Pregenerated sensors for RNF208 (Homo sapiens)
Ensembl gene IDs: ENSG00000212864Ensembl transcript IDs: ENST00000391553.2, ENST00000392827.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGGCAGGGCCGGGTCCCTaGAGAAGCAGCGAGCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: KLAAATMPLGVGPEAMVGAGPGP*RSSERG Trigger: GCCTCGCTCGCTGCTTCTTCAGGGACCCGGCCCTGC...CCCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGCAGGGCCGGGTCCCTaGAGAAGCAGCGAGCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: TLAKSFNGKVGCSDNATRAGPGP*RSSERG Trigger: GCCTCGCTCGCTGCTTCTTCAGGGACCCGGCCCTGC...CCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR TCA 90 bp | GCCGGGTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCGCAGGGCCGGGTCCCTaGAGAAGCAGCGAGCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: AGSLKKQRARLSGQWRAGAGPGP*RSSERG Trigger: GCCTCGCTCGCTGCTTCTTCAGGGACCCGGCCCTGC...GCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGACCCGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GCCGGGTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCCTTACGGGGCCGCCGTaGCAGTGGCGGGGTATGGGG | + |
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Preference number: 4 (lower is better) Translates to: AGSLKKQRARLSGQWRAGLTGPP*QWRGMG Trigger: CCCCATACCCCGCCACTGCCACGGCGGCCCCGTAAG...GCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGACCCGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCAGGCGAGGCTCAGCGGGCAGTaGCGGGCAGGCAGGCGCTAC | + |
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Preference number: 4 (lower is better) Translates to: VPEEAASEAQRAVAGRQARLSGQ*RAGRRY Trigger: GTAGCGCCTGCCTGCCCGCCACTGCCCGCTGAGCCT...CGCCTGCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGAC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR TCA 90 bp | GCCGGGTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCGGGGCCTCCGCTGGGTaGCATTGTAGGAGTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: AGSLKKQRARLSGQWRAGGASAG*HCRSAH Trigger: GTGGGCACTCCTACAATGTCACCCAGCGGAGGCCCC...GCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGACCCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR GCA 90 bp | GTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCAGGCGCCAGGCACGCTTGGGTaGCAGAGTTGGGGTGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: VPEEAASEAQRAVAGRQAPGTLG*QSWGGP Trigger: CGGCCCACCCCAACTCTGGCACCCAAGCGTGCCTGG...CGCCTGCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR GCA 90 bp | GCCGGGTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCTCCGCACGTGGCAGGTaGACGCGGCCCCACAGTACT | + |
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Preference number: 4 (lower is better) Translates to: AGSLKKQRARLSGQWRAGSARGR*TRPHST Trigger: AGTACTGTGGGGCCGCGTGCACCTGCCACGTGCGGA...GCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGACCCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GCCGGGTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCAGGGCCAGGCACGCTTaGGTGCCAGAGTTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: AGSLKKQRARLSGQWRAGRARHA*VPELGW Trigger: CCACCCCAACTCTGGCACCCAAGCGTGCCTGGCCCT...GCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGACCCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCAGGCGAGGAGTGCCCACAGGTaGGGCACTCCAGGGGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VPEEAASEAQRAVAGRQARSAHR*GTPGAR Trigger: GCGAGCCCCTGGAGTGCCCCACCTGTGGGCACTCCT...CGCCTGCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR TCA 90 bp | GCCGGGTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCCCAGGCCGTAGTCGGTaGAGAGCACAGTCTCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGSLKKQRARLSGQWRAGPGRSR*RAQSHG Trigger: GCCGTGAGACTGTGCTCTTCACCGACTACGGCCTGG...GCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGACCCGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR GCA 90 bp | AAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGCTCCAGGGGCTCGCCTaGCGCCGCCGAAGAAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: KLAAATMPLGVGPEAMVGLQGLA*RRRRSR Trigger: GCGGCTTCTTCGGCGGCGGCAGGCGAGCCCCTGGAG...CCCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCAGGCGGGATGTTCGGGTGGGTaGGGGCGTTGTGTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VPEEAASEAQRAVAGRQAGCSGG*GRCVGL Trigger: CAGCCCCACACAACGCCCCCACCCACCCGAACATCC...CGCCTGCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCAGGCGGGAGCAGGCGGACAGTaGGTTCCGCACGTGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VPEEAASEAQRAVAGRQAGAGGQ*VPHVAG Trigger: ACCTGCCACGTGCGGAACCCACTGTCCGCCTGCTCC...CGCCTGCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR GCA 90 bp | GCCGGGTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCTGCTCACACACAGAGTaGAGGCAGGACAGCACGCGG | + |
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Preference number: 4 (lower is better) Translates to: AGSLKKQRARLSGQWRAGCSHTE*RQDSTR Trigger: CCGCGTGCTGTCCTGCCTGCACTCTGTGTGTGAGCA...GCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGACCCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | AAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGCTTACGGGGCCGCCGTaGCAGTGGCGGGGTATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLAAATMPLGVGPEAMVGLTGPP*QWRGMG Trigger: CCCCATACCCCGCCACTGCCACGGCGGCCCCGTAAG...CCCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGCAGGGCCGGGTCCCTaGAGAAGCAGCGAGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVGCSDNATRGGAGSHGGAGPGP*RSSERG Trigger: GCCTCGCTCGCTGCTTCTTCAGGGACCCGGCCCTGC...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCAGGCGAATGACCTCATCCTCTaGGGCCACGCGGGGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: VPEEAASEAQRAVAGRQANDLIL*GHAGKA Trigger: GGCTTTCCCCGCGTGGCCCCAGAGGATGAGGTCATT...CGCCTGCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGTGGCTGCAGCGACAATaGCACTCGGGGTGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KVGCSDNATRGGAGSHGGWLQRQ*HSGWGR Trigger: CCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCA...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGTGGCTGCAGCGACAATaGCACTCGGGGTGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AKLAAATMPLGVGPEAMVWLQRQ*HSGWGR Trigger: CCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCA...CACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGACAGGGCAGCATCCTaGTCCCGCCAGGCCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVGCSDNATRGGAGSHGGDRAAS*SRQAQG Trigger: ACCCTGGGCCTGGCGGGACCAGGATGCTGCCCTGTC...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGAGTGGGTTCCGCACGTaGCAGGTGCACGCGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: KVGCSDNATRGGAGSHGGSGFRT*QVHAAP Trigger: TGGGGCCGCGTGCACCTGCCACGTGCGGAACCCACT...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGGAGCAGGCGGACAGTaGGTTCCGCACGTGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KVGCSDNATRGGAGSHGGGAGGQ*VPHVAG Trigger: ACCTGCCACGTGCGGAACCCACTGTCCGCCTGCTCC...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | AAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGTGGGGCCGGAAGCCATaGTGGGGAAGGAAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: KLAAATMPLGVGPEAMVGWGRKP*WGRKGQ Trigger: CTGACCCTTCCTTCCCCACCATGGCTTCCGGCCCCA...CCCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGCAATGCCACTCGGGGTaGGGCCGGAAGCCATGGTGG | + |
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Preference number: 4 (lower is better) Translates to: AKLAAATMPLGVGPEAMVQCHSG*GRKPWW Trigger: CCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTG...CACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR TCA 90 bp | GCCGGGTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCGGCCGAATCACGTACTaGTTCACAATGACCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: AGSLKKQRARLSGQWRAGGRITY*FTMTSS Trigger: GGATGAGGTCATTGTGAATCAGTACGTGATTCGGCC...GCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGACCCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR TCA 90 bp | GCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGCCAGGCCGTAGTCGGTaGAGAGCACAGTCTCACGGC | + |
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Preference number: 4 (lower is better) Translates to: AKLAAATMPLGVGPEAMVPGRSR*RAQSHG Trigger: GCCGTGAGACTGTGCTCTTCACCGACTACGGCCTGG...CACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGTGGCGGGGTATGGGGTaGCCCTTCCAAGGCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: KVGCSDNATRGGAGSHGGWRGMG*PFQGRH Trigger: ATGCCTGCCTTGGAAGGGGCACCCCATACCCCGCCA...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR GCA 90 bp | GTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCAGGCGAATGGCAAAGTTGGCTaGAGCGACAATGCCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: VPEEAASEAQRAVAGRQANGKVG*SDNATR Trigger: CCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATT...CGCCTGCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGACTGGATGTTCGGGTaGGTGGGGGCGTTGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KVGCSDNATRGGAGSHGGDWMFG*VGALCG Trigger: CCCACACAACGCCCCCACCCACCCGAACATCCAGTC...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGTGGGGCCGGAAGCCATaGTGGGGAAGGAAGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: AKLAAATMPLGVGPEAMVWGRKP*WGRKGQ Trigger: CTGACCCTTCCTTCCCCACCATGGCTTCCGGCCCCA...CACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR TCA 90 bp | AAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGAGGTGGGGCAGGAGATaGACTTGTACTTGGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KLAAATMPLGVGPEAMVGRWGRR*TCTWGR Trigger: CCTGCCCCAAGTACAAGTTCATCTCCTGCCCCACCT...CCCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGCAGGCGCTACTACATaGTGGAGCAGGCGGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: KVGCSDNATRGGAGSHGGAGATT*WSRRTV Trigger: CACTGTCCGCCTGCTCCATCATGTAGTAGCGCCTGC...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGAATGACCTCATCCTCTaGGGCCACGCGGGGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: AKLAAATMPLGVGPEAMVNDLIL*GHAGKA Trigger: GGCTTTCCCCGCGTGGCCCCAGAGGATGAGGTCATT...CACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | AAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGATCTTGAGGATGACATaGGGACCCTTCAGGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KLAAATMPLGVGPEAMVGILRMT*GPFRQD Trigger: GTCCTGCCTGAAGGGTCCCCATGTCATCCTCAAGAT...CCCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGCCACTGACCCCCGGATaGGGCCGTCAGCGCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: AKSFNGKVGCSDNATRGGPLTPG*GRQRLR Trigger: CCTGAGGCGCTGACGGCCCCATCCGGGGGTCAGTGG...CCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR GCA 90 bp | ACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGCTCCAGGGGCTCGCCTaGCGCCGCCGAAGAAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TLAKSFNGKVGCSDNATRLQGLA*RRRRSR Trigger: GCGGCTTCTTCGGCGGCGGCAGGCGAGCCCCTGGAG...CCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGAACTTTTCAGGGTaGACAATCTTCATGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: AKLAAATMPLGVGPEAMVGNFSG*TIFMAS Trigger: GGAGGCCATGAAGATTGTCCACCCTGAAAAGTTCCC...CACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGGGAACTTTTCAGGGTaGACAATCTTCATGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KVGCSDNATRGGAGSHGGGNFSG*TIFMAS Trigger: GGAGGCCATGAAGATTGTCCACCCTGAAAAGTTCCC...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGAGGGCCAGGCACGCTTaGGTGCCAGAGTTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: AKSFNGKVGCSDNATRGGRARHA*VPELGW Trigger: CCACCCCAACTCTGGCACCCAAGCGTGCCTGGCCCT...CCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGGCAGTGGCGGGGTATaGGGTGCCCCTTCCAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: AKSFNGKVGCSDNATRGGGSGGV*GAPSKA Trigger: TGCCTTGGAAGGGGCACCCCATACCCCGCCACTGCC...CCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | ACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGCCACTGACCCCCGGATaGGGCCGTCAGCGCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: TLAKSFNGKVGCSDNATRPLTPG*GRQRLR Trigger: CCTGAGGCGCTGACGGCCCCATCCGGGGGTCAGTGG...CCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CCA 90 bp | ACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGACAGGGCAGCATCCTaGTCCCGCCAGGCCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: TLAKSFNGKVGCSDNATRDRAAS*SRQAWG Trigger: CCCCCAGGCCTGGCGGGACCAGGATGCTGCCCTGTC...CCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000391553.2 |
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| CDS-3UTR CCA 90 bp | ACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGAGTGGGTTCCGCACGTaGCAGGTGCACGCGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TLAKSFNGKVGCSDNATRSGFRT*QVHAAP Trigger: TGGGGCCGCGTGCACCTGCCACGTGCGGAACCCACT...CCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR TCA 90 bp | GCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGAATGATCTCTGTGTCTaGGGGCCAGGCACGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKSFNGKVGCSDNATRGGNDLCV*GPGTLG Trigger: CCCAAGCGTGCCTGGCCCTCAGACACAGAGATCATT...CCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGAGGTGGGGCAGGAGATaGACTTGTACTTGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AKSFNGKVGCSDNATRGGRWGRR*TCTWGR Trigger: CCTGCCCCAAGTACAAGTTCATCTCCTGCCCCACCT...CCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CCA 90 bp | GCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGTGTCTCCAGTCAGACTaGATGTTCGGGTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKSFNGKVGCSDNATRGGCLQSD*MFGWVG Trigger: CCCCACCCACCCGAACATCCAGTCTGACTGGAGACA...CCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGTGGCGGGGTATGGGGTaGCCCTTCCAAGGCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLAKSFNGKVGCSDNATRWRGMG*PFQGRH Trigger: ATGCCTGCCTTGGAAGGGGCACCCCATACCCCGCCA...CCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACAGGCCCAGGGTCTCTaGCTGCTGAGGCTGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CKLWQRVLMAKLAAATMPQAQGL*LLRLAR Trigger: CCTCGCCAGCCTCAGCAGCCAGAGACCCTGGGCCTG...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392827.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCATCAGGATGGACGTGTTaGCAGCCAGCGCGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CKLWQRVLMAKLAAATMPSGWTC*QPARPG Trigger: GCCTGGCCGCGCTGGCTGTCAACACGTCCATCCTGA...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR GCA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCATCCGCACGTGGCAGGTaGACGCGGCCCCACAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: CKLWQRVLMAKLAAATMPSARGR*TRPHST Trigger: AGTACTGTGGGGCCGCGTGCACCTGCCACGTGCGGA...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR GCA 90 bp | GCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGAATGGCAAAGTTGGCTaGAGCGACAATGCCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: AKSFNGKVGCSDNATRGGNGKVG*SDNATR Trigger: CCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATT...CCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCAGGATGTTCGGGTGGGTaGGGGCGTTGTGTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CKLWQRVLMAKLAAATMPGCSGG*GRCVGL Trigger: CAGCCCCACACAACGCCCCCACCCACCCGAACATCC...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCAGGCAGTGGCGGGGTATaGGGTGCCCCTTCCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CKLWQRVLMAKLAAATMPGSGGV*GAPSKA Trigger: TGCCTTGGAAGGGGCACCCCATACCCCGCCACTGCC...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACAATGCCACTCGGGGTaGGGCCGGAAGCCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CKLWQRVLMAKLAAATMPQCHSG*GRKPWW Trigger: CCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTG...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGGCCGAATCACGTACTaGTTCACAATGACCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AKSFNGKVGCSDNATRGGGRITY*FTMTSS Trigger: GGATGAGGTCATTGTGAATCAGTACGTGATTCGGCC...CCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCAGCAGGCGCTACTACATaGTGGAGCAGGCGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CKLWQRVLMAKLAAATMPAGATT*WSRRTV Trigger: CACTGTCCGCCTGCTCCATCATGTAGTAGCGCCTGC...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCAAATGATCTCTGTGTCTaGGGGCCAGGCACGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CKLWQRVLMAKLAAATMPNDLCV*GPGTLG Trigger: CCCAAGCGTGCCTGGCCCTCAGACACAGAGATCATT...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCATGTCTCCAGTCAGACTaGATGTTCGGGTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CKLWQRVLMAKLAAATMPCLQSD*MFGWVG Trigger: CCCCACCCACCCGAACATCCAGTCTGACTGGAGACA...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCAATCTTGAGGATGACATaGGGACCCTTCAGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CKLWQRVLMAKLAAATMPILRMT*GPFRQD Trigger: GTCCTGCCTGAAGGGTCCCCATGTCATCCTCAAGAT...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CAA 90 bp | GCCGGGTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCGAGGGCCAGGCACGCTaGGGTGCCAGAGTTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AGSLKKQRARLSGQWRAGEGQAR*GARVGV Trigger: CACCCCAACTCTGGCACCCAAGCGTGCCTGGCCCTC...GCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGACCCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS TCA 90 bp | GAGCGAGGCTCAGCGGGCAGTGGCGGGCAGGCAGGCGCTACTACATaGTGGAGCAGGCGGACAGTGGGTTCCGCACGTGGCAGGTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: ERGSAGSGGQAGATT*WSRRTVGSARGRCT Trigger: CGTGCACCTGCCACGTGCGGAACCCACTGTCCGCCTGCTCCATCATGTAGTAGCGCCTGCCTGCCCGCCACTGCCCGCTGAGCCTCGCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS CCA 90 bp | GTGGCGGGCAGGCAGGCGCTACTACATGATGGAGCAGGCGGACAGTaGGTTCCGCACGTGGCAGGTGCACGCGGCCCCACAGTACTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VAGRQALLHDGAGGQ*VPHVAGARGPTVLP Trigger: CGGCAGTACTGTGGGGCCGCGTGCACCTGCCACGTGCGGAACCCACTGTCCGCCTGCTCCATCATGTAGTAGCGCCTGCCTGCCCGCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS CCA 90 bp | AGGGCCGGGTCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTaGCGGGCAGGCAGGCGCTACTACATGATGGAGCAGGCGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAGSLKKQRARLSGQ*RAGRRYYMMEQADS Trigger: ACTGTCCGCCTGCTCCATCATGTAGTAGCGCCTGCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGACCCGGCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGCTCAGGATGGACGTGTaGACAGCCAGCGCGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KVGCSDNATRGGAGSHGGLRMDV*TASAAR Trigger: CCTGGCCGCGCTGGCTGTCAACACGTCCATCCTGAG...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS CCA 90 bp | GGGGCCAGGCCGAATCACGTACTGATTCACAATGACCTCATCCTCTaGGGCCACGCGGGGAAAGCCCAGCTCCGAGCTTCCCTTACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GARPNHVLIHNDLIL*GHAGKAQLRASLTG Trigger: CCCCGTAAGGGAAGCTCGGAGCTGGGCTTTCCCCGCGTGGCCCCAGAGGATGAGGTCATTGTGAATCAGTACGTGATTCGGCCTGGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGCCCCCACAGGCCTGGTaGACAATGATCTCTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KLAAATMPLGVGPEAMVGPPQAW*TMISVS Trigger: AGACACAGAGATCATTGTCAACCAGGCCTGTGGGGG...CCCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CAA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGGGCAGGAGATGAACTaGTACTTGGGGCAGGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: KVGCSDNATRGGAGSHGGGQEMN*YLGQDS Trigger: CGAGTCCTGCCCCAAGTACAAGTTCATCTCCTGCCC...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGCAGGAGATGAACTaGTACTTGGGGCAGGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: AKLAAATMPLGVGPEAMVGQEMN*YLGQDS Trigger: CGAGTCCTGCCCCAAGTACAAGTTCATCTCCTGCCC...CACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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| CDS-3UTR CAA 90 bp | AAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGTTCATGGCCTCCATCTaGAGGATGACATGGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: KVGCSDNATRGGAGSHGGFMASI*RMTWGP Trigger: GGGTCCCCATGTCATCCTCAAGATGGAGGCCATGAA...CCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CAA 90 bp | GCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGAGGGCCAGGCACGCTaGGGTGCCAGAGTTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AKSFNGKVGCSDNATRGGEGQAR*GARVGV Trigger: CACCCCAACTCTGGCACCCAAGCGTGCCTGGCCCTC...CCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGGCTGCAGCGACAATGCCACTCGGGGTGGGGCCGGAAGCCATGGTGGGGGTTTTAATGGCAAAGTaGGCTGCAGCGACAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLAAATMPLGVGPEAMVGVLMAK*AAATMP Trigger: TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAAC...CCCCACCATGGCTTCCGGCCCCACCCCGAGTGGCATTGTCGCTGCAGCCAACTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CAA 90 bp | ACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCACTCGGTTCATGGCCTCCATCTaGAGGATGACATGGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: TLAKSFNGKVGCSDNATRFMASI*RMTWGP Trigger: GGGTCCCCATGTCATCCTCAAGATGGAGGCCATGAA...CCGAGTGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS-3UTR CAA 90 bp | TGCAAACTTTGGCAAAGAGTTTTAATGGCAAAGTTGGCTGCAGCGACAATGCCAGTTTTAATGGCAAAGTaGGCTGCAGCGACAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CKLWQRVLMAKLAAATMPVLMAK*AAATMP Trigger: TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAAC...TGGCATTGTCGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS TCA 72 bp | TCAGCGGGCAGTGGCGGGCAGGCAGGCGCTACTACATaGTGGAGCAGGCGGACAGTGGGTTCCGCACGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SAGSGGQAGATT*WSRRTVGSARG Trigger: GCCACGTGCGGAACCCACTGTCCGCCTGCTCCATCATGTAGTAGCGCCTGCCTGCCCGCCACTGCCCGCTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS GCA 72 bp | TGGAGCAGGCGGACAGTGGGTTCCGCACGTGGCAGGTaGACGCGGCCCCACAGTACTGCCGGAAGGTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: WSRRTVGSARGR*TRPHSTAGRSG Trigger: ACCAGACCTTCCGGCAGTACTGTGGGGCCGCGTGCACCTGCCACGTGCGGAACCCACTGTCCGCCTGCTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS TCA 72 bp | GCCGCCGAGGCCGAGGGGCCAGGCCGAATCACGTACTaGTTCACAATGACCTCATCCTCTGGGGCCACGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AAEAEGPGRITY*FTMTSSSGATR Trigger: CCGCGTGGCCCCAGAGGATGAGGTCATTGTGAATCAGTACGTGATTCGGCCTGGCCCCTCGGCCTCGGCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS TCA 72 bp | AGTGCAGGCAGGACAGCACGCGGGGCCTCCGCTGGGTaGCATTGTAGGAGTGCCCACAGGTGGGGCACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SAGRTARGASAG*HCRSAHRWGTP Trigger: TGGAGTGCCCCACCTGTGGGCACTCCTACAATGTCACCCAGCGGAGGCCCCGCGTGCTGTCCTGCCTGCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS CCA 72 bp | AGGCAGGCGCTACTACATGATGGAGCAGGCGGACAGTaGGTTCCGCACGTGGCAGGTGCACGCGGCCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RQALLHDGAGGQ*VPHVAGARGPT Trigger: TGTGGGGCCGCGTGCACCTGCCACGTGCGGAACCCACTGTCCGCCTGCTCCATCATGTAGTAGCGCCTGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS CAA 90 bp | CAGGCCTGGTTGACAATGATCTCTGTGTCTGAGGGCCAGGCACGCTaGGGTGCCAGAGTTGGGGTGGGCCGGGGAGCAGGCGGGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QAWLTMISVSEGQAR*GARVGVGRGAGGKQ Trigger: CTGCTTCCCGCCTGCTCCCCGGCCCACCCCAACTCTGGCACCCAAGCGTGCCTGGCCCTCAGACACAGAGATCATTGTCAACCAGGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS CCA 72 bp | TACATGATGGAGCAGGCGGACAGTGGGTTCCGCACGTaGCAGGTGCACGCGGCCCCACAGTACTGCCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YMMEQADSGFRT*QVHAAPQYCRK Trigger: CTTCCGGCAGTACTGTGGGGCCGCGTGCACCTGCCACGTGCGGAACCCACTGTCCGCCTGCTCCATCATGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS CCA 72 bp | TCCCTGAAGAAGCAGCGAGCGAGGCTCAGCGGGCAGTaGCGGGCAGGCAGGCGCTACTACATGATGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLKKQRARLSGQ*RAGRRYYMMEQ Trigger: CTGCTCCATCATGTAGTAGCGCCTGCCTGCCCGCCACTGCCCGCTGAGCCTCGCTCGCTGCTTCTTCAGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS CCA 72 bp | CCGAATCACGTACTGATTCACAATGACCTCATCCTCTaGGGCCACGCGGGGAAAGCCCAGCTCCGAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PNHVLIHNDLIL*GHAGKAQLRAS Trigger: GGAAGCTCGGAGCTGGGCTTTCCCCGCGTGGCCCCAGAGGATGAGGTCATTGTGAATCAGTACGTGATTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
||
| CDS CAA 72 bp | AACTTTTCAGGGTGGACAATCTTCATGGCCTCCATCTaGAGGATGACATGGGGACCCTTCAGGCAGGACATG | + |
|
Preference number: 6 (lower is better) Translates to: NFSGWTIFMASI*RMTWGPFRQDM Trigger: CATGTCCTGCCTGAAGGGTCCCCATGTCATCCTCAAGATGGAGGCCATGAAGATTGTCCACCCTGAAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000391553.2 ENST00000392827.2 |
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