RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF220 (Homo sapiens)

Ensembl gene IDs: ENSG00000187147

Ensembl transcript IDs: ENST00000335497.11, ENST00000355387.6, ENST00000361799.7, ENST00000372247.6, ENST00000440132.2, ENST00000453863.5, ENST00000470498.1, ENST00000471494.5, ENST00000474064.5, ENST00000474394.5, ENST00000474956.1, ENST00000475378.5, ENST00000480686.5, ENST00000484745.5, ENST00000487332.1, ENST00000488865.2, ENST00000496262.1, ENST00000497469.5

Found 636 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGGAGCCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATaGCCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGCAGATGGATA +
Preference number: 1 (lower is better)
Translates to: KEPHQQQSPRGGTDG*PATSLGLLASSRWI
Trigger: TATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGTGGGGCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR CCA 90 bp GCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTaGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCG +
Preference number: 1 (lower is better)
Translates to: ASASWLPADGYPAEA*HQSANVYVSAACTS
Trigger: CGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR GCA 90 bp CCTTCCCTCTTAGAAAGGCAATGCTCCACATGCCTACTCATCTCCTaGTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGC +
Preference number: 1 (lower is better)
Translates to: PSLLERQCSTCLLIS*SDPARGRLHRGHTC
Trigger: GCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGAGGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR CCA 90 bp CGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTGGTaGCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGC +
Preference number: 1 (lower is better)
Translates to: RVSCLYLGSHLPGEW*PVSASVHTTHTPQS
Trigger: GCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR TCA 90 bp CCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATATACACCACTaGACACCGAGCACATGGGAGAGGGAAGGGACACCACAGGAGAGA +
Preference number: 1 (lower is better)
Translates to: PWGVCPMSGRRNIHH*TPSTWEREGTPQER
Trigger: TCTCTCCTGTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR GCA 90 bp TTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTaGCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTT +
Preference number: 1 (lower is better)
Translates to: LASSRWIPSRGLAPE*QCLRVSCLYLGSHL
Trigger: AAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR CCA 90 bp CTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTaGTGGCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAA +
Preference number: 1 (lower is better)
Translates to: LRVSCLYLGSHLPGE*WPVSASVHTTHTPQ
Trigger: TTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR GCA 90 bp CCATTTATACACAACATTGTAAACATACACGGTCTATATTACATGTaGTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTA +
Preference number: 1 (lower is better)
Translates to: PFIHNIVNIHGLYYM*FSLVFACLSVRLSV
Trigger: TACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTGTGTATAAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCAACCCCCACCTCCCTaGCCCACCCTGGGAACAGAG +
Preference number: 2 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAQPPPP*PTLGTE
Trigger: CTCTGTTCCCAGGGTGGGGCAGGGAGGTGGGGGTTG...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCCTCCCTGCCCCACCCTaGGAACAGAGCTGGAACAGG +
Preference number: 2 (lower is better)
Translates to: TPQERERQVPQEVDGPSSLPAPP*EQSWNR
Trigger: CCTGTTCCAGCTCTGTTCCCAGGGTGGGGCAGGGAG...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGGTCCCTTGGGGCGTGTaGCCCATGTCTGGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKVPWGV*PMSGRR
Trigger: TCTTCTCCCAGACATGGGGCACACGCCCCAAGGGAC...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp CCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGCCATGCCTACTCATCTCCTaGTCCGATCCTGCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: PLGFQQMDTQQRPGTRVPCLLIS*SDPARG
Trigger: CCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCA...TGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR-3UTR CCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCCTGGGAACAGAGCTaGAACAGGTATGGCCCCCAA +
Preference number: 2 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAPWEQS*NRYGPQ
Trigger: TTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAGGG...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCCAACCCCCACCTCCCTaGCCCACCCTGGGAACAGAG +
Preference number: 2 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVQPPPP*PTLGTE
Trigger: CTCTGTTCCCAGGGTGGGGCAGGGAGGTGGGGGTTG...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp TATGCAGGTGCTAACGCGGCTTGGCTGTCACCTTCAATGCATCACCCGAAGCTGCTCCTGCTCCGATCCTaGCAGGGGGCGGTTGCACAG +
Preference number: 2 (lower is better)
Translates to: YAGANAAWLSPSMHHPKLLLLRS*QGAVAQ
Trigger: CTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAG...CAGCTTCGGGTGATGCATTGAAGGTGACAGCCAAGCCGCGTTAGCACCTGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR-3UTR TCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTGCTCCCAGCCAACCCTaGAGGAGGCGCTGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGAPSQP*RRRCFQ
Trigger: CTGGAAGCAGCGCCTCCTTCAGGGTTGGCTGGGAGC...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR TCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGGCTCCCAGCCAACCCTaGAGGAGGCGCTGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQAPSQP*RRRCFQ
Trigger: CTGGAAGCAGCGCCTCCTTCAGGGTTGGCTGGGAGC...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR TCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGAGAAATATACACCACTaGACACCGAGCACATGGGAG +
Preference number: 2 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKRNIHH*TPSTWE
Trigger: CTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCT...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGCAACCCCCACCTCCCTaGCCCACCCTGGGAACAGAG +
Preference number: 2 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKQPPPP*PTLGTE
Trigger: CTCTGTTCCCAGGGTGGGGCAGGGAGGTGGGGGTTG...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCTTCAGTCTGGTGTTTaGATGTCTGTCTGTCCGTCT +
Preference number: 2 (lower is better)
Translates to: GHHRRERGRYPKRWMGRALQSGV*MSVCPS
Trigger: AGACGGACAGACAGACATGCAAACACCAGACTGAAG...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCCTTCAGTCTGGTGTTTaGATGTCTGTCTGTCCGTCT +
Preference number: 2 (lower is better)
Translates to: TPQERERQVPQEVDGPSSLQSGV*MSVCPS
Trigger: AGACGGACAGACAGACATGCAAACACCAGACTGAAG...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGCCACAGCCTCTACTCTaGCTCCAGAGTCCTGCGTGT +
Preference number: 2 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWPQPLL*LQSPAC
Trigger: ACACGCAGGACTCTGGAGCCAGAGTAGAGGCTGTGG...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATACCAGCAGGTAGTGCCTaGGCCACAGCCTCTACTCTG +
Preference number: 2 (lower is better)
Translates to: KERIMSLGACAPCLGEEIPAGSA*ATASTL
Trigger: CAGAGTAGAGGCTGTGGCCCAGGCACTACCTGCTGG...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGCTCCCTGCCCCACCCTaGGAACAGAGCTGGAACAGG +
Preference number: 2 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGLPAPP*EQSWNR
Trigger: CCTGTTCCAGCTCTGTTCCCAGGGTGGGGCAGGGAG...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTACCAGCAGGTAGTGCCTaGGCCACAGCCTCTACTCTG +
Preference number: 2 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVPAGSA*ATASTL
Trigger: CAGAGTAGAGGCTGTGGCCCAGGCACTACCTGCTGG...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCCCCCCAAACCATAGGTaGGAGCCAGCAGGTAGTGCC +
Preference number: 2 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGPPNHR*EPAGSA
Trigger: GGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGG...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGCCCCCAAACCATAGGTaGGAGCCAGCAGGTAGTGCC +
Preference number: 2 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGPPNHR*EPAGSA
Trigger: GGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGG...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATACCCTGGGAACAGAGCTaGAACAGGTATGGCCCCCAA +
Preference number: 2 (lower is better)
Translates to: KERIMSLGACAPCLGEEIPWEQS*NRYGPQ
Trigger: TTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAGGG...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCTCCCTGCCCCACCCTaGGAACAGAGCTGGAACAGG +
Preference number: 2 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQLPAPP*EQSWNR
Trigger: CCTGTTCCAGCTCTGTTCCCAGGGTGGGGCAGGGAG...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCGTCCGTCTGTCAGTATaGGGGCTGGATCTTAGGAGC +
Preference number: 2 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVVRLSV*GLDLRS
Trigger: GCTCCTAAGATCCAGCCCCCATACTGACAGACGGAC...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGACATGTGCTTCAGTCTaGTGTTTGCATGTCTGTCTG +
Preference number: 2 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKTCASV*CLHVCL
Trigger: CAGACAGACATGCAAACACCAGACTGAAGCACATGT...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp GCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGCGGTTGTTGTTCTCATaGTCGATGTCCACAGCATCA +
Preference number: 2 (lower is better)
Translates to: AEAWHQSANVYVSAACTSRLLFS*SMSTAS
Trigger: TGATGCTGTGGACATCGAGCATGAGAACAACAACCG...CGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR-3UTR CCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGCCCCCAAACCATAGGTaGGAGCCAGCAGGTAGTGCC +
Preference number: 2 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKPPNHR*EPAGSA
Trigger: GGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGG...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR CAA 90 bp GCCCGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTaGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCATG +
Preference number: 2 (lower is better)
Translates to: ARIRFCPHHSYSSKR*LFSCSMSTASSSAM
Trigger: CATGGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR-3UTR CCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGACCACAGCCTCTACTCTaGCTCCAGAGTCCTGCGTGT +
Preference number: 2 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGPQPLL*LQSPAC
Trigger: ACACGCAGGACTCTGGAGCCAGAGTAGAGGCTGTGG...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGATGTCAGTATGGGGGCTaGATCTTAGGAGCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGCQYGG*ILGAVP
Trigger: GGGCACGGCTCCTAAGATCCAGCCCCCATACTGACA...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACGTCCGTCTGTCAGTATaGGGGCTGGATCTTAGGAGC +
Preference number: 2 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHVRLSV*GLDLRS
Trigger: GCTCCTAAGATCCAGCCCCCATACTGACAGACGGAC...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR CAA 90 bp CGTATCCGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTTGTaGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCATGCAG +
Preference number: 2 (lower is better)
Translates to: RIRFCPHHSYSSKRL*FSCSMSTASSSAMQ
Trigger: CTGCATGGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCGGATACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR-3UTR GCA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATACTGGCTCCAGAGTCCTaGGTGTGTAAATGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: KERIMSLGACAPCLGEEILAPES*VCKCVC
Trigger: ACACACACATTTACACACGCAGGACTCTGGAGCCAG...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGGAGCTGGAACAGGTATaGCCCCCAAACCATAGGTGG +
Preference number: 2 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQELEQV*PPNHRW
Trigger: CCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTC...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTACTGGCTCCAGAGTCCTaGGTGTGTAAATGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVLAPES*VCKCVC
Trigger: ACACACACATTTACACACGCAGGACTCTGGAGCCAG...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp TATGCAGGTGCTAACGCGGCTTGGCTGTCACCTTCAATGCATCACCCGAAGCTGCTCTTAGAAAGGCAATaGTCCACATGCCTACTCATC +
Preference number: 2 (lower is better)
Translates to: YAGANAAWLSPSMHHPKLLLERQ*STCLLI
Trigger: GATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGAG...CAGCTTCGGGTGATGCATTGAAGGTGACAGCCAAGCCGCGTTAGCACCTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR-3UTR TCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCAGAAATATACACCACTaGACACCGAGCACATGGGAG +
Preference number: 2 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGRNIHH*TPSTWE
Trigger: CTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCT...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp TTAATATTTTATGCAGGTGCTAACGCGGCTTGGCTGTCACCTTCAATGCATCACTACCCAGCAGAGGCCTaGCACCAGAGTGCCAATGTC +
Preference number: 2 (lower is better)
Translates to: LIFYAGANAAWLSPSMHHYPAEA*HQSANV
Trigger: GACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTA...GTGATGCATTGAAGGTGACAGCCAAGCCGCGTTAGCACCTGCATAAAATATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR-3UTR GCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCGCATGTTTGAGTATGTaGATGTATGTACATGGGGAA +
Preference number: 2 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVACLSM*MYVHGE
Trigger: TTCCCCATGTACATACATGCACATACTCAAACATGC...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp TGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACATGTGCTTCAGTCTaGTGTTTGCATGTCTGTCTG +
Preference number: 2 (lower is better)
Translates to: WEKKYTPLNTEHMGEGRDTCASV*CLHVCL
Trigger: CAGACAGACATGCAAACACCAGACTGAAGCACATGT...GTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTGGTCTATATTACATGTaGTTCAGTCTGGTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGGLYYM*FSLVFA
Trigger: TGCAAACACCAGACTGAAGCACATGTAATATAGACC...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCCCAGCAGGTAGTGCCTaGGCCACAGCCTCTACTCTG +
Preference number: 2 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCPAGSA*ATASTL
Trigger: CAGAGTAGAGGCTGTGGCCCAGGCACTACCTGCTGG...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCGAGCTGGAACAGGTATaGCCCCCAAACCATAGGTGG +
Preference number: 2 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVELEQV*PPNHRW
Trigger: CCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTC...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCAGGTACCCCAAGAGGTaGATGGGCCGAGCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSRYPKR*MGRAPS
Trigger: GCTGGGAGCTCGGCCCATCCACCTCTTGGGGTACCT...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCATGTTTGAGTATGTaGATGTATGTACATGGGGAA +
Preference number: 2 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGACLSM*MYVHGE
Trigger: TTCCCCATGTACATACATGCACATACTCAAACATGC...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTAGGTCTATATTACATGTaGTTCAGTCTGGTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVGLYYM*FSLVFA
Trigger: TGCAAACACCAGACTGAAGCACATGTAATATAGACC...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGGGTCTATATTACATGTaGTTCAGTCTGGTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQGLYYM*FSLVFA
Trigger: TGCAAACACCAGACTGAAGCACATGTAATATAGACC...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCGAGGATCATGTCCCTTaGGGCGTGTGCCCCATGTCT +
Preference number: 2 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSEDHVP*GVCPMS
Trigger: AGACATGGGGCACACGCCCCAAGGGACATGATCCTC...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCGAGCTGGAACAGGTATaGCCCCCAAACCATAGGTGG +
Preference number: 2 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSELEQV*PPNHRW
Trigger: CCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTC...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACAACATGTGCTTCAGTCTaGTGTTTGCATGTCTGTCTG +
Preference number: 2 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITTCASV*CLHVCL
Trigger: CAGACAGACATGCAAACACCAGACTGAAGCACATGT...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR GCA 90 bp CACAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTTTGAGTATGTaGATGTATGTACATGGGGAA +
Preference number: 2 (lower is better)
Translates to: HNIVNIHGLYYMCFSLVFACLSM*MYVHGE
Trigger: TTCCCCATGTACATACATGCACATACTCAAACATGC...AAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR CCA 72 bp GCCCCACCAGCAGCAGTCCCCACGTGGTGGAACGGATaGATGACCAGCCACCAGCCTCGGCCTCTTGGCTTC +
Preference number: 3 (lower is better)
Translates to: APPAAVPTWWNG*MTSHQPRPLGF
Trigger: GAAGCCAAGAGGCCGAGGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR TCA 72 bp CACCAGCAGCAGTCCCCACGTGGTGGAACGGATGGATaGCCAGCCACCAGCCTCGGCCTCTTGGCTTCCAGC +
Preference number: 3 (lower is better)
Translates to: HQQQSPRGGTDG*PATSLGLLASS
Trigger: GCTGGAAGCCAAGAGGCCGAGGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR GCA 72 bp ATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTaGCAGGGGGCGGTTGCACAGGGGACATACCTGCCC +
Preference number: 3 (lower is better)
Translates to: MLHMPTHLLLRS*QGAVAQGTYLP
Trigger: GGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR CCA 72 bp CCCTGCCCCACCCTGGGAACAGAGCTGGAACAGGTATaGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGT +
Preference number: 3 (lower is better)
Translates to: PCPTLGTELEQV*PPNHRWEPAGS
Trigger: ACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAGGGTGGGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR GCA 72 bp GGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTaGTTGTACCTCGGAAGCCACCTTCCAGGAGAGTGG +
Preference number: 3 (lower is better)
Translates to: GLAPECQCLRVS*LYLGSHLPGEW
Trigger: CCACTCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR-3UTR CAA 90 bp CAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCATGCCCTGCCAGGGGGCGGTaGCACAGGGGACATACCTGC +
Preference number: 3 (lower is better)
Translates to: QSGCCSHARCPQHHPQPCPARGR*HRGHTC
Trigger: GCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGG...GCATGGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR GCA 72 bp TTAGAAAGGCAATGCTCCACATGCCTACTCATCTCCTaGTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGA +
Preference number: 3 (lower is better)
Translates to: LERQCSTCLLIS*SDPARGRLHRG
Trigger: TCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCCTTTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR CCA 72 bp AGCCAGCAGGTAGTGCCTGGGCCACAGCCTCTACTCTaGCTCCAGAGTCCTGCGTGTGTAAATGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SQQVVPGPQPLL*LQSPACVNVCV
Trigger: CACACACACATTTACACACGCAGGACTCTGGAGCCAGAGTAGAGGCTGTGGCCCAGGCACTACCTGCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR GCA 72 bp AGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTaGCAATGTCTACGTGTCAGCTGCTTGTACCTCGGA +
Preference number: 3 (lower is better)
Translates to: SRWIPSRGLAPE*QCLRVSCLYLG
Trigger: TCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR CCA 72 bp TGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTGGTaGCCCGTATCCGCTTCTGTCCACACCACTCATACT +
Preference number: 3 (lower is better)
Translates to: CLYLGSHLPGEW*PVSASVHTTHT
Trigger: AGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTGGCTTCCGAGGTACAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR-3UTR CAA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCGCTTCAGTCTGGTGTTaGCATGTCTGTCTGTCCGTC +
Preference number: 3 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVASVWC*HVCLSV
Trigger: GACGGACAGACAGACATGCAAACACCAGACTGAAGC...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CAA 90 bp TGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTCCTCAAAGCGGTTGTaGTTCTCATGCTCGATGTCC +
Preference number: 3 (lower is better)
Translates to: WHQSANVYVSAACTSEATSSKRL*FSCSMS
Trigger: GGACATCGAGCATGAGAACAACAACCGCTTTGAGGA...GGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR-3UTR CAA 90 bp TGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACGCTTCAGTCTGGTGTTaGCATGTCTGTCTGTCCGTC +
Preference number: 3 (lower is better)
Translates to: WEKKYTPLNTEHMGEGRDASVWC*HVCLSV
Trigger: GACGGACAGACAGACATGCAAACACCAGACTGAAGC...GTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CAA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCGCTTCAGTCTGGTGTTaGCATGTCTGTCTGTCCGTC +
Preference number: 3 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSASVWC*HVCLSV
Trigger: GACGGACAGACAGACATGCAAACACCAGACTGAAGC...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR-3UTR CAA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGTAGAGGGCGAGGAGTaGTCCCATTTATACACAACA +
Preference number: 3 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKVEGEE*SHLYTT
Trigger: TGTTGTGTATAAATGGGACAACTCCTCGCCCTCTAC...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR GCA 72 bp ACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTaGATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCT +
Preference number: 3 (lower is better)
Translates to: TRSILHVLQSGV*MSVCPSVSMGA
Trigger: AGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR CCA 72 bp GTCCCTTTAATATTTTATGCAGGTGCTAACGCGGCTTaGCTGTCACCTTCAATGCATCACCCGAAGCTGAGA +
Preference number: 3 (lower is better)
Translates to: VPLIFYAGANAA*LSPSMHHPKLR
Trigger: TCTCAGCTTCGGGTGATGCATTGAAGGTGACAGCCAAGCCGCGTTAGCACCTGCATAAAATATTAAAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
3UTR GCA 72 bp CACAACATTGTAAACATACACGGTCTATATTACATGTaGTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGT +
Preference number: 3 (lower is better)
Translates to: HNIVNIHGLYYM*FSLVFACLSVR
Trigger: ACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CATCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGACATACCTGCCCGGTGGAACGGATGGATaGCCAGCCACCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: HLLLRSCQGAVAQGTYLPGGTDG*PATSLG
Trigger: GCCGAGGCTGGTGGCTGGTCATCCATCCGTTCCACC...GGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR TCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCGGTCTCCGGGCGCTGTaGTCGTGTTGCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSGLRAL*SCCTEG
Trigger: GCCCTCAGTGCAACACGATCACAGCGCCCGGAGACC...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGATTCCCCGTGGCTaGCCGGCGGCGGCGGCACTT +
Preference number: 4 (lower is better)
Translates to: QQRPGTRVPMSTCQLLVPRIPRG*PAAAAL
Trigger: AAGTGCCGCCGCCGCCGGGCAGCCACGGGGAATCCG...AGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR GCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGGCTGGAGGCGAGGCCTaGCTGGGGCAGATAGCTCAC +
Preference number: 4 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKAGGEA*LGQIAH
Trigger: GTGAGCTATCTGCCCCAGGCAGGCCTCGCCTCCAGC...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCCAACCCCCACCTCCCTaGCCCACCCTGGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSQPPPP*PTLGTE
Trigger: CTCTGTTCCCAGGGTGGGGCAGGGAGGTGGGGGTTG...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTTCTCCCGGTCCTCGGTaGAGGCAAAGGGCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRASPGPR*RQRAGK
Trigger: CTTTCCGGCCCTTTGCCTCCACCGAGGACCGGGAGA...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTGCAGGACCTGGCAGATaGGGCAAATTGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAAGPGR*GKLGPG
Trigger: GCCAGGCCCCAATTTGCCCCATCTGCCAGGTCCTGC...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTAGGTACCCCAAGAGGTaGATGGGCCGAGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRARYPKR*MGRAPS
Trigger: GCTGGGAGCTCGGCCCATCCACCTCTTGGGGTACCT...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGGGCCGGCGTAAAGGCTaGCTGATAGCTCTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWGRRKG*LIALPV
Trigger: GACCGGGAGAGCTATCAGTCAGCCTTTACGCCGGCC...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGCTCCCAGCCAACCCTaGAGGAGGCGCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPAPSQP*RRRCFQ
Trigger: CTGGAAGCAGCGCCTCCTTCAGGGTTGGCTGGGAGC...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGCTCCTGCTCCGATCCTaGCAGGGGGCGGTTGCACAG +
Preference number: 4 (lower is better)
Translates to: AEAWHQSANVYVSAACTSLLLRS*QGAVAQ
Trigger: CTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAG...CGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR GCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCGTCCCTTGGGGCGTGTaGCCCATGTCTGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSVPWGV*PMSGRR
Trigger: TCTTCTCCCAGACATGGGGCACACGCCCCAAGGGAC...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCGTCGGGTCTGCCGGTTaGCTCGTACTCGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSVGSAG*LVLAER
Trigger: CCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGAC...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCCAGGACCATCAGTGCTaGGGATGCCAGAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSQDHQC*GCQRVG
Trigger: CCCAACCCTCTGGCATCCCCAGCACTGATGGTCCTG...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTGCCGTTCAAGTTCTCTaGCCCGAGCCTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAAVQVL*PEPSEP
Trigger: AGGCTCTGAAGGCTCGGGTCAGAGAACTTGAACGGC...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCTCGGCCTGTCTACGTGTCAGCTaGTTGTACCTCGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSSPHVVERMDDQPPASACLRVS*LYLGSH
Trigger: GTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACA...GGCCGAGGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CCA 90 bp CCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGCCAGTCGGGTCTGCCGGTTaGCTCGTACTCGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: PLGFQQMDTQQRPGTRVPVGSAG*LVLAER
Trigger: CCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGAC...TGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTTCTCCCGGTCCTCGGTaGAGGCAAAGGGCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPSPGPR*RQRAGK
Trigger: CTTTCCGGCCCTTTGCCTCCACCGAGGACCGGGAGA...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGACCGGGGGAGCTAGATaGCAGCTGTGTCCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKTGGAR*QLCPKV
Trigger: GACTTTGGGACACAGCTGCCATCTAGCTCCCCCGGT...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGTTGCTCGAGGGCAGTTaGGCTAGCTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKLLEGS*ASCSSS
Trigger: GGAACTGGAGCAGCTAGCCCAACTGCCCTCGAGCAA...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCGGACTTTGGGGTGCCTaGAGCCATGGCATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSGLWGA*SHGILQ
Trigger: CTGAAGGATGCCATGGCTCCAGGCACCCCAAAGTCC...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGGGTGGAGGTCATCGGTaGCAGATGAGTGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKGGGHR*QMSGVM
Trigger: CATCACCCCACTCATCTGCCACCGATGACCTCCACC...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCGGTGGAGGTCATCGGTaGCAGATGAGTGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSGGGHR*QMSGVM
Trigger: CATCACCCCACTCATCTGCCACCGATGACCTCCACC...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAAGGTACCCCAAGAGGTaGATGGGCCGAGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPARYPKR*MGRAPS
Trigger: GCTGGGAGCTCGGCCCATCCACCTCTTGGGGTACCT...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTGAGGATCATGTCCCTTaGGGCGTGTGCCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAEDHVP*GVCPMS
Trigger: AGACATGGGGCACACGCCCCAAGGGACATGATCCTC...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCAAGGGTCGTGGCTGCTaGCAAGGGATGGAAGCATCA +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSKGRGC*QGMEAS
Trigger: TGATGCTTCCATCCCTTGTCAGCAGCCACGACCCTT...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGCATTCAGTCGGGTCTaGCGGTTGGCTCGTACTCGC +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPAFSRV*RLARTR
Trigger: GCGAGTACGAGCCAACCGGCAGACCCGACTGAATGC...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGGCATGGCCTCCTGCTTaGTGCTTTCACCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKAWPPA*CFHHCW
Trigger: CCAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGC...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGTGCCAGGACCATCAGTaGTGGGGATGCCAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWCQDHQ*WGCQRV
Trigger: AACCCTCTGGCATCCCCAGCACTGATGGTCCTGGCA...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTTCCTCGCAGTGCACGTaGCAACACTGGATGGACGTT +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRASSQCT*QHWMDV
Trigger: AACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGA...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCGGCCTGGCACCAGAGTaGCAATGTCTACGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: NAPHAYSSPAPILPGGGCGLAPE*QCLRVS
Trigger: GCTGACACGTAGACATTGGCACTCTGGTGCCAGGCC...GCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CCA 90 bp TATTTTATGCAGGTGCTAACGCGGCTTGGCTGTCACCTTCAATGCATCACCCGATCTAACGGGACCCCGTaGCCGCTGCGCGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: YFMQVLTRLGCHLQCITRSNGTP*PLRGAA
Trigger: GGCGGCACCGCGCAGCGGCCACGGGGTCCCGTTAGA...TCGGGTGATGCATTGAAGGTGACAGCCAAGCCGCGTTAGCACCTGCATAAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGCGGAGTCTCTTTCTGTaGCCGGCGTTACGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKRSLFL*PALRKK
Trigger: CTTCTTGCGTAACGCCGGCCACAGAAAGAGACTCCG...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTTGGAAGCATCACGGCTaGCCTCAGCCGTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPWKHHG*PQPWMP
Trigger: TGGCATCCACGGCTGAGGCCAGCCGTGATGCTTCCA...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGACCGGGGGAGCTAGATaGCAGCTGTGTCCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWTGGAR*QLCPKV
Trigger: GACTTTGGGACACAGCTGCCATCTAGCTCCCCCGGT...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGTTGCTCGAGGGCAGTTaGGCTAGCTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWLLEGS*ASCSSS
Trigger: GGAACTGGAGCAGCTAGCCCAACTGCCCTCGAGCAA...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGCCACAGCCTCTACTCTaGCTCCAGAGTCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWPQPLL*LQSPAC
Trigger: ACACGCAGGACTCTGGAGCCAGAGTAGAGGCTGTGG...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTGAGCTGGAACAGGTATaGCCCCCAAACCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAELEQV*PPNHRW
Trigger: CCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTC...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTGTCCGTCTGTCAGTATaGGGGCTGGATCTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAVRLSV*GLDLRS
Trigger: GCTCCTAAGATCCAGCCCCCATACTGACAGACGGAC...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTGATCTAATCAGTGAATaGGCCTCCACTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRADLISE*ASTLPG
Trigger: CCCTGGGAGAGTGGAGGCTCATTCACTGATTAGATC...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355387.6
CDS-3UTR TCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGAAGGGTCGTGGCTGCTaGCAAGGGATGGAAGCATCA +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWKGRGC*QGMEAS
Trigger: TGATGCTTCCATCCCTTGTCAGCAGCCACGACCCTT...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTGCCCCCACACCACTATaGTTCAGCATACTGATTGGG +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAAPTPL*FSILIG
Trigger: CCCAATCAGTATGCTGAATCATAGTGGTGTGGGGGC...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGGGCCGGCGTAAAGGCTaGCTGATAGCTCTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWGRRKG*LIALPV
Trigger: GACCGGGAGAGCTATCAGTCAGCCTTTACGCCGGCC...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTGGTCTCCGGGCGCTGTaGTCGTGTTGCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGGLRAL*SCCTEG
Trigger: GCCCTCAGTGCAACACGATCACAGCGCCCGGAGACC...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATAGCTCCCAGCCAACCCTaGAGGAGGCGCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KERIMSLGACAPCLGEEIAPSQP*RRRCFQ
Trigger: CTGGAAGCAGCGCCTCCTTCAGGGTTGGCTGGGAGC...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTTGCCTACTCATCTCCTaGTCCGATCCTGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QQRPGTRVPMSTCQLLVPCLLIS*SDPARG
Trigger: CCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCA...AGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR GCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGAGGCGGAGAGTGTGGTaGATGAAAAGTCCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWRRRVW*MKSPGF
Trigger: GAACCCGGGACTTTTCATGCACCACACTCTCCGCCT...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCATGCCAGGACCATCAGTaGTGGGGATGCCAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPACQDHQ*WGCQRV
Trigger: AACCCTCTGGCATCCCCAGCACTGATGGTCCTGGCA...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGGGCCTCAGCCGTGGATaGCAGGACCATCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWGLSRG*QDHQCW
Trigger: CCAGCACTGATGGTCCTGGCATCCACGGCTGAGGCC...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGCAGGAGCCTTCCCTCTaGCCTTCATCTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWQEPSL*PSSCFL
Trigger: GAGGAAGCAAGATGAAGGGCAGAGGGAAGGCTCCTG...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTCAGCACTCCTCGCAGTaGACGTGCCAACACTGGATG +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPQHSSQ*TCQHWM
Trigger: CATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTG...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCACCATTGCTGGTGGATaGCATCTCATCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSTIAGG*HLITGP
Trigger: TGGGCCAGTGATGAGATGCCATCCACCAGCAATGGT...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGACCATTGCTGGTGGATaGCATCTCATCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKTIAGG*HLITGP
Trigger: TGGGCCAGTGATGAGATGCCATCCACCAGCAATGGT...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTAGCAGGCGGAGAGTGTaGTGCATGAAAAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPSRRRV*CMKSPG
Trigger: CCCGGGACTTTTCATGCACCACACTCTCCGCCTGCT...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGGGCCAACCAGCACTTTaGGTCAGGGCAGGGAATATT +
Preference number: 4 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKGQPAL*VRAGNI
Trigger: AATATTCCCTGCCCTGACCCAAAGTGCTGGTTGGCC...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACACCACAGGGCCCACGGGAGGGTCGGGGAGACGACACTTTTTCCCTGGGAAAGTACACCAAAGGGTCGTaGCTGCTGACAAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: TPQGPREGRGDDTFSLGKYTKGS*LLTRDG
Trigger: TCCATCCCTTGTCAGCAGCCACGACCCTTTGGTGTA...CTTTCCCAGGGAAAAAGTGTCGTCTCCCCGACCCTCCCGTGGGCCCTGTGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGGCAAATTGGGGCCTaGCTGTCGAACAATGCCGCT +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPGQIGA*LSNNAA
Trigger: AGCGGCATTGTTCGACAGCCAGGCCCCAATTTGCCC...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCATCGGTGGCAGATGAGTaGGGTGATGCCGTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPASVADE*GDAVGD
Trigger: GTCTCCAACGGCATCACCCCACTCATCTGCCACCGA...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTTCGGTGGCAGATGAGTaGGGTGATGCCGTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPSVADE*GDAVGD
Trigger: GTCTCCAACGGCATCACCCCACTCATCTGCCACCGA...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCCTCCCTGCCCCACCCTaGGAACAGAGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVLPAPP*EQSWNR
Trigger: CCTGTTCCAGCTCTGTTCCCAGGGTGGGGCAGGGAG...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGAGGATCATGTCCCTTaGGGCGTGTGCCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPEDHVP*GVCPMS
Trigger: AGACATGGGGCACACGCCCCAAGGGACATGATCCTC...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GAAAGGCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCCAGCCTCGGCCTCTTaGCTTCCAGCAGATGGATAC +
Preference number: 4 (lower is better)
Translates to: ERQCSTCLLISCSDPARGPASAS*LPADGY
Trigger: GTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGG...CCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CCA 90 bp GTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTGGTGGCACGTGGTGGAACGGATaGATGACCAGCCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: VYVSAACTSEATFQESGGTWWNG*MTSHQP
Trigger: AGGCTGGTGGCTGGTCATCCATCCGTTCCACCACGT...GCCACCACTCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR TCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCATGAGTTCTCCATCTTaGAGGCTGCCCGGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSMSSPS*RLPGVS
Trigger: ACTTACACCGGGCAGCCTTCAAGATGGAGAACTCAT...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGCATGGCCTCCTGCTTaGTGCTTTCACCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPAAWPPA*CFHHCW
Trigger: CCAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGC...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGTTCTTGCAGGTCTTCTaGATGGCCTCCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWFLQVF*MASCLL
Trigger: CAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAA...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGAGAAGGAGCAGTGCTaGCTCTCAGCGCTGGATCTA +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPAEKEQC*LSALDL
Trigger: TAGATCCAGCGCTGAGAGGCAGCACTGCTCCTTCTC...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355387.6
ENST00000361799.7
CDS-3UTR GCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTAGCTGCTCCAGTTCCTaGTCCATATGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPSCSSS*SICSCS
Trigger: GCTGCAGGAGCATATGGAGCAGGAACTGGAGCAGCT...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCATCCTCGCAGTGCACGTaGCAACACTGGATGGACGTT +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPASSQCT*QHWMDV
Trigger: AACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGA...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGAGGCGAGGCCTaGCTGGGGCAGATAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGAGGEA*LGQIAH
Trigger: GTGAGCTATCTGCCCCAGGCAGGCCTCGCCTCCAGC...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCTGGCTCCAGAGTCCTaGGTGTGTAAATGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRALAPES*VCKCVC
Trigger: ACACACACATTTACACACGCAGGACTCTGGAGCCAG...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGCAACCCCCACCTCCCTaGCCCACCCTGGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGQPPPP*PTLGTE
Trigger: CTCTGTTCCCAGGGTGGGGCAGGGAGGTGGGGGTTG...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCCTTCCAGGAGAGTGGTaGCCCGTATCCGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SRWIPSRGLAPECQCLRVLPGEW*PVSASV
Trigger: GACAGAAGCGGATACGGGCCACCACTCTCCTGGAAG...GACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CCA 90 bp AGCAGATGGATACCCAGCAGAGGCCTGGCACCAGAGTGCCAATGTCTACGTGTCCACCTTCCAGGAGAGTaGTGGCCCGTATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRWIPSRGLAPECQCLRVHLPGE*WPVSAS
Trigger: AGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTG...GACACGTAGACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTATCCATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCTCAGAGCCTCAAACGTaGTCACAGCTGAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSSEPQT*SQLNLR
Trigger: CCGAAGATTCAGCTGTGACCACGTTTGAGGCTCTGA...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCACGGAGTCTCTTTCTGTaGCCGGCGTTACGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPARSLFL*PALRKK
Trigger: CTTCTTGCGTAACGCCGGCCACAGAAAGAGACTCCG...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTACCCCACCTTGCCGATaGTACATAGAGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRATPPCR*YIEAKV
Trigger: TACCTTTGCCTCTATGTACCATCGGCAAGGTGGGGT...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAATTGGCAAAAGTGCCTaGCACCCCACCTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPAIGKSA*HPTLPM
Trigger: CATCGGCAAGGTGGGGTGCCAGGCACTTTTGCCAAT...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGAGAGGGCAGAGCTTCTTaGCACCCAGGGTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGEGRAS*HPGSAA
Trigger: GGCTGCGGACCCTGGGTGCCAAGAAGCTCTGCCCTC...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGAGCTGGAACAGGTATaGCCCCCAAACCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPELEQV*PPNHRW
Trigger: CCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTC...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGGGAGAGTGTGGTGCATaGAAAGTCCCGGGTTCGCAG +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWGECGA*KVPGSQ
Trigger: CTGCGAACCCGGGACTTTTCATGCACCACACTCTCC...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGATGAGTTCTCCATCTTaGAGGCTGCCCGGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWMSSPS*RLPGVS
Trigger: ACTTACACCGGGCAGCCTTCAAGATGGAGAACTCAT...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCAGAAATATACACCACTaGACACCGAGCACATGGGAG +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSRNIHH*TPSTWE
Trigger: CTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCT...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAATAGCCGCCGGGCGCTaGTCTAACGGGACCCCGTGG +
Preference number: 4 (lower is better)
Translates to: YSSKRLLFSCSMSTASSSIAAGR*SNGTPW
Trigger: CCACGGGGTCCCGTTAGAGCAGCGCCCGGCGGCTAT...TGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR GCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCGGTTGTTGTTCTCATaGTCGATGTCCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRARLLFS*SMSTAS
Trigger: TGATGCTGTGGACATCGAGCATGAGAACAACAACCG...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCATCCCCACGAGATAGCTaGCGTTCAAGTTCTCTGACC +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPASPRDS*RSSSLT
Trigger: GGTCAGAGAACTTGAACGGCAGCTATCTCGTGGGGA...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGAGGCCTCAGCCGTGGATaGCAGGACCATCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGGLSRG*QDHQCW
Trigger: CCAGCACTGATGGTCCTGGCATCCACGGCTGAGGCC...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCCCTGGCACCCCACCTTaGCGATGGTACATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVPGTPP*RWYIEA
Trigger: TGCCTCTATGTACCATCGGCAAGGTGGGGTGCCAGG...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGCACGATTGGCAAAAGTaGCTGGCACCCCACCTTGCC +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWHDWQK*LAPHLA
Trigger: GGCAAGGTGGGGTGCCAGGCACTTTTGCCAATCGTG...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCTGGCTGTCGAACAATaGCGCTGCTTTCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRALAVEQ*RCFLLT
Trigger: TGTAAGAAGAAAGCAGCGGCATTGTTCGACAGCCAG...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAGCTGGAGGCGAGGCCTaGCTGGGGCAGATAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGAGGEA*LGQIAH
Trigger: GTGAGCTATCTGCCCCAGGCAGGCCTCGCCTCCAGC...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTGTCCCTTGGGGCGTGTaGCCCATGTCTGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGVPWGV*PMSGRR
Trigger: TCTTCTCCCAGACATGGGGCACACGCCCCAAGGGAC...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTTTTCACCATTGCTGGTaGATGGCATCTCATCACTGG +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAFHHCW*MASHHW
Trigger: CCAGTGATGAGATGCCATCCACCAGCAATGGTGAAA...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCATACACCAAAGGGTCGTaGCTGCTGACAAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPAYTKGS*LLTRDG
Trigger: TCCATCCCTTGTCAGCAGCCACGACCCTTTGGTGTA...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCACCGGGGGAGCTAGATaGCAGCTGTGTCCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVTGGAR*QLCPKV
Trigger: GACTTTGGGACACAGCTGCCATCTAGCTCCCCCGGT...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGGGGCAAATTGGGGCCTaGCTGTCGAACAATGCCGCT +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWGQIGA*LSNNAA
Trigger: AGCGGCATTGTTCGACAGCCAGGCCCCAATTTGCCC...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCAGGACCTGGCAGATaGGGCAAATTGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGAGPGR*GKLGPG
Trigger: GCCAGGCCCCAATTTGCCCCATCTGCCAGGTCCTGC...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTGGCCTCAGCAGGACCTaGCAGATGGGGCAAATTGGG +
Preference number: 4 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGGLSRT*QMGQIG
Trigger: CCCAATTTGCCCCATCTGCCAGGTCCTGCTGAGGCC...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTTGCTCGAGGGCAGTTaGGCTAGCTGCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVLLEGS*ASCSSS
Trigger: GGAACTGGAGCAGCTAGCCCAACTGCCCTCGAGCAA...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCGGTGGAGGTCATCGGTaGCAGATGAGTGGGGTGATG +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVGGGHR*QMSGVM
Trigger: CATCACCCCACTCATCTGCCACCGATGACCTCCACC...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTTATCTGTCTGAATGGTaGAGGTCATCGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAYLSEW*RSSVAD
Trigger: ATCTGCCACCGATGACCTCCACCATTCAGACAGATA...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGAGGGCAGAGCTTCTTaGCACCCAGGGTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKEGRAS*HPGSAA
Trigger: GGCTGCGGACCCTGGGTGCCAAGAAGCTCTGCCCTC...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTCCCCCAAACCATAGGTaGGAGCCAGCAGGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGPPNHR*EPAGSA
Trigger: GGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGG...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACCTCCCTGCCCCACCCTaGGAACAGAGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: WEKKYTPLNTEHMGEGRDLPAPP*EQSWNR
Trigger: CCTGTTCCAGCTCTGTTCCCAGGGTGGGGCAGGGAG...GTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTACTCCCTGCCCCACCCTaGGAACAGAGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVLPAPP*EQSWNR
Trigger: CCTGTTCCAGCTCTGTTCCCAGGGTGGGGCAGGGAG...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCTACCCAGCAGAGGCCTaGCACCAGAGTGCCAATGTC +
Preference number: 4 (lower is better)
Translates to: TRVPMSTCQLLVPRKPPSYPAEA*HQSANV
Trigger: GACATTGGCACTCTGGTGCCAGGCCTCTGCTGGGTA...GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR TCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGCGCCTGTGCAGGGGATaGCATCAGCCTCTGTGTATT +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWRLCRG*HQPLCI
Trigger: AATACACAGAGGCTGATGTCATCCCCTGCACAGGCG...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAACTCTCCTTCCCTCTTaGTGGAAGCAGACAACAGGA +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPATLLPS*WKQTTG
Trigger: TCCTGTTGTCTGCTTCCATCAAGAGGGAAGGAGAGT...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGTCTCCGGGCGCTGTaGTCGTGTTGCACTGAGGGC +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWGLRAL*SCCTEG
Trigger: GCCCTCAGTGCAACACGATCACAGCGCCCGGAGACC...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTGCTCCCAGCCAACCCTaGAGGAGGCGCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCAPSQP*RRRCFQ
Trigger: CTGGAAGCAGCGCCTCCTTCAGGGTTGGCTGGGAGC...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCGCATTCAGTCGGGTCTaGCGGTTGGCTCGTACTCGC +
Preference number: 4 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGAFSRV*RLARTR
Trigger: GCGAGTACGAGCCAACCGGCAGACCCGACTGAATGC...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCAGCAGCAGTCCGGTTGTTGTTCTCATaGTCGATGTCCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: MHITGRQHGHKGAPPAAVRLLFS*SMSTAS
Trigger: TGATGCTGTGGACATCGAGCATGAGAACAACAACCG...GACTGCTGCTGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR GCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGCCTCAGCCGTGGATaGCAGGACCATCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKGLSRG*QDHQCW
Trigger: CCAGCACTGATGGTCCTGGCATCCACGGCTGAGGCC...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACGGAGGGACTTTGGGGTaGCTGGAGCCATGGCATCCT +
Preference number: 4 (lower is better)
Translates to: WEKKYTPLNTEHMGEGRDGGTLG*LEPWHP
Trigger: AGGATGCCATGGCTCCAGGCACCCCAAAGTCCCTCC...GTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCCAGGAGCCTTCCCTCTaGCCTTCATCTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVQEPSL*PSSCFL
Trigger: GAGGAAGCAAGATGAAGGGCAGAGGGAAGGCTCCTG...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGTCGGGTCTGCCGGTTaGCTCGTACTCGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGVGSAG*LVLAER
Trigger: CCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGAC...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGAGCCTCTGTGTATTGTaGCTTCCCATACTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWSLCVL*LPILQS
Trigger: ACTCTGGAGTATGGGAAGCCACAATACACAGAGGCT...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTTGTTCGCGAGCTGCCTaGGATTGCATGTACAGATCA +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPCSRAA*DCMYRS
Trigger: TGATCTGTACATGCAATCCCAGGCAGCTCGCGAACA...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATAGCTGCTGACAAGGGATaGAAGCATCACGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KERIMSLGACAPCLGEEIAADKG*KHHGWP
Trigger: AGGCCAGCCGTGATGCTTCCATCCCTTGTCAGCAGC...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGGGGGGAAATCACGATTaGCAAAAGTGCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWGGNHD*QKCLAP
Trigger: GGGTGCCAGGCACTTTTGCCAATCGTGATTTCCCCC...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGTCTCCCGGTCCTCGGTaGAGGCAAAGGGCCGGAAAG +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQSPGPR*RQRAGK
Trigger: CTTTCCGGCCCTTTGCCTCCACCGAGGACCGGGAGA...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGTATCTGTCTGAATGGTaGAGGTCATCGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWYLSEW*RSSVAD
Trigger: ATCTGCCACCGATGACCTCCACCATTCAGACAGATA...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTACCCCCAAACCATAGGTaGGAGCCAGCAGGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVPPNHR*EPAGSA
Trigger: GGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGG...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCGAGCTGGAACAGGTATaGCCCCCAAACCATAGGTGG +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVELEQV*PPNHRW
Trigger: CCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTC...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTGAGGATCATGTCCCTTaGGGCGTGTGCCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGEDHVP*GVCPMS
Trigger: AGACATGGGGCACACGCCCCAAGGGACATGATCCTC...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACGTTCTCAGCAGAGGCTaGGTGGCCAGGAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: WEKKYTPLNTEHMGEGRDVLSRG*VARSTV
Trigger: GACAGTGCTCCTGGCCACCCAGCCTCTGCTGAGAAC...GTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TATGCAGGTGCTAACGCGGCTTGGCTGTCACCTTCAATGCATCACCCGAAGCTGTTGGCTTCCAGCAGATaGATACCCAGCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: YAGANAAWLSPSMHHPKLLASSR*IPSRGL
Trigger: CAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAA...CAGCTTCGGGTGATGCATTGAAGGTGACAGCCAAGCCGCGTTAGCACCTGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR TCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGGCTGGATCTAATCAGTaGATGAGCCTCCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWAGSNQ*MSLHSP
Trigger: GGGAGAGTGGAGGCTCATTCACTGATTAGATCCAGC...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355387.6
CDS-3UTR TCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACGGAGAGTGTGGTGCATaGAAAGTCCCGGGTTCGCAG +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHGECGA*KVPGSQ
Trigger: CTGCGAACCCGGGACTTTTCATGCACCACACTCTCC...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGCACGTCCTTGTCAACTaGGACAGGTACACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWHVLVN*DRYTKG
Trigger: CCCTTTGGTGTACCTGTCTCAGTTGACAAGGACGTG...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTGGCCGGCGTAAAGGCTaGCTGATAGCTCTCCCGGTC +
Preference number: 4 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCGRRKG*LIALPV
Trigger: GACCGGGAGAGCTATCAGTCAGCCTTTACGCCGGCC...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGACGAGTCCATGCAGATaGGGCATTTGTAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWTSPCR*GICNGP
Trigger: GGGACCGTTACAAATGCCTCATCTGCATGGACTCGT...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGCATTCAGTCGGGTCTaGCGGTTGGCTCGTACTCGC +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKAFSRV*RLARTR
Trigger: GCGAGTACGAGCCAACCGGCAGACCCGACTGAATGC...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCACGGTTGTTGTTCTCATaGTCGATGTCCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPARLLFS*SMSTAS
Trigger: TGATGCTGTGGACATCGAGCATGAGAACAACAACCG...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGGACTGCGCCCCGAAGTaGCTCTCTCTCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQDCAPK*LSLLGF
Trigger: GAAGCCAAGGAGAGAGAGGCACTTCGGGGCGCAGTC...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGACTGCGCCCCGAAGTaGCTCTCTCTCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKDCAPK*LSLLGF
Trigger: GAAGCCAAGGAGAGAGAGGCACTTCGGGGCGCAGTC...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTCCCCACGAGATAGCTaGCGTTCAAGTTCTCTGACC +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVSPRDS*RSSSLT
Trigger: GGTCAGAGAACTTGAACGGCAGCTATCTCGTGGGGA...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCTTGGTGAAAGGAATATaGACGTCCTTGTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: TPQERERQVPQEVDGPSSLVKGI*TSLSTE
Trigger: CTCAGTTGACAAGGACGTGCATATTCCTTTCACCAA...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCCCTGGCACCCCACCTTaGCGATGGTACATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGPGTPP*RWYIEA
Trigger: TGCCTCTATGTACCATCGGCAAGGTGGGGTGCCAGG...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGCCTGGCACCCCACCTTaGCGATGGTACATAGAGGCA +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGPGTPP*RWYIEA
Trigger: TGCCTCTATGTACCATCGGCAAGGTGGGGTGCCAGG...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGGTCGAACAATGCCGCTaGTTTCTTCTTACATCTGTC +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWVEQCR*FLLTSV
Trigger: GACAGATGTAAGAAGAAAGCAGCGGCATTGTTCGAC...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCTGCTCCATATGCTCCTaGAGCTCACTGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGCSICS*SSLGLS
Trigger: GCTGAGGCCCAGTGAGCTGCAGGAGCATATGGAGCA...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGTGCTCCATATGCTCCTaGAGCTCACTGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGCSICS*SSLGLS
Trigger: GCTGAGGCCCAGTGAGCTGCAGGAGCATATGGAGCA...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGGGAGGGACTTTGGGGTaGCTGGAGCCATGGCATCCT +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQGGTLG*LEPWHP
Trigger: AGGATGCCATGGCTCCAGGCACCCCAAAGTCCCTCC...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGCAGCACTCCTCGCAGTaGACGTGCCAACACTGGATG +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGQHSSQ*TCQHWM
Trigger: CATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTG...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGTCCCTTGGGGCGTGTaGCCCATGTCTGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKVPWGV*PMSGRR
Trigger: TCTTCTCCCAGACATGGGGCACACGCCCCAAGGGAC...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGCTTCCAGGAGAGTGGTaGCCCGTATCCGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGLPGEW*PVSASV
Trigger: GACAGAAGCGGATACGGGCCACCACTCTCCTGGAAG...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCCTTCCAGGAGAGTGGTaGCCCGTATCCGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGLPGEW*PVSASV
Trigger: GACAGAAGCGGATACGGGCCACCACTCTCCTGGAAG...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACCACCTTCCAGGAGAGTaGTGGCCCGTATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: WEKKYTPLNTEHMGEGRDHLPGE*WPVSAS
Trigger: AGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTG...GTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCTTCCAGGAGAGTaGTGGCCCGTATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGHLPGE*WPVSAS
Trigger: AGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTG...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCCACCTTCCAGGAGAGTaGTGGCCCGTATCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGHLPGE*WPVSAS
Trigger: AGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTG...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCATGCTTTCACCATTGCTaGTGGATGGCATCTCATCAC +
Preference number: 4 (lower is better)
Translates to: LGTELEQVWPPNHRWEPACFHHC*WMASHH
Trigger: GTGATGAGATGCCATCCACCAGCAATGGTGAAAGCA...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGCAGGCGGAGAGTGTaGTGCATGAAAAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSSRRRV*CMKSPG
Trigger: CCCGGGACTTTTCATGCACCACACTCTCCGCCTGCT...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGGACCATCAGTGCTaGGGATGCCAGAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQQDHQC*GCQRVG
Trigger: CCCAACCCTCTGGCATCCCCAGCACTGATGGTCCTG...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGAGACTCTGTGTCATaGCAGTTCTTAAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPGDSVS*QFLSRL
Trigger: CAAGCGACTTAAGAACTGCCATGACACAGAGTCTCC...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGGGCAAATTGGGGCCTaGCTGTCGAACAATGCCGCT +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGGQIGA*LSNNAA
Trigger: AGCGGCATTGTTCGACAGCCAGGCCCCAATTTGCCC...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACGGACTTTGGGGTGCCTaGAGCCATGGCATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHGLWGA*SHGILQ
Trigger: CTGAAGGATGCCATGGCTCCAGGCACCCCAAAGTCC...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGCAACAGGAGGGACTTTaGGGTGCCTGGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKQQEGL*GAWSHG
Trigger: GCCATGGCTCCAGGCACCCCAAAGTCCCTCCTGTTG...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGTCGGTGGCAGATGAGTaGGGTGATGCCGTTGGAGAC +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGSVADE*GDAVGD
Trigger: GTCTCCAACGGCATCACCCCACTCATCTGCCACCGA...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGACCAGCAGGTAGTGCCTaGGCCACAGCCTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGPAGSA*ATASTL
Trigger: CAGAGTAGAGGCTGTGGCCCAGGCACTACCTGCTGG...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCCAGCAGGTAGTGCCTaGGCCACAGCCTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQPAGSA*ATASTL
Trigger: CAGAGTAGAGGCTGTGGCCCAGGCACTACCTGCTGG...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGATGTCAGTATGGGGGCTaGATCTTAGGAGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGCQYGG*ILGAVP
Trigger: GGGCACGGCTCCTAAGATCCAGCCCCCATACTGACA...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACTGTCAGTATGGGGGCTaGATCTTAGGAGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: WEKKYTPLNTEHMGEGRDCQYGG*ILGAVP
Trigger: GGGCACGGCTCCTAAGATCCAGCCCCCATACTGACA...GTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGACATGTGCTTCAGTCTaGTGTTTGCATGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWTCASV*CLHVCL
Trigger: CAGACAGACATGCAAACACCAGACTGAAGCACATGT...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCCATGGCAGTCCCCACGTGGTaGAACGGATGGATGACCAGC +
Preference number: 4 (lower is better)
Translates to: SKRLLFSCSMSTASSSAMAVPTW*NGWMTS
Trigger: GCTGGTCATCCATCCGTTCCACCACGTGGGGACTGC...CATGGCTGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CCA 90 bp ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCGGTGCTAACGCGGCTTaGCTGTCACCTTCAATGCAT +
Preference number: 4 (lower is better)
Translates to: TRVPMSTCQLLVPRKPPSGANAA*LSPSMH
Trigger: ATGCATTGAAGGTGACAGCCAAGCCGCGTTAGCACC...GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR TCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACCGCCTGTGCAGGGGATaGCATCAGCCTCTGTGTATT +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHRLCRG*HQPLCI
Trigger: AATACACAGAGGCTGATGTCATCCCCTGCACAGGCG...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTTATAGGAACCGTTGGTaGAAGGAATATGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPYRNRW*KEYARP
Trigger: AGGACGTGCATATTCCTTTCACCAACGGTTCCTATA...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp TGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACCTTGCCATCTGCATCTaGGAAGCGCAAGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: WEKKYTPLNTEHMGEGRDLAICI*EAQVGR
Trigger: TCTCCCCACTTGCGCTTCTCAGATGCAGATGGCAAG...GTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTAGTGATCGTGTTGCACTaGGGGCAGAGCTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVVIVLH*GQSFLA
Trigger: TGCCAAGAAGCTCTGCCCTCAGTGCAACACGATCAC...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TTTAATATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCAGCACACAGGGGACATACCTaGCCTTCATCTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FNMHITGRQHGHKGAPPAHRGHT*PSSCFL
Trigger: GAGGAAGCAAGATGAAGGGCAGGTATGTCCCCTGTG...TGCTGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCATATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR GCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGACTGCGCCCCGAAGTaGCTCTCTCTCCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWDCAPK*LSLLGF
Trigger: GAAGCCAAGGAGAGAGAGGCACTTCGGGGCGCAGTC...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACGAGAAGGAGCAGTGCTaGCTCTCAGCGCTGGATCTA +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHEKEQC*LSALDL
Trigger: TAGATCCAGCGCTGAGAGGCAGCACTGCTCCTTCTC...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355387.6
ENST00000361799.7
CDS-3UTR GCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTTTGTGTTCGCGAGCTaGCTGGGATTGCATGTACAG +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVFVFAS*LGLHVQ
Trigger: CTGTACATGCAATCCCAGGCAGCTCGCGAACACAAA...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGAGGCGGAGAGTGTGGTaGATGAAAAGTCCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGRRRVW*MKSPGF
Trigger: GAACCCGGGACTTTTCATGCACCACACTCTCCGCCT...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACAGGCGGAGAGTGTGGTaGATGAAAAGTCCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHRRRVW*MKSPGF
Trigger: GAACCCGGGACTTTTCATGCACCACACTCTCCGCCT...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGTTCCTGCTCCATATaGTCCTGCAGCTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSSSCSI*SCSSLG
Trigger: GCCCAGTGAGCTGCAGGAGCATATGGAGCAGGAACT...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCGGCAGTTGGGCTAGCTaGTCCAGTTCCTGCTCCATA +
Preference number: 4 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSGSWAS*SSSCSI
Trigger: TATGGAGCAGGAACTGGAGCAGCTAGCCCAACTGCC...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGAGGGACTTTGGGGTaGCTGGAGCCATGGCATCCT +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWGGTLG*LEPWHP
Trigger: AGGATGCCATGGCTCCAGGCACCCCAAAGTCCCTCC...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGATCCTCGCAGTGCACGTaGCAACACTGGATGGACGTT +
Preference number: 4 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGSSQCT*QHWMDV
Trigger: AACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGA...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGCACTCCTCGCAGTaGACGTGCCAACACTGGATG +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQQHSSQ*TCQHWM
Trigger: CATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTG...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGCTGGCTGGCTCCAGAGTCCTaGGTGTGTAAATGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ASVWCLHVCLSVCQYGGWLAPES*VCKCVC
Trigger: ACACACACATTTACACACGCAGGACTCTGGAGCCAG...CCAGCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGTGGAAGCATCACGGCTaGCCTCAGCCGTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWWKHHG*PQPWMP
Trigger: TGGCATCCACGGCTGAGGCCAGCCGTGATGCTTCCA...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGATTGGCAAAAGTGCCTaGCACCCCACCTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGIGKSA*HPTLPM
Trigger: CATCGGCAAGGTGGGGTGCCAGGCACTTTTGCCAAT...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATATCTGAGAAGCGCAAGTaGGGAGACTCTGTGTCATGG +
Preference number: 4 (lower is better)
Translates to: KERIMSLGACAPCLGEEISEKRK*GDSVSW
Trigger: CCATGACACAGAGTCTCCCCACTTGCGCTTCTCAGA...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTGGCCTCAGCAGGACCTaGCAGATGGGGCAAATTGGG +
Preference number: 4 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCGLSRT*QMGQIG
Trigger: CCCAATTTGCCCCATCTGCCAGGTCCTGCTGAGGCC...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGGGTGCCTGGAGCCATaGCATCCTTCAGAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGGCLEP*HPSEGN
Trigger: ATTCCCTTCTGAAGGATGCCATGGCTCCAGGCACCC...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCTGCACGTGCCAACACTaGATGGACGTTAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSCTCQH*MDVRGI
Trigger: GATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCA...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCCACAGCCTCTACTCTaGCTCCAGAGTCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQPQPLL*LQSPAC
Trigger: ACACGCAGGACTCTGGAGCCAGAGTAGAGGCTGTGG...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCGTCCGTCTGTCAGTATaGGGGCTGGATCTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSVRLSV*GLDLRS
Trigger: GCTCCTAAGATCCAGCCCCCATACTGACAGACGGAC...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGTTCTCAGCAGAGGCTaGGTGGCCAGGAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWVLSRG*VARSTV
Trigger: GACAGTGCTCCTGGCCACCCAGCCTCTGCTGAGAAC...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACTCCTCAAAGCGGTTGTTGTTCTCATGCTCGATGTCCACAGCATCATCCTCAGCAGCAGTCCCCACGTaGTGGAACGGATGGATGACC +
Preference number: 4 (lower is better)
Translates to: YSSKRLLFSCSMSTASSSAAVPT*WNGWMT
Trigger: GGTCATCCATCCGTTCCACCACGTGGGGACTGCTGC...TGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR TCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGCGCCTGTGCAGGGGATaGCATCAGCCTCTGTGTATT +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKRLCRG*HQPLCI
Trigger: AATACACAGAGGCTGATGTCATCCCCTGCACAGGCG...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTGCCGTTCAAGTTCTCTaGCCCGAGCCTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCAVQVL*PEPSEP
Trigger: AGGCTCTGAAGGCTCGGGTCAGAGAACTTGAACGGC...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTACACGTCCTTGTCAACTaGGACAGGTACACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVHVLVN*DRYTKG
Trigger: CCCTTTGGTGTACCTGTCTCAGTTGACAAGGACGTG...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCGCCCCCACACCACTATaGTTCAGCATACTGATTGGG +
Preference number: 4 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGAPTPL*FSILIG
Trigger: CCCAATCAGTATGCTGAATCATAGTGGTGTGGGGGC...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCGCCCCCACACCACTATaGTTCAGCATACTGATTGGG +
Preference number: 4 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSAPTPL*FSILIG
Trigger: CCCAATCAGTATGCTGAATCATAGTGGTGTGGGGGC...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCCTTCCCGATCAGAAATaGGGCCAGAGACAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVLPDQK*GQRQQK
Trigger: TTTTTGCTGTCTCTGGCCTCATTTCTGATCGGGAAG...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACGGTCTGGTATCTGTCTaGATGGTGGAGGTCATCGGT +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHGLVSV*MVEVIG
Trigger: ACCGATGACCTCCACCATTCAGACAGATACCAGACC...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCGGTCTGGTATCTGTCTaGATGGTGGAGGTCATCGGT +
Preference number: 4 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGGLVSV*MVEVIG
Trigger: ACCGATGACCTCCACCATTCAGACAGATACCAGACC...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCCGATGTCGCTGTTCTTaGAGGTCTTCTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSRCRCS*RSSAWP
Trigger: AGGCCATGCAGAAGACCTGCAAGAACAGCGACATCG...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGACATCAGTGCTGGGGATaGCAGAGGGTTGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGHQCWG*QRVGKV
Trigger: TACCTTCCCAACCCTCTGGCATCCCCAGCACTGATG...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTTGCCAGGACCATCAGTaGTGGGGATGCCAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCCQDHQ*WGCQRV
Trigger: AACCCTCTGGCATCCCCAGCACTGATGGTCCTGGCA...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTTTGGTGAAAGGAATATaGACGTCCTTGTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPLVKGI*TSLSTE
Trigger: CTCAGTTGACAAGGACGTGCATATTCCTTTCACCAA...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGAGTTCCTGCTCCATATaGTCCTGCAGCTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQSSCSI*SCSSLG
Trigger: GCCCAGTGAGCTGCAGGAGCATATGGAGCAGGAACT...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGAGCTGCTCCAGTTCCTaGTCCATATGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKSCSSS*SICSCS
Trigger: GCTGCAGGAGCATATGGAGCAGGAACTGGAGCAGCT...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGCAGTTGGGCTAGCTaGTCCAGTTCCTGCTCCATA +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKGSWAS*SSSCSI
Trigger: TATGGAGCAGGAACTGGAGCAGCTAGCCCAACTGCC...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCCTTCAGTCTGGTGTTTaGATGTCTGTCTGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVLQSGV*MSVCPS
Trigger: AGACGGACAGACAGACATGCAAACACCAGACTGAAG...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGCTTCCAGGAGAGTGGTaGCCCGTATCCGCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWLPGEW*PVSASV
Trigger: GACAGAAGCGGATACGGGCCACCACTCTCCTGGAAG...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACACCATTGCTGGTGGATaGCATCTCATCACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHTIAGG*HLITGP
Trigger: TGGGCCAGTGATGAGATGCCATCCACCAGCAATGGT...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGAGCAGGCGGAGAGTGTaGTGCATGAAAAGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWSRRRV*CMKSPG
Trigger: CCCGGGACTTTTCATGCACCACACTCTCCGCCTGCT...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCGGCCAACCAGCACTTTaGGTCAGGGCAGGGAATATT +
Preference number: 4 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGGQPAL*VRAGNI
Trigger: AATATTCCCTGCCCTGACCCAAAGTGCTGGTTGGCC...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCGGAGTCTCTTTCTGTaGCCGGCGTTACGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQRSLFL*PALRKK
Trigger: CTTCTTGCGTAACGCCGGCCACAGAAAGAGACTCCG...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCTACACCAAAGGGTCGTaGCTGCTGACAAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSYTKGS*LLTRDG
Trigger: TCCATCCCTTGTCAGCAGCCACGACCCTTTGGTGTA...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAATTGGCAAAAGTGCCTaGCACCCCACCTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGIGKSA*HPTLPM
Trigger: CATCGGCAAGGTGGGGTGCCAGGCACTTTTGCCAAT...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGATCTGAGAAGCGCAAGTaGGGAGACTCTGTGTCATGG +
Preference number: 4 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGSEKRK*GDSVSW
Trigger: CCATGACACAGAGTCTCCCCACTTGCGCTTCTCAGA...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGGCAGATGGGGCAAATTaGGGCCTGGCTGTCGAACAA +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQADGAN*GLAVEQ
Trigger: TTGTTCGACAGCCAGGCCCCAATTTGCCCCATCTGC...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAGCAGATGGGGCAAATTaGGGCCTGGCTGTCGAACAA +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGADGAN*GLAVEQ
Trigger: TTGTTCGACAGCCAGGCCCCAATTTGCCCCATCTGC...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGGTGCCTGGAGCCATaGCATCCTTCAGAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKGCLEP*HPSEGN
Trigger: ATTCCCTTCTGAAGGATGCCATGGCTCCAGGCACCC...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATAGCCGTGGAAATTCCTTaGGAGAACGGTCGCACTTTT +
Preference number: 4 (lower is better)
Translates to: KERIMSLGACAPCLGEEIAVEIP*ENGRTF
Trigger: AAAAGTGCGACCGTTCTCCCAAGGAATTTCCACGGC...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGAGTTGGGAAGGTAGGATaGGTTCTCCATCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGVGKVG*VLHLEG
Trigger: GCCTTCAAGATGGAGAACTCATCCTACCTTCCCAAC...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGACACGTCCTTGTCAACTaGGACAGGTACACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGHVLVN*DRYTKG
Trigger: CCCTTTGGTGTACCTGTCTCAGTTGACAAGGACGTG...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCATCCTCTGGGCTAGATaGGGCTTCCCGATCAGAAAT +
Preference number: 4 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGILWAR*GFPIRN
Trigger: ATTTCTGATCGGGAAGCCTCATCTAGCCCAGAGGAT...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCACTCTTAGAAAGGCAATaGTCCACATGCCTACTCATC +
Preference number: 4 (lower is better)
Translates to: PECQCLRVSCLYLGSHLPLLERQ*STCLLI
Trigger: GATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGAG...TGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR GCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGACGATGTCGCTGTTCTTaGAGGTCTTCTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGRCRCS*RSSAWP
Trigger: AGGCCATGCAGAAGACCTGCAAGAACAGCGACATCG...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGCGATGTCGCTGTTCTTaGAGGTCTTCTGCATGGCCT +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKRCRCS*RSSAWP
Trigger: AGGCCATGCAGAAGACCTGCAAGAACAGCGACATCG...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGATCCCCACGAGATAGCTaGCGTTCAAGTTCTCTGACC +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGSPRDS*RSSSLT
Trigger: GGTCAGAGAACTTGAACGGCAGCTATCTCGTGGGGA...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTCATCAGTGCTGGGGATaGCAGAGGGTTGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCHQCWG*QRVGKV
Trigger: TACCTTCCCAACCCTCTGGCATCCCCAGCACTGATG...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGAGTTCCTGCTCCATATaGTCCTGCAGCTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWSSCSI*SCSSLG
Trigger: GCCCAGTGAGCTGCAGGAGCATATGGAGCAGGAACT...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGAGCTGCTCCAGTTCCTaGTCCATATGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWSCSSS*SICSCS
Trigger: GCTGCAGGAGCATATGGAGCAGGAACTGGAGCAGCT...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACCTGGCTCCAGAGTCCTaGGTGTGTAAATGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHLAPES*VCKCVC
Trigger: ACACACACATTTACACACGCAGGACTCTGGAGCCAG...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTAGCCTCTGTGTATTGTaGCTTCCCATACTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGSLCVL*LPILQS
Trigger: ACTCTGGAGTATGGGAAGCCACAATACACAGAGGCT...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATATGCTTTCACCATTGCTaGTGGATGGCATCTCATCAC +
Preference number: 4 (lower is better)
Translates to: KERIMSLGACAPCLGEEICFHHC*WMASHH
Trigger: GTGATGAGATGCCATCCACCAGCAATGGTGAAAGCA...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTGCTTTCACCATTGCTaGTGGATGGCATCTCATCAC +
Preference number: 4 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGCFHHC*WMASHH
Trigger: GTGATGAGATGCCATCCACCAGCAATGGTGAAAGCA...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACTGTTCGCGAGCTGCCTaGGATTGCATGTACAGATCA +
Preference number: 4 (lower is better)
Translates to: WEKKYTPLNTEHMGEGRDCSRAA*DCMYRS
Trigger: TGATCTGTACATGCAATCCCAGGCAGCTCGCGAACA...GTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCGGCTGGCCTCAGCCGTaGATGCCAGGACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVGWPQP*MPGPSV
Trigger: CACTGATGGTCCTGGCATCCACGGCTGAGGCCAGCC...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTGGGGGAAATCACGATTaGCAAAAGTGCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCGGNHD*QKCLAP
Trigger: GGGTGCCAGGCACTTTTGCCAATCGTGATTTCCCCC...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCGCAGGACCTGGCAGATaGGGCAAATTGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVAGPGR*GKLGPG
Trigger: GCCAGGCCCCAATTTGCCCCATCTGCCAGGTCCTGC...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACTGGTATCTGTCTGAATaGTGGAGGTCATCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHWYLSE*WRSSVA
Trigger: TGCCACCGATGACCTCCACCATTCAGACAGATACCA...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGCGTGCCAACACTGGATaGACGTTAGGGGCATCGAGT +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWRANTG*TLGASS
Trigger: ACTCGATGCCCCTAACGTCCATCCAGTGTTGGCACG...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTTGCACGTGCCAACACTaGATGGACGTTAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCCTCQH*MDVRGI
Trigger: GATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCA...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCAGGTACCCCAAGAGGTaGATGGGCCGAGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVRYPKR*MGRAPS
Trigger: GCTGGGAGCTCGGCCCATCCACCTCTTGGGGTACCT...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR CAA 72 bp CGCTTCTGTCCACACCACTCATACTCCTCAAAGCGGTaGTTGTTCTCATGCTCGATGTCCACAGCATCATCC +
Preference number: 4 (lower is better)
Translates to: RFCPHHSYSSKR*LFSCSMSTASS
Trigger: GGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR TCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAGTTGGGAAGGTAGGATaGGTTCTCCATCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGVGKVG*VLHLEG
Trigger: GCCTTCAAGATGGAGAACTCATCCTACCTTCCCAAC...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGATTTGTGTTCGCGAGCTaGCTGGGATTGCATGTACAG +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGFVFAS*LGLHVQ
Trigger: CTGTACATGCAATCCCAGGCAGCTCGCGAACACAAA...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCCAAAGTCATATTCCTTaGCATCTGCATCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVQSHIP*HLHLRS
Trigger: GCTTCTCAGATGCAGATGGCAAGGAATATGACTTTG...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTGTCGAACAATGCCGCTaGTTTCTTCTTACATCTGTC +
Preference number: 4 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGVEQCR*FLLTSV
Trigger: GACAGATGTAAGAAGAAAGCAGCGGCATTGTTCGAC...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACCTGGCTGTCGAACAATaGCGCTGCTTTCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHLAVEQ*RCFLLT
Trigger: TGTAAGAAGAAAGCAGCGGCATTGTTCGACAGCCAG...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AGCATCATCCTCAGCCATGCAGGAGCCTTCCCTCTTAGAAAGGCAATGCTCCACTCGTCACTCCTAGCTTaGAGCCTCACAATTCCATTT +
Preference number: 4 (lower is better)
Translates to: SIILSHAGAFPLRKAMLHSSLLA*SLTIPF
Trigger: AAATGGAATTGTGAGGCTGCAAGCTAGGAGTGACGA...GTGGAGCATTGCCTTTCTAAGAGGGAAGGCTCCTGCATGGCTGAGGATGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGTCAGAGCCTCAAACGTaGTCACAGCTGAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKSEPQT*SQLNLR
Trigger: CCGAAGATTCAGCTGTGACCACGTTTGAGGCTCTGA...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGATCAAGAGACTCAGTTaGCGTGAGAGAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGIKRLS*RERRSS
Trigger: ACTGCTCCTTCTCTCACGCCAACTGAGTCTCTTGAT...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACATCAAGAGACTCAGTTaGCGTGAGAGAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHIKRLS*RERRSS
Trigger: ACTGCTCCTTCTCTCACGCCAACTGAGTCTCTTGAT...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCAGGACCATCAGTGCTaGGGATGCCAGAGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVQDHQC*GCQRVG
Trigger: CCCAACCCTCTGGCATCCCCAGCACTGATGGTCCTG...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAACCCCACCTTGCCGATaGTACATAGAGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGTPPCR*YIEAKV
Trigger: TACCTTTGCCTCTATGTACCATCGGCAAGGTGGGGT...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGAGGAGACTCTGTGTCATaGCAGTTCTTAAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGGDSVS*QFLSRL
Trigger: CAAGCGACTTAAGAACTGCCATGACACAGAGTCTCC...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCAACAGGAGGGACTTTaGGGTGCCTGGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVQQEGL*GAWSHG
Trigger: GCCATGGCTCCAGGCACCCCAAAGTCCCTCCTGTTG...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGTGGTATCTGTCTGAATaGTGGAGGTCATCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQWYLSE*WRSSVA
Trigger: TGCCACCGATGACCTCCACCATTCAGACAGATACCA...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCGAGGGCAGAGCTTCTTaGCACCCAGGGTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCEGRAS*HPGSAA
Trigger: GGCTGCGGACCCTGGGTGCCAAGAAGCTCTGCCCTC...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CATGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAGCCGTGGAAATTCCTTaGGAGAACGGTCGCACTTTT +
Preference number: 4 (lower is better)
Translates to: HVWEKKYTPLNTEHMGEGAVEIP*ENGRTF
Trigger: AAAAGTGCGACCGTTCTCCCAAGGAATTTCCACGGC...TCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGAAACGTGGTCACAGCTaGATCTTCGGTGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGKRGHS*IFGDFL
Trigger: GAGAAAATCACCGAAGATTCAGCTGTGACCACGTTT...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGTATAGGAACCGTTGGTaGAAGGAATATGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGYRNRW*KEYARP
Trigger: AGGACGTGCATATTCCTTTCACCAACGGTTCCTATA...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACACAACCCCCACCTCCCTaGCCCACCCTGGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITQPPPP*PTLGTE
Trigger: CTCTGTTCCCAGGGTGGGGCAGGGAGGTGGGGGTTG...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCTTCAGTCTGGTGTTTaGATGTCTGTCTGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQLQSGV*MSVCPS
Trigger: AGACGGACAGACAGACATGCAAACACCAGACTGAAG...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGATCAAGAGACTCAGTTaGCGTGAGAGAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQIKRLS*RERRSS
Trigger: ACTGCTCCTTCTCTCACGCCAACTGAGTCTCTTGAT...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCGGCTGGCCTCAGCCGTaGATGCCAGGACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCGWPQP*MPGPSV
Trigger: CACTGATGGTCCTGGCATCCACGGCTGAGGCCAGCC...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCCCTGGGAACAGAGCTaGAACAGGTATGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVPWEQS*NRYGPQ
Trigger: TTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAGGG...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCACATGTGCTTCAGTCTaGTGTTTGCATGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSTCASV*CLHVCL
Trigger: CAGACAGACATGCAAACACCAGACTGAAGCACATGT...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR CAA 72 bp TACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTaGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGC +
Preference number: 4 (lower is better)
Translates to: YTVYITCASVWC*HVCLSVCQYGG
Trigger: GCCCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
3UTR CAA 72 bp TTCTGTCCACACCACTCATACTCCTCAAAGCGGTTGTaGTTCTCATGCTCGATGTCCACAGCATCATCCTCA +
Preference number: 4 (lower is better)
Translates to: FCPHHSYSSKRL*FSCSMSTASSS
Trigger: TGAGGATGATGCTGTGGACATCGAGCATGAGAACAACAACCGCTTTGAGGAGTATGAGTGGTGTGGACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR TCA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTATGATTCAGCATACTaGTTGGGGTGCAATCTAGAT +
Preference number: 4 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGYDSAY*LGCNLD
Trigger: ATCTAGATTGCACCCCAATCAGTATGCTGAATCATA...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATATATGATTCAGCATACTaGTTGGGGTGCAATCTAGAT +
Preference number: 4 (lower is better)
Translates to: KERIMSLGACAPCLGEEIYDSAY*LGCNLD
Trigger: ATCTAGATTGCACCCCAATCAGTATGCTGAATCATA...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGAGAAATATACACCACTaGACACCGAGCACATGGGAG +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWRNIHH*TPSTWE
Trigger: CTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCT...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCATCAGTGCTGGGGATaGCAGAGGGTTGGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVHQCWG*QRVGKV
Trigger: TACCTTCCCAACCCTCTGGCATCCCCAGCACTGATG...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGTTGGTGAAAGGAATATaGACGTCCTTGTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGLVKGI*TSLSTE
Trigger: CTCAGTTGACAAGGACGTGCATATTCCTTTCACCAA...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACCAAAGTCATATTCCTTaGCATCTGCATCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHQSHIP*HLHLRS
Trigger: GCTTCTCAGATGCAGATGGCAAGGAATATGACTTTG...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGCTGGCTGTCGAACAATaGCGCTGCTTTCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWLAVEQ*RCFLLT
Trigger: TGTAAGAAGAAAGCAGCGGCATTGTTCGACAGCCAG...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATAGGTCTATATTACATGTaGTTCAGTCTGGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KERIMSLGACAPCLGEEIGLYYM*FSLVFA
Trigger: TGCAAACACCAGACTGAAGCACATGTAATATAGACC...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTTTCCCTCCTAAGACTTaGCGTGGAAATTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCFPPKT*RGNSLG
Trigger: TCCCAAGGAATTTCCACGGCAAGTCTTAGGAGGGAA...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGACCGTGGAAATTCCTTaGGAGAACGGTCGCACTTTT +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWTVEIP*ENGRTF
Trigger: AAAAGTGCGACCGTTCTCCCAAGGAATTTCCACGGT...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355387.6
CDS-3UTR CCA 90 bp CACAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGGCTGGCCTCAGCCGTaGATGCCAGGACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: HNIVNIHGLYYMCFSLVFGWPQP*MPGPSV
Trigger: CACTGATGGTCCTGGCATCCACGGCTGAGGCCAGCC...AAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGAGACTCTGTGTCATaGCAGTTCTTAAGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWGDSVS*QFLSRL
Trigger: CAAGCGACTTAAGAACTGCCATGACACAGAGTCTCC...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCGGCCTCAGCAGGACCTaGCAGATGGGGCAAATTGGG +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCGLSRT*QMGQIG
Trigger: CCCAATTTGCCCCATCTGCCAGGTCCTGCTGAGGCC...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTGCCAACACTGGATaGACGTTAGGGGCATCGAGT +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVRANTG*TLGASS
Trigger: ACTCGATGCCCCTAACGTCCATCCAGTGTTGGCACG...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGAAACGTGGTCACAGCTaGATCTTCGGTGATTTTCTC +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWKRGHS*IFGDFL
Trigger: GAGAAAATCACCGAAGATTCAGCTGTGACCACGTTT...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCGCCGTTCAAGTTCTCTaGCCCGAGCCTTCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCAVQVL*PEPSEP
Trigger: AGGCTCTGAAGGCTCGGGTCAGAGAACTTGAACGGC...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGTATGATTCAGCATACTaGTTGGGGTGCAATCTAGAT +
Preference number: 4 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGYDSAY*LGCNLD
Trigger: ATCTAGATTGCACCCCAATCAGTATGCTGAATCATA...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCACGAGTCCATGCAGATaGGGCATTTGTAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVTSPCR*GICNGP
Trigger: GGGACCGTTACAAATGCCTCATCTGCATGGACTCGT...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCTTCTTGCAGGTCTTCTaGATGGCCTCCTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVFLQVF*MASCLL
Trigger: CAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAA...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCCACGATTGGCAAAAGTaGCTGGCACCCCACCTTGCC +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCHDWQK*LAPHLA
Trigger: GGCAAGGTGGGGTGCCAGGCACTTTTGCCAATCGTG...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGTCGAACAATGCCGCTaGTTTCTTCTTACATCTGTC +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWVEQCR*FLLTSV
Trigger: GACAGATGTAAGAAGAAAGCAGCGGCATTGTTCGAC...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCTGCTCCATATGCTCCTaGAGCTCACTGGGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCCSICS*SSLGLS
Trigger: GCTGAGGCCCAGTGAGCTGCAGGAGCATATGGAGCA...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACGGTCTATATTACATGTaGTTCAGTCTGGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHGLYYM*FSLVFA
Trigger: TGCAAACACCAGACTGAAGCACATGTAATATAGACC...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCGTCGGGTCTGCCGGTTaGCTCGTACTCGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSVGSAG*LVLAER
Trigger: CCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGAC...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACATGGAAGCATCACGGCTaGCCTCAGCCGTGGATGCCA +
Preference number: 4 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITWKHHG*PQPWMP
Trigger: TGGCATCCACGGCTGAGGCCAGCCGTGATGCTTCCA...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCGCTGCTGACAAGGGATaGAAGCATCACGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCAADKG*KHHGWP
Trigger: AGGCCAGCCGTGATGCTTCCATCCCTTGTCAGCAGC...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCCAACAGGAGGGACTTTaGGGTGCCTGGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSQQEGL*GAWSHG
Trigger: GCCATGGCTCCAGGCACCCCAAAGTCCCTCCTGTTG...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCCCAGCAGGTAGTGCCTaGGCCACAGCCTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSPAGSA*ATASTL
Trigger: CAGAGTAGAGGCTGTGGCCCAGGCACTACCTGCTGG...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCCCCCCAAACCATAGGTaGGAGCCAGCAGGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSPPNHR*EPAGSA
Trigger: GGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGG...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTACATGTGCTTCAGTCTaGTGTTTGCATGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCTCASV*CLHVCL
Trigger: CAGACAGACATGCAAACACCAGACTGAAGCACATGT...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCGTTCTCAGCAGAGGCTaGGTGGCCAGGAGCACTGTC +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSVLSRG*VARSTV
Trigger: GACAGTGCTCCTGGCCACCCAGCCTCTGCTGAGAAC...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCGTTGGGAAGGTAGGATaGGTTCTCCATCTTGAAGGC +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVVGKVG*VLHLEG
Trigger: GCCTTCAAGATGGAGAACTCATCCTACCTTCCCAAC...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCATCCTCTGGGCTAGATaGGGCTTCCCGATCAGAAAT +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVILWAR*GFPIRN
Trigger: ATTTCTGATCGGGAAGCCTCATCTAGCCCAGAGGAT...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCGCATGGCCTCCTGCTTaGTGCTTTCACCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCAWPPA*CFHHCW
Trigger: CCAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGC...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CACAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTCACGATTGGCAAAAGTaGCTGGCACCCCACCTTGCC +
Preference number: 4 (lower is better)
Translates to: HNIVNIHGLYYMCFSLVFHDWQK*LAPHLA
Trigger: GGCAAGGTGGGGTGCCAGGCACTTTTGCCAATCGTG...AAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGCATGTTTGAGTATGTaGATGTATGTACATGGGGAA +
Preference number: 4 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKACLSM*MYVHGE
Trigger: TTCCCCATGTACATACATGCACATACTCAAACATGC...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTGCTGCTGACAAGGGATaGAAGCATCACGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: IVNIHGLYYMCFSLVFACAADKG*KHHGWP
Trigger: AGGCCAGCCGTGATGCTTCCATCCCTTGTCAGCAGC...ACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCTGCACGTGCCAACACTaGATGGACGTTAGGGGCATC +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCCTCQH*MDVRGI
Trigger: GATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCA...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCCCCTGGGAACAGAGCTaGAACAGGTATGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSPWEQS*NRYGPQ
Trigger: TTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAGGG...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACACCCTGGGAACAGAGCTaGAACAGGTATGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITPWEQS*NRYGPQ
Trigger: TTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAGGG...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACAAAGGGTCGTGGCTGCTaGCAAGGGATGGAAGCATCA +
Preference number: 4 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITKGRGC*QGMEAS
Trigger: TGATGCTTCCATCCCTTGTCAGCAGCCACGACCCTT...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCCTTGCCATCTGCATCTaGGAAGCGCAAGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSLAICI*EAQVGR
Trigger: TCTCCCCACTTGCGCTTCTCAGATGCAGATGGCAAG...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CACAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTCTTGCCATCTGCATCTaGGAAGCGCAAGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: HNIVNIHGLYYMCFSLVFLAICI*EAQVGR
Trigger: TCTCCCCACTTGCGCTTCTCAGATGCAGATGGCAAG...AAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCACGAGTCCATGCAGATaGGGCATTTGTAACGGTCCC +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCTSPCR*GICNGP
Trigger: GGGACCGTTACAAATGCCTCATCTGCATGGACTCGT...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACAGTGATCGTGTTGCACTaGGGGCAGAGCTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITVIVLH*GQSFLA
Trigger: TGCCAAGAAGCTCTGCCCTCAGTGCAACACGATCAC...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCAGAAATATACACCACTaGACACCGAGCACATGGGAG +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVRNIHH*TPSTWE
Trigger: CTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCT...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCGGCAGTTGGGCTAGCTaGTCCAGTTCCTGCTCCATA +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSGSWAS*SSSCSI
Trigger: TATGGAGCAGGAACTGGAGCAGCTAGCCCAACTGCC...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCAGGAGCCTTCCCTCTaGCCTTCATCTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IVNIHGLYYMCFSLVFACQEPSL*PSSCFL
Trigger: GAGGAAGCAAGATGAAGGGCAGAGGGAAGGCTCCTG...ACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGCATGTTTGAGTATGTaGATGTATGTACATGGGGAA +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWACLSM*MYVHGE
Trigger: TTCCCCATGTACATACATGCACATACTCAAACATGC...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGTCTATATTACATGTaGTTCAGTCTGGTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWGLYYM*FSLVFA
Trigger: TGCAAACACCAGACTGAAGCACATGTAATATAGACC...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCTTCCCTCCTAAGACTTaGCGTGGAAATTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVFPPKT*RGNSLG
Trigger: TCCCAAGGAATTTCCACGGCAAGTCTTAGGAGGGAA...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CACAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCAGATGGGGCAAATTaGGGCCTGGCTGTCGAACAA +
Preference number: 4 (lower is better)
Translates to: HNIVNIHGLYYMCFSLVFADGAN*GLAVEQ
Trigger: TTGTTCGACAGCCAGGCCCCAATTTGCCCCATCTGC...AAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCGGGTGCCTGGAGCCATaGCATCCTTCAGAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSGCLEP*HPSEGN
Trigger: ATTCCCTTCTGAAGGATGCCATGGCTCCAGGCACCC...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCTATCTGTCTGAATGGTaGAGGTCATCGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVYLSEW*RSSVAD
Trigger: ATCTGCCACCGATGACCTCCACCATTCAGACAGATA...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACAGTCCGTCTGTCAGTATaGGGGCTGGATCTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITVRLSV*GLDLRS
Trigger: GCTCCTAAGATCCAGCCCCCATACTGACAGACGGAC...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTGGTCTGGTATCTGTCTaGATGGTGGAGGTCATCGGT +
Preference number: 4 (lower is better)
Translates to: IVNIHGLYYMCFSLVFACGLVSV*MVEVIG
Trigger: ACCGATGACCTCCACCATTCAGACAGATACCAGACC...ACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCTCAGAGCCTCAAACGTaGTCACAGCTGAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCSEPQT*SQLNLR
Trigger: CCGAAGATTCAGCTGTGACCACGTTTGAGGCTCTGA...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACAGGCCAACCAGCACTTTaGGTCAGGGCAGGGAATATT +
Preference number: 4 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITGQPAL*VRAGNI
Trigger: AATATTCCCTGCCCTGACCCAAAGTGCTGGTTGGCC...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTATGAGTTCTCCATCTTaGAGGCTGCCCGGTGTAAGT +
Preference number: 4 (lower is better)
Translates to: IVNIHGLYYMCFSLVFACMSSPS*RLPGVS
Trigger: ACTTACACCGGGCAGCCTTCAAGATGGAGAACTCAT...ACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCCTTCCCGATCAGAAATaGGGCCAGAGACAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCLPDQK*GQRQQK
Trigger: TTTTTGCTGTCTCTGGCCTCATTTCTGATCGGGAAG...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACAATCCTCTGGGCTAGATaGGGCTTCCCGATCAGAAAT +
Preference number: 4 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITILWAR*GFPIRN
Trigger: ATTTCTGATCGGGAAGCCTCATCTAGCCCAGAGGAT...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CACAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTACTCTCCTTCCCTCTTaGTGGAAGCAGACAACAGGA +
Preference number: 4 (lower is better)
Translates to: HNIVNIHGLYYMCFSLVFTLLPS*WKQTTG
Trigger: TCCTGTTGTCTGCTTCCATCAAGAGGGAAGGAGAGT...AAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTACTCTCCTTCCCTCTTaGTGGAAGCAGACAACAGGA +
Preference number: 4 (lower is better)
Translates to: IVNIHGLYYMCFSLVFACTLLPS*WKQTTG
Trigger: TCCTGTTGTCTGCTTCCATCAAGAGGGAAGGAGAGT...ACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp CACAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTTTTGTGTTCGCGAGCTaGCTGGGATTGCATGTACAG +
Preference number: 4 (lower is better)
Translates to: HNIVNIHGLYYMCFSLVFFVFAS*LGLHVQ
Trigger: CTGTACATGCAATCCCAGGCAGCTCGCGAACACAAA...AAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTGTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp ATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTTGTTCGCGAGCTGCCTaGGATTGCATGTACAGATCA +
Preference number: 4 (lower is better)
Translates to: IVNIHGLYYMCFSLVFACCSRAA*DCMYRS
Trigger: TGATCTGTACATGCAATCCCAGGCAGCTCGCGAACA...ACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCTCCCTCCTAAGACCGTaGAAATTCCTTGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSSLLRP*KFLGRT
Trigger: CGTTCTCCCAAGGAATTTCCACGGTCTTAGGAGGGA...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355387.6
CDS-3UTR CCA 90 bp ATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTTGGTATCTGTCTGAATaGTGGAGGTCATCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IVNIHGLYYMCFSLVFACWYLSE*WRSSVA
Trigger: TGCCACCGATGACCTCCACCATTCAGACAGATACCA...ACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCTATAGGAACCGTTGGTaGAAGGAATATGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCYRNRW*KEYARP
Trigger: AGGACGTGCATATTCCTTTCACCAACGGTTCCTATA...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR TCA 90 bp ATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTTCCCGATCAGAAATaGGGCCAGAGACAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: IVNIHGLYYMCFSLVFACLPDQK*GQRQQK
Trigger: TTTTTGCTGTCTCTGGCCTCATTTCTGATCGGGAAG...ACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACACGGTTGTTGTTCTCATaGTCGATGTCCACAGCATCA +
Preference number: 4 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITRLLFS*SMSTAS
Trigger: TGATGCTGTGGACATCGAGCATGAGAACAACAACCG...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACAAGCCTCTGTGTATTGTaGCTTCCCATACTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITSLCVL*LPILQS
Trigger: ACTCTGGAGTATGGGAAGCCACAATACACAGAGGCT...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCTTTCACCATTGCTGGTaGATGGCATCTCATCACTGG +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSFHHCW*MASHHW
Trigger: CCAGTGATGAGATGCCATCCACCAGCAATGGTGAAA...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR GCA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCCAAAGTCATATTCCTTaGCATCTGCATCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSQSHIP*HLHLRS
Trigger: GCTTCTCAGATGCAGATGGCAAGGAATATGACTTTG...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp ACATCTGGGCAGTGCCCGGAGCGGCCTCCCATTCCCCGACCCCCATaGCACCTCACCAGGGTCCGCAGCCAGCACTCCTCGCAGTGCACG +
Preference number: 5 (lower is better)
Translates to: TSGQCPERPPIPRPP*HLTRVRSQHSSQCT
Trigger: CGTGCACTGCGAGGAGTGCTGGCTGCGGACCCTGGTGAGGTGGCATGGGGGTCGGGGAATGGGAGGCCGCTCCGGGCACTGCCCAGATGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS GCA 90 bp GCTCCAAGCGGCGGCGGCGGCCATGTTGGCCCTAATCACGTGATCTaGCGCCGTCGCGCGCTGGGGGTGAAAGTTCACAATGCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: APSGGGGHVGPNHVI*RRRALGVKVHNAAG
Trigger: CCCCGCCGCATTGTGAACTTTCACCCCCAGCGCGCGACGGCGGCAGATCACGTGATTAGGGCCAACATGGCCGCCGCCGCCGCTTGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335497.11
ENST00000440132.2
CDS GCA 90 bp TCCCTCCCACCGCCCGTGAAGCCTACCCACCCAATCTTTAGCGGCTaGGAAGTCCTTCCACCCCACTCCACGACCCCTCCCGCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: SLPPPVKPTHPIFSG*EVLPPHSTTPPAAG
Trigger: CCCCGCAGCGGGAGGGGTCGTGGAGTGGGGTGGAAGGACTTCGCAGCCGCTAAAGATTGGGTGGGTAGGCTTCACGGGCGGTGGGAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335497.11
ENST00000440132.2
CDS GCA 90 bp TCACGTGATCTGCCGCCGTCGCGCGCTGGGGGTGAAAGTTCACAATaGGGCGGGGGCGGCCGGACAGAGACCAGGAAGCTGCCGTTTGTA +
Preference number: 5 (lower is better)
Translates to: SRDLPPSRAGGESSQ*GGGGRTETRKLPFV
Trigger: TACAAACGGCAGCTTCCTGGTCTCTGTCCGGCCGCCCCCGCCGCATTGTGAACTTTCACCCCCAGCGCGCGACGGCGGCAGATCACGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335497.11
ENST00000440132.2
CDS GCA 90 bp GGTCGCACTTTTCAGGACACGGAGGGAAGCAGGCGGAGAGTGTGGTaGATGAAAAGTCCCGGGTTCGCAGAGCCGGCGGAGGCAGCGGCG +
Preference number: 5 (lower is better)
Translates to: GRTFQDTEGSRRRVW*MKSPGFAEPAEAAA
Trigger: CGCCGCTGCCTCCGCCGGCTCTGCGAACCCGGGACTTTTCATGCACCACACTCTCCGCCTGCTTCCCTCCGTGTCCTGAAAAGTGCGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp CCCCCATGCCACCTCACCAGGGTCCGCAGCCAGCACTCCTCGCAGTaGACGTGCCAACACTGGATGGACGTTAGGGGCATCGAGTACGAG +
Preference number: 5 (lower is better)
Translates to: PPCHLTRVRSQHSSQ*TCQHWMDVRGIEYE
Trigger: CTCGTACTCGATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGCTGCGGACCCTGGTGAGGTGGCATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS TCA 90 bp GAGGAGGAGTTAGCACCGGGCAGGCTCTTGAAGCCCTCCCCCAGGTaGGCTTGCTTCTCATGGCCACTCACCACCCCTCCTCACCTGGTA +
Preference number: 5 (lower is better)
Translates to: EEELAPGRLLKPSPR*ACFSWPLTTPPHLV
Trigger: TACCAGGTGAGGAGGGGTGGTGAGTGGCCATGAGAAGCAAGCTCACCTGGGGGAGGGCTTCAAGAGCCTGCCCGGTGCTAACTCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496262.1
CDS GCA 90 bp TGCCACCTCACCAGGGTCCGCAGCCAGCACTCCTCGCAGTGCACGTaGCAACACTGGATGGACGTTAGGGGCATCGAGTACGAGTCCATG +
Preference number: 5 (lower is better)
Translates to: CHLTRVRSQHSSQCT*QHWMDVRGIEYESM
Trigger: CATGGACTCGTACTCGATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGCTGCGGACCCTGGTGAGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS-3UTR CAA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTAGTCGGGTCTGCCGGTaGGCTCGTACTCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: GHHRRERGRYPKRWMGRASRVCR*ARTRRK
Trigger: CTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACT...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp CTGCTGACAAGGGATGGAAGCATCACGGCTGGCCTCAGCCGTGGATaGCAGGACCATCAGTGCTGGGGATGCCAGAGGGTTGGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: LLTRDGSITAGLSRG*QDHQCWGCQRVGKV
Trigger: TACCTTCCCAACCCTCTGGCATCCCCAGCACTGATGGTCCTGGCATCCACGGCTGAGGCCAGCCGTGATGCTTCCATCCCTTGTCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp TTCTTGGCACCCAGGGTCCGCAGCCAGCACTCCTCGCAGTGCACGTaGCAACACTGGATGGACGTTAGGGGCATCGAGTACGAGTCCATG +
Preference number: 5 (lower is better)
Translates to: FLAPRVRSQHSSQCT*QHWMDVRGIEYESM
Trigger: CATGGACTCGTACTCGATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGCTGCGGACCCTGGGTGCCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000474394.5
ENST00000475378.5
ENST00000484745.5
CDS-3UTR CAA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTCGGCTGGCCCCGGGTTaGTGTTCGCGAGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGRLAPG*CSRAAW
Trigger: CCAGGCAGCTCGCGAACACAAACCCGGGGCCAGCCG...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGACAACAGGAGGGACTTaGGGGTGCCTGGAGCCATGG +
Preference number: 5 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWTTGGT*GCLEPW
Trigger: CCATGGCTCCAGGCACCCCAAAGTCCCTCCTGTTGT...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp AGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCAACCAGCCTCGGCCTCTaGGCTTCCAGCAGATGGATA +
Preference number: 5 (lower is better)
Translates to: SLGLLASSRWIPSRGLAPTSLGL*ASSRWI
Trigger: TATCCATCTGCTGGAAGCCAAGAGGCCGAGGCTGGT...TGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS TCA 90 bp GAGAAGGAGCAGTGCTGCCTCTCAGCGCTGGATCTAATCAGTGAATaGGCCTCCACTCTCCCAGGGACTCGGAGACACACACACGCGCGC +
Preference number: 5 (lower is better)
Translates to: EKEQCCLSALDLISE*ASTLPGTRRHTHAR
Trigger: GCGCGCGTGTGTGTGTCTCCGAGTCCCTGGGAGAGTGGAGGCTCATTCACTGATTAGATCCAGCGCTGAGAGGCAGCACTGCTCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355387.6
CDS GCA 90 bp AGGGAATTCTTGCTCGAGGGCAGTTGGGCTAGCTGCTCCAGTTCCTaGTCCATATGCTCCTGCAGCTCACTGGGCCTCAGCAGGACCTGG +
Preference number: 5 (lower is better)
Translates to: REFLLEGSWASCSSS*SICSCSSLGLSRTW
Trigger: CCAGGTCCTGCTGAGGCCCAGTGAGCTGCAGGAGCATATGGAGCAGGAACTGGAGCAGCTAGCCCAACTGCCCTCGAGCAAGAATTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GCCTTCCCTCTTAGAAAGGCAATGCTCCACATGCCTACTCATCTCCTGCTCCGACCTGCCAGGGGGCGGTaGCACAGGGGACATACCTGC +
Preference number: 5 (lower is better)
Translates to: AFPLRKAMLHMPTHLLLRPARGR*HRGHTC
Trigger: GCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGG...TCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCCTTTCTAAGAGGGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CAA 90 bp ACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTCCTGCATGGCCTCCTGCTaGCTGCTTTCACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: TPQERERQVPQEVDGPSSCMASC*LLSPLL
Trigger: CAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCA...GGAGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTACGGCTGGCCCCGGGTTaGTGTTCGCGAGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVRLAPG*CSRAAW
Trigger: CCAGGCAGCTCGCGAACACAAACCCGGGGCCAGCCG...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp AGCCTCGGCCTCTTGGCTTCCAGCAGATGGATACCCAGCAGAGGCCTGGCACCACTACGTGTCAGCTGCTaGTACCTCGGAAGCCACCTT +
Preference number: 5 (lower is better)
Translates to: SLGLLASSRWIPSRGLAPLRVSC*YLGSHL
Trigger: AAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAG...TGGTGCCAGGCCTCTGCTGGGTATCCATCTGCTGGAAGCCAAGAGGCCGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS TCA 90 bp ACGTCCTTGTCAACTGAGACAGGTACACCAAAGGGTCGTGGCTGCTaGCAAGGGATGGAAGCATCACGGCTGGCCTCAGCCGTGGATGCC +
Preference number: 5 (lower is better)
Translates to: TSLSTETGTPKGRGC*QGMEASRLASAVDA
Trigger: GGCATCCACGGCTGAGGCCAGCCGTGATGCTTCCATCCCTTGTCAGCAGCCACGACCCTTTGGTGTACCTGTCTCAGTTGACAAGGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 90 bp CTCTGTGTCATGGCAGTTCTTAAGTCGCTTGGCCGGCGTAAAGGCTaGCTGATAGCTCTCCCGGTCCTCGGTGGAGGCAAAGGGCCGGAA +
Preference number: 5 (lower is better)
Translates to: LCVMAVLKSLGRRKG*LIALPVLGGGKGPE
Trigger: TTCCGGCCCTTTGCCTCCACCGAGGACCGGGAGAGCTATCAGTCAGCCTTTACGCCGGCCAAGCGACTTAAGAACTGCCATGACACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTTGCACAGGGGTCCTCAAAGCGGTTGTaGTTCTCATGCTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: HMPTHLLLRSCQGAVAQGSSKRL*FSCSMS
Trigger: GGACATCGAGCATGAGAACAACAACCGCTTTGAGGA...CCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS TCA 90 bp GTGAGAGAAGGAGCAGTGCTGCCTCTCAGCGCTGGATCTAATCAGTaGATGAGCCTCCACTCTCCCAGGGACTCGGAGACACACACACGC +
Preference number: 5 (lower is better)
Translates to: VREGAVLPLSAGSNQ*MSLHSPRDSETHTR
Trigger: GCGTGTGTGTGTCTCCGAGTCCCTGGGAGAGTGGAGGCTCATTCACTGATTAGATCCAGCGCTGAGAGGCAGCACTGCTCCTTCTCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355387.6
CDS TCA 90 bp TGGCAGATGAGTGGGGTGATGCCGTTGGAGACTCTCCTTCCCTCTTaGTGGAAGCAGACAACAGGAGGGACTTTGGGGTGCCTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: WQMSGVMPLETLLPS*WKQTTGGTLGCLEP
Trigger: TGGCTCCAGGCACCCCAAAGTCCCTCCTGTTGTCTGCTTCCATCAAGAGGGAAGGAGAGTCTCCAACGGCATCACCCCACTCATCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000496262.1
CDS TCA 90 bp CATAGAAGGAAGCGGTGCTGCTGCCCCCTCTGCCTCCGCCGTAGCTaGGAGCCAAACCCCTTTGCAAATGACTGCCACAAAGAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: HRRKRCCCPLCLRRS*EPNPFANDCHKESC
Trigger: GCAGCTTTCTTTGTGGCAGTCATTTGCAAAGGGGTTTGGCTCTCAGCTACGGCGGAGGCAGAGGGGGCAGCAGCACCGCTTCCTTCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487332.1
CDS GCA 90 bp AGAAAGGCAATGCTCCACATGCCTACTCATCTCCTGCTCCGATCCTaGCAGGGGGCGGTTGCACAGGGGACATACCTGCCCTTCATCTTG +
Preference number: 5 (lower is better)
Translates to: RKAMLHMPTHLLLRS*QGAVAQGTYLPFIL
Trigger: CAAGATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGAGCATTGCCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335497.11
ENST00000453863.5
ENST00000471494.5
ENST00000488865.2
ENST00000497469.5
CDS GCA 90 bp AGTAGGCGGCTGGCCCCGGGTTTGTGTTCGCGAGCTGCCTGGGATTaGATGTACAGATCAAGAGACTCAGTTGGCGTGAGAGAAGGAGCA +
Preference number: 5 (lower is better)
Translates to: SRRLAPGLCSRAAWD*MYRSRDSVGVREGA
Trigger: TGCTCCTTCTCTCACGCCAACTGAGTCTCTTGATCTGTACATGCAATCCCAGGCAGCTCGCGAACACAAACCCGGGGCCAGCCGCCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp TTGGCTCGTACTCGCAGAAAGGTCTGGGAGAAGATCGCGGGCAGATaGAAGAAAAGAAAAGAGAGCGTCAGGCGCGGCCTGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LARTRRKVWEKIAGR*KKRKESVRRGLQSW
Trigger: CCAGGACTGCAGGCCGCGCCTGACGCTCTCTTTTCTTTTCTTGCATCTGCCCGCGATCTTCTCCCAGACCTTTCTGCGAGTACGAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475378.5
ENST00000497469.5
CDS-3UTR CAA 90 bp ACCAGAGTGCCAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGTCGGGTCTGCCGGTaGGCTCGTACTCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: TRVPMSTCQLLVPRKPPSSRVCR*ARTRRK
Trigger: CTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACT...GGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTGGCACTCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CAA 90 bp AGCAGCAGTCCCCACGTGGTGGAACGGATGGATGACCAGCCACCAGCCTCGGCCTACCTGCCCTTCATCTaGCTTCCTCCGTTTCATTTT +
Preference number: 5 (lower is better)
Translates to: SSSPHVVERMDDQPPASAYLPFI*LPPFHF
Trigger: AAAATGAAACGGAGGAAGCAAGATGAAGGGCAGGTA...GGCCGAGGCTGGTGGCTGGTCATCCATCCGTTCCACCACGTGGGGACTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CAA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCACTGTCCGGGTTCTCTTaGCCGCTGCACATGATGAAG +
Preference number: 5 (lower is better)
Translates to: LGTELEQVWPPNHRWEPALSGFS*PLHMMK
Trigger: CTTCATCATGTGCAGCGGCAAAGAGAACCCGGACAG...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp AGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTTCGATGTCGCTGTTCTaGCAGGTCTTCTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: SWNRYGPQTIGGSQQVVPSMSLF*QVFCMA
Trigger: GGCCATGCAGAAGACCTGCAAGAACAGCGACATCGA...AGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGGTAGTGCCTGGGATGAGTTCTCCATCTaGAAGGCTGCCCGGTGTAAG +
Preference number: 5 (lower is better)
Translates to: LEQVWPPNHRWEPAGSAWDEFSI*KAARCK
Trigger: CTTACACCGGGCAGCCTTCAAGATGGAGAACTCATC...CCAGGCACTACCTGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GGACACCACAGGAGAGAGAGAGGCAGGTACCCCAAGAGGTGGATGGGCCGAGCTGGGTGCAATCTAGATTaGGGGGAGCAAATTGAGGGT +
Preference number: 5 (lower is better)
Translates to: GHHRRERGRYPKRWMGRAGCNLD*GEQIEG
Trigger: ACCCTCAATTTGCTCCCCCAAATCTAGATTGCACCC...AGCTCGGCCCATCCACCTCTTGGGGTACCTGCCTCTCTCTCTCCTGTGGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 90 bp TCCAGCTGTGGCAGCCGCAGCCCTAACGAGATTACACGCGGCCTTTaGTCAGGACACAGAGCCCACGTCCGAGCCTTTTATTACTGTCTC +
Preference number: 5 (lower is better)
Translates to: SSCGSRSPNEITRGL*SGHRAHVRAFYYCL
Trigger: GAGACAGTAATAAAAGGCTCGGACGTGGGCTCTGTGTCCTGATCAAAGGCCGCGTGTAATCTCGTTAGGGCTGCGGCTGCCACAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS-3UTR CAA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGACCGTGGAAATTCCTaGGGAGAACGGTCGCACTTT +
Preference number: 5 (lower is better)
Translates to: LGTELEQVWPPNHRWEPADRGNS*GERSHF
Trigger: AAAGTGCGACCGTTCTCCCAAGGAATTTCCACGGTC...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355387.6
CDS-3UTR CAA 90 bp CTGGGAACAGAGCTGGAACAGGTATGGCCCCCAAACCATAGGTGGGAGCCAGCAGATGAGTTCTCCATCTaGAAGGCTGCCCGGTGTAAG +
Preference number: 5 (lower is better)
Translates to: LGTELEQVWPPNHRWEPADEFSI*KAARCK
Trigger: CTTACACCGGGCAGCCTTCAAGATGGAGAACTCATC...TGCTGGCTCCCACCTATGGTTTGGGGGCCATACCTGTTCCAGCTCTGTTCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACGCCTGGCACCCCACCTaGCCGATGGTACATAGAGGC +
Preference number: 5 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHAWHPT*PMVHRG
Trigger: GCCTCTATGTACCATCGGCAAGGTGGGGTGCCAGGC...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGAGCCTGGCACCCCACCTaGCCGATGGTACATAGAGGC +
Preference number: 5 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGAWHPT*PMVHRG
Trigger: GCCTCTATGTACCATCGGCAAGGTGGGGTGCCAGGC...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATAGGCAGATGGGGCAAATaGGGGCCTGGCTGTCGAACA +
Preference number: 5 (lower is better)
Translates to: KERIMSLGACAPCLGEEIGRWGK*GPGCRT
Trigger: TGTTCGACAGCCAGGCCCCAATTTGCCCCATCTGCC...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 90 bp CACTGCCTTGGCCTCTGCACTGTGATCCCTCTGCACCCCCTCGCCTaGCTCACTAGCTCTGCCTCATCATTCAGATCTAGTTTTGTTCCC +
Preference number: 5 (lower is better)
Translates to: HCLGLCTVIPLHPLA*LTSSASSFRSSFVP
Trigger: GGGAACAAAACTAGATCTGAATGATGAGGCAGAGCTAGTGAGTCAGGCGAGGGGGTGCAGAGGGATCACAGTGCAGAGGCCAAGGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474956.1
CDS GCA 90 bp TCTCGATGTCGCTGTTCTTGCAGGTCTTCTGCATGGCCTCCTGCTTaGTGCTTTCACCATTGCTGGTGGATGGCATCTCATCACTGGCCC +
Preference number: 5 (lower is better)
Translates to: SRCRCSCRSSAWPPA*CFHHCWWMASHHWP
Trigger: GGGCCAGTGATGAGATGCCATCCACCAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAACAGCGACATCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS-3UTR CAA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGTCGGGTCTGCCGGTaGGCTCGTACTCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSSRVCR*ARTRRK
Trigger: CTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACT...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp ATGCACATCACAGGCAGGCAGCACGGTCACAAAGGAGCCCCACCAGCAGCAGTCTACTCCTCAAAGCGGTaGTTGTTCTCATGCTCGATG +
Preference number: 5 (lower is better)
Translates to: MHITGRQHGHKGAPPAAVYSSKR*LFSCSM
Trigger: CATCGAGCATGAGAACAACAACCGCTTTGAGGAGTA...GACTGCTGCTGGTGGGGCTCCTTTGTGACCGTGCTGCCTGCCTGTGATGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS-3UTR CAA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTCGATGTCGCTGTTCTaGCAGGTCTTCTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVSMSLF*QVFCMA
Trigger: GGCCATGCAGAAGACCTGCAAGAACAGCGACATCGA...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCAGGCCAACCAGCACTTaGGGTCAGGGCAGGGAATAT +
Preference number: 5 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVRPTST*GQGREY
Trigger: ATATTCCCTGCCCTGACCCAAAGTGCTGGTTGGCCT...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACGGCAGATGGGGCAAATaGGGGCCTGGCTGTCGAACA +
Preference number: 5 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHGRWGK*GPGCRT
Trigger: TGTTCGACAGCCAGGCCCCAATTTGCCCCATCTGCC...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACACAACAGGAGGGACTTaGGGGTGCCTGGAGCCATGG +
Preference number: 5 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHTTGGT*GCLEPW
Trigger: CCATGGCTCCAGGCACCCCAAAGTCCCTCCTGTTGT...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACAGAGGATCATGTCCCTaGGGGCGTGTGCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHRGSCP*GRVPHV
Trigger: GACATGGGGCACACGCCCCAAGGGACATGATCCTCT...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGAGAGGATCATGTCCCTaGGGGCGTGTGCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGRGSCP*GRVPHV
Trigger: GACATGGGGCACACGCCCCAAGGGACATGATCCTCT...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp CGATGTCGCTGTTCTTGCAGGTCTTCTGCATGGCCTCCTGCTTGCTaGTTTCACCATTGCTGGTGGATGGCATCTCATCACTGGCCCATT +
Preference number: 5 (lower is better)
Translates to: RCRCSCRSSAWPPAC*FHHCWWMASHHWPI
Trigger: AATGGGCCAGTGATGAGATGCCATCCACCAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAACAGCGACATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS-3UTR CAA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATATCGATGTCGCTGTTCTaGCAGGTCTTCTGCATGGCC +
Preference number: 5 (lower is better)
Translates to: KERIMSLGACAPCLGEEISMSLF*QVFCMA
Trigger: GGCCATGCAGAAGACCTGCAAGAACAGCGACATCGA...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGCCTGGCACCCCACCTaGCCGATGGTACATAGAGGC +
Preference number: 5 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWAWHPT*PMVHRG
Trigger: GCCTCTATGTACCATCGGCAAGGTGGGGTGCCAGGC...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCGACTCTCCTTCCCTCTaGATGGAAGCAGACAACAGG +
Preference number: 5 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVDSPSL*MEADNR
Trigger: CCTGTTGTCTGCTTCCATCAAGAGGGAAGGAGAGTC...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGTGGGGTGATGCCGTaGGAGACTCTCCTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSSGVMP*ETLLPS
Trigger: AGAGGGAAGGAGAGTCTCCAACGGCATCACCCCACT...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 90 bp GGCATTTGTAACGGTCCCCACGAGATAGCTGCCGTTCAAGTTCTCTaGCCCGAGCCTTCAGAGCCTCAAACGTGGTCACAGCTGAATCTT +
Preference number: 5 (lower is better)
Translates to: GICNGPHEIAAVQVL*PEPSEPQTWSQLNL
Trigger: AAGATTCAGCTGTGACCACGTTTGAGGCTCTGAAGGCTCGGGTCAGAGAACTTGAACGGCAGCTATCTCGTGGGGACCGTTACAAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000474956.1
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS-3UTR CAA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGAGTCGGGTCTGCCGGTaGGCTCGTACTCGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWSRVCR*ARTRRK
Trigger: CTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACT...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGTGCATGGCCTCCTGCTaGCTGCTTTCACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGCMASC*LLSPLL
Trigger: CAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCA...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTGCGAGCTGCCTGGGATaGCATGTACAGATCAAGAGA +
Preference number: 5 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGASCLG*HVQIKR
Trigger: TCTCTTGATCTGTACATGCAATCCCAGGCAGCTCGC...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGGCCAACCAGCACTTaGGGTCAGGGCAGGGAATAT +
Preference number: 5 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSRPTST*GQGREY
Trigger: ATATTCCCTGCCCTGACCCAAAGTGCTGGTTGGCCT...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp TGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACCAGTTCTTAAGTCGCTaGGCCGGCGTAAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: WEKKYTPLNTEHMGEGRDQFLSR*AGVKAD
Trigger: GTCAGCCTTTACGCCGGCCAAGCGACTTAAGAACTG...GTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACAGTTCTTAAGTCGCTaGGCCGGCGTAAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGQFLSR*AGVKAD
Trigger: GTCAGCCTTTACGCCGGCCAAGCGACTTAAGAACTG...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTACAACAGGAGGGACTTaGGGGTGCCTGGAGCCATGG +
Preference number: 5 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCTTGGT*GCLEPW
Trigger: CCATGGCTCCAGGCACCCCAAAGTCCCTCCTGTTGT...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp TCGGGGAGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTGACTCTCCTTCCCTCTaGATGGAAGCAGACAACAGG +
Preference number: 5 (lower is better)
Translates to: SGRRHFFPGKGSSNPRNGDSPSL*MEADNR
Trigger: CCTGTTGTCTGCTTCCATCAAGAGGGAAGGAGAGTC...ACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCTCCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp TGTCTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGAGTGGGGTGATGCCGTaGGAGACTCTCCTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: CLGEEIYTTEHRAHGRGKSGVMP*ETLLPS
Trigger: AGAGGGAAGGAGAGTCTCCAACGGCATCACCCCACT...CTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp GAATCTTCGGTGATTTTCTCGATGTCGCTGTTCTTGCAGGTCTTCTaGATGGCCTCCTGCTTGCTGCTTTCACCATTGCTGGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: ESSVIFSMSLFLQVF*MASCLLLSPLLVDG
Trigger: GCCATCCACCAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAACAGCGACATCGAGAAAATCACCGAAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS-3UTR CAA 90 bp GACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCGCGAGCTGCCTGGGATaGCATGTACAGATCAAGAGA +
Preference number: 5 (lower is better)
Translates to: DDTFSLGKAALIPGMVLSASCLG*HVQIKR
Trigger: TCTCTTGATCTGTACATGCAATCCCAGGCAGCTCGC...GCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGAGGCCAACCAGCACTTaGGGTCAGGGCAGGGAATAT +
Preference number: 5 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQRPTST*GQGREY
Trigger: ATATTCCCTGCCCTGACCCAAAGTGCTGGTTGGCCT...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CATGAGCTAAGACTAAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCGGAATATGCACGTCCTaGTCAACTGAGACAGGTACA +
Preference number: 5 (lower is better)
Translates to: HELRLRRGSCPLGRVPHVGICTS*STETGT
Trigger: TGTACCTGTCTCAGTTGACAAGGACGTGCATATTCC...GACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTTAGTCTTAGCTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGAGTGGGGTGATGCCGTaGGAGACTCTCCTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWSGVMP*ETLLPS
Trigger: AGAGGGAAGGAGAGTCTCCAACGGCATCACCCCACT...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACGCTTCAGTCTGGTGTTaGCATGTCTGTCTGTCCGTC +
Preference number: 5 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHASVWC*HVCLSV
Trigger: GACGGACAGACAGACATGCAAACACCAGACTGAAGC...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGACACCACTGCCGTGGAAATTCCTaGGGAGAACGGTCGCACTTT +
Preference number: 5 (lower is better)
Translates to: EEIYTTEHRAHGRGKGHHCRGNS*GERSHF
Trigger: AAAGTGCGACCGTTCTCCCAAGGAATTTCCACGGCA...GTGGTGTCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CAATGTCTACGTGTCAGCTGCTTGTACCTCGGAAGCCACCTTCCAGGAGAGTGGTTCGTCACTCCTAGCTaGCAGCCTCACAATTCCATT +
Preference number: 5 (lower is better)
Translates to: QCLRVSCLYLGSHLPGEWFVTPS*QPHNSI
Trigger: AATGGAATTGTGAGGCTGCAAGCTAGGAGTGACGAA...CCACTCTCCTGGAAGGTGGCTTCCGAGGTACAAGCAGCTGACACGTAGACATTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488865.2
CDS TCA 90 bp GGTATAGGAACCGTTGGTGAAAGGAATATGCACGTCCTTGTCAACTaGGACAGGTACACCAAAGGGTCGTGGCTGCTGACAAGGGATGGA +
Preference number: 5 (lower is better)
Translates to: GIGTVGERNMHVLVN*DRYTKGSWLLTRDG
Trigger: TCCATCCCTTGTCAGCAGCCACGACCCTTTGGTGTACCTGTCTCAGTTGACAAGGACGTGCATATTCCTTTCACCAACGGTTCCTATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 90 bp CCACACCTCACTAGCCAGCACAGCCCTGCCAGGGACAAAAGAATGTaGGACTCTGTGGCTACTGGGATCAGCAAGGAAATCCTTAAAGAA +
Preference number: 5 (lower is better)
Translates to: PHLTSQHSPARDKRM*DSVATGISKEILKE
Trigger: TTCTTTAAGGATTTCCTTGCTGATCCCAGTAGCCACAGAGTCTCACATTCTTTTGTCCCTGGCAGGGCTGTGCTGGCTAGTGAGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS TCA 90 bp CCTTGGCATCTCTCCCTAAAATCCATCTATTTAAGGCCTATTCCCTaGCACGTATGCCTCCTGAGTTCACTTAGGGGCACGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: PWHLSLKSIYLRPIP*HVCLLSSLRGTGHR
Trigger: CCTGTGTCCCGTGCCCCTAAGTGAACTCAGGAGGCATACGTGTCAGGGAATAGGCCTTAAATAGATGGATTTTAGGGAGAGATGCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496262.1
CDS GCA 90 bp AGATACTTCAGTGCCCCTGACCCTGACATTTCAGGCCCTTCACTCTaGAAACCTCATCTTTCTCTGCTACTGCATGCTGCTCCAAGTGGT +
Preference number: 5 (lower is better)
Translates to: RYFSAPDPDISGPSL*KPHLSLLLHAAPSG
Trigger: ACCACTTGGAGCAGCATGCAGTAGCAGAGAAAGATGAGGTTTGCAGAGTGAAGGGCCTGAAATGTCAGGGTCAGGGGCACTGAAGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS-3UTR CAA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGATCCTCAAAGCGGTTGTaGTTCTCATGCTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGSSKRL*FSCSMS
Trigger: GGACATCGAGCATGAGAACAACAACCGCTTTGAGGA...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTATCCTCAAAGCGGTTGTaGTTCTCATGCTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVSSKRL*FSCSMS
Trigger: GGACATCGAGCATGAGAACAACAACCGCTTTGAGGA...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp AAGGAGAGGATCATGTCCCTTGGGGCGTGTGCCCCATGTCTGGGAGAAGAAATATACTCCTCAAAGCGGTaGTTGTTCTCATGCTCGATG +
Preference number: 5 (lower is better)
Translates to: KERIMSLGACAPCLGEEIYSSKR*LFSCSM
Trigger: CATCGAGCATGAGAACAACAACCGCTTTGAGGAGTA...TATTTCTTCTCCCAGACATGGGGCACACGCCCCAAGGGACATGATCCTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGATCAGCCTCTGTGTATaGTGGCTTCCCATACTCCAG +
Preference number: 5 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGISLCV*WLPILQ
Trigger: CTGGAGTATGGGAAGCCACAATACACAGAGGCTGAT...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCATCAGCCTCTGTGTATaGTGGCTTCCCATACTCCAG +
Preference number: 5 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGISLCV*WLPILQ
Trigger: CTGGAGTATGGGAAGCCACAATACACAGAGGCTGAT...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CTGGGAGAAGAAATATACACCACTGAACACCGAGCACATGGGAGAGGGAAGGGATTGCTGCTTTCACCATaGCTGGTGGATGGCATCTCA +
Preference number: 5 (lower is better)
Translates to: LGEEIYTTEHRAHGRGKGLLLSP*LVDGIS
Trigger: TGAGATGCCATCCACCAGCAATGGTGAAAGCAGCAA...TCCCTTCCCTCTCCCATGTGCTCGGTGTTCAGTGGTGTATATTTCTTCTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CACAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTCGGCTGGCCCCGGGTTaGTGTTCGCGAGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: HNIVNIHGLYYMCFSLVFRLAPG*CSRAAW
Trigger: CCAGGCAGCTCGCGAACACAAACCCGGGGCCAGCCG...AAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTCAGTTCTTAAGTCGCTaGGCCGGCGTAAAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCQFLSR*AGVKAD
Trigger: GTCAGCCTTTACGCCGGCCAAGCGACTTAAGAACTG...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 90 bp AGATGGCAGCTGTGTCCCAAAGTCATATTCCTTGCCATCTGCATCTaGGAAGCGCAAGTGGGGAGACTCTGTGTCATGGCAGTTCTTAAG +
Preference number: 5 (lower is better)
Translates to: RWQLCPKVIFLAICI*EAQVGRLCVMAVLK
Trigger: CTTAAGAACTGCCATGACACAGAGTCTCCCCACTTGCGCTTCTCAGATGCAGATGGCAAGGAATATGACTTTGGGACACAGCTGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 90 bp AAGTTCTCTGACCCGAGCCTTCAGAGCCTCAAACGTGGTCACAGCTaGATCTTCGGTGATTCTGTAAAAAGGAAGGCATGGTTGGGTAGC +
Preference number: 5 (lower is better)
Translates to: KFSDPSLQSLKRGHS*IFGDSVKRKAWLGS
Trigger: GCTACCCAACCATGCCTTCCTTTTTACAGAATCACCGAAGATTCAGCTGTGACCACGTTTGAGGCTCTGAAGGCTCGGGTCAGAGAACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474956.1
CDS-3UTR CAA 90 bp ACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCAGAGGCTACTCCTCAAAGCGGTaGTTGTTCTCATGCTCGATG +
Preference number: 5 (lower is better)
Translates to: TFSLGKAALIPGMVLSRGYSSKR*LFSCSM
Trigger: CATCGAGCATGAGAACAACAACCGCTTTGAGGAGTA...GCCTCTGCTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTATACTCCTCAAAGCGGTaGTTGTTCTCATGCTCGATG +
Preference number: 5 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVYSSKR*LFSCSM
Trigger: CATCGAGCATGAGAACAACAACCGCTTTGAGGAGTA...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGGGAATATGCACGTCCTaGTCAACTGAGACAGGTACA +
Preference number: 5 (lower is better)
Translates to: HVLQSGVCMSVCPSVSMGGICTS*STETGT
Trigger: TGTACCTGTCTCAGTTGACAAGGACGTGCATATTCC...CCCCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCGGCAGATGGGGCAAATaGGGGCCTGGCTGTCGAACA +
Preference number: 5 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVGRWGK*GPGCRT
Trigger: TGTTCGACAGCCAGGCCCCAATTTGCCCCATCTGCC...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTGCTTCAGTCTGGTGTTaGCATGTCTGTCTGTCCGTC +
Preference number: 5 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCASVWC*HVCLSV
Trigger: GACGGACAGACAGACATGCAAACACCAGACTGAAGC...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp ATGTCTTGTAGGGAGTCCTCAGGCCTCTTATCTGTTCCTTCATTCTaGTTACCACTGAGTTCTGACCACCTTTCCTCCTGCTCCAAAACC +
Preference number: 5 (lower is better)
Translates to: MSCRESSGLLSVPSF*LPLSSDHLSSCSKT
Trigger: GGTTTTGGAGCAGGAGGAAAGGTGGTCAGAACTCAGTGGTAAGCAGAATGAAGGAACAGATAAGAGGCCTGAGGACTCCCTACAAGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS-3UTR CAA 90 bp GTATGTACATGGGGAACCTGTGTGCAAGTATGTACAAAGGGAGACGGTCACTGTGGGTGCAATCTAGATTaGGGGGAGCAAATTGAGGGT +
Preference number: 5 (lower is better)
Translates to: VCTWGTCVQVCTKGDGHCGCNLD*GEQIEG
Trigger: ACCCTCAATTTGCTCCCCCAAATCTAGATTGCACCC...ACAGTGACCGTCTCCCTTTGTACATACTTGCACACAGGTTCCCCATGTACATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GGGGAGGGGACAGGTAGAGGGCGAGGAGTTGTCCCATTTATACACAACATTGTACCAAAGTCATATTCCTaGCCATCTGCATCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: GEGTGRGRGVVPFIHNIVPKSYS*PSASEK
Trigger: CTTCTCAGATGCAGATGGCAAGGAATATGACTTTGG...TACAATGTTGTGTATAAATGGGACAACTCCTCGCCCTCTACCTGTCCCCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 90 bp CGCTGCTTTCTTCTTACATCTGTCATTCCGATCCTCTGGGCTAGATaGGGCTTCCCGATCAGAAATGAGGCCAGAGACAGCAAAAATCTT +
Preference number: 5 (lower is better)
Translates to: RCFLLTSVIPILWAR*GFPIRNEARDSKNL
Trigger: AAGATTTTTGCTGTCTCTGGCCTCATTTCTGATCGGGAAGCCTCATCTAGCCCAGAGGATCGGAATGACAGATGTAAGAAGAAAGCAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCTGTCCGGGTTCTCTTaGCCGCTGCACATGATGAAG +
Preference number: 5 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVLSGFS*PLHMMK
Trigger: CTTCATCATGTGCAGCGGCAAAGAGAACCCGGACAG...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp TACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCCGTCTGTCAGTATGGGGAATATGCACGTCCTaGTCAACTGAGACAGGTACA +
Preference number: 5 (lower is better)
Translates to: YMCFSLVFACLSVRLSVWGICTS*STETGT
Trigger: TGTACCTGTCTCAGTTGACAAGGACGTGCATATTCC...CCATACTGACAGACGGACAGACAGACATGCAAACACCAGACTGAAGCACATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp AGACGACACTTTTTCCCTGGGAAAGGCAGCTCTAATCCCAGGAATGGTTCTCAGCCAAAGTCATATTCCTaGCCATCTGCATCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: RRHFFPGKGSSNPRNGSQPKSYS*PSASEK
Trigger: CTTCTCAGATGCAGATGGCAAGGAATATGACTTTGG...CTGAGAACCATTCCTGGGATTAGAGCTGCCTTTCCCAGGGAAAAAGTGTCGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp TTAATTATTCATCTCCACCTCACTCAGCCCAGATTCCTGGACAAGTaGAGTTATAAAGGGATTAAGAAGGGACAGACGAGGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LIIHLHLTQPRFLDK*SYKGIKKGQTREDR
Trigger: CCTGTCCTCCCTCGTCTGTCCCTTCTTAATCCCTTTATAACTGCACTTGTCCAGGAATCTGGGCTGAGTGAGGTGGAGATGAATAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS-3UTR CAA 90 bp ATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTAGAGGATCATGTCCCTaGGGGCGTGTGCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: IVNIHGLYYMCFSLVFACRGSCP*GRVPHV
Trigger: GACATGGGGCACACGCCCCAAGGGACATGATCCTCT...ACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCTGCCGTGGAAATTCCTaGGGAGAACGGTCGCACTTT +
Preference number: 5 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVCRGNS*GERSHF
Trigger: AAAGTGCGACCGTTCTCCCAAGGAATTTCCACGGCA...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp ATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCTGTCTTGCTGCTTTCACCATaGCTGGTGGATGGCATCTCA +
Preference number: 5 (lower is better)
Translates to: IHGLYYMCFSLVFACLSVLLLSP*LVDGIS
Trigger: TGAGATGCCATCCACCAGCAATGGTGAAAGCAGCAA...GACAGACAGACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp TCTACTAATTCACTCTGTAAACCCCAAGCATGTGCACACACAGGCTaGTCACCAAACCACAAACATAGCCTGTATATGCTGCTCTTAAGA +
Preference number: 5 (lower is better)
Translates to: STNSLCKPQACAHTG*SPNHKHSLYMLLLR
Trigger: TCTTAAGAGCAGCATATACAGGCTATGTTTGTGGTTTGGTGAGCAGCCTGTGTGTGCACATGCTTGGGGTTTACAGAGTGAATTAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS-3UTR CAA 90 bp ATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCATGTCTGTCCGGGTTCTCTTaGCCGCTGCACATGATGAAG +
Preference number: 5 (lower is better)
Translates to: IVNIHGLYYMCFSLVFACLSGFS*PLHMMK
Trigger: CTTCATCATGTGCAGCGGCAAAGAGAACCCGGACAG...ACATGCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCTGCATGGCCTCCTGCTaGCTGCTTTCACCATTGCTG +
Preference number: 5 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSCMASC*LLSPLL
Trigger: CAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCA...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCTTGCTGCTTTCACCATaGCTGGTGGATGGCATCTCA +
Preference number: 5 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCLLLSP*LVDGIS
Trigger: TGAGATGCCATCCACCAGCAATGGTGAAAGCAGCAA...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCGCGAGCTGCCTGGGATaGCATGTACAGATCAAGAGA +
Preference number: 5 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSASCLG*HVQIKR
Trigger: TCTCTTGATCTGTACATGCAATCCCAGGCAGCTCGC...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp TACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCATCACAGATGAGTTCTCCATCTaGAAGGCTGCCCGGTGTAAG +
Preference number: 5 (lower is better)
Translates to: YKGKGQVPLYRIYRHSITDEFSI*KAARCK
Trigger: CTTACACCGGGCAGCCTTCAAGATGGAGAACTCATC...TGTGATGCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 90 bp ATCAGCAAGGAAATCCTTAAAGAAGTGAGGAAGCAGCTTAGTATCTaGCTGATGATTTCAGACATTTCTGCTTGTCCACTCTTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: ISKEILKEVRKQLSI*LMISDISACPLFPL
Trigger: GAGAGGAAAGAGTGGACAAGCAGAAATGTCTGAAATCATCAGGCAGATACTAAGCTGCTTCCTCACTTCTTTAAGGATTTCCTTGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS-3UTR CAA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCTCCTCAAAGCGGTTGTaGTTCTCATGCTCGATGTCC +
Preference number: 5 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSSSKRL*FSCSMS
Trigger: GGACATCGAGCATGAGAACAACAACCGCTTTGAGGA...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp CAACATTGTAAACATACACGGTCTATATTACATGTGCTTCAGTCTGGTGTTTGCCCAAAGTCATATTCCTaGCCATCTGCATCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: QHCKHTRSILHVLQSGVCPKSYS*PSASEK
Trigger: CTTCTCAGATGCAGATGGCAAGGAATATGACTTTGG...GCAAACACCAGACTGAAGCACATGTAATATAGACCGTGTATGTTTACAATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS-3UTR CAA 90 bp GTAGTTTACAAAGGGAAAGGACAAGTACCTTTGTATAGAATATACAGACACAGCGTAGAGGGCGAGGAGTaGTCCCATTTATACACAACA +
Preference number: 5 (lower is better)
Translates to: VVYKGKGQVPLYRIYRHSVEGEE*SHLYTT
Trigger: TGTTGTGTATAAATGGGACAACTCCTCGCCCTCTAC...GCTGTGTCTGTATATTCTATACAAAGGTACTTGTCCTTTCCCTTTGTAAACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 90 bp AAGATGATAAATTCCTTCTGTTTACTTAGCATCTACCAGGTGTTCTaGTTCATACTACAGCCTATCATTTCTCCAGGCTCAACATGTAGT +
Preference number: 5 (lower is better)
Translates to: KMINSFCLLSIYQVF*FILQPIISPGSTCS
Trigger: ACTACATGTTGAGCCTGGAGAAATGATAGGCTGTAGTATGAATCAGAACACCTGGTAGATGCTAAGTAAACAGAAGGAATTTATCATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470498.1
CDS GCA 72 bp CGGCGAGGGCGGCGATGCGGGCGGATTCCCCGTGGCTaGCCGGCGGCGGCGGCACTTCAGCTCCAAGCGGCG +
Preference number: 6 (lower is better)
Translates to: RRGRRCGRIPRG*PAAAALQLQAA
Trigger: CGCCGCTTGGAGCTGAAGTGCCGCCGCCGCCGGGCAGCCACGGGGAATCCGCCCGCATCGCCGCCCTCGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335497.11
ENST00000440132.2
ENST00000471494.5
ENST00000474064.5
ENST00000488865.2
CDS GCA 72 bp CGGCCGCTCCGGGCTCTCGGCATAGCCGCCGGGCGCTaGTCTAACGGGACCCCGTGGCCGCTGCGCGGTGCC +
Preference number: 6 (lower is better)
Translates to: RPLRALGIAAGR*SNGTPWPLRGA
Trigger: GGCACCGCGCAGCGGCCACGGGGTCCCGTTAGAGCAGCGCCCGGCGGCTATGCCGAGAGCCCGGAGCGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335497.11
ENST00000440132.2
ENST00000471494.5
ENST00000474064.5
ENST00000488865.2
CDS CCA 72 bp CGGCCGGCGAGGGCGGCGATGCGGGCGGATTCCCCGTaGCTGCCCGGCGGCGGCGGCACTTCAGCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: RPARAAMRADSP*LPGGGGTSAPS
Trigger: GCTTGGAGCTGAAGTGCCGCCGCCGCCGGGCAGCCACGGGGAATCCGCCCGCATCGCCGCCCTCGCCGGCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335497.11
ENST00000440132.2
ENST00000471494.5
ENST00000474064.5
ENST00000488865.2
CDS GCA 72 bp CTGCCGCCGTCGCGCGCTGGGGGTGAAAGTTCACAATaGGGCGGGGGCGGCCGGACAGAGACCAGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LPPSRAGGESSQ*GGGGRTETRKL
Trigger: CAGCTTCCTGGTCTCTGTCCGGCCGCCCCCGCCGCATTGTGAACTTTCACCCCCAGCGCGCGACGGCGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335497.11
ENST00000440132.2
CDS CCA 72 bp GCGGCAGCGGCAGCAGCAGCAGCAGCAGTAGGCGGCTaGCCCCGGGTTTGTGTTCGCGAGCTGCCTGGGATT +
Preference number: 6 (lower is better)
Translates to: AAAAAAAAAVGG*PRVCVRELPGI
Trigger: AATCCCAGGCAGCTCGCGAACACAAACCCGGGGCCAGCCGCCTACTGCTGCTGCTGCTGCTGCCGCTGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CAA 72 bp GCGGGGGCGGCCGGACAGAGACCAGGAAGCTGCCGTTaGTACTCGGGTAGCAACCGGCAGAAGCCTCCCCGG +
Preference number: 6 (lower is better)
Translates to: AGAAGQRPGSCR*YSGSNRQKPPR
Trigger: CCGGGGAGGCTTCTGCCGGTTGCTACCCGAGTACAAACGGCAGCTTCCTGGTCTCTGTCCGGCCGCCCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335497.11
ENST00000440132.2
CDS CCA 72 bp TTCCCCCAGGCAGGCTCAGGCATAAGCACAGACATCTaGGCAGTGCCCGGAGCGGCCTCCCATTCCCCGACC +
Preference number: 6 (lower is better)
Translates to: FPQAGSGISTDI*AVPGAASHSPT
Trigger: GGTCGGGGAATGGGAGGCCGCTCCGGGCACTGCCCAGATGTCTGTGCTTATGCCTGAGCCTGCCTGGGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS GCA 72 bp CCGCCCGTGAAGCCTACCCACCCAATCTTTAGCGGCTaGGAAGTCCTTCCACCCCACTCCACGACCCCTCCC +
Preference number: 6 (lower is better)
Translates to: PPVKPTHPIFSG*EVLPPHSTTPP
Trigger: GGGAGGGGTCGTGGAGTGGGGTGGAAGGACTTCGCAGCCGCTAAAGATTGGGTGGGTAGGCTTCACGGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335497.11
ENST00000440132.2
CDS GCA 72 bp AATGCGGCGGGGGCGGCCGGACAGAGACCAGGAAGCTaGCGTTTGTACTCGGGTAGCAACCGGCAGAAGCCT +
Preference number: 6 (lower is better)
Translates to: NAAGAAGQRPGS*RLYSGSNRQKP
Trigger: AGGCTTCTGCCGGTTGCTACCCGAGTACAAACGGCAGCTTCCTGGTCTCTGTCCGGCCGCCCCCGCCGCATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335497.11
ENST00000440132.2
CDS GCA 72 bp GGCGGCGGCGGCCATGTTGGCCCTAATCACGTGATCTaGCGCCGTCGCGCGCTGGGGGTGAAAGTTCACAAT +
Preference number: 6 (lower is better)
Translates to: GGGGHVGPNHVI*RRRALGVKVHN
Trigger: ATTGTGAACTTTCACCCCCAGCGCGCGACGGCGGCAGATCACGTGATTAGGGCCAACATGGCCGCCGCCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335497.11
ENST00000440132.2
CDS TCA 72 bp CTCCGCAGGTCTCCGGGCGCTGTGATCGTGTTGCACTaGGGGCAGAGCTTCTTGGCACCCTGCAGGGAGAAC +
Preference number: 6 (lower is better)
Translates to: LRRSPGAVIVLH*GQSFLAPCREN
Trigger: GTTCTCCCTGCAGGGTGCCAAGAAGCTCTGCCCTCAGTGCAACACGATCACAGCGCCCGGAGACCTGCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS GCA 72 bp CCCAGGGTCCGCAGCCAGCACTCCTCGCAGTGCACGTaGCAACACTGGATGGACGTTAGGGGCATCGAGTAC +
Preference number: 6 (lower is better)
Translates to: PRVRSQHSSQCT*QHWMDVRGIEY
Trigger: GTACTCGATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGCTGCGGACCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000474394.5
ENST00000475378.5
ENST00000484745.5
CDS GCA 72 bp TTGGCACCCAGGGTCCGCAGCCAGCACTCCTCGCAGTaGACGTGCCAACACTGGATGGACGTTAGGGGCATC +
Preference number: 6 (lower is better)
Translates to: LAPRVRSQHSSQ*TCQHWMDVRGI
Trigger: GATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGCTGCGGACCCTGGGTGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000474394.5
ENST00000475378.5
ENST00000484745.5
CDS GCA 72 bp CACCTCACCAGGGTCCGCAGCCAGCACTCCTCGCAGTaGACGTGCCAACACTGGATGGACGTTAGGGGCATC +
Preference number: 6 (lower is better)
Translates to: HLTRVRSQHSSQ*TCQHWMDVRGI
Trigger: GATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGCTGCGGACCCTGGTGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS CAA 90 bp GGCAGCGGCAGCAGCAGCAGCAGCAGTAGGCGGCTGGCCCCGGGTTaGTGTTCGCGAGCTGCCTGGGATTGCATGTACAGATCAAGAGAC +
Preference number: 6 (lower is better)
Translates to: GSGSSSSSSRRLAPG*CSRAAWDCMYRSRD
Trigger: GTCTCTTGATCTGTACATGCAATCCCAGGCAGCTCGCGAACACAAACCCGGGGCCAGCCGCCTACTGCTGCTGCTGCTGCTGCCGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 72 bp TTTCAGGACACGGAGGGAAGCAGGCGGAGAGTGTGGTaGATGAAAAGTCCCGGGTTCGCAGAGCCGGCGGAG +
Preference number: 6 (lower is better)
Translates to: FQDTEGSRRRVW*MKSPGFAEPAE
Trigger: CTCCGCCGGCTCTGCGAACCCGGGACTTTTCATGCACCACACTCTCCGCCTGCTTCCCTCCGTGTCCTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 72 bp AGGGATGGAAGCATCACGGCTGGCCTCAGCCGTGGATaGCAGGACCATCAGTGCTGGGGATGCCAGAGGGTT +
Preference number: 6 (lower is better)
Translates to: RDGSITAGLSRG*QDHQCWGCQRV
Trigger: AACCCTCTGGCATCCCCAGCACTGATGGTCCTGGCATCCACGGCTGAGGCCAGCCGTGATGCTTCCATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 72 bp ACCAGGGTCCGCAGCCAGCACTCCTCGCAGTGCACGTaGCAACACTGGATGGACGTTAGGGGCATCGAGTAC +
Preference number: 6 (lower is better)
Translates to: TRVRSQHSSQCT*QHWMDVRGIEY
Trigger: GTACTCGATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGCTGCGGACCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS CCA 72 bp GACAAGGGATGGAAGCATCACGGCTGGCCTCAGCCGTaGATGCCAGGACCATCAGTGCTGGGGATGCCAGAG +
Preference number: 6 (lower is better)
Translates to: DKGWKHHGWPQP*MPGPSVLGMPE
Trigger: CTCTGGCATCCCCAGCACTGATGGTCCTGGCATCCACGGCTGAGGCCAGCCGTGATGCTTCCATCCCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CCA 72 bp GTCGTGGCTGCTGACAAGGGATGGAAGCATCACGGCTaGCCTCAGCCGTGGATGCCAGGACCATCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: VVAADKGWKHHG*PQPWMPGPSVL
Trigger: CAGCACTGATGGTCCTGGCATCCACGGCTGAGGCCAGCCGTGATGCTTCCATCCCTTGTCAGCAGCCACGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CAA 72 bp AGCAGCAGCAGCAGCAGTAGGCGGCTGGCCCCGGGTTaGTGTTCGCGAGCTGCCTGGGATTGCATGTACAGA +
Preference number: 6 (lower is better)
Translates to: SSSSSSRRLAPG*CSRAAWDCMYR
Trigger: TCTGTACATGCAATCCCAGGCAGCTCGCGAACACAAACCCGGGGCCAGCCGCCTACTGCTGCTGCTGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 72 bp TTGCTCGAGGGCAGTTGGGCTAGCTGCTCCAGTTCCTaGTCCATATGCTCCTGCAGCTCACTGGGCCTCAGC +
Preference number: 6 (lower is better)
Translates to: LLEGSWASCSSS*SICSCSSLGLS
Trigger: GCTGAGGCCCAGTGAGCTGCAGGAGCATATGGAGCAGGAACTGGAGCAGCTAGCCCAACTGCCCTCGAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 72 bp CGGGTAAATATCCTGGCTCCTGGCTCTGTTCTCCTTTaGGCCATGCTCCCCACTTCCCCCAGGCAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: RVNILAPGSVLL*AMLPTSPRQAQ
Trigger: CTGAGCCTGCCTGGGGGAAGTGGGGAGCATGGCGCAAAGGAGAACAGAGCCAGGAGCCAGGATATTTACCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS CCA 72 bp ACTTTTCAGGACACGGAGGGAAGCAGGCGGAGAGTGTaGTGCATGAAAAGTCCCGGGTTCGCAGAGCCGGCG +
Preference number: 6 (lower is better)
Translates to: TFQDTEGSRRRV*CMKSPGFAEPA
Trigger: CGCCGGCTCTGCGAACCCGGGACTTTTCATGCACCACACTCTCCGCCTGCTTCCCTCCGTGTCCTGAAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CCA 72 bp TTCTGTGGCCGGCGTTACGCAAGAAGCAGTCTTCCCTaGGAGGGAGGCCAACCAGCACTTTGGGTCAGGGCA +
Preference number: 6 (lower is better)
Translates to: FCGRRYARSSLP*EGGQPALWVRA
Trigger: TGCCCTGACCCAAAGTGCTGGTTGGCCTCCCTCCCAGGGAAGACTGCTTCTTGCGTAACGCCGGCCACAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000487332.1
CDS CCA 72 bp CAGGTACACCAAAGGGTCGTGGCTGCTGACAAGGGATaGAAGCATCACGGCTGGCCTCAGCCGTGGATGCCA +
Preference number: 6 (lower is better)
Translates to: QVHQRVVAADKG*KHHGWPQPWMP
Trigger: TGGCATCCACGGCTGAGGCCAGCCGTGATGCTTCCATCCCTTGTCAGCAGCCACGACCCTTTGGTGTACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CCA 72 bp CGCAGCCAGCACTCCTCGCAGTGCACGTGCCAACACTaGATGGACGTTAGGGGCATCGAGTACGAGTCCATG +
Preference number: 6 (lower is better)
Translates to: RSQHSSQCTCQH*MDVRGIEYESM
Trigger: CATGGACTCGTACTCGATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000474956.1
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS CAA 72 bp CACTGGGCCTCAGCAGGACCTGGCAGATGGGGCAAATaGGGGCCTGGCTGTCGAACAATGCCGCTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: HWASAGPGRWGK*GPGCRTMPLLS
Trigger: AGAAAGCAGCGGCATTGTTCGACAGCCAGGCCCCAATTTGCCCCATCTGCCAGGTCCTGCTGAGGCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 72 bp CTCACAAGTAGATCCTCCGCAGGTCTCCGGGCGCTGTaGTCGTGTTGCACTGAGGGCAGAGCTTCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: LTSRSSAGLRAL*SCCTEGRASWH
Trigger: GTGCCAAGAAGCTCTGCCCTCAGTGCAACACGATCACAGCGCCCGGAGACCTGCGGAGGATCTACTTGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000474064.5
ENST00000474394.5
ENST00000474956.1
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS TCA 72 bp AAGCGGTGCTGCTGCCCCCTCTGCCTCCGCCGTAGCTaGGAGCCAAACCCCTTTGCAAATGACTGCCACAAA +
Preference number: 6 (lower is better)
Translates to: KRCCCPLCLRRS*EPNPFANDCHK
Trigger: TTTGTGGCAGTCATTTGCAAAGGGGTTTGGCTCTCAGCTACGGCGGAGGCAGAGGGGGCAGCAGCACCGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487332.1
CDS GCA 72 bp ATATCCTGGCTCCTGGCTCTGTTCTCCTTTGCGCCATaGTCCCCACTTCCCCCAGGCAGGCTCAGGCATAAG +
Preference number: 6 (lower is better)
Translates to: ISWLLALFSFAP*SPLPPGRLRHK
Trigger: CTTATGCCTGAGCCTGCCTGGGGGAAGTGGGGAGCATGGCGCAAAGGAGAACAGAGCCAGGAGCCAGGATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS CCA 72 bp AGCCAGAGCCTCGGAAGCCACCTTCCAGGAGAGTGGTaGCCCGTATCCGCTTCTGTCCACACCACTCATACT +
Preference number: 6 (lower is better)
Translates to: SQSLGSHLPGEW*PVSASVHTTHT
Trigger: AGTATGAGTGGTGTGGACAGAAGCGGATACGGGCCACCACTCTCCTGGAAGGTGGCTTCCGAGGCTCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000471494.5
ENST00000474064.5
ENST00000475378.5
ENST00000484745.5
ENST00000497469.5
CDS CCA 72 bp AGGCGGCTGGCCCCGGGTTTGTGTTCGCGAGCTGCCTaGGATTGCATGTACAGATCAAGAGACTCAGTTGGC +
Preference number: 6 (lower is better)
Translates to: RRLAPGLCSRAA*DCMYRSRDSVG
Trigger: GCCAACTGAGTCTCTTGATCTGTACATGCAATCCCAGGCAGCTCGCGAACACAAACCCGGGGCCAGCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CCA 72 bp ACTGGGCCTCAGCAGGACCTGGCAGATGGGGCAAATTaGGGCCTGGCTGTCGAACAATGCCGCTGCTTTCTT +
Preference number: 6 (lower is better)
Translates to: TGPQQDLADGAN*GLAVEQCRCFL
Trigger: AAGAAAGCAGCGGCATTGTTCGACAGCCAGGCCCCAATTTGCCCCATCTGCCAGGTCCTGCTGAGGCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CCA 72 bp GCCAGCACTCCTCGCAGTGCACGTGCCAACACTGGATaGACGTTAGGGGCATCGAGTACGAGTCCATGCAGA +
Preference number: 6 (lower is better)
Translates to: ASTPRSARANTG*TLGASSTSPCR
Trigger: TCTGCATGGACTCGTACTCGATGCCCCTAACGTCCATCCAGTGTTGGCACGTGCACTGCGAGGAGTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000474956.1
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS CAA 72 bp CTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTaGCACAGGGGACATACCTGCCCTTCATCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: LLISCSDPARGR*HRGHTCPSSCF
Trigger: GAAGCAAGATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335497.11
ENST00000453863.5
ENST00000471494.5
ENST00000488865.2
ENST00000497469.5
CDS CAA 72 bp AGCCACAGAGTGGGACCCCCGGCCAACATCCTGATTTaGGCCGCTAGGTCCTTGCCAGCAAAAACACCAGGC +
Preference number: 6 (lower is better)
Translates to: SHRVGPPANILI*AARSLPAKTPG
Trigger: GCCTGGTGTTTTTGCTGGCAAGGACCTAGCGGCCAAAATCAGGATGTTGGCCGGGGGTCCCACTCTGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS CAA 90 bp TCCACATGCCTACTCATCTCCTGCTCCGATCCTGCCAGGGGGCGGTaGCACAGGGGACATACCTGCCCTTCATCTTGCTTCCTCCGTTTC +
Preference number: 6 (lower is better)
Translates to: STCLLISCSDPARGR*HRGHTCPSSCFLRF
Trigger: GAAACGGAGGAAGCAAGATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCCCCTGGCAGGATCGGAGCAGGAGATGAGTAGGCATGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335497.11
ENST00000453863.5
ENST00000471494.5
ENST00000488865.2
ENST00000497469.5
CDS CAA 90 bp GCCAATCAGAGCCACAGAGTGGGACCCCCGGCCAACATCCTGATTTaGGCCGCTAGGTCCTTGCCAGCAAAAACACCAGGCAGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: ANQSHRVGPPANILI*AARSLPAKTPGSCS
Trigger: TGAACAGCTGCCTGGTGTTTTTGCTGGCAAGGACCTAGCGGCCAAAATCAGGATGTTGGCCGGGGGTCCCACTCTGTGGCTCTGATTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS TCA 72 bp GGAGCAGTGCTGCCTCTCAGCGCTGGATCTAATCAGTaGATGAGCCTCCACTCTCCCAGGGACTCGGAGACA +
Preference number: 6 (lower is better)
Translates to: GAVLPLSAGSNQ*MSLHSPRDSET
Trigger: TGTCTCCGAGTCCCTGGGAGAGTGGAGGCTCATTCACTGATTAGATCCAGCGCTGAGAGGCAGCACTGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355387.6
CDS TCA 72 bp TCAACTGAGACAGGTACACCAAAGGGTCGTGGCTGCTaGCAAGGGATGGAAGCATCACGGCTGGCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: STETGTPKGRGC*QGMEASRLASA
Trigger: GGCTGAGGCCAGCCGTGATGCTTCCATCCCTTGTCAGCAGCCACGACCCTTTGGTGTACCTGTCTCAGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 72 bp GGCAGCCGCAGCCCTAACGAGATTACACGCGGCCTTTaGTCAGGACACAGAGCCCACGTCCGAGCCTTTTAT +
Preference number: 6 (lower is better)
Translates to: GSRSPNEITRGL*SGHRAHVRAFY
Trigger: ATAAAAGGCTCGGACGTGGGCTCTGTGTCCTGATCAAAGGCCGCGTGTAATCTCGTTAGGGCTGCGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS GCA 72 bp CCCGCCGTACCCCTGAGGACCTTGCCACGCATTTTATaGTCGACTCCTATGTGTCACCATCCACGCCACCTT +
Preference number: 6 (lower is better)
Translates to: PAVPLRTLPRIL*STPMCHHPRHL
Trigger: AAGGTGGCGTGGATGGTGACACATAGGAGTCGAGCATAAAATGCGTGGCAAGGTCCTCAGGGGTACGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474956.1
CDS CCA 72 bp TTTTCCCAATCCGAGCATTCAGTCGGGTCTGCCGGTTaGCTCGTACTCGCAGAAAGGTTTCCTCCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: FSQSEHSVGSAG*LVLAERFPPSR
Trigger: GCGGGAGGGAGGAAACCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335497.11
ENST00000440132.2
CDS CCA 72 bp TCCAGCCTGACAAGTCCATCAGAGGAGAGAACAGGCTaGCTAAGGCCAATCAGAGCCACAGAGTGGGACCCC +
Preference number: 6 (lower is better)
Translates to: SSLTSPSEERTG*LRPIRATEWDP
Trigger: GGGGTCCCACTCTGTGGCTCTGATTGGCCTTAGCCAGCCTGTTCTCTCCTCTGATGGACTTGTCAGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS CCA 72 bp TCACCACCCCTCCTCACCTGGTATCTGTCTGAATGGTaGAGGTCATCGGTGGCAGATGAGTGGGGTGATGCC +
Preference number: 6 (lower is better)
Translates to: SPPLLTWYLSEW*RSSVADEWGDA
Trigger: GGCATCACCCCACTCATCTGCCACCGATGACCTCCACCATTCAGACAGATACCAGGTGAGGAGGGGTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496262.1
CDS CAA 72 bp GCTGGCCCCGGGTTTGTGTTCGCGAGCTGCCTGGGATaGCATGTACAGATCAAGAGACTCAGTTGGCGTGAG +
Preference number: 6 (lower is better)
Translates to: AGPGFVFASCLG*HVQIKRLSWRE
Trigger: CTCACGCCAACTGAGTCTCTTGATCTGTACATGCAATCCCAGGCAGCTCGCGAACACAAACCCGGGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 72 bp CCTTGGCTTCACCAGGCTCCTCGCCTGTGCAGGGGATaGCATCAGCCTCTGTGTATTGTGGCTTCCCATACT +
Preference number: 6 (lower is better)
Translates to: PWLHQAPRLCRG*HQPLCIVASHT
Trigger: AGTATGGGAAGCCACAATACACAGAGGCTGATGTCATCCCCTGCACAGGCGAGGAGCCTGGTGAAGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000471494.5
ENST00000474064.5
ENST00000474394.5
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
ENST00000497469.5
CDS TCA 72 bp AACGGTCCCCACGAGATAGCTGCCGTTCAAGTTCTCTaGCCCGAGCCTTCAGAGCCTCAAACGTGGTCACAG +
Preference number: 6 (lower is better)
Translates to: NGPHEIAAVQVL*PEPSEPQTWSQ
Trigger: CTGTGACCACGTTTGAGGCTCTGAAGGCTCGGGTCAGAGAACTTGAACGGCAGCTATCTCGTGGGGACCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000474956.1
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS TCA 72 bp CAGTGCTGCCTCTCAGCGCTGGATCTAATCAGTGAATaGGCCTCCACTCTCCCAGGGACTCGGAGACACACA +
Preference number: 6 (lower is better)
Translates to: QCCLSALDLISE*ASTLPGTRRHT
Trigger: TGTGTGTCTCCGAGTCCCTGGGAGAGTGGAGGCTCATTCACTGATTAGATCCAGCGCTGAGAGGCAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355387.6
CDS TCA 72 bp ATGGCAGTTCTTAAGTCGCTTGGCCGGCGTAAAGGCTaGCTGATAGCTCTCCCGGTCCTCGGTGGAGGCAAA +
Preference number: 6 (lower is better)
Translates to: MAVLKSLGRRKG*LIALPVLGGGK
Trigger: TTTGCCTCCACCGAGGACCGGGAGAGCTATCAGTCAGCCTTTACGCCGGCCAAGCGACTTAAGAACTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 72 bp AGTGGGGTGATGCCGTTGGAGACTCTCCTTCCCTCTTaGTGGAAGCAGACAACAGGAGGGACTTTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: SGVMPLETLLPS*WKQTTGGTLGC
Trigger: GCACCCCAAAGTCCCTCCTGTTGTCTGCTTCCATCAAGAGGGAAGGAGAGTCTCCAACGGCATCACCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000496262.1
CDS TCA 72 bp GGCCTCTGCACTGTGATCCCTCTGCACCCCCTCGCCTaGCTCACTAGCTCTGCCTCATCATTCAGATCTAGT +
Preference number: 6 (lower is better)
Translates to: GLCTVIPLHPLA*LTSSASSFRSS
Trigger: ACTAGATCTGAATGATGAGGCAGAGCTAGTGAGTCAGGCGAGGGGGTGCAGAGGGATCACAGTGCAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474956.1
CDS GCA 72 bp CTGGCCCCGGGTTTGTGTTCGCGAGCTGCCTGGGATTaGATGTACAGATCAAGAGACTCAGTTGGCGTGAGA +
Preference number: 6 (lower is better)
Translates to: LAPGLCSRAAWD*MYRSRDSVGVR
Trigger: TCTCACGCCAACTGAGTCTCTTGATCTGTACATGCAATCCCAGGCAGCTCGCGAACACAAACCCGGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS GCA 72 bp GCACATGATGAAGCCAGAGCCTGCTCATCCTGCCTCTaGCTCCTTCTCTCTGAAGTCTGCTGGGCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: AHDEARACSSCL*LLLSEVCWAAS
Trigger: AGAAGCTGCCCAGCAGACTTCAGAGAGAAGGAGGCAGAGGCAGGATGAGCAGGCTCTGGCTTCATCATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474394.5
CDS GCA 72 bp GGAGCCGAGCTCAGGGCGCCCACCAAACTACGGCTCTaGTGGCAATTAAAATGCACACACAACACTCCTCTG +
Preference number: 6 (lower is better)
Translates to: GAELRAPTKLRL*WQLKCTHNTPL
Trigger: CAGAGGAGTGTTGTGTGTGCATTTTAATTGCCAGCAGAGCCGTAGTTTGGTGGGCGCCCTGAGCTCGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487332.1
CDS CCA 72 bp CAGACAACAGGAGGGACTTTGGGGTGCCTGGAGCCATaGCATCCTTCAGAAGGGAATTCTTGCTCGAGGGCA +
Preference number: 6 (lower is better)
Translates to: QTTGGTLGCLEP*HPSEGNSCSRA
Trigger: TGCCCTCGAGCAAGAATTCCCTTCTGAAGGATGCCATGGCTCCAGGCACCCCAAAGTCCCTCCTGTTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000496262.1
CDS CCA 72 bp CTTGCTTCTCATGGCCACTCACCACCCCTCCTCACCTaGTATCTGTCTGAATGGTGGAGGTCATCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: LASHGHSPPLLT*YLSEWWRSSVA
Trigger: TGCCACCGATGACCTCCACCATTCAGACAGATACCAGGTGAGGAGGGGTGGTGAGTGGCCATGAGAAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496262.1
CDS CAA 72 bp ATTTTCCCAATCCGAGCATTCAGTCGGGTCTGCCGGTaGGCTCGTACTCGCAGAAAGGTTTCCTCCCTCCCG +
Preference number: 6 (lower is better)
Translates to: IFPIRAFSRVCR*ARTRRKVSSLP
Trigger: CGGGAGGGAGGAAACCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335497.11
ENST00000440132.2
CDS GCA 72 bp AGAAGGGAATTCTTGCTCGAGGGCAGTTGGGCTAGCTaGTCCAGTTCCTGCTCCATATGCTCCTGCAGCTCA +
Preference number: 6 (lower is better)
Translates to: RREFLLEGSWAS*SSSCSICSCSS
Trigger: TGAGCTGCAGGAGCATATGGAGCAGGAACTGGAGCAGCTAGCCCAACTGCCCTCGAGCAAGAATTCCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CCA 72 bp GCATCTGAGAAGCGCAAGTGGGGAGACTCTGTGTCATaGCAGTTCTTAAGTCGCTTGGCCGGCGTAAAGGCT +
Preference number: 6 (lower is better)
Translates to: ASEKRKWGDSVS*QFLSRLAGVKA
Trigger: AGCCTTTACGCCGGCCAAGCGACTTAAGAACTGCCATGACACAGAGTCTCCCCACTTGCGCTTCTCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CCA 72 bp AGGTCTGGTATCTGTCTGAATGGTGGAGGTCATCGGTaGCAGATGAGTGGGGTGATGCCGTTGGAGACTCTC +
Preference number: 6 (lower is better)
Translates to: RSGICLNGGGHR*QMSGVMPLETL
Trigger: GAGAGTCTCCAACGGCATCACCCCACTCATCTGCCACCGATGACCTCCACCATTCAGACAGATACCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000453863.5
CDS CCA 72 bp CGTACTCGCAGAAAGGTCTGGTATCTGTCTGAATGGTaGAGGTCATCGGTGGCAGATGAGTGGGGTGATGCC +
Preference number: 6 (lower is better)
Translates to: RTRRKVWYLSEW*RSSVADEWGDA
Trigger: GGCATCACCCCACTCATCTGCCACCGATGACCTCCACCATTCAGACAGATACCAGACCTTTCTGCGAGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000453863.5
CDS CCA 72 bp GGGGGTAAATATCCTGCGGGTAAATATCCTGGCTCCTaGCTCTGTTCTCCTTTGCGCCATGCTCCCCACTTC +
Preference number: 6 (lower is better)
Translates to: GGKYPAGKYPGS*LCSPLRHAPHF
Trigger: GAAGTGGGGAGCATGGCGCAAAGGAGAACAGAGCCAGGAGCCAGGATATTTACCCGCAGGATATTTACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474064.5
ENST00000474956.1
ENST00000480686.5
CDS CCA 72 bp TTTTCCCAATCCGAGCATTCAGTCGGGTCTGCCGGTTaGCTCGTACTCGCAGAAAGGTCTGGGAGAAGATCG +
Preference number: 6 (lower is better)
Translates to: FSQSEHSVGSAG*LVLAERSGRRS
Trigger: CGATCTTCTCCCAGACCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475378.5
ENST00000497469.5
CDS CCA 72 bp TTTTCCCAATCCGAGCATTCAGTCGGGTCTGCCGGTTaGCTCGTACTCGCAGAAAGGTCTACTTCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: FSQSEHSVGSAG*LVLAERSTSSL
Trigger: GAGGGAGGAAGTAGACCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471494.5
ENST00000474064.5
ENST00000488865.2
CDS CCA 72 bp GCCGAGCTCAGGGCGCCCACCAAACTACGGCTCTGCTaGCAATTAAAATGCACACACAACACTCCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: AELRAPTKLRLC*QLKCTHNTPLL
Trigger: AAGCAGAGGAGTGTTGTGTGTGCATTTTAATTGCCAGCAGAGCCGTAGTTTGGTGGGCGCCCTGAGCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487332.1
CDS CCA 72 bp TCACCTGGTATCTGTCTGAATGGTGGAGGTCATCGGTaGCAGATGAGTGGGGTGATGCCGTTGGAGACTCTC +
Preference number: 6 (lower is better)
Translates to: SPGICLNGGGHR*QMSGVMPLETL
Trigger: GAGAGTCTCCAACGGCATCACCCCACTCATCTGCCACCGATGACCTCCACCATTCAGACAGATACCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496262.1
CDS CAA 72 bp TCCACATCCAAGTCAGCATCACTGTCCGGGTTCTCTTaGCCGCTGCACATGATGAAGCCAGAGCCTCGGAAG +
Preference number: 6 (lower is better)
Translates to: STSKSASLSGFS*PLHMMKPEPRK
Trigger: CTTCCGAGGCTCTGGCTTCATCATGTGCAGCGGCAAAGAGAACCCGGACAGTGATGCTGACTTGGATGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000471494.5
ENST00000474064.5
ENST00000475378.5
ENST00000484745.5
ENST00000497469.5
CDS CAA 90 bp TTCTCGATGTCGCTGTTCTTGCAGGTCTTCTGCATGGCCTCCTGCTaGCTGCTTTCACCATTGCTGGTGGATGGCATCTCATCACTGGCC +
Preference number: 6 (lower is better)
Translates to: FSMSLFLQVFCMASC*LLSPLLVDGISSLA
Trigger: GGCCAGTGATGAGATGCCATCCACCAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAACAGCGACATCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS GCA 72 bp GGGCGGTTGCACAGGGGACATACCTGCCCTTCATCTTaGTTCCTCCGTTTCATTTTCCCAATCCGAGCATTC +
Preference number: 6 (lower is better)
Translates to: GRLHRGHTCPSS*FLRFIFPIRAF
Trigger: GAATGCTCGGATTGGGAAAATGAAACGGAGGAAGCAAGATGAAGGGCAGGTATGTCCCCTGTGCAACCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335497.11
ENST00000453863.5
ENST00000471494.5
ENST00000488865.2
ENST00000497469.5
CDS CCA 72 bp TTTTCCCAATCCGAGCATTCAGTCGGGTCTGCCGGTTaGCTCGTACTCGCAGAAAGGTCTGGTATCTGTCTG +
Preference number: 6 (lower is better)
Translates to: FSQSEHSVGSAG*LVLAERSGICL
Trigger: CAGACAGATACCAGACCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000453863.5
CDS CAA 72 bp TCGCTGTTCTTGCAGGTCTTCTGCATGGCCTCCTGCTaGCTGCTTTCACCATTGCTGGTGGATGGCATCTCA +
Preference number: 6 (lower is better)
Translates to: SLFLQVFCMASC*LLSPLLVDGIS
Trigger: TGAGATGCCATCCACCAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAACAGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS CAA 72 bp AAGCAGTCTTCCCTGGGAGGGAGGCCAACCAGCACTTaGGGTCAGGGCAGGGAATATTACTGGGGAATCATT +
Preference number: 6 (lower is better)
Translates to: KQSSLGGRPTST*GQGREYYWGII
Trigger: AATGATTCCCCAGTAATATTCCCTGCCCTGACCCAAAGTGCTGGTTGGCCTCCCTCCCAGGGAAGACTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000487332.1
CDS CAA 72 bp TCCACATCCAAGTCAGCATCACTGTCCGGGTTCTCTTaGCCGCTGCACATGATGAAGCCAGAGCCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: STSKSASLSGFS*PLHMMKPEPAH
Trigger: ATGAGCAGGCTCTGGCTTCATCATGTGCAGCGGCAAAGAGAACCCGGACAGTGATGCTGACTTGGATGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474394.5
CDS CAA 72 bp ATTTTCCCAATCCGAGCATTCAGTCGGGTCTGCCGGTaGGCTCGTACTCGCAGAAAGGTCTGGGAGAAGATC +
Preference number: 6 (lower is better)
Translates to: IFPIRAFSRVCR*ARTRRKVWEKI
Trigger: GATCTTCTCCCAGACCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475378.5
ENST00000497469.5
CDS CAA 72 bp ATTTTCCCAATCCGAGCATTCAGTCGGGTCTGCCGGTaGGCTCGTACTCGCAGAAAGGTCTACTTCCTCCCT +
Preference number: 6 (lower is better)
Translates to: IFPIRAFSRVCR*ARTRRKVYFLP
Trigger: AGGGAGGAAGTAGACCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471494.5
ENST00000474064.5
ENST00000488865.2
CDS TCA 72 bp ACTAGCCAGCACAGCCCTGCCAGGGACAAAAGAATGTaGGACTCTGTGGCTACTGGGATCAGCAAGGAAATC +
Preference number: 6 (lower is better)
Translates to: TSQHSPARDKRM*DSVATGISKEI
Trigger: GATTTCCTTGCTGATCCCAGTAGCCACAGAGTCTCACATTCTTTTGTCCCTGGCAGGGCTGTGCTGGCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS GCA 72 bp TGTTCTTGCAGGTCTTCTGCATGGCCTCCTGCTTGCTaGTTTCACCATTGCTGGTGGATGGCATCTCATCAC +
Preference number: 6 (lower is better)
Translates to: CSCRSSAWPPAC*FHHCWWMASHH
Trigger: GTGATGAGATGCCATCCACCAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS GCA 72 bp GCAGATGGGGCAAATTGGGGCCTGGCTGTCGAACAATaGCGCTGCTTTCTTCTTACATCTGTCATTCCGATC +
Preference number: 6 (lower is better)
Translates to: ADGANWGLAVEQ*RCFLLTSVIPI
Trigger: GATCGGAATGACAGATGTAAGAAGAAAGCAGCGGCATTGTTCGACAGCCAGGCCCCAATTTGCCCCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CAA 72 bp ATTTTCCCAATCCGAGCATTCAGTCGGGTCTGCCGGTaGGCTCGTACTCGCAGAAAGGTCTGGTATCTGTCT +
Preference number: 6 (lower is better)
Translates to: IFPIRAFSRVCR*ARTRRKVWYLS
Trigger: AGACAGATACCAGACCTTTCTGCGAGTACGAGCCAACCGGCAGACCCGACTGAATGCTCGGATTGGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000453863.5
CDS CAA 72 bp GAATCATTCCCTCCTAAGACTTGCCGTGGAAATTCCTaGGGAGAACGGTCGCACTTTTCAGGACACGGAGGG +
Preference number: 6 (lower is better)
Translates to: ESFPPKTCRGNS*GERSHFSGHGG
Trigger: CCCTCCGTGTCCTGAAAAGTGCGACCGTTCTCCCAAGGAATTTCCACGGCAAGTCTTAGGAGGGAATGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361799.7
ENST00000372247.6
CDS TCA 72 bp GACCCGAGCCTTCAGAGCCTCAAACGTGGTCACAGCTaGATCTTCGGTGATTTTCTCGATGTCGCTGTTCTT +
Preference number: 6 (lower is better)
Translates to: DPSLQSLKRGHS*IFGDFLDVAVL
Trigger: AAGAACAGCGACATCGAGAAAATCACCGAAGATTCAGCTGTGACCACGTTTGAGGCTCTGAAGGCTCGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS TCA 72 bp ACCGTTGGTGAAAGGAATATGCACGTCCTTGTCAACTaGGACAGGTACACCAAAGGGTCGTGGCTGCTGACA +
Preference number: 6 (lower is better)
Translates to: TVGERNMHVLVN*DRYTKGSWLLT
Trigger: TGTCAGCAGCCACGACCCTTTGGTGTACCTGTCTCAGTTGACAAGGACGTGCATATTCCTTTCACCAACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 72 bp GTGGAGGCAAAGGGCCGGAAAGCCCCCACACCACTATaGTTCAGCATACTGATTGGGGTGCAATCTAGATTT +
Preference number: 6 (lower is better)
Translates to: VEAKGRKAPTPL*FSILIGVQSRF
Trigger: AAATCTAGATTGCACCCCAATCAGTATGCTGAATCATAGTGGTGTGGGGGCTTTCCGGCCCTTTGCCTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 72 bp CTTCTTACATCTGTCATTCCGATCCTCTGGGCTAGATaGGGCTTCCCGATCAGAAATGAGGCCAGAGACAGC +
Preference number: 6 (lower is better)
Translates to: LLTSVIPILWAR*GFPIRNEARDS
Trigger: GCTGTCTCTGGCCTCATTTCTGATCGGGAAGCCTCATCTAGCCCAGAGGATCGGAATGACAGATGTAAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS TCA 72 bp AATGTGGGCCGACTGATAACTCAAAGAGCCCTGGGATaGGTTAGTTCCTGTTGCCGTGGGAACTCCAGATCT +
Preference number: 6 (lower is better)
Translates to: NVGRLITQRALG*VSSCCRGNSRS
Trigger: AGATCTGGAGTTCCCACGGCAACAGGAACTAACTCATCCCAGGGCTCTTTGAGTTATCAGTCGGCCCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484745.5
CDS TCA 72 bp GCCACTGCACCCGGCCGGTATCATGCTTTTGAAGTCTaGAATCTTCAGGTGATTCTGGGCTATGTATCTGGG +
Preference number: 6 (lower is better)
Translates to: ATAPGRYHAFEV*NLQVILGYVSG
Trigger: CCCAGATACATAGCCCAGAATCACCTGAAGATTTCAGACTTCAAAAGCATGATACCGGCCGGGTGCAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496262.1
CDS GCA 72 bp GTGATTTTCTCGATGTCGCTGTTCTTGCAGGTCTTCTaGATGGCCTCCTGCTTGCTGCTTTCACCATTGCTG +
Preference number: 6 (lower is better)
Translates to: VIFSMSLFLQVF*MASCLLLSPLL
Trigger: CAGCAATGGTGAAAGCAGCAAGCAGGAGGCCATGCAGAAGACCTGCAAGAACAGCGACATCGAGAAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000335497.11
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
ENST00000440132.2
ENST00000474064.5
ENST00000474394.5
ENST00000475378.5
ENST00000480686.5
ENST00000484745.5
CDS GCA 72 bp AGGGAGTCCTCAGGCCTCTTATCTGTTCCTTCATTCTaGTTACCACTGAGTTCTGACCACCTTTCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RESSGLLSVPSF*LPLSSDHLSSC
Trigger: GCAGGAGGAAAGGTGGTCAGAACTCAGTGGTAAGCAGAATGAAGGAACAGATAAGAGGCCTGAGGACTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS CCA 72 bp AATCATTCCCTCCTAAGACTTGCCGTGGAAATTCCTTaGGAGAACGGTCGCACTTTTCAGGACACGGAGGGA +
Preference number: 6 (lower is better)
Translates to: NHSLLRLAVEIP*ENGRTFQDTEG
Trigger: TCCCTCCGTGTCCTGAAAAGTGCGACCGTTCTCCCAAGGAATTTCCACGGCAAGTCTTAGGAGGGAATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361799.7
ENST00000372247.6
CDS CAA 72 bp GAAATCACGATTGGCAAAAGTGCCTGGCACCCCACCTaGCCGATGGTACATAGAGGCAAAGGTATAGGAACC +
Preference number: 6 (lower is better)
Translates to: EITIGKSAWHPT*PMVHRGKGIGT
Trigger: GGTTCCTATACCTTTGCCTCTATGTACCATCGGCAAGGTGGGGTGCCAGGCACTTTTGCCAATCGTGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355387.6
ENST00000361799.7
ENST00000372247.6
CDS CAA 90 bp GATGAGTTAGTTCCTGTTGCCGTGGGAACTCCAGATCTCACTGTATaGTCAAGTCTCAGCAGAGGGGCTGTATTCACACTACTGGGCACT +
Preference number: 6 (lower is better)
Translates to: DELVPVAVGTPDLTV*SSLSRGAVFTLLGT
Trigger: AGTGCCCAGTAGTGTGAATACAGCCCCTCTGCTGAGACTTGACAATACAGTGAGATCTGGAGTTCCCACGGCAACAGGAACTAACTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484745.5
CDS GCA 72 bp CATCTCCACCTCACTCAGCCCAGATTCCTGGACAAGTaGAGTTATAAAGGGATTAAGAAGGGACAGACGAGG +
Preference number: 6 (lower is better)
Translates to: HLHLTQPRFLDK*SYKGIKKGQTR
Trigger: CCTCGTCTGTCCCTTCTTAATCCCTTTATAACTGCACTTGTCCAGGAATCTGGGCTGAGTGAGGTGGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS GCA 72 bp CGCCCTGCAGGTTTGTATAGTGAGGTCCCAGCAGTTTaGAAATTCAAAGCTGAGCTCCCGAGTAGAATTGTG +
Preference number: 6 (lower is better)
Translates to: RPAGLYSEVPAV*KFKAELPSRIV
Trigger: CACAATTCTACTCGGGAGCTCAGCTTTGAATTTGCAAACTGCTGGGACCTCACTATACAAACCTGCAGGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484745.5
CDS TCA 72 bp ATGCACAACCAAGCCCAGGCTCCTCAGCCAGATCCATaGAGATCTGGGTCCATTTATGTCTTTACTCTTGCT +
Preference number: 6 (lower is better)
Translates to: MHNQAQAPQPDP*RSGSIYVFTLA
Trigger: AGCAAGAGTAAAGACATAAATGGACCCAGATCTTCATGGATCTGGCTGAGGAGCCTGGGCTTGGTTGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS TCA 72 bp CAGGCCTCTTATCTGTTCCTTCATTCTGCTTACCACTaGGTTCTGACCACCTTTCCTCCTGCTCCAAAACCA +
Preference number: 6 (lower is better)
Translates to: QASYLFLHSAYH*VLTTFPPAPKP
Trigger: TGGTTTTGGAGCAGGAGGAAAGGTGGTCAGAACTCAGTGGTAAGCAGAATGAAGGAACAGATAAGAGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS TCA 72 bp CTCTCCCTAAAATCCATCTATTTAAGGCCTATTCCCTaGCACGTATGCCTCCTGAGTTCACTTAGGGGCACG +
Preference number: 6 (lower is better)
Translates to: LSLKSIYLRPIP*HVCLLSSLRGT
Trigger: CGTGCCCCTAAGTGAACTCAGGAGGCATACGTGTCAGGGAATAGGCCTTAAATAGATGGATTTTAGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496262.1
CDS GCA 72 bp TCACTCTGTAAACCCCAAGCATGTGCACACACAGGCTaGTCACCAAACCACAAACATAGCCTGTATATGCTG +
Preference number: 6 (lower is better)
Translates to: SLCKPQACAHTG*SPNHKHSLYML
Trigger: CAGCATATACAGGCTATGTTTGTGGTTTGGTGAGCAGCCTGTGTGTGCACATGCTTGGGGTTTACAGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480686.5
CDS CCA 72 bp GGGCTGTATTCACACTACTGGGCACTGATTAAAAACTaGAAGAAAAACATTCTCAGCGCCCTGCAGGTTTGT +
Preference number: 6 (lower is better)
Translates to: GLYSHYWALIKN*KKNILSALQVC
Trigger: ACAAACCTGCAGGGCGCTGAGAATGTTTTTCTTCCAGTTTTTAATCAGTGCCCAGTAGTGTGAATACAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484745.5
CDS CCA 72 bp CCTAGAGGAATTTATGTTCTCAAAGCAAATCTCTCGTaGTGTGACTTCCAACATTCCAATGTCCCCCTTGGA +
Preference number: 6 (lower is better)
Translates to: PRGIYVLKANLS*CDFQHSNVPLG
Trigger: TCCAAGGGGGACATTGGAATGTTGGAAGTCACACCACGAGAGATTTGCTTTGAGAACATAAATTCCTCTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474956.1
CDS TCA 72 bp AGGAATTTATGTTCTCAAAGCAAATCTCTCGTGGTGTaGCTTCCAACATTCCAATGTCCCCCTTGGAGTAGA +
Preference number: 6 (lower is better)
Translates to: RNLCSQSKSLVV*LPTFQCPPWSR
Trigger: TCTACTCCAAGGGGGACATTGGAATGTTGGAAGTCACACCACGAGAGATTTGCTTTGAGAACATAAATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474956.1
CDS CAA 72 bp AAACTGGAAGAAAAACATTCTCAGCGCCCTGCAGGTTaGTATAGTGAGGTCCCAGCAGTTTGCAAATTCAAA +
Preference number: 6 (lower is better)
Translates to: KLEEKHSQRPAG*YSEVPAVCKFK
Trigger: TTTGAATTTGCAAACTGCTGGGACCTCACTATACAAACCTGCAGGGCGCTGAGAATGTTTTTCTTCCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484745.5
CDS CCA 72 bp AGTCTGAAATCTTCAGGTGATTCTGGGCTATGTATCTaGGTCTCTTATGAAACCAAACCCCATAGGATACTT +
Preference number: 6 (lower is better)
Translates to: SLKSSGDSGLCI*VSYETKPHRIL
Trigger: AAGTATCCTATGGGGTTTGGTTTCATAAGAGACCCAGATACATAGCCCAGAATCACCTGAAGATTTCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496262.1