better) Translates to: VLGDYGHQPVWKPLFLYTQARMQ*CDHGSL Trigger: CAGTGAACCATGATCACACCACTGCATTCTAGCCTG...GGTATATAGGAATAGTGGTTTCCAGACTGGTTGATGACCGTAATCACCAAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | GGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTGCAGATCGAGCAAACTaGACCACCATGGGTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GYTLHDSITAVFTQECFFADRAN*TTMGFP Trigger: TGGAAAACCCATGGTGGTTCAGTTTGCTCGATCTGC...AAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR CCA 90 bp | ACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGCTTACAAGCAAAAATTaGCCCAGAGATGTGCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TTRKDTLCMTVLQQYLRRLTSKN*PRDVRG Trigger: CCCTCGCACATCTCTGGGCCAATTTTTGCTTGTAAG...CCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | ACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATTCAGGGAAAGAAGGTTaGCGCTCAAGGACAAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: TRKDTLCMTVLQQYLRRNSGKEG*RSRTRG Trigger: TCCTCTTGTCCTTGAGCGTCAACCTTCTTTCCCTGA...ATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| 3UTR CAA 72 bp | CTGCCCCAAAAAGGATACGACAAGAAAGGATACACTTaGCATGACAGTATTACAGCAGTATTTACGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LPQKGYDKKGYT*HDSITAVFTQE Trigger: TTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTTTTTGGGGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | CTGCCAAGACTGTTTTTCCTTAATGCACTACCCTTAGTGGGCATTATGTGTTCTAACGTATATCAAACATaGTCCGCTGTGTTTCTGATG | + |
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Preference number: 4 (lower is better) Translates to: LPRLFFLNALPLVGIMCSNVYQT*SAVFLM Trigger: CATCAGAAACACAGCGGATCATGTTTGATATACGTT...AGAACACATAATGCCCACTAAGGGTAGTGCATTAAGGAAAAACAGTCTTGGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | AAAGGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTGCAGATCGAGCAAACTaGACCACCATGGGTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: KGYDKKGYTLHDSITAVFADRAN*TTMGFP Trigger: TGGAAAACCCATGGTGGTTCAGTTTGCTCGATCTGC...AAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | GGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTAACCACTGTTCTTGGTaGTTACGGTCATCAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: GYTLHDSITAVFTQECFFNHCSW*LRSSTS Trigger: ACTGGTTGATGACCGTAATCACCAAGAACAGTGGTT...AAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | AAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTGCACTGGATGTAAACTaGTGTGTGAAGGACACAAAG | + |
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Preference number: 4 (lower is better) Translates to: KDTLCMTVLQQYLRRNASALDVN*CVKDTK Trigger: CTTTGTGTCCTTCACACAGCAGTTTACATCCAGTGC...AGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | AAGGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACTCCCATCTCGGACTTaGAAAGTGCTGGGATTACAG | + |
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Preference number: 4 (lower is better) Translates to: KDTTRKDTLCMTVLQQYLLPSRT*KVLGLQ Trigger: CTGTAATCCCAGCACTTTGCAAGTCCGAGATGGGAG...TAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | GATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTATCACCCAGGCTAGAATaGAGTGGTGTGATCATGGTT | + |
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Preference number: 4 (lower is better) Translates to: DTLCMTVLQQYLRRNASLSPRLE*SGVIMV Trigger: AACCATGATCACACCACTGCATTCTAGCCTGGGTGA...TAAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR CCA 90 bp | TACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGAAGTATTCCTTAACCTaGATCAACAGGTGGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: YDKKGYTLHDSITAVFTQKYSLT*INRWGK Trigger: CTTCCCCCACCTGTTGATCCAGGTTAAGGAATACTT...CTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | ACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAACGTATATCAAACATaGTCCGCTGTGTTTCTGATG | + |
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Preference number: 4 (lower is better) Translates to: TTRKDTLCMTVLQQYLRRNVYQT*SAVFLM Trigger: CATCAGAAACACAGCGGATCATGTTTGATATACGTT...CCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | TGCCCCAAAAAGGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCTAAGTAAGTTGACCTaGTTCACTAACTTTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: CPKKDTTRKDTLCMTVLQLSKLT*FTNFPS Trigger: TGAGGGAAAGTTAGTGAATCAGGTCAACTTACTTAG...CTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTTTTTGGGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR CCA 90 bp | ACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTATTACTTACAAGCAAAAATTaGCCCAGAGATGTGCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TLCMTVLQQYLRRNASLLLTSKN*PRDVRG Trigger: CCCTCGCACATCTCTGGGCCAATTTTTGCTTGTAAG...TAATAAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | ACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGCTTAAATCAAAATTCTaGCCAAAGGAACCAAGCATC | + |
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Preference number: 4 (lower is better) Translates to: TTRKDTLCMTVLQQYLRRLKSKF*PKEPSI Trigger: GATGCTTGGTTCCTTTGGTCAGAATTTTGATTTAAG...CCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | ACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAAATCCTATATTGGATaGATCAACTTCAGTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TTRKDTLCMTVLQQYLRRKSYIG*INFSSR Trigger: CCTGCTACTGAAGTTGATGCATCCAATATAGGATTT...CCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | ACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGACAGGTATGAGCCACTaGACCCTTTTAAAATTAGTA | + |
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Preference number: 4 (lower is better) Translates to: TTRKDTLCMTVLQQYLRRTGMSH*TLLKLV Trigger: TACTAATTTTAAAAGGGTGCAGTGGCTCATACCTGT...CCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR CCA 90 bp | AAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCAAAACTCTTCCTTGGTaGTTCTCGACCTTGTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: KKGYTLHDSITAVFTQECKTLPW*FSTLFV Trigger: TACAAACAAGGTCGAGAACCACCAAGGAAGAGTTTT...GCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | AGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTAGGATACACTTTGCATaGCAGTATTACAGCAGTATT | + |
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Preference number: 4 (lower is better) Translates to: RKDTLCMTVLQQYLRRNARIHFA*QYYSSI Trigger: AATACTGCTGTAATACTGTCATGCAAAGTGTATCCT...AGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524631.5 ENST00000532117.1 ENST00000533099.5 |
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| CDS-3UTR TCA 90 bp | AGAGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGAGGATACACTTTGCATaGCAGTATTACAGCAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RDKKGYTLHDSITAVFTQRIHFA*QYYSSI Trigger: AATACTGCTGTAATACTGTCATGCAAAGTGTATCCT...CTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532117.1 |
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| CDS-3UTR TCA 90 bp | GGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTAGGATACACTTTGCATaGCAGTATTACAGCAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: GYTLHDSITAVFTQECFFRIHFA*QYYSSI Trigger: AATACTGCTGTAATACTGTCATGCAAAGTGTATCCT...AAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524631.5 ENST00000532117.1 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | TACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGATGGAGTCTTGTCAATaGCTTTATAGCTGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YDKKGYTLHDSITAVFTQMESCQ*LYSCFF Trigger: GAAAAAGCAGCTATAAAGGCATTGACAAGACTCCAT...CTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | TACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGAAATCCTATATTGGATaGATCAACTTCAGTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YDKKGYTLHDSITAVFTQKSYIG*INFSSR Trigger: CCTGCTACTGAAGTTGATGCATCCAATATAGGATTT...CTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | GACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAAAGAAAGGATACACTTTaGATGACAGTATTACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DKKGYTLHDSITAVFTQERKDTL*MTVLQQ Trigger: CTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCT...TTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524631.5 ENST00000532117.1 ENST00000533099.5 |
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| CDS-3UTR CCA 90 bp | GGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGAAGAGGTGCATGCAATaGCATATAGTCTTCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: GYDKKGYTLHDSITAVFTKRCMQ*HIVFIH Trigger: ATGTATGAAGACTATATGCCATTGCATGCACCTCTT...CGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | AAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTCTATTCCTATATACCTaGCAAGACTGTTTTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KDTLCMTVLQQYLRRNASLFLYT*QDCFSL Trigger: TAAGGAAAAACAGTCTTGGCAGGTATATAGGAATAG...AGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | GACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAAGTACAGGAATCTTTATaGATAAAAACTCTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DKKGYTLHDSITAVFTQEVQESL*IKTLPW Trigger: CCAAGGAAGAGTTTTTATGCATAAAGATTCCTGTAC...TTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR CCA 90 bp | GATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTACAAAAACAGAAATCGTaGGAAGAAGTCTCAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DTLCMTVLQQYLRRNASLQKQKS*EEVSVK Trigger: TTTGACTGAGACTTCTTCCCACGATTTCTGTTTTTG...TAAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000524631.5 |
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| CDS-3UTR CCA 90 bp | TACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTATTGGTCATCAACCAGTCTaGAAACCACTATTCCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: YTLHDSITAVFTQECFFIGHQPV*KPLFLY Trigger: ATATAGGAATAGTGGTTTCCAGACTGGTTGATGACC...AATAAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR CCA 90 bp | GGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTAAGCAGTGTCTAAACTaGTCAGTCCTTAAAATTACT | + |
|
Preference number: 4 (lower is better) Translates to: GYTLHDSITAVFTQECFFKQCLN*SVLKIT Trigger: AGTAATTTTAAGGACTGACCAGTTTAGACACTGCTT...AAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTATGGAGTCTTGTCAATaGCTTTATAGCTGCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGYDKKGYTLHDSITAVFMESCQ*LYSCFF Trigger: GAAAAAGCAGCTATAAAGGCATTGACAAGACTCCAT...AAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | AAGGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTAAGAAAGGATACACTTTaGATGACAGTATTACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDTTRKDTLCMTVLQQYLRKDTL*MTVLQQ Trigger: CTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCT...TAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR GCA 90 bp | AAAGGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTAGAAAGGATACACTTTaGATGACAGTATTACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGYDKKGYTLHDSITAVFRKDTL*MTVLQQ Trigger: CTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCT...AAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR CCA 90 bp | ACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTATTAAAGAGGTGCATGCAATaGCATATAGTCTTCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: TLCMTVLQQYLRRNASLLKRCMQ*HIVFIH Trigger: ATGTATGAAGACTATATGCCATTGCATGCACCTCTT...TAATAAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS GCA 90 bp | GAAACCAGGAAATACCGAGAAAGAAAGTCACCTTCTCGCGAGAACTaGGCCACCGAAAAGCGGCAACCCTTCGAAGACTCTTCGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ETRKYRERKSPSREN*ATEKRQPFEDSSGK Trigger: CTTCCCCGAAGAGTCTTCGAAGGGTTGCCGCTTTTCGGTGGCGCAGTTCTCGCGAGAAGGTGACTTTCTTTCTCGGTATTTCCTGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423855.7 ENST00000524631.5 |
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| CDS CCA 90 bp | AAGGAAGGTGAAAGTTCGCCAGCTTCTGCATACCAGCAGAAGCTATaGGAGAGGCACAGAACAGATCCTTCACTCAAAGCCCTCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: KEGESSPASAYQQKL*ERHRTDPSLKALRM Trigger: CATTCTGAGGGCTTTGAGTGAAGGATCTGTTCTGTGCCTCTCCCATAGCTTCTGCTGGTATGCAGAAGCTGGCGAACTTTCACCTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS TCA 90 bp | TACAAAGGCAGAAATTGTGGTGATGCTTCCACAAGCCAAGGAAGGTaGAAGTTCGCCAGCTTCTGCATACCAGCAGAAGCTATGGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YKGRNCGDASTSQGR*KFASFCIPAEAMGE Trigger: CTCTCCCATAGCTTCTGCTGGTATGCAGAAGCTGGCGAACTTTCACCTTCCTTGGCTTGTGGAAGCATCACCACAATTTCTGCCTTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS TCA 90 bp | TCCTTCACTCAAAGCCCTCAGAATGAACCAATCCTGCCACACTTTTaGCTTCAGTTTGCCTCCAGAACTGTGAGACAACACATCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SFTQSPQNEPILPHF*LQFASRTVRQHISV Trigger: AACAGAGATGTGTTGTCTCACAGTTCTGGAGGCAAACTGAAGTCAAAAGTGTGGCAGGATTGGTTCATTCTGAGGGCTTTGAGTGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS TCA 90 bp | ATACTCACAAAGGGAGTATGCTATGTACAAAGGCAGAAATTGTGGTaGTGCTTCCACAAGCCAAGGAAGGTGAAAGTTCGCCAGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILTKGVCYVQRQKLW*CFHKPRKVKVRQLL Trigger: CAGAAGCTGGCGAACTTTCACCTTCCTTGGCTTGTGGAAGCATCACCACAATTTCTGCCTTTGTACATAGCATACTCCCTTTGTGAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS-3UTR CAA 90 bp | AGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTTCAGGGAAAGAAGGTaGACGCTCAAGGACAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKDTLCMTVLQQYLRRNAFRERR*TLKDKR Trigger: CCTCTTGTCCTTGAGCGTCAACCTTCTTTCCCTGAA...AGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR CAA 90 bp | AAAAAGGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATTTCAGGGAAAGAAGGTaGACGCTCAAGGACAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KKDTTRKDTLCMTVLQQYFRERR*TLKDKR Trigger: CCTCTTGTCCTTGAGCGTCAACCTTCTTTCCCTGAA...ATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR CAA 90 bp | AAAAAGGATACGACAAGAAAGGATACACTTTGCATGACAGTATTACAGCAGTATACTTACAAGCAAAAATaGGCCCAGAGATGTGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KKDTTRKDTLCMTVLQQYTYKQK*AQRCAR Trigger: CCTCGCACATCTCTGGGCCAATTTTTGCTTGTAAGT...ATACTGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTTGTCGTATCCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR CAA 90 bp | TACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTATTACTTACAAGCAAAAATaGGCCCAGAGATGTGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YTLHDSITAVFTQECFFITYKQK*AQRCAR Trigger: CCTCGCACATCTCTGGGCCAATTTTTGCTTGTAAGT...AATAAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000524631.5 ENST00000533099.5 |
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| CDS-3UTR CAA 90 bp | GATACACTTTGCATGACAGTATTACAGCAGTATTTACGCAGGAATGCTTCTTTAAAGAAAGGATACACTTaGCATGACAGTATTACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DTLCMTVLQQYLRRNASLKKGYT*HDSITA Trigger: TGCTGTAATACTGTCATGCAAAGTGTATCCTTTCTT...TAAAGAAGCATTCCTGCGTAAATACTGCTGTAATACTGTCATGCAAAGTGTATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000524631.5 ENST00000532117.1 ENST00000533099.5 |
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| CDS GCA 72 bp | AAATACCGAGAAAGAAAGTCACCTTCTCGCGAGAACTaGGCCACCGAAAAGCGGCAACCCTTCGAAGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: KYRERKSPSREN*ATEKRQPFEDS Trigger: AGAGTCTTCGAAGGGTTGCCGCTTTTCGGTGGCGCAGTTCTCGCGAGAAGGTGACTTTCTTTCTCGGTATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423855.7 ENST00000524631.5 |
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| CDS CCA 72 bp | GAAAGTTCGCCAGCTTCTGCATACCAGCAGAAGCTATaGGAGAGGCACAGAACAGATCCTTCACTCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ESSPASAYQQKL*ERHRTDPSLKA Trigger: GGCTTTGAGTGAAGGATCTGTTCTGTGCCTCTCCCATAGCTTCTGCTGGTATGCAGAAGCTGGCGAACTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS TCA 72 bp | AGAAATTGTGGTGATGCTTCCACAAGCCAAGGAAGGTaGAAGTTCGCCAGCTTCTGCATACCAGCAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RNCGDASTSQGR*KFASFCIPAEA Trigger: AGCTTCTGCTGGTATGCAGAAGCTGGCGAACTTTCACCTTCCTTGGCTTGTGGAAGCATCACCACAATTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS CCA 72 bp | TTCCAGGGGTCTCCGGAAAGACTTACAAGCAAAAATTaGCCCAGAGATGTGCGAGGGTTAACACAAGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: FQGSPERLTSKN*PRDVRGLTQVV Trigger: GACAACTTGTGTTAACCCTCGCACATCTCTGGGCCAATTTTTGCTTGTAAGTCTTTCCGGAGACCCCTGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000423855.7 ENST00000524631.5 ENST00000533099.5 |
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| CDS TCA 72 bp | CAAAGCCCTCAGAATGAACCAATCCTGCCACACTTTTaGCTTCAGTTTGCCTCCAGAACTGTGAGACAACAC | + |
|
Preference number: 6 (lower is better) Translates to: QSPQNEPILPHF*LQFASRTVRQH Trigger: GTGTTGTCTCACAGTTCTGGAGGCAAACTGAAGTCAAAAGTGTGGCAGGATTGGTTCATTCTGAGGGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS TCA 72 bp | GGCACAGAACAGATCCTTCACTCAAAGCCCTCAGAATaGACCAATCCTGCCACACTTTTGACTTCAGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GTEQILHSKPSE*TNPATLLTSVC Trigger: GCAAACTGAAGTCAAAAGTGTGGCAGGATTGGTTCATTCTGAGGGCTTTGAGTGAAGGATCTGTTCTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS GCA 72 bp | GATCCTTCACTCAAAGCCCTCAGAATGAACCAATCCTaGCACACTTTTGACTTCAGTTTGCCTCCAGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: DPSLKALRMNQS*HTFDFSLPPEL Trigger: CAGTTCTGGAGGCAAACTGAAGTCAAAAGTGTGGCAGGATTGGTTCATTCTGAGGGCTTTGAGTGAAGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS CAA 72 bp | ATTCCAGGGGTCTCCGGAAAGACTTACAAGCAAAAATaGGCCCAGAGATGTGCGAGGGTTAACACAAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: IPGVSGKTYKQK*AQRCARVNTSC Trigger: ACAACTTGTGTTAACCCTCGCACATCTCTGGGCCAATTTTTGCTTGTAAGTCTTTCCGGAGACCCCTGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000423855.7 ENST00000524631.5 ENST00000533099.5 |
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| CDS TCA 72 bp | TGCCACACTTTTGACTTCAGTTTGCCTCCAGAACTGTaGGACAACACATCTCTGTTGTTTCAGCCACTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: CHTFDFSLPPEL*DNTSLLFQPLS Trigger: GCTAAGTGGCTGAAACAACAGAGATGTGTTGTCTCACAGTTCTGGAGGCAAACTGAAGTCAAAAGTGTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS TCA 72 bp | AAGGGAGTATGCTATGTACAAAGGCAGAAATTGTGGTaGTGCTTCCACAAGCCAAGGAAGGTGAAAGTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: KGVCYVQRQKLW*CFHKPRKVKVR Trigger: GCGAACTTTCACCTTCCTTGGCTTGTGGAAGCATCACCACAATTTCTGCCTTTGTACATAGCATACTCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS TCA 72 bp | AGCTGTGGTCTCTGGATAAGATGCCTCATCATTACCTaGAACCTCATTAATCTCGCAAATTTTCAGGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SCGLWIRCLIIT*NLINLANFQVP Trigger: TGGCACCTGAAAATTTGCGAGATTAATGAGGTTTCAGGTAATGATGAGGCATCTTATCCAGAGACCACAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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| CDS CAA 90 bp | GTATGTATCTCAGACACAGTATTTGTGACAGTCTATCAGCTGCATTaGGAAAATATAACTCCAGACTTGTGGGACACACTGACTTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: VCISDTVFVTVYQLH*ENITPDLWDTLTYF Trigger: AAAATAAGTCAGTGTGTCCCACAAGTCTGGAGTTATATTTTCCAAATGCAGCTGATAGACTGTCACAAATACTGTGTCTGAGATACATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533834.1 |
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