RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF150 (Homo sapiens)

Ensembl gene IDs: ENSG00000170153

Ensembl transcript IDs: ENST00000306799.7, ENST00000420921.6, ENST00000506101.2, ENST00000507500.5, ENST00000515057.1, ENST00000515673.7

Found 922 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACGGAGCGCCCTGGAGTTGCCAAGGTGATCTGGAGGTGTGTGTGTaGCTGGTCCAAGTCTTGGAGCACTCTTCCCTTCCTTTCCCTTGG +
Preference number: 1 (lower is better)
Translates to: NGAPWSCQGDLEVCV*LVQVLEHSSLPFPW
Trigger: CCAAGGGAAAGGAAGGGAAGAGTGCTCCAAGACTTGGACCAGGCACACACACACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 90 bp GTTTGCAGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTaGCCTTTCAGACCCCTCATCGTCTATGAGGCATCCTGTAAGTGC +
Preference number: 1 (lower is better)
Translates to: VCSRTSLGSDLPASG*PFRPLIVYEASCKC
Trigger: GCACTTACAGGATGCCTCATAGACGATGAGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 90 bp CTTTTCGTCAGCATTCTTGAACGGAGCGCCCTGGAGTTGCCAAGGTaGTCTGGAGGTGTGTGTGTGCCTGGTCCAAGTCTTGGAGCACTC +
Preference number: 1 (lower is better)
Translates to: LFVSILERSALELPR*SGGVCVPGPSLGAL
Trigger: GAGTGCTCCAAGACTTGGACCAGGCACACACACACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR GCA 90 bp GGATATTGCTTTTCGTCAGCATTCTTGAACGGAGCGCCCTGGAGTTaGCAAGGTGATCTGGAGGTGTGTGTGTGCCTGGTCCAAGTCTTG +
Preference number: 1 (lower is better)
Translates to: GYCFSSAFLNGAPWS*QGDLEVCVCLVQVL
Trigger: CAAGACTTGGACCAGGCACACACACACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAAGCAATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 90 bp CAGAAGAATGAAACGGCTTCCCTAGAGCTCCCTTCTCATGTCACGTaGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGG +
Preference number: 1 (lower is better)
Translates to: QKNETASLELPSHVT*ALNQARQVEASVMW
Trigger: CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATGAGAAGGGAGCTCTAGGGAAGCCGTTTCATTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 90 bp GACTTTGGATATTGCTTTTCGTCAGCATTCTTGAACGGAGCGCCCTaGAGTTGCCAAGGTGATCTGGAGGTGTGTGTGTGCCTGGTCCAA +
Preference number: 1 (lower is better)
Translates to: DFGYCFSSAFLNGAP*SCQGDLEVCVCLVQ
Trigger: TTGGACCAGGCACACACACACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAAGCAATATCCAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR GCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTaGCAAGGCCACAGACTGCCATACCGATGGAGAAACTGCATCCTG +
Preference number: 1 (lower is better)
Translates to: VYMDIGVEISFQLPS*QGHRLPYRWRNCIL
Trigger: CAGGATGCAGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 90 bp ATCCTGATTGACAAGACTTTGGATATTGCTTTTCGTCAGCATTCTTaGACGGAGCGCCCTGGAGTTGCCAAGGTGATCTGGAGGTGTGTG +
Preference number: 1 (lower is better)
Translates to: ILIDKTLDIAFRQHS*TERPGVAKVIWRCV
Trigger: CACACACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGTCAATCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR GCA 90 bp CTTCCCAGCTGCCAAGGCCACAGACTGCCATACCGATGGAGAAACTaGATCCTGATTGACAAGACTTTGGATATTGCTTTTCGTCAGCAT +
Preference number: 1 (lower is better)
Translates to: LPSCQGHRLPYRWRN*ILIDKTLDIAFRQH
Trigger: ATGCTGACGAAAAGCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGCAGCTGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR GCA 90 bp CACTCCCATCCCATTTTAACTGCCAACATCAAACGTATTCATCCATaGAATGGCATGGATGAAGGACCTCGGTGGCCAAGAGCACTGCAT +
Preference number: 1 (lower is better)
Translates to: HSHPILTANIKRIHP*NGMDEGPRWPRALH
Trigger: ATGCAGTGCTCTTGGCCACCGAGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAAAATGGGATGGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CCA 90 bp AAGCTACGAAGCCTGATTGCCACAAGTCATAGCTATCTGCAAAAATaGATCCTGCCTCTGAAAGACTCATCTGTGGTCCCACAGCCAGAG +
Preference number: 1 (lower is better)
Translates to: KLRSLIATSHSYLQK*ILPLKDSSVVPQPE
Trigger: CTCTGGCTGTGGGACCACAGATGAGTCTTTCAGAGGCAGGATCCATTTTTGCAGATAGCTATGACTTGTGGCAATCAGGCTTCGTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 90 bp CTGCCTTCTCCAGACTCTACCTCTCCCTGTGTAGATGACCAGAGTTaGCACTGCAGGGGATATCTAACCCTAGAGATTAAGTCAATGTTC +
Preference number: 1 (lower is better)
Translates to: LPSPDSTSPCVDDQS*HCRGYLTLEIKSMF
Trigger: GAACATTGACTTAATCTCTAGGGTTAGATATCCCCTGCAGTGTCAACTCTGGTCATCTACACAGGGAGAGGTAGAGTCTGGAGAAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR GCA 90 bp CCATTTCAGGGTGCTGAGGCACTTCTCAAAGCCATGCACACTTCATaGTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACT +
Preference number: 1 (lower is better)
Translates to: PFQGAEALLKAMHTS*WEVKTTYLRDGIQT
Trigger: AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTGAGAAGTGCCTCAGCACCCTGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 90 bp ATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTCGGTaGCCAAGAGCACTGCATGAAGAACCATGCATCCCCATCTTAAGA +
Preference number: 1 (lower is better)
Translates to: IKRIHPCNGMDEGPR*PRALHEEPCIPILR
Trigger: TCTTAAGATGGGGATGCATGGTTCTTCATGCAGTGCTCTTGGCCACCGAGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR TCA 90 bp CCAAGGCCACAGACTGCCATACCGATGGAGAAACTGCATCCTGATTaGCAAGACTTTGGATATTGCTTTTCGTCAGCATTCTTGAACGGA +
Preference number: 1 (lower is better)
Translates to: PRPQTAIPMEKLHPD*QDFGYCFSSAFLNG
Trigger: TCCGTTCAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 90 bp GCTGCCAAGGCCACAGACTGCCATACCGATGGAGAAACTGCATCCTaGTTGACAAGACTTTGGATATTGCTTTTCGTCAGCATTCTTGAA +
Preference number: 1 (lower is better)
Translates to: AAKATDCHTDGETAS*LTRLWILLFVSILE
Trigger: TTCAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 90 bp TGCTGGCTGTTGGAGGTGGTCATAATTCACCAAGTAGAGACCGGATaGTCACAGGCCCCCAAAGATTCTTTTTCAAGAAGGCCACATAAA +
Preference number: 1 (lower is better)
Translates to: CWLLEVVIIHQVETG*SQAPKDSFSRRPHK
Trigger: TTTATGTGGCCTTCTTGAAAAAGAATCTTTGGGGGCCTGTGATCATCCGGTCTCTACTTGGTGAATTATGACCACCTCCAACAGCCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR GCA 90 bp GTAAAGTTGGGTGATTTCAGTCTGGAGTTCTCTTTGGCTCCTAAGTaGCACATATCAGTCCGAGGGTTTGCCATAGAAGTGAGGGGTATA +
Preference number: 1 (lower is better)
Translates to: VKLGDFSLEFSLAPK*HISVRGFAIEVRGI
Trigger: TATACCCCTCACTTCTATGGCAAACCCTCGGACTGATATGTGGCACTTAGGAGCCAAAGAGAACTCCAGACTGAAATCACCCAACTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR GCA 90 bp CAAGGAAGCTCAGTCACACAGTCTGAATATGGAGAGGATAGACAATaGCGAGATGGAACCATCATCTACTACCTGCAGACTAGCCAGAAA +
Preference number: 1 (lower is better)
Translates to: QGSSVTQSEYGEDRQ*RDGTIIYYLQTSQK
Trigger: TTTCTGGCTAGTCTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTCAGACTGTGTGACTGAGCTTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CCA 90 bp AGCTTTCAACTTCCCAGCTGCCAAGGCCACAGACTGCCATACCGATaGAGAAACTGCATCCTGATTGACAAGACTTTGGATATTGCTTTT +
Preference number: 1 (lower is better)
Translates to: SFQLPSCQGHRLPYR*RNCILIDKTLDIAF
Trigger: AAAAGCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 90 bp TTTCAGGGTGCTGAGGCACTTCTCAAAGCCATGCACACTTCATGCTaGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGAT +
Preference number: 1 (lower is better)
Translates to: FQGAEALLKAMHTSC*EVKTTYLRDGIQTD
Trigger: ATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTGAGAAGTGCCTCAGCACCCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR GCA 90 bp GATCAGTCTTTGGTTTATATAGCACACATGGTCCCCACATTACCCTaGTTCTCCAAGCCTGTCACTTCACTAAGGATAACAGACCACAGA +
Preference number: 1 (lower is better)
Translates to: DQSLVYIAHMVPTLP*FSKPVTSLRITDHR
Trigger: TCTGTGGTCTGTTATCCTTAGTGAAGTGACAGGCTTGGAGAAGCAGGGTAATGTGGGGACCATGTGTGCTATATAAACCAAAGACTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CCA 90 bp GCCCTGGGAAGCAATCTGCTAGGGATTCACCTAAATCCTCCCACATaGTCTGGTGAGATTCAACAGAAGTGTGTCGAAATTAAGGTAAAA +
Preference number: 1 (lower is better)
Translates to: ALGSNLLGIHLNPPT*SGEIQQKCVEIKVK
Trigger: TTTTACCTTAATTTCGACACACTTCTGTTGAATCTCACCAGACCATGTGGGAGGATTTAGGTGAATCCCTAGCAGATTGCTTCCCAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 90 bp ATTACTCCAGCAGAGGGCACTCTGCTCCTTGCAATAACATCCTACTaGACAGTAAGTACCATGGATGCCAACACAAATTCAGACCGAAAA +
Preference number: 1 (lower is better)
Translates to: ITPAEGTLLLAITSY*TVSTMDANTNSDRK
Trigger: TTTTCGGTCTGAATTTGTGTTGGCATCCATGGTACTTACTGTTCAGTAGGATGTTATTGCAAGGAGCAGAGTGCCCTCTGCTGGAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CCA 90 bp GGCCAGGGCTTGCATATGCAATCAATTCCTGATTCACCTAGTTCTTaGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAATCC +
Preference number: 1 (lower is better)
Translates to: GQGLHMQSIPDSPSS*QEEKILVNQRTKQS
Trigger: GGATTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATTGCATATGCAAGCCCTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 90 bp AACATGGCAATGGTTGTAAGATGGGTTGCGATACAACTGGTGATGTaGGAAGTGAAAATGAAACTGACTCCTTTAGGGAGGACATTGGTT +
Preference number: 1 (lower is better)
Translates to: NMAMVVRWVAIQLVM*EVKMKLTPLGRTLV
Trigger: AACCAATGTCCTCCCTAAAGGAGTCAGTTTCATTTTCACTTCTCACATCACCAGTTGTATCGCAACCCATCTTACAACCATTGCCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR TCA 90 bp TGCTTTGCCATTATTTGCCCAGAAAACATTTATGGCAAGGAAGCCTaGAAACATGGCAATGGTTGTAAGATGGGTTGCGATACAACTGGT +
Preference number: 1 (lower is better)
Translates to: CFAIICPENIYGKEA*KHGNGCKMGCDTTG
Trigger: ACCAGTTGTATCGCAACCCATCTTACAACCATTGCCATGTTTTCAGGCTTCCTTGCCATAAATGTTTTCTGGGCAAATAATGGCAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR GCA 90 bp GTTGAATTCATGACCCAAGTCAAATTAATCTGCTGCAAGAATAATTaGGATTACTCCAGCAGAGGGCACTCTGCTCCTTGCAATAACATC +
Preference number: 1 (lower is better)
Translates to: VEFMTQVKLICCKNN*DYSSRGHSAPCNNI
Trigger: GATGTTATTGCAAGGAGCAGAGTGCCCTCTGCTGGAGTAATCGCAATTATTCTTGCAGCAGATTAATTTGACTTGGGTCATGAATTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR TCA 90 bp AATAAGAAAGAATCCTATGTTAGATCACTGGCATTGATTTGGTTTTaGGAGTATGGTAGCCTCAGGGATGTCAGGGCAGTAACTGAAATG +
Preference number: 1 (lower is better)
Translates to: NKKESYVRSLALIWF*EYGSLRDVRAVTEM
Trigger: CATTTCAGTTACTGCCCTGACATCCCTGAGGCTACCATACTCTCAAAACCAAATCAATGCCAGTGATCTAACATAGGATTCTTTCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR TCA 90 bp GTCACTTCACTAAGGATAACAGACCACAGATATTCTGCCAAGCAATaGCTTTGGGTAATTGAGATTAAGCGACCTTCTCTAAGGATTTTT +
Preference number: 1 (lower is better)
Translates to: VTSLRITDHRYSAKQ*LWVIEIKRPSLRIF
Trigger: AAAAATCCTTAGAGAAGGTCGCTTAATCTCAATTACCCAAAGTCATTGCTTGGCAGAATATCTGTGGTCTGTTATCCTTAGTGAAGTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR GCA 90 bp AAACTGACTCCTTTAGGGAGGACATTGGTTTATAGTAAACAGGTTTaGCTCATCAGAAGTGAATATGGATATTGCTACACAATAAAAAGA +
Preference number: 1 (lower is better)
Translates to: KLTPLGRTLVYSKQV*LIRSEYGYCYTIKR
Trigger: TCTTTTTATTGTGTAGCAATATCCATATTCACTTCTGATGAGGCAAACCTGTTTACTATAAACCAATGTCCTCCCTAAAGGAGTCAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR GCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGAGGCATCCTGTAAGTaGAGCTGTGGCCAGGGCTTG +
Preference number: 2 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPEASCK*SCGQGL
Trigger: CAAGCCCTGGCCACAGCTGCACTTACAGGATGCCTC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTGAGGCATCCTGTAAGTaGAGCTGTGGCCAGGGCTTG +
Preference number: 2 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPEASCK*SCGQGL
Trigger: CAAGCCCTGGCCACAGCTGCACTTACAGGATGCCTC...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTCTGGAGTTGCCAAGGTaGTCTGGAGGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPLELPR*SGGVCV
Trigger: CACACACACACCTCCAGATCACCTTGGCAACTCCAG...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCCGCAGCCTGGTGTTTaGCAGCTGTGTAGAGATAAG +
Preference number: 2 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPPQPGV*QLCRDK
Trigger: CTTATCTCTACACAGCTGGCAAACACCAGGCTGCGG...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTAGGTGTGTGTGTGCCTaGTCCAAGTCTTGGAGCACT +
Preference number: 2 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPRCVCA*SKSWST
Trigger: AGTGCTCCAAGACTTGGACCAGGCACACACACACCT...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTCCTCACTTGGTATCTaGACACACTCAGGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPSSLGI*THSGSP
Trigger: AGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTCCATTTCAGGGTGCTaGGGCACTTCTCAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPSISGC*GTSQSH
Trigger: ATGGCTTTGAGAAGTGCCTCAGCACCCTGAAATGGA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTAAAGCTAGGTGCTACTaGAGCCCCCACTATGTTTGC +
Preference number: 2 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPKARCY*SPHYVC
Trigger: GCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTT...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTGGAGGGGACTTCTaGGTTCAGAATTTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPLGGDF*VQNFSQ
Trigger: TTGGCTGAAATTCTGAACTCAGAAGTCCCCTCCAAG...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCAAGGTAAAAGCTAGGTaGTACTGCAGCCCCCACTAT +
Preference number: 2 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPKVKAR*YCSPHY
Trigger: ATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTT...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGCTGGAGTTGCCAAGGTaGTCTGGAGGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HVTWALNQARQVEASVMWLELPR*SGGVCV
Trigger: CACACACACACCTCCAGATCACCTTGGCAACTCCAG...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCTCAAGAATCCCACAGTaGGAGCTAGGATTTGAAGGT +
Preference number: 2 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPSRIPQ*ELGFEG
Trigger: ACCTTCAAATCCTAGCTCTCACTGTGGGATTCTTGA...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTCTAAATCCTCCCACATaGTCTGGTGAGATTCAACAG +
Preference number: 2 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPLNPPT*SGEIQQ
Trigger: CTGTTGAATCTCACCAGACCATGTGGGAGGATTTAG...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTTGCAGAAGTAAGGGCTGCTGACAGTGAGAAGATCTGTGGGGTCTCCTTCAGCGCAGCAGGACCTCCTTaGGGTCAGATCTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: FAEVRAADSEKICGVSFSAAGPP*GQICQP
Trigger: AGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGC...GCTGAAGGAGACCCCACAGATCTTCTCACTGTCAGCAGCCCTTACTTCTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR GCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGGCCATGCACACTTCATaGTGGGAGGTCAAGACCACA +
Preference number: 2 (lower is better)
Translates to: HVTWALNQARQVEASVMWAMHTS*WEVKTT
Trigger: TGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGC...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGCCATGCACACTTCATaGTGGGAGGTCAAGACCACA +
Preference number: 2 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAAMHTS*WEVKTT
Trigger: TGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGAAGCAAGTGTGATGTaGCTTAAAATAACCAGCAGT +
Preference number: 2 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPEASVM*LKITSS
Trigger: ACTGCTGGTTATTTTAAGCCACATCACACTTGCTTC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTGATTCACCTAGTTCTTaGCAGGAAGAGAAAATACTC +
Preference number: 2 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPDSPSS*QEEKIL
Trigger: GAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATC...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGATTCACCTAGTTCTTaGCAGGAAGAGAAAATACTC +
Preference number: 2 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPDSPSS*QEEKIL
Trigger: GAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTTCCATTTCAGGGTGCTaGGGCACTTCTCAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSASISGC*GTSQSH
Trigger: ATGGCTTTGAGAAGTGCCTCAGCACCCTGAAATGGA...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCAAAAATAAACACCTCTaGGATCAAGAATCCCACAGT +
Preference number: 2 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPKNKHL*DQESHS
Trigger: ACTGTGGGATTCTTGATCTCAGAGGTGTTTATTTTT...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp GTCTCTTCTTTGGGGGAGGTAAAGAAGGCTATAAGGAAGGGCTGTTCCCCTTTCCTGGAGGTGTGTGTGTaGCTGGTCCAAGTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: VSSLGEVKKAIRKGCSPFLEVCV*LVQVLE
Trigger: CTCCAAGACTTGGACCAGGCACACACACACCTCCAG...GAAAGGGGAACAGCCCTTCCTTATAGCCTTCTTTACCTCCCCCAAAGAAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR GCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAGCCAAGGCCACAGACTaGCATACCGATGGAGAAACT +
Preference number: 2 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEAKATD*HTDGET
Trigger: AGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGC...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCTTTCGTCAGCATTCTTaGACGGAGCGCCCTGGAGTT +
Preference number: 2 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGFRQHS*TERPGV
Trigger: AACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAA...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTCTTGGAGGGGACTTCTaGGTTCAGAATTTCAGCCAA +
Preference number: 2 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSALGGDF*VQNFSQ
Trigger: TTGGCTGAAATTCTGAACTCAGAAGTCCCCTCCAAG...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGGGAGCGCCCTGGAGTTaGCAAGGTGATCTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRGAPWS*QGDLEV
Trigger: CACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCC...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAAAAGCTAGGTGCTACTaGAGCCCCCACTATGTTTGC +
Preference number: 2 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLKARCY*SPHYVC
Trigger: GCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTT...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAGGTGTGTGTGTGCCTaGTCCAAGTCTTGGAGCACT +
Preference number: 2 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWRCVCA*SKSWST
Trigger: AGTGCTCCAAGACTTGGACCAGGCACACACACACCT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTAACCTATACAAAAGCTaGAGTGCATCAAAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPNLYKS*SASKEK
Trigger: TTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTT...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGTACCGATGGAGAAACTaGATCCTGATTGACAAGACT +
Preference number: 2 (lower is better)
Translates to: HVTWALNQARQVEASVMWYRWRN*ILIDKT
Trigger: AGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTA...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGCCTTCTCATGTCACGTaGGCCCTTAATCAAGCCCGG +
Preference number: 2 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWPSHVT*ALNQAR
Trigger: CCGGGCTTGATTAAGGGCCCACGTGACATGAGAAGG...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTCTGCCAGCCTCGGGTTaGCCTTTCAGACCCCTCATC +
Preference number: 2 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPLPASG*PFRPLI
Trigger: GATGAGGGGTCTGAAAGGCCAACCCGAGGCTGGCAG...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CAA 90 bp TCTAAACCTAGGGATGAGCATTTACTTGGGGACAGCACGCACATTTaGTTAAGCACAGAAGCTTTCCAGCCCTGCTTTGACCAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: SKPRDEHLLGDSTHI*LSTEAFQPCFDQLP
Trigger: AGGGAGCTGGTCAAAGCAGGGCTGGAAAGCTTCTGTGCTTAACAAAATGTGCGTGCTGTCCCCAAGTAAATGCTCATCCCTAGGTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR TCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGCTGGAGTTGCCAAGGTaGTCTGGAGGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRLELPR*SGGVCV
Trigger: CACACACACACCTCCAGATCACCTTGGCAACTCCAG...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGCTGGAGGTGTGTGTGTaGCTGGTCCAAGTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRLEVCV*LVQVLE
Trigger: CTCCAAGACTTGGACCAGGCACACACACACCTCCAG...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGTTTCAACTTCCCAGCTaGCAAGGCCACAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWFQLPS*QGHRLP
Trigger: TGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAA...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGTTTCAACTTCCCAGCTaGCAAGGCCACAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQFQLPS*QGHRLP
Trigger: TGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAA...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR GCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGGCCATGCACACTTCATaGTGGGAGGTCAAGACCACA +
Preference number: 2 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWAMHTS*WEVKTT
Trigger: TGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGC...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGGTCCCCACATTACCCTaGTTCTCCAAGCCTGTCACT +
Preference number: 2 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQVPTLP*FSKPVT
Trigger: AGTGACAGGCTTGGAGAAGCAGGGTAATGTGGGGAC...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTTTGAACGGAGCGCCCTaGAGTTGCCAAGGTGATCTG +
Preference number: 2 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTLNGAP*SCQGDL
Trigger: CAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAA...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAATGCACACTTCATGCTaGGAGGTCAAGACCACATAT +
Preference number: 2 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLMHTSC*EVKTTY
Trigger: ATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCAT...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGGATGAAGGACCTCGGTaGCCAAGAGCACTGCATGAA +
Preference number: 2 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQDEGPR*PRALHE
Trigger: TTCATGCAGTGCTCTTGGCCACCGAGGTCCTTCATC...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CAA 90 bp GAAGGGGTTGAGGTAAAGTTGGGTGATTTCAGTCTGGAGTTCTCTTaGGCTCCTAAGTGCCACATATCAGTCCGAGGGTTTGCCATAGAA +
Preference number: 2 (lower is better)
Translates to: EGVEVKLGDFSLEFS*APKCHISVRGFAIE
Trigger: TTCTATGGCAAACCCTCGGACTGATATGTGGCACTTAGGAGCCAAAGAGAACTCCAGACTGAAATCACCCAACTTTACCTCAACCCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAAACTGCATCCTGATTaGCAAGACTTTGGATATTGC +
Preference number: 2 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAKLHPD*QDFGYC
Trigger: GCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTT...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAGGAGAAACTGCATCCTaGTTGACAAGACTTTGGATA +
Preference number: 2 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLGETAS*LTRLWI
Trigger: TATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCC...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGTCCATTTCAGGGTGCTaGGGCACTTCTCAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQSISGC*GTSQSH
Trigger: ATGGCTTTGAGAAGTGCCTCAGCACCCTGAAATGGA...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR GCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGCTGGAGGTGTGTGTGTaGCTGGTCCAAGTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWLEVCV*LVQVLE
Trigger: CTCCAAGACTTGGACCAGGCACACACACACCTCCAG...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGCCAAGGCCACAGACTaGCATACCGATGGAGAAACT +
Preference number: 2 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTAKATD*HTDGET
Trigger: AGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTTGCAGAAGTAAGGGCTGCTGACAGTGAGAAGATCTGTGGGGTCTCCTTCAGCGGTTTCATTCAACCATaGAACCCACCTTCGCTTTTA +
Preference number: 2 (lower is better)
Translates to: FAEVRAADSEKICGVSFSGFIQP*NPPSLL
Trigger: TAAAAGCGAAGGTGGGTTGCATGGTTGAATGAAACC...GCTGAAGGAGACCCCACAGATCTTCTCACTGTCAGCAGCCCTTACTTCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGAGGTGTGTGTGTGCCTaGTCCAAGTCTTGGAGCACT +
Preference number: 2 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRRCVCA*SKSWST
Trigger: AGTGCTCCAAGACTTGGACCAGGCACACACACACCT...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTTGCAGAAGTAAGGGCTGCTGACAGTGAGAAGATCTGTGGGGTCTCCTTCAGCCAAATATTTATCAGGTaGCCACAGAGCAAATGGCTC +
Preference number: 2 (lower is better)
Translates to: FAEVRAADSEKICGVSFSQIFIR*PQSKWL
Trigger: GAGCCATTTGCTCTGTGGCCACCTGATAAATATTTG...GCTGAAGGAGACCCCACAGATCTTCTCACTGTCAGCAGCCCTTACTTCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CAA 90 bp AGGACTTTCACCAACCATGAACAAGAAGAAGGGGTTGAGGTAAAGTaGGGTGATTTCAGTCTGGAGTTCTCTTTGGCTCCTAAGTGCCAC +
Preference number: 2 (lower is better)
Translates to: RTFTNHEQEEGVEVK*GDFSLEFSLAPKCH
Trigger: GTGGCACTTAGGAGCCAAAGAGAACTCCAGACTGAAATCACCCAACTTTACCTCAACCCCTTCTTCTTGTTCATGGTTGGTGAAAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR TCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTCTGGAGTTGCCAAGGTaGTCTGGAGGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPLELPR*SGGVCV
Trigger: CACACACACACCTCCAGATCACCTTGGCAACTCCAG...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAAAACTGCATCCTGATTaGCAAGACTTTGGATATTGC +
Preference number: 2 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLKLHPD*QDFGYC
Trigger: GCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTT...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTATGTTTTAGGAGCTTCTaGAGTGTATGTCTACATGGA +
Preference number: 2 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLCFRSF*SVCLHG
Trigger: TCCATGTAGACATACACTTCAGAAGCTCCTAAAACA...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAATGTTTTAGGAGCTTCTaGAGTGTATGTCTACATGGA +
Preference number: 2 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSECFRSF*SVCLHG
Trigger: TCCATGTAGACATACACTTCAGAAGCTCCTAAAACA...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGTACCGATGGAGAAACTaGATCCTGATTGACAAGACT +
Preference number: 2 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWYRWRN*ILIDKT
Trigger: AGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTA...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGGCCAAGGCCACAGACTaGCATACCGATGGAGAAACT +
Preference number: 2 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWAKATD*HTDGET
Trigger: AGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGC...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTTGCAGAAGTAAGGGCTGCTGACAGTGAGAAGATCTGTGGGGTCTCCTTCAGCACTGTGTTCAGACATTaGAGACCTCTTAATAGACGT +
Preference number: 2 (lower is better)
Translates to: FAEVRAADSEKICGVSFSTVFRH*RPLNRR
Trigger: ACGTCTATTAAGAGGTCTGCAATGTCTGAACACAGT...GCTGAAGGAGACCCCACAGATCTTCTCACTGTCAGCAGCCCTTACTTCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAGAAGCAAGTGTGATGTaGCTTAAAATAACCAGCAGT +
Preference number: 2 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLEASVM*LKITSS
Trigger: ACTGCTGGTTATTTTAAGCCACATCACACTTGCTTC...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CAA 90 bp ATTCACTACAAAATAAATGGACCTCTGGGCCTCTCATTAGGCGACTaGGGTGGTGTCCAGTTCTCCCTGGAGGTAATTAAGCTTTTAACC +
Preference number: 2 (lower is better)
Translates to: IHYKINGPLGLSLGD*GGVQFSLEVIKLLT
Trigger: GGTTAAAAGCTTAATTACCTCCAGGGAGAACTGGACACCACCCAAGTCGCCTAATGAGAGGCCCAGAGGTCCATTTATTTTGTAGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CAA 90 bp CTGACCTTAGCAGGTTCTTGTAGAACAAGCAGGATTGCAATCAAATaGCTCGATATTAAGGGGCCACGTCTAGCATCTGGACTTGCTTCA +
Preference number: 2 (lower is better)
Translates to: LTLAGSCRTSRIAIK*LDIKGPRLASGLAS
Trigger: TGAAGCAAGTCCAGATGCTAGACGTGGCCCCTTAATATCGAGCAATTTGATTGCAATCCTGCTTGTTCTACAAGAACCTGCTAAGGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACTGGAGGTGTGTGTGTaGCTGGTCCAAGTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: FILSTIVVPSLKGCYYMILEVCV*LVQVLE
Trigger: CTCCAAGACTTGGACCAGGCACACACACACCTCCAG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTACAAGACTTTGGATATTaGTTTTCGTCAGCATTCTTG +
Preference number: 2 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLQDFGY*FSSAFL
Trigger: CAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTG...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGATGCACACTTCATGCTaGGAGGTCAAGACCACATAT +
Preference number: 2 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWMHTSC*EVKTTY
Trigger: ATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCAT...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGAAAGACTGGATGCCTTaGAGGGGACTTCTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRKDWMP*RGLLSS
Trigger: TGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTT...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTCATTGGGGTGGCAGGTaGATGCTGACTTGGAGTAAA +
Preference number: 2 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPHWGGR*MLTWSK
Trigger: TTTACTCCAAGTCAGCATCCACCTGCCACCCCAATG...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR TCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTGCCACTAGCCACATGTaGCTATCCAAATTGAGAGGT +
Preference number: 2 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPATSHM*LSKLRG
Trigger: ACCTCTCAATTTGGATAGTCACATGTGGCTAGTGGC...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTGCCAAGGCCACAGACTaGCATACCGATGGAGAAACT +
Preference number: 2 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPAKATD*HTDGET
Trigger: AGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGC...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATTTTCAACTTCCCAGCTaGCAAGGCCACAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDFQLPS*QGHRLP
Trigger: TGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAA...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATCCGCAGCCTGGTGTTTaGCAGCTGTGTAGAGATAAG +
Preference number: 2 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDPQPGV*QLCRDK
Trigger: CTTATCTCTACACAGCTGGCAAACACCAGGCTGCGG...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTAGGTGTGTGTGTGCCTaGTCCAAGTCTTGGAGCACT +
Preference number: 2 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPRCVCA*SKSWST
Trigger: AGTGCTCCAAGACTTGGACCAGGCACACACACACCT...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCCTTCTCATGTCACGTaGGCCCTTAATCAAGCCCGG +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTPSHVT*ALNQAR
Trigger: CCGGGCTTGATTAAGGGCCCACGTGACATGAGAAGG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGAAACTGCATCCTGATTaGCAAGACTTTGGATATTGC +
Preference number: 2 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQKLHPD*QDFGYC
Trigger: GCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTT...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR TCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAATCCATTTCAGGGTGCTaGGGCACTTCTCAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQSISGC*GTSQSH
Trigger: ATGGCTTTGAGAAGTGCCTCAGCACCCTGAAATGGA...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGTGCAGTCTACAAAACTaGGTATCACATATGTACTGC +
Preference number: 2 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQCSLQN*VSHMYC
Trigger: GCAGTACATATGTGATACTCAGTTTTGTAGACTGCA...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR GCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTTTCAACTTCCCAGCTaGCAAGGCCACAGACTGCCA +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTFQLPS*QGHRLP
Trigger: TGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTGGTTGTAAGATGGGTTaGGATACAACTGGTGATGTG +
Preference number: 2 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPGCKMG*DTTGDV
Trigger: CACATCACCAGTTGTATCGCAACCCATCTTACAACC...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCTCCTCACTTGGTATCTaGACACACTCAGGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLISSLGI*THSGSP
Trigger: AGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGA...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTGCAATGGTTGTAAGATaGGTTGCGATACAACTGGTG +
Preference number: 2 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPAMVVR*VAIQLV
Trigger: CACCAGTTGTATCGCAACCCATCTTACAACCATTGC...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR TCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATATCCCACATGGTCTGGTaGGATTCAACAGAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: FILSTIVVPSLKGCYYMISHMVW*DSTEVC
Trigger: ACACACTTCTGTTGAATCTCACCAGACCATGTGGGA...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATGCTAGTATTCTCCGTTaGCCTGCACACCATGTTTCA +
Preference number: 2 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDASILR*PAHHVS
Trigger: TGAAACATGGTGTGCAGGTCAACGGAGAATACTAGC...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCCCAAGCTACGAAGCCTaGTTGCCACAAGTCATAGCT +
Preference number: 2 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIPSYEA*LPQVIA
Trigger: AGCTATGACTTGTGGCAATCAGGCTTCGTAGCTTGG...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCCAAGCTACGAAGCCTaGTTGCCACAAGTCATAGCT +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTPSYEA*LPQVIA
Trigger: AGCTATGACTTGTGGCAATCAGGCTTCGTAGCTTGG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGTTAGATCACTGGCATTaGTTTGGTTTTGAGAGTATG +
Preference number: 2 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQLDHWH*FGFESM
Trigger: CATACTCTCAAAACCAAATCAATGCCAGTGATCTAA...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR GCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGCAAGACTTTGGATATTaGTTTTCGTCAGCATTCTTG +
Preference number: 2 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWQDFGY*FSSAFL
Trigger: CAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTG...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACACAAGACTTTGGATATTaGTTTTCGTCAGCATTCTTG +
Preference number: 2 (lower is better)
Translates to: FKSCIHSQGSALPKGLATQDFGY*FSSAFL
Trigger: CAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTG...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR GCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTACCGATGGAGAAACTaGATCCTGATTGACAAGACT +
Preference number: 2 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWYRWRN*ILIDKT
Trigger: AGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAAAGGTAAAAGCTAGGTaGTACTGCAGCCCCCACTAT +
Preference number: 2 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIKVKAR*YCSPHY
Trigger: ATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTT...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATATATTCTCCGTTGACCTaGACACCATGTTTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIYSPLT*TPCFSR
Trigger: CCTGCTGAAACATGGTGTGCAGGTCAACGGAGAATA...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAAAAGACTGGATGCCTTaGAGGGGACTTCTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQKDWMP*RGLLSS
Trigger: TGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTCCTCACTTGGTATCTaGACACACTCAGGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILSSLGI*THSGSP
Trigger: AGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTGTTTTAGGAGCTTCTaGAGTGTATGTCTACATGGA +
Preference number: 2 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWCFRSF*SVCLHG
Trigger: TCCATGTAGACATACACTTCAGAAGCTCCTAAAACA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCTCCCACATGGTCTGGTaGGATTCAACAGAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLISHMVW*DSTEVC
Trigger: ACACACTTCTGTTGAATCTCACCAGACCATGTGGGA...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTCCCACATGGTCTGGTaGGATTCAACAGAAGTGTGT +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTSHMVW*DSTEVC
Trigger: ACACACTTCTGTTGAATCTCACCAGACCATGTGGGA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGCAAGACTTTGGATATTaGTTTTCGTCAGCATTCTTG +
Preference number: 2 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRQDFGY*FSSAFL
Trigger: CAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTG...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTTACCGATGGAGAAACTaGATCCTGATTGACAAGACT +
Preference number: 2 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPYRWRN*ILIDKT
Trigger: AGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTA...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTTTTTGGACAGAGCTTTaGCTCCATGATTCTGATCAT +
Preference number: 2 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPFWTEL*LHDSDH
Trigger: ATGATCAGAATCATGGAGGCAAAGCTCTGTCCAAAA...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTAGACTGCCATACCGATaGAGAAACTGCATCCTGATT +
Preference number: 2 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPRLPYR*RNCILI
Trigger: AATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCT...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTATGCACACTTCATGCTaGGAGGTCAAGACCACATAT +
Preference number: 2 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPMHTSC*EVKTTY
Trigger: ATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCAT...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTAAAGACTGGATGCCTTaGAGGGGACTTCTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTKDWMP*RGLLSS
Trigger: TGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGGGAAACCAATGCAACTaGCATTTTGTTTTCAATAGG +
Preference number: 2 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRGNQCN*HFVFNR
Trigger: CCTATTGAAAACAAAATGCCAGTTGCATTGGTTTCC...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CTATCCAAATTGAGAGGTGCTGTGAGTGTAAAAGACACAATGGATTTAGAAGACCTAAATCCTCCCACATaGTCTGGTGAGATTCAACAG +
Preference number: 2 (lower is better)
Translates to: LSKLRGAVSVKDTMDLEDLNPPT*SGEIQQ
Trigger: CTGTTGAATCTCACCAGACCATGTGGGAGGATTTAG...GTCTTCTAAATCCATTGTGTCTTTTACACTCACAGCACCTCTCAATTTGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACAGCCAGAGGAGCTTaGGGACTCATGTTATTAAAC +
Preference number: 2 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDTARGA*GLMLLN
Trigger: GTTTAATAACATGAGTCCCCAAGCTCCTCTGGCTGT...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CTATCCAAATTGAGAGGTGCTGTGAGTGTAAAAGACACAATGGATTTAGAAGACACAGCCAGAGGAGCTTaGGGACTCATGTTATTAAAC +
Preference number: 2 (lower is better)
Translates to: LSKLRGAVSVKDTMDLEDTARGA*GLMLLN
Trigger: GTTTAATAACATGAGTCCCCAAGCTCCTCTGGCTGT...GTCTTCTAAATCCATTGTGTCTTTTACACTCACAGCACCTCTCAATTTGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR TCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACCTTCACATTATAGATaGAGAAGCCGAGGCTTAGTA +
Preference number: 2 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIPSHYR*RSRGLV
Trigger: TACTAAGCCTCGGCTTCTTCATCTATAATGTGAAGG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCGTGAGAGCTAGGATTTaGAGGTATCCAGAGATTGCA +
Preference number: 2 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIVRARI*RYPEIA
Trigger: TGCAATCTCTGGATACCTTCAAATCCTAGCTCTCAC...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTAAGGTAAAAGCTAGGTaGTACTGCAGCCCCCACTAT +
Preference number: 2 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILKVKAR*YCSPHY
Trigger: ATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTT...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTATTATGTCTGTGACTTaGATTACGTTTCTGTTGGAC +
Preference number: 2 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPIMSVT*ITFLLD
Trigger: GTCCAACAGAAACGTAATGCAAGTCACAGACATAAT...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTAGACTGCCATACCGATaGAGAAACTGCATCCTGATT +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTRLPYR*RNCILI
Trigger: AATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTAAATCCTCCCACATaGTCTGGTGAGATTCAACAG +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTLNPPT*SGEIQQ
Trigger: CTGTTGAATCTCACCAGACCATGTGGGAGGATTTAG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTACCTCATTCCTCACTTaGTATCTGGACACACTCAGG +
Preference number: 2 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILTSFLT*YLDTLR
Trigger: CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGT...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTAGCTATCTGCAAAAATaGATCCTGCCTCTGAAAGAC +
Preference number: 2 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPSYLQK*ILPLKD
Trigger: GTCTTTCAGAGGCAGGATCCATTTTTGCAGATAGCT...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CAA 90 bp TCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTTaGGTTCAAATGATACAGCAAATCACACCTCATTCCTCACTTGGT +
Preference number: 2 (lower is better)
Translates to: SVRINDLANSHAAYF*VQMIQQITPHSSLG
Trigger: ACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATTTGAACCAAAAAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTGGAGAAACTGCATCCTaGTTGACAAGACTTTGGATA +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTGETAS*LTRLWI
Trigger: TATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCC...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCGGAGAAACTGCATCCTaGTTGACAAGACTTTGGATA +
Preference number: 2 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIGETAS*LTRLWI
Trigger: TATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCC...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAAGGGTAATAATCATCTaGCTTGCCTTACTGTCTACT +
Preference number: 2 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIRVIII*LALLST
Trigger: AGTAGACAGTAAGGCAAGGCAGATGATTATTACCCT...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTAGACTGCCATACCGATaGAGAAACTGCATCCTGATT +
Preference number: 2 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILRLPYR*RNCILI
Trigger: AATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCT...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAGAAGCAAGTGTGATGTaGCTTAAAATAACCAGCAGT +
Preference number: 2 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQEASVM*LKITSS
Trigger: ACTGCTGGTTATTTTAAGCCACATCACACTTGCTTC...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTGGAGAAACTGCATCCTaGTTGACAAGACTTTGGATA +
Preference number: 2 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILGETAS*LTRLWI
Trigger: TATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCC...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTGTTTTAGGAGCTTCTaGAGTGTATGTCTACATGGA +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTCFRSF*SVCLHG
Trigger: TCCATGTAGACATACACTTCAGAAGCTCCTAAAACA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAGTTTCAGTATTTACTTaGTACCTCTTTTCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIVSVFT*YLFSFP
Trigger: GGGAAAGGAAAAGAGGTATCAAGTAAATACTGAAAC...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTGTTTCAGTATTTACTTaGTACCTCTTTTCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPVSVFT*YLFSFP
Trigger: GGGAAAGGAAAAGAGGTATCAAGTAAATACTGAAAC...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTGGAAACCAATGCAACTaGCATTTTGTTTTCAATAGG +
Preference number: 2 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPGNQCN*HFVFNR
Trigger: CCTATTGAAAACAAAATGCCAGTTGCATTGGTTTCC...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTAAACTGCATCCTGATTaGCAAGACTTTGGATATTGC +
Preference number: 2 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILKLHPD*QDFGYC
Trigger: GCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTT...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR TCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCGTTTCAGTATTTACTTaGTACCTCTTTTCCTTTCCC +
Preference number: 2 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIVSVFT*YLFSFP
Trigger: GGGAAAGGAAAAGAGGTATCAAGTAAATACTGAAAC...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAATCTAGCAAATTCTCATaGTGCATACTTTTTGGTTCA +
Preference number: 2 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQSSKFS*CILFGS
Trigger: TGAACCAAAAAGTATGCAGCATGAGAATTTGCTAGA...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAATAATCATCTGCCTTaGCTTACTGTCTACTTACAA +
Preference number: 2 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDNNHLP*LTVYLQ
Trigger: TTGTAAGTAGACAGTAAGGCAAGGCAGATGATTATT...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAACCTATACAAAAGCTaGAGTGCATCAAAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDNLYKS*SASKEK
Trigger: TTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTT...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAAACCTATACAAAAGCTaGAGTGCATCAAAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: FILSTIVVPSLKGCYYMINLYKS*SASKEK
Trigger: TTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTT...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCGGAAACCAATGCAACTaGCATTTTGTTTTCAATAGG +
Preference number: 2 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIGNQCN*HFVFNR
Trigger: CCTATTGAAAACAAAATGCCAGTTGCATTGGTTTCC...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR GCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTAATAATCATCTGCCTTaGCTTACTGTCTACTTACAA +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTNNHLP*LTVYLQ
Trigger: TTGTAAGTAGACAGTAAGGCAAGGCAGATGATTATT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTAACCTATACAAAAGCTaGAGTGCATCAAAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTNLYKS*SASKEK
Trigger: TTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp TGGCAAAGGCTCAGGGGGTTTGCAGCAGGACCTCCTTaGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCA +
Preference number: 3 (lower is better)
Translates to: WQRLRGFAAGPP*GQICQPRVGLS
Trigger: TGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGCAAACCCCCTGAGCCTTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTGCCTGGTCCAAGTCTaGGAGCACTCTTCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPCLVQV*EHSSLP
Trigger: AGGAAGGGAAGAGTGCTCCAAGACTTGGACCAGGCA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp AGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTaGCCTTTCAGACCCCTCATCGTCTATGAGGCATCC +
Preference number: 3 (lower is better)
Translates to: RTSLGSDLPASG*PFRPLIVYEAS
Trigger: GGATGCCTCATAGACGATGAGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR GCA 72 bp CCCTGGAGTTGCCAAGGTGATCTGGAGGTGTGTGTGTaGCTGGTCCAAGTCTTGGAGCACTCTTCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: PWSCQGDLEVCV*LVQVLEHSSLP
Trigger: AGGAAGGGAAGAGTGCTCCAAGACTTGGACCAGGCACACACACACCTCCAGATCACCTTGGCAACTCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp GAAACGGCTTCCCTAGAGCTCCCTTCTCATGTCACGTaGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGT +
Preference number: 3 (lower is better)
Translates to: ETASLELPSHVT*ALNQARQVEAS
Trigger: ACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATGAGAAGGGAGCTCTAGGGAAGCCGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGTGCAGCAGGACCTCCTaGGGGTCAGATCTGCCAGCC +
Preference number: 3 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQCSRTS*GSDLPA
Trigger: GGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGCA...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CCA 72 bp TATTGCTTTTCGTCAGCATTCTTGAACGGAGCGCCCTaGAGTTGCCAAGGTGATCTGGAGGTGTGTGTGTGC +
Preference number: 3 (lower is better)
Translates to: YCFSSAFLNGAP*SCQGDLEVCVC
Trigger: GCACACACACACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp ATTCATCCATGCAATGGCATGGATGAAGGACCTCGGTaGCCAAGAGCACTGCATGAAGAACCATGCATCCCC +
Preference number: 3 (lower is better)
Translates to: IHPCNGMDEGPR*PRALHEEPCIP
Trigger: GGGGATGCATGGTTCTTCATGCAGTGCTCTTGGCCACCGAGGTCCTTCATCCATGCCATTGCATGGATGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CAA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCTGCCTGGTCCAAGTCTaGGAGCACTCTTCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGCLVQV*EHSSLP
Trigger: AGGAAGGGAAGAGTGCTCCAAGACTTGGACCAGGCA...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCCATCAAATAGGAAATaGGTAAAGGTGGTGAAAAAG +
Preference number: 3 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPPSNRK*VKVVKK
Trigger: CTTTTTCACCACCTTTACCAATTTCCTATTTGATGG...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACAAAAGGCTCAGGGGGTTaGCAGCAGGACCTCCTTGGG +
Preference number: 3 (lower is better)
Translates to: FKSCIHSQGSALPKGLATKGSGG*QQDLLG
Trigger: CCCAAGGAGGTCCTGCTGCAAACCCCCTGAGCCTTT...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR TCA 72 bp TCTGCCTTCTCCAGACTCTACCTCTCCCTGTGTAGATaGCCAGAGTTGACACTGCAGGGGATATCTAACCCT +
Preference number: 3 (lower is better)
Translates to: SAFSRLYLSLCR*PELTLQGISNP
Trigger: AGGGTTAGATATCCCCTGCAGTGTCAACTCTGGTCATCTACACAGGGAGAGGTAGAGTCTGGAGAAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR GCA 72 bp GACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTaGCAAGGCCACAGACTGCCATACCGATGGAGAAAC +
Preference number: 3 (lower is better)
Translates to: DIGVEISFQLPS*QGHRLPYRWRN
Trigger: GTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp CTTCCCAGCTGCCAAGGCCACAGACTGCCATACCGATaGAGAAACTGCATCCTGATTGACAAGACTTTGGAT +
Preference number: 3 (lower is better)
Translates to: LPSCQGHRLPYR*RNCILIDKTLD
Trigger: ATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGCAGCTGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp CTGCCAACATCAAACGTATTCATCCATGCAATGGCATaGATGAAGGACCTCGGTGGCCAAGAGCACTGCATG +
Preference number: 3 (lower is better)
Translates to: LPTSNVFIHAMA*MKDLGGQEHCM
Trigger: CATGCAGTGCTCTTGGCCACCGAGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR TCA 72 bp GACAAGACTTTGGATATTGCTTTTCGTCAGCATTCTTaGACGGAGCGCCCTGGAGTTGCCAAGGTGATCTGG +
Preference number: 3 (lower is better)
Translates to: DKTLDIAFRQHS*TERPGVAKVIW
Trigger: CCAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 72 bp AGTCTGCATTTGCTTCTAGAGGGTACACACACCCTCTaGCACTCATCTGTAGACTACCAGGTCTCCAGGTCA +
Preference number: 3 (lower is better)
Translates to: SLHLLLEGTHTL*HSSVDYQVSRS
Trigger: TGACCTGGAGACCTGGTAGTCTACAGATGAGTGTCAGAGGGTGTGTGTACCCTCTAGAAGCAAATGCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR GCA 72 bp CATCCTGTAAGTGCAGCTGTGGCCAGGGCTTGCATATaGAATCAATTCCTGATTCACCTAGTTCTTGGCAGG +
Preference number: 3 (lower is better)
Translates to: HPVSAAVARACI*NQFLIHLVLGR
Trigger: CCTGCCAAGAACTAGGTGAATCAGGAATTGATTGCATATGCAAGCCCTGGCCACAGCTGCACTTACAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp ATACAGCAAATCACACCTCATTCCTCACTTGGTATCTaGACACACTCAGGGAGCCCTGGGAAGCAATCTGCT +
Preference number: 3 (lower is better)
Translates to: IQQITPHSSLGI*THSGSPGKQSA
Trigger: AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGTGCCTGGTCCAAGTCTaGGAGCACTCTTCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRCLVQV*EHSSLP
Trigger: AGGAAGGGAAGAGTGCTCCAAGACTTGGACCAGGCA...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 72 bp CCAGACTCTACCTCTCCCTGTGTAGATGACCAGAGTTaGCACTGCAGGGGATATCTAACCCTAGAGATTAAG +
Preference number: 3 (lower is better)
Translates to: PDSTSPCVDDQS*HCRGYLTLEIK
Trigger: CTTAATCTCTAGGGTTAGATATCCCCTGCAGTGTCAACTCTGGTCATCTACACAGGGAGAGGTAGAGTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR GCA 72 bp GGTGATTTCAGTCTGGAGTTCTCTTTGGCTCCTAAGTaGCACATATCAGTCCGAGGGTTTGCCATAGAAGTG +
Preference number: 3 (lower is better)
Translates to: GDFSLEFSLAPK*HISVRGFAIEV
Trigger: CACTTCTATGGCAAACCCTCGGACTGATATGTGGCACTTAGGAGCCAAAGAGAACTCCAGACTGAAATCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CCA 72 bp GCTGAGGCACTTCTCAAAGCCATGCACACTTCATGCTaGGAGGTCAAGACCACATATCTCAGAGATGGAATA +
Preference number: 3 (lower is better)
Translates to: AEALLKAMHTSC*EVKTTYLRDGI
Trigger: TATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTGAGAAGTGCCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp GTGAGTTTTCACTACAGCTGTGGGACTGGGGGACACTaGGAAAGGACTTTCACCAACCATGAACAAGAAGAA +
Preference number: 3 (lower is better)
Translates to: VSFHYSCGTGGH*ERTFTNHEQEE
Trigger: TTCTTCTTGTTCATGGTTGGTGAAAGTCCTTTCCCAGTGTCCCCCAGTCCCACAGCTGTAGTGAAAACTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CAA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCCTGGTCCAAGTCTaGGAGCACTCTTCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWCLVQV*EHSSLP
Trigger: AGGAAGGGAAGAGTGCTCCAAGACTTGGACCAGGCA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTACAAGACTTTGGATATaGCTTTTCGTCAGCATTCTT +
Preference number: 3 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSATRLWI*LFVSIL
Trigger: AAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGT...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 72 bp GCCACAGACTGCCATACCGATGGAGAAACTGCATCCTaGTTGACAAGACTTTGGATATTGCTTTTCGTCAGC +
Preference number: 3 (lower is better)
Translates to: ATDCHTDGETAS*LTRLWILLFVS
Trigger: GCTGACGAAAAGCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 72 bp CCAGTAATACTAAAATTTGTTTTGGGCAAAGCCGACTaGAGGAGGAGTCAGTGGCGCAAGCCTATGCTGACT +
Preference number: 3 (lower is better)
Translates to: PVILKFVLGKAD*RRSQWRKPMLT
Trigger: AGTCAGCATAGGCTTGCGCCACTGACTCCTCCTTCAGTCGGCTTTGCCCAAAACAAATTTTAGTATTACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR GCA 72 bp CCCATTTTAACTGCCAACATCAAACGTATTCATCCATaGAATGGCATGGATGAAGGACCTCGGTGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: PILTANIKRIHP*NGMDEGPRWPR
Trigger: TCTTGGCCACCGAGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAAAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CCA 72 bp CTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTaGCTTAAAATAACCAGCAGTGGCCTCAGCAGATTT +
Preference number: 3 (lower is better)
Translates to: LNQARQVEASVM*LKITSSGLSRF
Trigger: AAATCTGCTGAGGCCACTGCTGGTTATTTTAAGCCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp AGCCTGATTGCCACAAGTCATAGCTATCTGCAAAAATaGATCCTGCCTCTGAAAGACTCATCTGTGGTCCCA +
Preference number: 3 (lower is better)
Translates to: SLIATSHSYLQK*ILPLKDSSVVP
Trigger: TGGGACCACAGATGAGTCTTTCAGAGGCAGGATCCATTTTTGCAGATAGCTATGACTTGTGGCAATCAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGTGCATTACGTTTCTGTaGGACAGTGCTAGTCTAGAC +
Preference number: 3 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQCITFL*DSASLD
Trigger: GTCTAGACTAGCACTGTCCAACAGAAACGTAATGCA...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR TCA 72 bp ACCTGCATTGTCCAATTGGCAGCCACTAGCCACATGTaGCTATCCAAATTGAGAGGTGCTGTGAGTGTAAAA +
Preference number: 3 (lower is better)
Translates to: TCIVQLAATSHM*LSKLRGAVSVK
Trigger: TTTTACACTCACAGCACCTCTCAATTTGGATAGTCACATGTGGCTAGTGGCTGCCAATTGGACAATGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR TCA 72 bp TTGGAGGTGGTCATAATTCACCAAGTAGAGACCGGATaGTCACAGGCCCCCAAAGATTCTTTTTCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: LEVVIIHQVETG*SQAPKDSFSRR
Trigger: CCTTCTTGAAAAAGAATCTTTGGGGGCCTGTGATCATCCGGTCTCTACTTGGTGAATTATGACCACCTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR TCA 72 bp GCAGAGGGCACTCTGCTCCTTGCAATAACATCCTACTaGACAGTAAGTACCATGGATGCCAACACAAATTCA +
Preference number: 3 (lower is better)
Translates to: AEGTLLLAITSY*TVSTMDANTNS
Trigger: TGAATTTGTGTTGGCATCCATGGTACTTACTGTTCAGTAGGATGTTATTGCAAGGAGCAGAGTGCCCTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR GCA 72 bp ACTTCCTGCAGGGTGACACTCCCATCCCATTTTAACTaGCAACATCAAACGTATTCATCCATGCAATGGCAT +
Preference number: 3 (lower is better)
Translates to: TSCRVTLPSHFN*QHQTYSSMQWH
Trigger: ATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAAAATGGGATGGGAGTGTCACCCTGCAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR GCA 72 bp ATGACCCAAGTCAAATTAATCTGCTGCAAGAATAATTaGGATTACTCCAGCAGAGGGCACTCTGCTCCTTGC +
Preference number: 3 (lower is better)
Translates to: MTQVKLICCKNN*DYSSRGHSAPC
Trigger: GCAAGGAGCAGAGTGCCCTCTGCTGGAGTAATCGCAATTATTCTTGCAGCAGATTAATTTGACTTGGGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CAA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGACAAGACTTTGGATATaGCTTTTCGTCAGCATTCTT +
Preference number: 3 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWTRLWI*LFVSIL
Trigger: AAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAACAAAGACTGGATGCCTaGGAGGGGACTTCTGAGTTC +
Preference number: 3 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQQRLDA*EGTSEF
Trigger: GAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTG...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 72 bp ATGTCAAGTAACTCTACCTCCCCAAGCTACGAAGCCTaGTTGCCACAAGTCATAGCTATCTGCAAAAATGGA +
Preference number: 3 (lower is better)
Translates to: MSSNSTSPSYEA*LPQVIAICKNG
Trigger: TCCATTTTTGCAGATAGCTATGACTTGTGGCAATCAGGCTTCGTAGCTTGGGGAGGTAGAGTTACTTGACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR GCA 72 bp GATTTCATTACAGGAAGCATTGGACTCCTAGGGAGATaGAACCTTTCTGAGGGTAATAATCATCTGCCTTGC +
Preference number: 3 (lower is better)
Translates to: DFITGSIGLLGR*NLSEGNNHLPC
Trigger: GCAAGGCAGATGATTATTACCCTCAGAAAGGTTGCATCTCCCTAGGAGTCCAATGCTTCCTGTAATGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp AGCAATCTGCTAGGGATTCACCTAAATCCTCCCACATaGTCTGGTGAGATTCAACAGAAGTGTGTCGAAATT +
Preference number: 3 (lower is better)
Translates to: SNLLGIHLNPPT*SGEIQQKCVEI
Trigger: AATTTCGACACACTTCTGTTGAATCTCACCAGACCATGTGGGAGGATTTAGGTGAATCCCTAGCAGATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTTTTCGTCAGCATTCTaGAACGGAGCGCCCTGGAGT +
Preference number: 3 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTFSSAF*NGAPWS
Trigger: ACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCAAAGACTGGATGCCTaGGAGGGGACTTCTGAGTTC +
Preference number: 3 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTQRLDA*EGTSEF
Trigger: GAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAACACCTCATTCCTCACTaGGTATCTGGACACACTCAG +
Preference number: 3 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQHLIPH*VSGHTQ
Trigger: CTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTG...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR TCA 72 bp TCTGAGATCAAGAATCCCACAGTGAGAGCTAGGATTTaGAGGTATCCAGAGATTGCAAACTCTGTGACTAAC +
Preference number: 3 (lower is better)
Translates to: SEIKNPTVRARI*RYPEIANSVTN
Trigger: GTTAGTCACAGAGTTTGCAATCTCTGGATACCTTCAAATCCTAGCTCTCACTGTGGGATTCTTGATCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR GCA 72 bp CTGGTTGTTGAATTCATGACCCAAGTCAAATTAATCTaGTGCAAGAATAATTGCGATTACTCCAGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: LVVEFMTQVKLI*CKNNCDYSSRG
Trigger: CCCTCTGCTGGAGTAATCGCAATTATTCTTGCAGCAGATTAATTTGACTTGGGTCATGAATTCAACAACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CAA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTCCACTATGTTTGCCATaGGACTTAAAAATGATTGGC +
Preference number: 3 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPPLCLP*DLKMIG
Trigger: GCCAATCATTTTTAAGTCCAATGGCAAACATAGTGG...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR GCA 72 bp CCTTTAGGGAGGACATTGGTTTATAGTAAACAGGTTTaGCTCATCAGAAGTGAATATGGATATTGCTACACA +
Preference number: 3 (lower is better)
Translates to: PLGRTLVYSKQV*LIRSEYGYCYT
Trigger: TGTGTAGCAATATCCATATTCACTTCTGATGAGGCAAACCTGTTTACTATAAACCAATGTCCTCCCTAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CCA 72 bp TTGCATATGCAATCAATTCCTGATTCACCTAGTTCTTaGCAGGAAGAGAAAATACTCGTTAATCAGAGGACT +
Preference number: 3 (lower is better)
Translates to: LHMQSIPDSPSS*QEEKILVNQRT
Trigger: AGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATTGCATATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CCA 72 bp GTAACAACTGGTCAGAGGAGTAACAACAAATGGTCATaGACATCAATGATATGGTTAGAAAGTTCAAGCAGA +
Preference number: 3 (lower is better)
Translates to: VTTGQRSNNKWS*TSMIWLESSSR
Trigger: TCTGCTTGAACTTTCTAACCATATCATTGATGTCCATGACCATTTGTTGTTACTCCTCTGACCAGTTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR-3UTR CAA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAACAAGACTTTGGATATaGCTTTTCGTCAGCATTCTT +
Preference number: 3 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQTRLWI*LFVSIL
Trigger: AAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCCCACTATGTTTGCCATaGGACTTAAAAATGATTGGC +
Preference number: 3 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIPLCLP*DLKMIG
Trigger: GCCAATCATTTTTAAGTCCAATGGCAAACATAGTGG...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATCCATCAAATAGGAAATaGGTAAAGGTGGTGAAAAAG +
Preference number: 3 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDPSNRK*VKVVKK
Trigger: CTTTTTCACCACCTTTACCAATTTCCTATTTGATGG...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR-3UTR CAA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTACAAGACTTTGGATATaGCTTTTCGTCAGCATTCTT +
Preference number: 3 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILTRLWI*LFVSIL
Trigger: AAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGT...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTCGGGCGCTGCGCTCCTaGTCTCGCCGGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPRALRS*SRRWLR
Trigger: GCGCAGCCACCGGCGAGATCAGGAGCGCAGCGCCCG...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTGCGCGCGAATCCAGCTaGAGCCGCTGCTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPARESS*SRCCPA
Trigger: CGCAGGGCAGCAGCGGCTGCAGCTGGATTCGCGCGC...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTCCCCGCGGGCGTCCTaGTTGGGCGAGTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPSPRAS*LGECSP
Trigger: CGGAGAGCACTCGCCCAAGCAGGACGCCCGCGGGGA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCCGGTTCCCTCAGGCTaGGGGCGCTGCGCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPPVPSG*GRCAPD
Trigger: ATCAGGAGCGCAGCGCCCGCAGCCTGAGGGAACCGG...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTGGGCTATCCAGTTCTTaGCGCGGGTCGGGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPGLSSS*RGSGRR
Trigger: TCGCCGCCCCGACCCGCGGCAAGAACTGGATAGCCC...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTCGGGCTTGGGGACAGTaGGAGCGAGCAGGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPRAWGQ*ERAGRA
Trigger: CGCTCTGCCTGCTCGCTCCCACTGTCCCCAAGCCCG...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTGCGGAGGAGTCCTaGTGCCGAGCGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPLAEES*CRASCS
Trigger: GGAGCAGGACGCTCGGCAGCAGGACTCCTCCGCAAG...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR TCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCCGCGTGGGGCATGGTaGTGGTCTCGTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPPRGAW*WSRWCW
Trigger: CCAACACCAACGAGACCATCACCATGCCCCACGCGG...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGGGGGGCCCACGAACTTaGAGGGTGGCGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWGGPRT*RVAALR
Trigger: GCGCAGGGCCGCCACCCTGCAAGTTCGTGGGCCCCC...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGCAGCCGCTGCTGCCCTaGGCCGGTTCCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWQPLLP*AGSLRL
Trigger: CAGCCTGAGGGAACCGGCGCAGGGCAGCAGCGGCTG...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGTATCCTGGACCACCTaGAAGGCTCCCACAGTCCGG +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPVSWTT*KAPTVR
Trigger: CCGGACTGTGGGAGCCTTGCAGGTGGTCCAGGATAC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGCAGCAGGACCTCCTTaGGGTCAGATCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPAAGPP*GQICQP
Trigger: AGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGGGCCGAGCTGGCCATaGCCACCTCCCCGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWGPSWP*PPPRGR
Trigger: ACGCCCGCGGGGAGGTGGTCATGGCCAGCTCGGCCC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp GTCTCTTCTTTGGGGGAGGTAAAGAAGGCTATAAGGAAGGGCTGTTCCCCTTTCGGGCCGAGCTGGCCATaGCCACCTCCCCGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: VSSLGEVKKAIRKGCSPFGPSWP*PPPRGR
Trigger: ACGCCCGCGGGGAGGTGGTCATGGCCAGCTCGGCCC...GAAAGGGGAACAGCCCTTCCTTATAGCCTTCTTTACCTCCCCCAAAGAAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGTGCTGCCGAGCGTCCTaGTCCTTCGCCCGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWCCRAS*SFARLR
Trigger: GCGAAGCCGGGCGAAGGAGCAGGACGCTCGGCAGCA...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTCTTCTACACCCGCGTaGGGCATGGTGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPSSTPA*GMVMVS
Trigger: CGAGACCATCACCATGCCCCACGCGGGTGTAGAAGA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTATGGGGTCTGTATCCTaGACCACCTGCAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPMGSVS*TTCKAP
Trigger: GGGAGCCTTGCAGGTGGTCCAGGATACAGACCCCAT...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CAA 72 bp ATGGCAAAGGCTCAGGGGGTTTGCAGCAGGACCTCCTaGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: MAKAQGVCSRTS*GSDLPASGWPF
Trigger: GAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGCAAACCCCCTGAGCCTTTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTAGTTGCCCTTGGGGATaGGGGCTATCCAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPSCPWG*GLSSSC
Trigger: GCAAGAACTGGATAGCCCTCATCCCCAAGGGCAACT...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTCGCGGGCGTCCTGCTTaGGCGAGTGCTCTCCGTAGC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSARGRPA*ASALRS
Trigger: GCTACGGAGAGCACTCGCCCAAGCAGGACGCCCGCG...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACAGGCCAGGCGGTCGTaGGCCGAGCTGGCCATGACC +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEQARRS*AELAMT
Trigger: GGTCATGGCCAGCTCGGCCCACGACCGCCTGGCCTG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTCTTGCGGAGGAGTCCTaGTGCCGAGCGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSALAEES*CRASCS
Trigger: GGAGCAGGACGCTCGGCAGCAGGACTCCTCCGCAAG...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTGCAGAAGTAAGGGCTGCTGACAGTGAGAAGATCTGTGGGGTCTCCTTCAGCCTCTCCTCCTGCTGCTaGTCACTCCCGGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: FAEVRAADSEKICGVSFSLSSCC*SLPGRR
Trigger: CCTCCGGCCCGGGAGTGAGCAGCAGCAGGAGGAGAG...GCTGAAGGAGACCCCACAGATCTTCTCACTGTCAGCAGCCCTTACTTCTGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGCCATGCACACTTCATaGTGGGAGGTCAAGACCACA +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPAMHTS*WEVKTT
Trigger: TGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGTCCCCACATTACCCTaGTTCTCCAAGCCTGTCACT +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPVPTLP*FSKPVT
Trigger: AGTGACAGGCTTGGAGAAGCAGGGTAATGTGGGGAC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCTTCCGGGCGAGCGGATaGCGCTGGCCCCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGFRASG*RWPLPL
Trigger: GAGGGGAAGGGGCCAGCGCCATCCGCTCGCCCGGAA...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCTCTTCTTTGGGGGAGGTAAAGAAGGCTATAAGGAAGGGCTGTTCCCCTTTCTTCCGGGCGAGCGGATaGCGCTGGCCCCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VSSLGEVKKAIRKGCSPFFRASG*RWPLPL
Trigger: GAGGGGAAGGGGCCAGCGCCATCCGCTCGCCCGGAA...GAAAGGGGAACAGCCCTTCCTTATAGCCTTCTTTACCTCCCCCAAAGAAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACATGCTGCGGTGCGGGGTaGTGCCCAGGGTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATCCGAG*CPGCPG
Trigger: GCCGGGACACCCTGGGCAGCACCCCGCACCGCAGCA...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCTCTTCTTTGGGGGAGGTAAAGAAGGCTATAAGGAAGGGCTGTTCCCCTTTCCGGGCTTGGGGACAGTaGGAGCGAGCAGGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: VSSLGEVKKAIRKGCSPFRAWGQ*ERAGRA
Trigger: CGCTCTGCCTGCTCGCTCCCACTGTCCCCAAGCCCG...GAAAGGGGAACAGCCCTTCCTTATAGCCTTCTTTACCTCCCCCAAAGAAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCTCAGCTGTAGCGCGGTaGTTGCATTTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPSAVAR*LHFASW
Trigger: CCAAGAAGCAAAATGCAACCACCGCGCTACAGCTGA...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGAAGATGACCACGGCTaGGGCGTTCTGCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAEDDHG*GVLQER
Trigger: GCGTTCCTGCAGAACGCCTCAGCCGTGGTCATCTTC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTGCTAGTATTCTCCGTTaGCCTGCACACCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPASILR*PAHHVS
Trigger: TGAAACATGGTGTGCAGGTCAACGGAGAATACTAGC...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACAGCGCGCGAATCCAGCTaGAGCCGCTGCTGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATARESS*SRCCPA
Trigger: CGCAGGGCAGCAGCGGCTGCAGCTGGATTCGCGCGC...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTGCAGAAGTAAGGGCTGCTGACAGTGAGAAGATCTGTGGGGTCTCCTTCAGCGCGGTGGTTGCATTTTaGTTCTTGGGCGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: FAEVRAADSEKICGVSFSAVVAF*FLGARG
Trigger: CCCCCGGGCGCCCAAGAAGCAAAATGCAACCACCGC...GCTGAAGGAGACCCCACAGATCTTCTCACTGTCAGCAGCCCTTACTTCTGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGTCCCCGCGGGCGTCCTaGTTGGGCGAGTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWSPRAS*LGECSP
Trigger: CGGAGAGCACTCGCCCAAGCAGGACGCCCGCGGGGA...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTACGGCTGAGGCGTTCTaGAGGAACGCGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSATAEAF*RNAFRI
Trigger: GATCCGGAACGCGTTCCTGCAGAACGCCTCAGCCGT...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTATTCTCCGTTGACCTaGACACCATGTTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPYSPLT*TPCFSR
Trigger: CCTGCTGAAACATGGTGTGCAGGTCAACGGAGAATA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCTCCGGACAACGTCATTaGGCTTGTACCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPSGQRH*ACTLQY
Trigger: GTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGA...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTCCGGACAACGTCATTaGGCTTGTACCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPSGQRH*ACTLQY
Trigger: GTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGATCTGGTTGGTGGGTaGACCTCCCAGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSADLVGG*TSQRAL
Trigger: GAGGGCTCTCTGGGAGGTCCACCCACCAACCAGATC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTCTGCCAGCCTCGGGTTaGCCTTTCAGACCCCTCATC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSALPASG*PFRPLI
Trigger: GATGAGGGGTCTGAAAGGCCAACCCGAGGCTGGCAG...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCCCGCGTGGGGCATGGTaGTGGTCTCGTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGPRGAW*WSRWCW
Trigger: CCAACACCAACGAGACCATCACCATGCCCCACGCGG...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGCCGCGTGGGGCATGGTaGTGGTCTCGTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWPRGAW*WSRWCW
Trigger: CCAACACCAACGAGACCATCACCATGCCCCACGCGG...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGTGTCAGGGCAGTAACTaGAATGGCCACTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWCQGSN*NGHWAW
Trigger: CCATGCCCAGTGGCCATTTCAGTTACTGCCCTGACA...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTGCGGTGCGGGGTaGTGCCCAGGGTGTCCCGGC +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWCCGAG*CPGCPG
Trigger: GCCGGGACACCCTGGGCAGCACCCCGCACCGCAGCA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACATGCTGCCGAGCGTCCTaGTCCTTCGCCCGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATCCRAS*SFARLR
Trigger: GCGAAGCCGGGCGAAGGAGCAGGACGCTCGGCAGCA...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGGGGCTATCCAGTTCTTaGCGCGGGTCGGGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWGLSSS*RGSGRR
Trigger: TCGCCGCCCCGACCCGCGGCAAGAACTGGATAGCCC...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAGGAGCGCCCTGGAGTTaGCAAGGTGATCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLGAPWS*QGDLEV
Trigger: CACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCC...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAGGAGCGCCCTGGAGTTaGCAAGGTGATCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEGAPWS*QGDLEV
Trigger: CACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCC...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGATGGCTTTCTTTGCTaGATCCCCCAGTCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSADGFLC*IPQSAL
Trigger: CAGCGCCGACTGGGGGATGCAGCAAAGAAAGCCATC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACAGCGAGCGGATGGCGCTaGCCCCTTCCCCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATASGWR*PLPLSA
Trigger: AGCTGAGAGGGGAAGGGGCCAGCGCCATCCGCTCGC...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTGTTCATCTTGCACATaGGACAGGTACGATGGTCTA +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPCSSCT*DRYDGL
Trigger: TAGACCATCGTACCTGTCCCATGTGCAAGATGAACA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGAGCCCTCGAAGTCAGTaGGCAAGTCGTCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWSPRSQ*ASRPCS
Trigger: ACTGCATGGACGACTTGCCCACTGACTTCGAGGGCT...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACTGGCACCTGTGATCTaGTTGGTGGGTGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSELAPVI*LVGGPP
Trigger: GGGAGGTCCACCCACCAACCAGATCACAGGTGCCAG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTATGACGTCTCCCTCCTaGGGGATGGGGTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAMTSPS*GMGSVS
Trigger: GGATACAGACCCCATCCCCCAGGAGGGAGACGTCAT...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGTTGAACGGAGCGCCCTaGAGTTGCCAAGGTGATCTG +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWLNGAP*SCQGDL
Trigger: CAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAA...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTATGCACACTTCATGCTaGGAGGTCAAGACCACATAT +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPMHTSC*EVKTTY
Trigger: ATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCAT...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTAAATCCTCCCACATaGTCTGGTGAGATTCAACAG +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPLNPPT*SGEIQQ
Trigger: CTGTTGAATCTCACCAGACCATGTGGGAGGATTTAG...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTTCCCCCAGTCGGCGCTaGTTCCTATCCCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSASPSRR*FLSLAF
Trigger: AAATGCCAGGGATAGGAACCAGCGCCGACTGGGGGA...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTGCAACTGGCAATTGCTaGTTATTGTCTGCAGTCTAC +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPATGNC*LLSAVY
Trigger: GTAGACTGCAGACAATAACCAGCAATTGCCAGTTGC...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTGGGCCGAGCTGGCCATaGCCACCTCCCCGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPGPSWP*PPPRGR
Trigger: ACGCCCGCGGGGAGGTGGTCATGGCCAGCTCGGCCC...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAGCTGATGGCTTTCTTTaGTGCATCCCCCAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLADGFL*CIPQSA
Trigger: CGCCGACTGGGGGATGCAGCAAAGAAAGCCATCAGC...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGGAGCGCCCTGGAGTTaGCAAGGTGATCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWGAPWS*QGDLEV
Trigger: CACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGTTTCAACTTCCCAGCTaGCAAGGCCACAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWFQLPS*QGHRLP
Trigger: TGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAA...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGCCGCAGCCTGGTGTTTaGCAGCTGTGTAGAGATAAG +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWPQPGV*QLCRDK
Trigger: CTTATCTCTACACAGCTGGCAAACACCAGGCTGCGG...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAGAGGCATCCTGTAAGTaGAGCTGTGGCCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEEASCK*SCGQGL
Trigger: CAAGCCCTGGCCACAGCTGCACTTACAGGATGCCTC...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCCCTTGGGGTCAGATCTaGCAGCCTCGGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGPWGQI*QPRVGL
Trigger: AAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGG...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAGATGGCTTTCTTTGCTaGATCCCCCAGTCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLDGFLC*IPQSAL
Trigger: CAGCGCCGACTGGGGGATGCAGCAAAGAAAGCCATC...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCTCTAGCATCTGGACTTaGTTCATTAGTTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPSSIWT*FISSGM
Trigger: CATCCCAGAACTAATGAAGCAAGTCCAGATGCTAGA...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGGCCGCCACTGAGCGCTaGGGCGCGCGAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWAATER*GARIQL
Trigger: CAGCTGGATTCGCGCGCCCCAGCGCTCAGTGGCGGC...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGCGCGGGCGTCCTGCTTaGGCGAGTGCTCTCCGTAGC +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRRGRPA*ASALRS
Trigger: GCTACGGAGAGCACTCGCCCAAGCAGGACGCCCGCG...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGTCGGGGCGGCGAACTTaGTGTTGGGGTCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWSGRRT*CWGRRP
Trigger: TGGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGA...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGTCGGGGCGGCGAACTTaGTGTTGGGGTCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQSGRRT*CWGRRP
Trigger: TGGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGA...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGATCTGGTTGGTGGGTaGACCTCCCAGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWDLVGG*TSQRAL
Trigger: GAGGGCTCTCTGGGAGGTCCACCCACCAACCAGATC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTTTGAACGGAGCGCCCTaGAGTTGCCAAGGTGATCTG +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSALNGAP*SCQGDL
Trigger: CAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAA...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGCAGCAGGACCTCCTTaGGGTCAGATCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWAAGPP*GQICQP
Trigger: AGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGCGGGCGCTGCGCTCCTaGTCTCGCCGGTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRRALRS*SRRWLR
Trigger: GCGCAGCCACCGGCGAGATCAGGAGCGCAGCGCCCG...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR TCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTACTGGAGTTGCCAAGGTaGTCTGGAGGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLLELPR*SGGVCV
Trigger: CACACACACACCTCCAGATCACCTTGGCAACTCCAG...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACTGGAGTTGCCAAGGTaGTCTGGAGGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSELELPR*SGGVCV
Trigger: CACACACACACCTCCAGATCACCTTGGCAACTCCAG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGTCCATTTCAGGGTGCTaGGGCACTTCTCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWSISGC*GTSQSH
Trigger: ATGGCTTTGAGAAGTGCCTCAGCACCCTGAAATGGA...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTGCAATAACATCCTACTaGACAGTAAGTACCATGGAT +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPAITSY*TVSTMD
Trigger: ATCCATGGTACTTACTGTTCAGTAGGATGTTATTGC...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTGATCTCGCCGGTGGCTaGGCCTGGGCACGCACTTGC +
Preference number: 4 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPDLAGG*AWARTC
Trigger: GCAAGTGCGTGCCCAGGCGCAGCCACCGGCGAGATC...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTTCCAGCTGCAGCCGCTaGTGCCCTGCGCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPSSCSR*CPAPVP
Trigger: GGGAACCGGCGCAGGGCAGCAGCGGCTGCAGCTGGA...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCGCTGATGGCTTTCTTTaGTGCATCCCCCAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGADGFL*CIPQSA
Trigger: CGCCGACTGGGGGATGCAGCAAAGAAAGCCATCAGC...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTACTGGAGGTGTGTGTGTaGCTGGTCCAAGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLLEVCV*LVQVLE
Trigger: CTCCAAGACTTGGACCAGGCACACACACACCTCCAG...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCGAGGCATCCTGTAAGTaGAGCTGTGGCCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGEASCK*SCGQGL
Trigger: CAAGCCCTGGCCACAGCTGCACTTACAGGATGCCTC...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTCAGGCCAGGCGGTCGTaGGCCGAGCTGGCCATGACC +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPQARRS*AELAMT
Trigger: GGTCATGGCCAGCTCGGCCCACGACCGCCTGGCCTG...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTGAAGCAAGTGTGATGTaGCTTAAAATAACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPEASVM*LKITSS
Trigger: ACTGCTGGTTATTTTAAGCCACATCACACTTGCTTC...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACCTTCTCATGTCACGTaGGCCCTTAATCAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEPSHVT*ALNQAR
Trigger: CCGGGCTTGATTAAGGGCCCACGTGACATGAGAAGG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCTCCCCCAGTCGGCGCTaGTTCCTATCCCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGSPSRR*FLSLAF
Trigger: AAATGCCAGGGATAGGAACCAGCGCCGACTGGGGGA...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTCGGGCTCGGCGTAGGTaGTGTTCACGAAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTRARRR*CSRRRC
Trigger: ACACCGCCTTCGTGAACATCACCTACGCCGAGCCCG...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR TCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGGAAGATGACCACGGCTaGGGCGTTCTGCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQEDDHG*GVLQER
Trigger: GCGTTCCTGCAGAACGCCTCAGCCGTGGTCATCTTC...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACATGTCGCTGGCACCTGTaGTCTGGTTGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATCRWHL*SGWWVD
Trigger: GTCCACCCACCAACCAGATCACAGGTGCCAGCGACA...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTATTTCGTCAGCATTCTTaGACGGAGCGCCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLFRQHS*TERPGV
Trigger: AACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAA...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGTTTCAGTATTTACTTaGTACCTCTTTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPVSVFT*YLFSFP
Trigger: GGGAAAGGAAAAGAGGTATCAAGTAAATACTGAAAC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACAGCCGCTGCTGCCCTaGGCCGGTTCCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIQPLLP*AGSLRL
Trigger: CAGCCTGAGGGAACCGGCGCAGGGCAGCAGCGGCTG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATTCCAGCTGCAGCCGCTaGTGCCCTGCGCCGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDSSCSR*CPAPVP
Trigger: GGGAACCGGCGCAGGGCAGCAGCGGCTGCAGCTGGA...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTCGTAGTCTGGGGTGCTaGGGTGCGGGGTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPRSLGC*GAGCCP
Trigger: TGGGCAGCACCCCGCACCGCAGCACCCCAGACTACG...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGGGGGGCCCACGAACTTaGAGGGTGGCGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRGGPRT*RVAALR
Trigger: GCGCAGGGCCGCCACCCTGCAAGTTCGTGGGCCCCC...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGCGGTGGTTGCATTTTaGTTCTTGGGCGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTAVVAF*FLGARG
Trigger: CCCCCGGGCGCCCAAGAAGCAAAATGCAACCACCGC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTCGCTGCCTCTCCTCCTaGTGCTGCTCACTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPRCLSS*CCSLPG
Trigger: GCCCGGGAGTGAGCAGCAGCAGGAGGAGAGGCAGCG...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGGTATCCTGGACCACCTaGAAGGCTCCCACAGTCCGG +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWVSWTT*KAPTVR
Trigger: CCGGACTGTGGGAGCCTTGCAGGTGGTCCAGGATAC...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGCCTTGGGGTCAGATCTaGCAGCCTCGGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWPWGQI*QPRVGL
Trigger: AAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGG...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGCCATCATCTACTACCTaGAGACTAGCCAGAAAGACC +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWPSSTT*RLARKT
Trigger: GGTCTTTCTGGCTAGTCTGCAGGTAGTAGATGATGG...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAGCCGCCACTGAGCGCTaGGGCGCGCGAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQAATER*GARIQL
Trigger: CAGCTGGATTCGCGCGCCCCAGCGCTCAGTGGCGGC...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGCGGCGAACTTGGTGTTaGGGTCGCAGGCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWRRTWC*GRRPGG
Trigger: ACCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCG...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGGATCTGGTTGGTGGGTaGACCTCCCAGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWDLVGG*TSQRAL
Trigger: GAGGGCTCTCTGGGAGGTCCACCCACCAACCAGATC...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGCTGGCACCTGTGATCTaGTTGGTGGGTGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWLAPVI*LVGGPP
Trigger: GGGAGGTCCACCCACCAACCAGATCACAGGTGCCAG...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCTTGAACGGAGCGCCCTaGAGTTGCCAAGGTGATCTG +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGLNGAP*SCQGDL
Trigger: CAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAA...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGAAAGACTGGATGCCTTaGAGGGGACTTCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWKDWMP*RGLLSS
Trigger: TGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTT...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGGAAACCAATGCAACTaGCATTTTGTTTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPGNQCN*HFVFNR
Trigger: CCTATTGAAAACAAAATGCCAGTTGCATTGGTTTCC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTATCCTCACTTGGTATCTaGACACACTCAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLSSLGI*THSGSP
Trigger: AGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGA...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGGCTGGTTCCTATCCCTaGCATTTGCATATCGAAACC +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWAGSYP*HLHIET
Trigger: GGTTTCGATATGCAAATGCCAGGGATAGGAACCAGC...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAATCCATGCAATGGCATaGATGAAGGACCTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEIHAMA*MKDLGG
Trigger: GCCACCGAGGTCCTTCATCCATGCCATTGCATGGAT...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTTGTACATTGTCACGGTaGTGTTTCTTTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSACTLSR*CFFPAG
Trigger: GCCTGCTGGAAAGAAACATCACCGTGACAATGTACA...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTTGTCGCTGGCACCTGTaGTCTGGTTGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTCRWHL*SGWWVD
Trigger: GTCCACCCACCAACCAGATCACAGGTGCCAGCGACA...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTTTCCTCCCAAGTTCGTaGGTTTTCACTACAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAFLPSS*VFTTAV
Trigger: CACAGCTGTAGTGAAAACTCACGAACTTGGGAGGAA...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCCAAGTAGAGACCGGATaGTCACAGGCCCCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGQVETG*SQAPKD
Trigger: ATCTTTGGGGGCCTGTGATCATCCGGTCTCTACTTG...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATATCAGGCTGCGGGCGCTaGGCTCCTGATCTCGCCGGT +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMISGCGR*APDLAG
Trigger: ACCGGCGAGATCAGGAGCGCAGCGCCCGCAGCCTGA...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTTCAGGCTGCGGGCGCTaGGCTCCTGATCTCGCCGGT +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPSGCGR*APDLAG
Trigger: ACCGGCGAGATCAGGAGCGCAGCGCCCGCAGCCTGA...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAGCTGCAGCCGCTGCTaGCCTGCGCCGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDSCSRC*PAPVPS
Trigger: TGAGGGAACCGGCGCAGGGCAGCAGCGGCTGCAGCT...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATGCTCGTAGTCTGGGGTaGTGCGGTGCGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDARSLG*CGAGCC
Trigger: GCAGCACCCCGCACCGCAGCACCCCAGACTACGAGC...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAGCTCGTAGTCTGGGGTaGTGCGGTGCGGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIARSLG*CGAGCC
Trigger: GCAGCACCCCGCACCGCAGCACCCCAGACTACGAGC...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTCGCTGCCTCTCCTCCTaGTGCTGCTCACTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPRCLSS*CCSLPG
Trigger: GCCCGGGAGTGAGCAGCAGCAGGAGGAGAGGCAGCG...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTCCCCGCGGGCGTCCTaGTTGGGCGAGTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTSPRAS*LGECSP
Trigger: CGGAGAGCACTCGCCCAAGCAGGACGCCCGCGGGGA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGACGGCTGAGGCGTTCTaGAGGAACGCGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRTAEAF*RNAFRI
Trigger: GATCCGGAACGCGTTCCTGCAGAACGCCTCAGCCGT...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGCTTACAGCTGGCTCCTaGTCACTGTTAGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWLTAGS*SLLVVK
Trigger: CTTTACTACTAACAGTGAGCAGGAGCCAGCTGTAAG...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGGAGCGCCCTGGAGTTaGCAAGGTGATCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTGAPWS*QGDLEV
Trigger: CACCTCCAGATCACCTTGGCAACTCCAGGGCGCTCC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGTTTCAACTTCCCAGCTaGCAAGGCCACAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWFQLPS*QGHRLP
Trigger: TGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAA...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGCCATGCACACTTCATaGTGGGAGGTCAAGACCACA +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWAMHTS*WEVKTT
Trigger: TGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCAATAATCATCTGCCTTaGCTTACTGTCTACTTACAA +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPNNHLP*LTVYLQ
Trigger: TTGTAAGTAGACAGTAAGGCAAGGCAGATGATTATT...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACACGAACTTGCAGGGTaGCGGCCCTGCGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIHELAG*RPCALQ
Trigger: CTGGAGGGCGCAGGGCCGCCACCCTGCAAGTTCGTG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTATCAGCTGTAGCGCGGTaGTTGCATTTTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLSAVAR*LHFASW
Trigger: CCAAGAAGCAAAATGCAACCACCGCGCTACAGCTGA...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTCGCGGGCGTCCTGCTTaGGCGAGTGCTCTCCGTAGC +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPRGRPA*ASALRS
Trigger: GCTACGGAGAGCACTCGCCCAAGCAGGACGCCCGCG...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCCAGGCCAGGCGGTCGTaGGCCGAGCTGGCCATGACC +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIQARRS*AELAMT
Trigger: GGTCATGGCCAGCTCGGCCCACGACCGCCTGGCCTG...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCTCTTCTTTGGGGGAGGTAAAGAAGGCTATAAGGAAGGGCTGTTCCCCTTTCTCAACACAGGACTTGTaGAAAAGATGCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VSSLGEVKKAIRKGCSPFSTQDL*KRCRQG
Trigger: GCCCTGCCGGCATCTTTTCCACAAGTCCTGTGTTGA...GAAAGGGGAACAGCCCTTCCTTATAGCCTTCTTTACCTCCCCCAAAGAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTCTCCCTCCTGGGGGATaGGGTCTGTATCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTLPPGG*GLYPGP
Trigger: TGGTCCAGGATACAGACCCCATCCCCCAGGAGGGAG...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGCTCCCTCCTGGGGGATaGGGTCTGTATCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRLPPGG*GLYPGP
Trigger: TGGTCCAGGATACAGACCCCATCCCCCAGGAGGGAG...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACAATGACGTCTCCCTCCTaGGGGATGGGGTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATMTSPS*GMGSVS
Trigger: GGATACAGACCCCATCCCCCAGGAGGGAGACGTCAT...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCTCTTCTTTGGGGGAGGTAAAGAAGGCTATAAGGAAGGGCTGTTCCCCTTTCAGGTGTGTGTGTGCCTaGTCCAAGTCTTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: VSSLGEVKKAIRKGCSPFRCVCA*SKSWST
Trigger: AGTGCTCCAAGACTTGGACCAGGCACACACACACCT...GAAAGGGGAACAGCCCTTCCTTATAGCCTTCTTTACCTCCCCCAAAGAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCAACCTATACAAAAGCTaGAGTGCATCAAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPNLYKS*SASKEK
Trigger: TTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTT...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGACAGCCAGAGGAGCTTaGGGACTCATGTTATTAAAC +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWTARGA*GLMLLN
Trigger: GTTTAATAACATGAGTCCCCAAGCTCCTCTGGCTGT...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAATGCAGCACGCTTGGATaGGAGACATTGCCATCTTTA +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSECSTLG*ETLPSL
Trigger: TAAAGATGGCAATGTCTCTCATCCAAGCGTGCTGCA...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR TCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGCAACCTCCATTGCCATaGTCAAGGAAATGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWQPPLP*SRKCQN
Trigger: ATTCTGACATTTCCTTGATCATGGCAATGGAGGTTG...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCTCCATTTCAGGGTGCTaGGGCACTTCTCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGSISGC*GTSQSH
Trigger: ATGGCTTTGAGAAGTGCCTCAGCACCCTGAAATGGA...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACTTGGAGGGGACTTCTaGGTTCAGAATTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSELGGDF*VQNFSQ
Trigger: TTGGCTGAAATTCTGAACTCAGAAGTCCCCTCCAAG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAATCCCACATGGTCTGGTaGGATTCAACAGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSESHMVW*DSTEVC
Trigger: ACACACTTCTGTTGAATCTCACCAGACCATGTGGGA...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCCCAAGCTACGAAGCCTaGTTGCCACAAGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGPSYEA*LPQVIA
Trigger: AGCTATGACTTGTGGCAATCAGGCTTCGTAGCTTGG...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGCATTGATTTGGTTTTaGGAGTATGGTAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAALIWF*EYGSLR
Trigger: CCTGAGGCTACCATACTCTCAAAACCAAATCAATGC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACAATGCAATGGCATGGATaGAGGACCTCGGTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATMQWHG*RTSVAK
Trigger: CTTGGCCACCGAGGTCCTTCATCCATGCCATTGCAT...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTGATCTCGCCGGTGGCTaGGCCTGGGCACGCACTTGC +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTDLAGG*AWARTC
Trigger: GCAAGTGCGTGCCCAGGCGCAGCCACCGGCGAGATC...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGCTGCAGCCGCTGCTaGCCTGCGCCGGTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLISCSRC*PAPVPS
Trigger: TGAGGGAACCGGCGCAGGGCAGCAGCGGCTGCAGCT...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATGCGGAGGAGTCCTGCTaGCGAGCGTCCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDAEESC*RASCSF
Trigger: GAAGGAGCAGGACGCTCGGCAGCAGGACTCCTCCGC...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCGGGCTATCCAGTTCTTaGCGCGGGTCGGGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIGLSSS*RGSGRR
Trigger: TCGCCGCCCCGACCCGCGGCAAGAACTGGATAGCCC...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCAAAGCTAGGTGCTACTaGAGCCCCCACTATGTTTGC +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGKARCY*SPHYVC
Trigger: GCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTT...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAAAGCTAGGTGCTACTaGAGCCCCCACTATGTTTGC +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWKARCY*SPHYVC
Trigger: GCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAAAGGTAAAAGCTAGGTaGTACTGCAGCCCCCACTAT +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLKVKAR*YCSPHY
Trigger: ATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTT...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCCGGCTCACATATTTCTaGAAGTTCCGGGTTCCGATG +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGRLTYF*KFRVPM
Trigger: CATCGGAACCCGGAACTTGCAGAAATATGTGAGCCG...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTGCAGAAGTAAGGGCTGCTGACAGTGAGAAGATCTGTGGGGTCTCCTTCAGCGGAGAGGATAGACAATaGCGAGATGGAACCATCATC +
Preference number: 4 (lower is better)
Translates to: FAEVRAADSEKICGVSFSGEDRQ*RDGTII
Trigger: GATGATGGTTCCATCTCGGCATTGTCTATCCTCTCC...GCTGAAGGAGACCCCACAGATCTTCTCACTGTCAGCAGCCCTTACTTCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCCACGAACTTGCAGGGTaGCGGCCCTGCGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIHELAG*RPCALQ
Trigger: CTGGAGGGCGCAGGGCCGCCACCCTGCAAGTTCGTG...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGGCGAGCGGATGGCGCTaGCCCCTTCCCCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRASGWR*PLPLSA
Trigger: AGCTGAGAGGGGAAGGGGCCAGCGCCATCCGCTCGC...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCAGACTGCAGCACGCTTaGATGAGAGACATTGCCATC +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGRLQHA*MRDIAI
Trigger: GATGGCAATGTCTCTCATCCAAGCGTGCTGCAGTCT...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATCGGCGAACTTGGTGTTaGGGTCGCAGGCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDRRTWC*GRRPGG
Trigger: ACCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCG...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGCTCAGGAATCATTATaGCCACGATGTCTTCTACAC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAAQESL*PRCLLH
Trigger: GTGTAGAAGACATCGTGGCCATAATGATTCCTGAGC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTTTGATGGTCCTGATCTaGAGTTTGCTGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSALMVLI*SLLMAF
Trigger: GAAAGCCATCAGCAAACTCCAGATCAGGACCATCAA...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTTGTTCATCTTGCACATaGGACAGGTACGATGGTCTA +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSACSSCT*DRYDGL
Trigger: TAGACCATCGTACCTGTCCCATGTGCAAGATGAACA...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAATCACTGCTTACAGCTaGCTCCTGCTCACTGTTAGT +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLITAYS*LLLTVS
Trigger: ACTAACAGTGAGCAGGAGCCAGCTGTAAGCAGTGAT...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAATCACTGCTTACAGCTaGCTCCTGCTCACTGTTAGT +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEITAYS*LLLTVS
Trigger: ACTAACAGTGAGCAGGAGCCAGCTGTAAGCAGTGAT...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGCCTTCTCATGTCACGTaGGCCCTTAATCAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQPSHVT*ALNQAR
Trigger: CCGGGCTTGATTAAGGGCCCACGTGACATGAGAAGG...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTACAGCCAGAGGAGCTTaGGGACTCATGTTATTAAAC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSATARGA*GLMLLN
Trigger: GTTTAATAACATGAGTCCCCAAGCTCCTCTGGCTGT...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGGAATTCTGTCCCGCGTaGGGCATGGTGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLREFCPA*GMVMVS
Trigger: CGAGACCATCACCATGCCCCACGCGGGACAGAATTC...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506101.2
CDS-3UTR CCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGCAAATATTTATCAGGTaGCCACAGAGCAAATGGCTC +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWQIFIR*PQSKWL
Trigger: GAGCCATTTGCTCTGTGGCCACCTGATAAATATTTG...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCTGTACATTGTCACGGTaGTGTTTCTTTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGCTLSR*CFFPAG
Trigger: GCCTGCTGGAAAGAAACATCACCGTGACAATGTACA...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGCAGCAGGGTCCAAAGTaGCTGAACTTTCATTCACTG +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWQQGPK*LNFHSL
Trigger: CAGTGAATGAAAGTTCAGTCACTTTGGACCCTGCTG...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGCTAGTATTCTCCGTTaGCCTGCACACCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWASILR*PAHHVS
Trigger: TGAAACATGGTGTGCAGGTCAACGGAGAATACTAGC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTCCTTCACATTATAGATaGAGAAGCCGAGGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAPSHYR*RSRGLV
Trigger: TACTAAGCCTCGGCTTCTTCATCTATAATGTGAAGG...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAGTGAGAGCTAGGATTTaGAGGTATCCAGAGATTGCA +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLVRARI*RYPEIA
Trigger: TGCAATCTCTGGATACCTTCAAATCCTAGCTCTCAC...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGCCACTAGCCACATGTaGCTATCCAAATTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWATSHM*LSKLRG
Trigger: ACCTCTCAATTTGGATAGTCACATGTGGCTAGTGGC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACAGTGGCAGGTGGATGCTaGCTTGGAGTAAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATVAGGC*LGVKCW
Trigger: CCAGCATTTTACTCCAAGTCAGCATCCACCTGCCAC...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGCTCTCCCTGTGTAGATaGCCAGAGTTGACACTGCAG +
Preference number: 4 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQLSLCR*PELTLQ
Trigger: CTGCAGTGTCAACTCTGGTCATCTACACAGGGAGAG...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGGGGTCTGGGGTTGAGTaGGGACAAAAGGAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQGSGVE*GQKEGK
Trigger: TTTTCCCTCCTTTTGTCCTCACTCAACCCCAGACCC...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTCGTAGTCTGGGGTGCTaGGGTGCGGGGTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILRSLGC*GAGCCP
Trigger: TGGGCAGCACCCCGCACCGCAGCACCCCAGACTACG...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTGCGGAGGAGTCCTGCTaGCGAGCGTCCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTAEESC*RASCSF
Trigger: GAAGGAGCAGGACGCTCGGCAGCAGGACTCCTCCGC...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTCTCTCCTCCTGCTGCTaGTCACTCCCGGGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILLSSCC*SLPGRR
Trigger: CCTCCGGCCCGGGAGTGAGCAGCAGCAGGAGGAGAG...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTTGGGCAAGTCGTCCATaGAGTCGGCATTGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPWASRP*SRHWAG
Trigger: TCCCGCCCAATGCCGACTGCATGGACGACTTGCCCA...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTGTATCCTGGACCACCTaGAAGGCTCCCACAGTCCGG +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPVSWTT*KAPTVR
Trigger: CCGGACTGTGGGAGCCTTGCAGGTGGTCCAGGATAC...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACTTACAGCTGGCTCCTaGTCACTGTTAGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSELTAGS*SLLVVK
Trigger: CTTTACTACTAACAGTGAGCAGGAGCCAGCTGTAAG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTTACCGATGGAGAAACTaGATCCTGATTGACAAGACT +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAYRWRN*ILIDKT
Trigger: AGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTA...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGGCCAAGGCCACAGACTaGCATACCGATGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQAKATD*HTDGET
Trigger: AGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGC...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGCCGCAGCCTGGTGTTTaGCAGCTGTGTAGAGATAAG +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWPQPGV*QLCRDK
Trigger: CTTATCTCTACACAGCTGGCAAACACCAGGCTGCGG...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTCCTTGGGGTCAGATCTaGCAGCCTCGGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPPWGQI*QPRVGL
Trigger: AAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGG...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCCGGCGAACTTGGTGTTaGGGTCGCAGGCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIRRTWC*GRRPGG
Trigger: ACCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCG...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTCGGGGCGGCGAACTTaGTGTTGGGGTCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTSGRRT*CWGRRP
Trigger: TGGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAGCTCAGGAATCATTATaGCCACGATGTCTTCTACAC +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLAQESL*PRCLLH
Trigger: GTGTAGAAGACATCGTGGCCATAATGATTCCTGAGC...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGTCCGGACAACGTCATTaGGCTTGTACCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWSGQRH*ACTLQY
Trigger: GTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGA...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTAGCCCTCGAAGTCAGTaGGCAAGTCGTCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTSPRSQ*ASRPCS
Trigger: ACTGCATGGACGACTTGCCCACTGACTTCGAGGGCT...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGATGACGTCTCCCTCCTaGGGGATGGGGTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWMTSPS*GMGSVS
Trigger: GGATACAGACCCCATCCCCCAGGAGGGAGACGTCAT...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCTCTTCTTTGGGGGAGGTAAAGAAGGCTATAAGGAAGGGCTGTTCCCCTTTCATCACTGCTTACAGCTaGCTCCTGCTCACTGTTAGT +
Preference number: 4 (lower is better)
Translates to: VSSLGEVKKAIRKGCSPFITAYS*LLLTVS
Trigger: ACTAACAGTGAGCAGGAGCCAGCTGTAAGCAGTGAT...GAAAGGGGAACAGCCCTTCCTTATAGCCTTCTTTACCTCCCCCAAAGAAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACACAGTCCTGGTCAGTaGAAAGTTCTACATCAGACA +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEHSPGQ*KVLHQT
Trigger: TGTCTGATGTAGAACTTTCCACTGACCAGGACTGTG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTACACAGTCCTGGTCAGTaGAAAGTTCTACATCAGACA +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLHSPGQ*KVLHQT
Trigger: TGTCTGATGTAGAACTTTCCACTGACCAGGACTGTG...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAAGACTGCCATACCGATaGAGAAACTGCATCCTGATT +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLRLPYR*RNCILI
Trigger: AATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCT...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGGAAGCAAGTGTGATGTaGCTTAAAATAACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWEASVM*LKITSS
Trigger: ACTGCTGGTTATTTTAAGCCACATCACACTTGCTTC...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGTCCTCACTTGGTATCTaGACACACTCAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWSSLGI*THSGSP
Trigger: AGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGA...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTGCAGCAGGACCTCCTTaGGGTCAGATCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPAAGPP*GQICQP
Trigger: AGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGC...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGAGTACCAGAAAAGACTaGGCTCTCGCTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQSTRKD*ALAPQR
Trigger: CCTCTGTGGAGCGAGAGCCCAGTCTTTTCTGGTACT...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CAA 72 bp AGGGATGAGCATTTACTTGGGGACAGCACGCACATTTaGTTAAGCACAGAAGCTTTCCAGCCCTGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: RDEHLLGDSTHI*LSTEAFQPCFD
Trigger: GTCAAAGCAGGGCTGGAAAGCTTCTGTGCTTAACAAAATGTGCGTGCTGTCCCCAAGTAAATGCTCATCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGCGGGCTCGGCGTAGGTaGTGTTCACGAAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRRARRR*CSRRRC
Trigger: ACACCGCCTTCGTGAACATCACCTACGCCGAGCCCG...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR TCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTTGTCGCTGGCACCTGTaGTCTGGTTGGTGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPCRWHL*SGWWVD
Trigger: GTCCACCCACCAACCAGATCACAGGTGCCAGCGACA...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACAACCTCCATTGCCATaGTCAAGGAAATGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEQPPLP*SRKCQN
Trigger: ATTCTGACATTTCCTTGATCATGGCAATGGAGGTTG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTACAACCTCCATTGCCATaGTCAAGGAAATGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLQPPLP*SRKCQN
Trigger: ATTCTGACATTTCCTTGATCATGGCAATGGAGGTTG...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCGTGAGAGCTAGGATTTaGAGGTATCCAGAGATTGCA +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGVRARI*RYPEIA
Trigger: TGCAATCTCTGGATACCTTCAAATCCTAGCTCTCAC...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGAAAAATAAACACCTCTaGGATCAAGAATCCCACAGT +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWKNKHL*DQESHS
Trigger: ACTGTGGGATTCTTGATCTCAGAGGTGTTTATTTTT...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGGGAATATGGGCATGGTaGAATCAGCTTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRGIWAW*NQLQGL
Trigger: CAGCCCCTGAAGCTGATTTCACCATGCCCATATTCC...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420921.6
CDS-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTCATTATGAGACAAGTTaGTTACGCTCTCCAAGTACA +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAHYETS*LRSPST
Trigger: TGTACTTGGAGAGCGTAATCAACTTGTCTCATAATG...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGATGGCTTTCTTTGCTaGATCCCCCAGTCGGCGATA +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTDGFLC*IPQSAI
Trigger: TATCGCCGACTGGGGGATGCAGCAAAGAAAGCCATC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306799.7
CDS-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATTGGGCAAGTCGTCCATaGAGTCGGCATTGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDWASRP*SRHWAG
Trigger: TCCCGCCCAATGCCGACTGCATGGACGACTTGCCCA...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGTCCTACTATCTCTTTaGTTCTGGATTTGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAVLLSL*FWICRF
Trigger: GAAACGACAAATCCAGAAGCAAAGAGATAGTAGGAC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTTTTCAACTTCCCAGCTaGCAAGGCCACAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTFQLPS*QGHRLP
Trigger: TGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAA...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGCCATGCACACTTCATaGTGGGAGGTCAAGACCACA +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTAMHTS*WEVKTT
Trigger: TGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGAAAGCTAGGTGCTACTaGAGCCCCCACTATGTTTGC +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWKARCY*SPHYVC
Trigger: GCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTT...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAGGTCAATCAACAGTCTaGAACAGAAAACCCCATAAG +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEGQSTV*NRKPHK
Trigger: CTTATGGGGTTTTCTGTTGCAGACTGTTGATTGACC...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAAGTAAGTACCATGGATaGCAACACAAATTCAGACCG +
Preference number: 4 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLSKYHG*QHKFRP
Trigger: CGGTCTGAATTTGTGTTGGCATCCATGGTACTTACT...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGCGATTGCTCGTAGTCTaGGGTGCTGCGGTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRRLLVV*GAAVRG
Trigger: ACCCCGCACCGCAGCACCCCAGACTACGAGCAATCG...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGTCAACACAGGACTTGTaGAAAAGATGCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRSTQDL*KRCRQG
Trigger: GCCCTGCCGGCATCTTTTCCACAAGTCCTGTGTTGA...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATCTGGCACCTGTGATCTaGTTGGTGGGTGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDLAPVI*LVGGPP
Trigger: GGGAGGTCCACCCACCAACCAGATCACAGGTGCCAG...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTATGACGTCTCCCTCCTaGGGGATGGGGTCTGTATCC +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPMTSPS*GMGSVS
Trigger: GGATACAGACCCCATCCCCCAGGAGGGAGACGTCAT...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTAGGTGTGTGTGTGCCTaGTCCAAGTCTTGGAGCACT +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTRCVCA*SKSWST
Trigger: AGTGCTCCAAGACTTGGACCAGGCACACACACACCT...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTTGAACGGAGCGCCCTaGAGTTGCCAAGGTGATCTG +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWLNGAP*SCQGDL
Trigger: CAGATCACCTTGGCAACTCCAGGGCGCTCCGTTCAA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAGACTGCCATACCGATaGAGAAACTGCATCCTGATT +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWRLPYR*RNCILI
Trigger: AATCAGGATGCAGTTTCTCCATCGGTATGGCAGTCT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGATGCACACTTCATGCTaGGAGGTCAAGACCACATAT +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWMHTSC*EVKTTY
Trigger: ATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCAT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGATTAGTCTAATGAGGTaGAAAAGTCCCCATCAATAC +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWISLMR*KSPHQY
Trigger: GTATTGATGGGGACTTTTCCACCTCATTAGACTAAT...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACCCACACATAGAGAGTaGATTTCATTACAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEPTHRE*ISLQEA
Trigger: TGCTTCCTGTAATGAAATCCACTCTCTATGTGTGGG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAAGCTATCTGCAAAAATaGATCCTGCCTCTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSESYLQK*ILPLKD
Trigger: GTCTTTCAGAGGCAGGATCCATTTTTGCAGATAGCT...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATCTGCCAGCCTCGGGTTaGCCTTTCAGACCCCTCATC +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDLPASG*PFRPLI
Trigger: GATGAGGGGTCTGAAAGGCCAACCCGAGGCTGGCAG...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAGCAGCAGGACCTCCTTaGGGTCAGATCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIAAGPP*GQICQP
Trigger: AGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGC...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGTCTGGAGTTCTCTTTaGCTCCTAAGTGCCACATAT +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWVWSSL*LLSATY
Trigger: ATATGTGGCACTTAGGAGCCAAAGAGAACTCCAGAC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGGAAGATGACCACGGCTaGGGCGTTCTGCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQREDDHG*GVLQER
Trigger: GCGTTCCTGCAGAACGCCTCAGCCGTGGTCATCTTC...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGGAGAAACTGCATCCTaGTTGACAAGACTTTGGATA +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWGETAS*LTRLWI
Trigger: TATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGTTTCAGTATTTACTTaGTACCTCTTTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAVSVFT*YLFSFP
Trigger: GGGAAAGGAAAAGAGGTATCAAGTAAATACTGAAAC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTTTAGATCACTGGCATTaGTTTGGTTTTGAGAGTATG +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSALDHWH*FGFESM
Trigger: CATACTCTCAAAACCAAATCAATGCCAGTGATCTAA...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTGCCAAGAGCACTGCATaGAGAACCATGCATCCCCAT +
Preference number: 4 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPAKSTA*RTMHPH
Trigger: ATGGGGATGCATGGTTCTTCATGCAGTGCTCTTGGC...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGTTACTTCCTGCAGGGTaGCACTCCCATCCCATTTTA +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWLLPAG*HSHPIL
Trigger: TAAAATGGGATGGGAGTGTCACCCTGCAGGAAGTAA...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTACGGCTGAGGCGTTCTaGAGGAACGCGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTTAEAF*RNAFRI
Trigger: GATCCGGAACGCGTTCCTGCAGAACGCCTCAGCCGT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTGCTGATGGCTTTCTTTaGTGCATCCCCCAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPADGFL*CIPQSA
Trigger: CGCCGACTGGGGGATGCAGCAAAGAAAGCCATCAGC...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTGGGCAAGTCGTCCATaGAGTCGGCATTGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTWASRP*SRHWAG
Trigger: TCCCGCCCAATGCCGACTGCATGGACGACTTGCCCA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCTGGGCAAGTCGTCCATaGAGTCGGCATTGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIWASRP*SRHWAG
Trigger: TCCCGCCCAATGCCGACTGCATGGACGACTTGCCCA...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGTCTAGCAAATTCTCATaGTGCATACTTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: HVTWALNQARQVEASVMWSSKFS*CILFGS
Trigger: TGAACCAAAAAGTATGCAGCATGAGAATTTGCTAGA...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAGAGGCATCCTGTAAGTaGAGCTGTGGCCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQEASCK*SCGQGL
Trigger: CAAGCCCTGGCCACAGCTGCACTTACAGGATGCCTC...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCCCTTGGGGTCAGATCTaGCAGCCTCGGGTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIPWGQI*QPRVGL
Trigger: AAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGG...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCATAAAAGACGAGCCATaGGAGGGAAATGATCATCAG +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGIKDEP*EGNDHQ
Trigger: CTGATGATCATTTCCCTCGCATGGCTCGTCTTTTAT...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACAATCAGTCCGAGGGTTTaGCATAGAAGTGAGGGGTAT +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATISPRV*HRSEGY
Trigger: ATACCCCTCACTTCTATGGCAAACCCTCGGACTGAT...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAATTTTGGACAGAGCTTTaGCTCCATGATTCTGATCAT +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEFWTEL*LHDSDH
Trigger: ATGATCAGAATCATGGAGGCAAAGCTCTGTCCAAAA...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTCCATCCCATTTTAACTaGCAACATCAAACGTATTCA +
Preference number: 4 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAPSHFN*QHQTYS
Trigger: TGAATACGTTTGATGTTGGCAGTTAAAATGGGATGG...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTGCAGAAGTAAGGGCTGCTGACAGTGAGAAGATCTGTGGGGTCTCCTTCAGCTCCCTTGCTTATAACTaGACAAACATTCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FAEVRAADSEKICGVSFSSLAYN*TNILAR
Trigger: TCTGGCTAGAATGTTTGTGCAGTTATAAGCAAGGGA...GCTGAAGGAGACCCCACAGATCTTCTCACTGTCAGCAGCCCTTACTTCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp CTATCCAAATTGAGAGGTGCTGTGAGTGTAAAAGACACAATGGATTTAGAAGACTCTTCTACACCCGCGTaGGGCATGGTGATGGTCTCG +
Preference number: 4 (lower is better)
Translates to: LSKLRGAVSVKDTMDLEDSSTPA*GMVMVS
Trigger: CGAGACCATCACCATGCCCCACGCGGGTGTAGAAGA...GTCTTCTAAATCCATTGTGTCTTTTACACTCACAGCACCTCTCAATTTGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGGATCTGGTTGGTGGGTaGACCTCCCAGAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRDLVGG*TSQRAL
Trigger: GAGGGCTCTCTGGGAGGTCCACCCACCAACCAGATC...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGCTGGCACCTGTGATCTaGTTGGTGGGTGGACCTCCC +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRLAPVI*LVGGPP
Trigger: GGGAGGTCCACCCACCAACCAGATCACAGGTGCCAG...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATATGGGGTCTGTATCCTaGACCACCTGCAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDMGSVS*TTCKAP
Trigger: GGGAGCCTTGCAGGTGGTCCAGGATACAGACCCCAT...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCCTCCCTCCTGGGGGATaGGGTCTGTATCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLILPPGG*GLYPGP
Trigger: TGGTCCAGGATACAGACCCCATCCCCCAGGAGGGAG...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTCCCTCCTGGGGGATaGGGTCTGTATCCTGGACCA +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTLPPGG*GLYPGP
Trigger: TGGTCCAGGATACAGACCCCATCCCCCAGGAGGGAG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGAAAGACTGGATGCCTTaGAGGGGACTTCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWKDWMP*RGLLSS
Trigger: TGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTT...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATATCCCCCAGTCGGCGCTaGTTCCTATCCCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMISPSRR*FLSLAF
Trigger: AAATGCCAGGGATAGGAACCAGCGCCGACTGGGGGA...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAGGAAAGCAGCCATGTTaGGAGAGCCAGACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIGKQPC*ESQTAA
Trigger: TGCTGCAGTCTGGCTCTCTCAACATGGCTGCTTTCC...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR TCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAAACTGCATCCTGATTaGCAAGACTTTGGATATTGC +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWKLHPD*QDFGYC
Trigger: GCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTTCCCACATGGTCTGGTaGGATTCAACAGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTSHMVW*DSTEVC
Trigger: ACACACTTCTGTTGAATCTCACCAGACCATGTGGGA...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGCTAGTATTCTCCGTTaGCCTGCACACCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTASILR*PAHHVS
Trigger: TGAAACATGGTGTGCAGGTCAACGGAGAATACTAGC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAAAAAATAAACACCTCTaGGATCAAGAATCCCACAGT +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEKNKHL*DQESHS
Trigger: ACTGTGGGATTCTTGATCTCAGAGGTGTTTATTTTT...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAGTCTTCTACACAGTGTaGAGTAAATTTGTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEVFYTV*SKFVWF
Trigger: AAACCACACAAATTTACTTCACACTGTGTAGAAGAC...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506101.2
CDS-3UTR TCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGGTAGATGACCAGAGTTaGCACTGCAGGGGATATCTA +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRVDDQS*HCRGYL
Trigger: TAGATATCCCCTGCAGTGTCAACTCTGGTCATCTAC...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGCTGATCATTACCATGTaGTGTCAAAAATGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWLIITM*CQKWVG
Trigger: ACCTACCCATTTTTGACATCACATGGTAATGATCAG...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTTGGATGAGAGACATTaGCATCTTTATCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWLDERH*HLYPPG
Trigger: CCCCGGCGGATAAAGATGGCAATGTCTCTCATCCAA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR GCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTTTGGATGAGAGACATTaGCATCTTTATCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPLDERH*HLYPPG
Trigger: CCCCGGCGGATAAAGATGGCAATGTCTCTCATCCAA...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGGATGGCTTTCTTTGCTaGATCCCCCAGTCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRDGFLC*IPQSAL
Trigger: CAGCGCCGACTGGGGGATGCAGCAAAGAAAGCCATC...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCATCCAAATTGAGAGGTaGTGTGAGTGTAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGIQIER*CECKRH
Trigger: GTGTCTTTTACACTCACAGCACCTCTCAATTTGGAT...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTCTTTGGCTCCTAAGTaGCACATATCAGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWSLAPK*HISVRG
Trigger: CCCTCGGACTGATATGTGGCACTTAGGAGCCAAAGA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGGGTTGTAAGATGGGTTaGGATACAACTGGTGATGTG +
Preference number: 4 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQGCKMG*DTTGDV
Trigger: CACATCACCAGTTGTATCGCAACCCATCTTACAACC...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAAGCCCTCGAAGTCAGTaGGCAAGTCGTCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQSPRSQ*ASRPCS
Trigger: ACTGCATGGACGACTTGCCCACTGACTTCGAGGGCT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTAGCCCTCGAAGTCAGTaGGCAAGTCGTCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPSPRSQ*ASRPCS
Trigger: ACTGCATGGACGACTTGCCCACTGACTTCGAGGGCT...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGATGGGGTCTGTATCCTaGACCACCTGCAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRMGSVS*TTCKAP
Trigger: GGGAGCCTTGCAGGTGGTCCAGGATACAGACCCCAT...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCATGGGGTCTGTATCCTaGACCACCTGCAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIMGSVS*TTCKAP
Trigger: GGGAGCCTTGCAGGTGGTCCAGGATACAGACCCCAT...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAACCTTCTCATGTCACGTaGGCCCTTAATCAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQPSHVT*ALNQAR
Trigger: CCGGGCTTGATTAAGGGCCCACGTGACATGAGAAGG...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTTCCTCACTTGGTATCTaGACACACTCAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPSSLGI*THSGSP
Trigger: AGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGA...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTCTGCCAGCCTCGGGTTaGCCTTTCAGACCCCTCATC +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILLPASG*PFRPLI
Trigger: GATGAGGGGTCTGAAAGGCCAACCCGAGGCTGGCAG...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGGCTGGTTCCTATCCCTaGCATTTGCATATCGAAACC +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRAGSYP*HLHIET
Trigger: GGTTTCGATATGCAAATGCCAGGGATAGGAACCAGC...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGGCCACGTCTAGCATCTaGACTTGCTTCATTAGTTCT +
Preference number: 4 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQATSSI*TCFISS
Trigger: AGAACTAATGAAGCAAGTCCAGATGCTAGACGTGGC...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CAA 72 bp ACCAACCATGAACAAGAAGAAGGGGTTGAGGTAAAGTaGGGTGATTTCAGTCTGGAGTTCTCTTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TNHEQEEGVEVK*GDFSLEFSLAP
Trigger: AGGAGCCAAAGAGAACTCCAGACTGAAATCACCCAACTTTACCTCAACCCCTTCTTCTTGTTCATGGTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CAA 72 bp GCAGGTTCTTGTAGAACAAGCAGGATTGCAATCAAATaGCTCGATATTAAGGGGCCACGTCTAGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: AGSCRTSRIAIK*LDIKGPRLASG
Trigger: TCCAGATGCTAGACGTGGCCCCTTAATATCGAGCAATTTGATTGCAATCCTGCTTGTTCTACAAGAACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGTTGCCCTTGGGGATaGGGGCTATCCAGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLISCPWG*GLSSSC
Trigger: GCAAGAACTGGATAGCCCTCATCCCCAAGGGCAACT...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTGGAGTTGCCAAGGTaGTCTGGAGGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTLELPR*SGGVCV
Trigger: CACACACACACCTCCAGATCACCTTGGCAACTCCAG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTTCAAGAATCCCACAGTaGGAGCTAGGATTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTSRIPQ*ELGFEG
Trigger: ACCTTCAAATCCTAGCTCTCACTGTGGGATTCTTGA...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGTCAAGAATCCCACAGTaGGAGCTAGGATTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRSRIPQ*ELGFEG
Trigger: ACCTTCAAATCCTAGCTCTCACTGTGGGATTCTTGA...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CTATCCAAATTGAGAGGTGCTGTGAGTGTAAAAGACACAATGGATTTAGAAGACGGTCGGGGGATCTTGTaGGAATACTGGAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LSKLRGAVSVKDTMDLEDGRGIL*EYWRNS
Trigger: AGAGTTCCTCCAGTATTCTCACAAGATCCCCCGACC...GTCTTCTAAATCCATTGTGTCTTTTACACTCACAGCACCTCTCAATTTGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTGGGCATGGTGAGCTTTaGAATGACCAAACCCAGATC +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPGHGEL*NDQTQI
Trigger: GATCTGGGTTTGGTCATTTCAAAGCTCACCATGCCC...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTTATGGCAAGGAAGCCTaGAAACATGGCAATGGTTGT +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTYGKEA*KHGNGC
Trigger: ACAACCATTGCCATGTTTTCAGGCTTCCTTGCCATA...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTGGAGGTGTGTGTGTaGCTGGTCCAAGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTLEVCV*LVQVLE
Trigger: CTCCAAGACTTGGACCAGGCACACACACACCTCCAG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAGCCAAGGCCACAGACTaGCATACCGATGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQAKATD*HTDGET
Trigger: AGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGC...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAACCGCAGCCTGGTGTTTaGCAGCTGTGTAGAGATAAG +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQPQPGV*QLCRDK
Trigger: CTTATCTCTACACAGCTGGCAAACACCAGGCTGCGG...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTCCGCAGCCTGGTGTTTaGCAGCTGTGTAGAGATAAG +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPPQPGV*QLCRDK
Trigger: CTTATCTCTACACAGCTGGCAAACACCAGGCTGCGG...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCATTATGTCTGTGACTTaGATTACGTTTCTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGIMSVT*ITFLLD
Trigger: GTCCAACAGAAACGTAATGCAAGTCACAGACATAAT...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCTCTTCTTTGGGGGAGGTAAAGAAGGCTATAAGGAAGGGCTGTTCCCCTTTCTGCTTTGCCATTATTTaGCCAGAAAACATTTATGGC +
Preference number: 4 (lower is better)
Translates to: VSSLGEVKKAIRKGCSPFCFAII*PENIYG
Trigger: GCCATAAATGTTTTCTGGGCAAATAATGGCAAAGCA...GAAAGGGGAACAGCCCTTCCTTATAGCCTTCTTTACCTCCCCCAAAGAAGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAGGTGGCCAAGAGCACTaGATGAAGAACCATGCATCC +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQGGQEH*MKNHAS
Trigger: GGATGCATGGTTCTTCATGCAGTGCTCTTGGCCACC...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGGGTTTCATTCAACCATaGAACCCACCTTCGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQGFIQP*NPPSLL
Trigger: TAAAAGCGAAGGTGGGTTGCATGGTTGAATGAAACC...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGCTCAGGAATCATTATaGCCACGATGTCTTCTACAC +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTAQESL*PRCLLH
Trigger: GTGTAGAAGACATCGTGGCCATAATGATTCCTGAGC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTTTGATGGTCCTGATCTaGAGTTTGCTGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTLMVLI*SLLMAF
Trigger: GAAAGCCATCAGCAAACTCCAGATCAGGACCATCAA...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTTCAACACAGGACTTGTaGAAAAGATGCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPSTQDL*KRCRQG
Trigger: GCCCTGCCGGCATCTTTTCCACAAGTCCTGTGTTGA...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACTATCTCTTTGCTTCTaGATTTGTCGTTTCAAGATT +
Preference number: 4 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSELSLCF*ICRFKI
Trigger: AATCTTGAAACGACAAATCCAGAAGCAAAGAGATAG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGGAAACCAATGCAACTaGCATTTTGTTTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWGNQCN*HFVFNR
Trigger: CCTATTGAAAACAAAATGCCAGTTGCATTGGTTTCC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGACCTCATTCCTCACTTaGTATCTGGACACACTCAGG +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWTSFLT*YLDTLR
Trigger: CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGT...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACAAGCTATCTGCAAAAATaGATCCTGCCTCTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATSYLQK*ILPLKD
Trigger: GTCTTTCAGAGGCAGGATCCATTTTTGCAGATAGCT...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTCATTGGGGTGGCAGGTaGATGCTGACTTGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPHWGGR*MLTWSK
Trigger: TTTACTCCAAGTCAGCATCCACCTGCCACCCCAATG...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAGATGAAGGACCTCGGTaGCCAAGAGCACTGCATGAA +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIDEGPR*PRALHE
Trigger: TTCATGCAGTGCTCTTGGCCACCGAGGTCCTTCATC...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGTTTCGTCAGCATTCTTaGACGGAGCGCCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRFRQHS*TERPGV
Trigger: AACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAA...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTTTCGTCAGCATTCTTaGACGGAGCGCCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTFRQHS*TERPGV
Trigger: AACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGAAACTGCATCCTGATTaGCAAGACTTTGGATATTGC +
Preference number: 4 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQKLHPD*QDFGYC
Trigger: GCAATATCCAAAGTCTTGTCAATCAGGATGCAGTTT...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTCTTGGAGGGGACTTCTaGGTTCAGAATTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPLGGDF*VQNFSQ
Trigger: TTGGCTGAAATTCTGAACTCAGAAGTCCCCTCCAAG...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTTCCCACATGGTCTGGTaGGATTCAACAGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPSHMVW*DSTEVC
Trigger: ACACACTTCTGTTGAATCTCACCAGACCATGTGGGA...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACCAAGCTACGAAGCCTaGTTGCCACAAGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIPSYEA*LPQVIA
Trigger: AGCTATGACTTGTGGCAATCAGGCTTCGTAGCTTGG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGTCAGCATGGTTTGTGTaGGTTTTAAGTAACAACTGG +
Preference number: 4 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQSAWFV*VLSNNW
Trigger: CCAGTTGTTACTTAAAACTCACACAAACCATGCTGA...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACACCAAACCCAGATCTATaGATTTCCAGGATATTTCAC +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATPNPDL*ISRIFH
Trigger: GTGAAATATCCTGGAAATTCATAGATCTGGGTTTGG...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTCAGATCACTTACGATaGGCAAGCACTTGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWSDHLR*ASTCAK
Trigger: CTTAGCACAAGTGCTTGCTCATCGTAAGTGATCTGA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAAGTCGGCGATATTTCTaGAAGTTCCGGGTTCCGATG +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQSRRYF*KFRVPM
Trigger: CATCGGAACCCGGAACTTGCAGAAATATCGCCGACT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306799.7
CDS-3UTR GCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCGCCAAGGCCACAGACTaGCATACCGATGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIAKATD*HTDGET
Trigger: AGTTTCTCCATCGGTATGGCAGTCTGTGGCCTTGGC...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGTCTAGCAAATTCTCATaGTGCATACTTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWSSKFS*CILFGS
Trigger: TGAACCAAAAAGTATGCAGCATGAGAATTTGCTAGA...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATAATCATCTGCCTTaGCTTACTGTCTACTTACAA +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWNNHLP*LTVYLQ
Trigger: TTGTAAGTAGACAGTAAGGCAAGGCAGATGATTATT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGAGGGTAATAATCATCTaGCTTGCCTTACTGTCTACT +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWRVIII*LALLST
Trigger: AGTAGACAGTAAGGCAAGGCAGATGATTATTACCCT...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACAAAACGTATTCATCCATaGAATGGCATGGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: FKSCIHSQGSALPKGLATKRIHP*NGMDEG
Trigger: TCCTTCATCCATGCCATTGCATGGATGAATACGTTT...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTGCAAGAATAATTaGGATTACTCCAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWCCKNN*DYSSRG
Trigger: CCCTCTGCTGGAGTAATCGCAATTATTCTTGCAGCA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTCAACACAGGACTTGTaGAAAAGATGCCGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTSTQDL*KRCRQG
Trigger: GCCCTGCCGGCATCTTTTCCACAAGTCCTGTGTTGA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTCACAGTCCTGGTCAGTaGAAAGTTCTACATCAGACA +
Preference number: 4 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPHSPGQ*KVLHQT
Trigger: TGTCTGATGTAGAACTTTCCACTGACCAGGACTGTG...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGACTTCTTCACAGTCCTaGTCAGTGGAAAGTTCTACA +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRTSSQS*SVESST
Trigger: TGTAGAACTTTCCACTGACCAGGACTGTGAAGAAGT...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGCTATCTCTTTGCTTCTaGATTTGTCGTTTCAAGATT +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWLSLCF*ICRFKI
Trigger: AATCTTGAAACGACAAATCCAGAAGCAAAGAGATAG...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAACCTATACAAAAGCTaGAGTGCATCAAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWNLYKS*SASKEK
Trigger: TTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTCCTCACTTGGTATCTaGACACACTCAGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTSSLGI*THSGSP
Trigger: AGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTACCTCATTCCTCACTTaGTATCTGGACACACTCAGG +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPTSFLT*YLDTLR
Trigger: CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGT...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTAGCTATCTGCAAAAATaGATCCTGCCTCTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTSYLQK*ILPLKD
Trigger: GTCTTTCAGAGGCAGGATCCATTTTTGCAGATAGCT...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGCTTGGAGTAAAATGCTaGCTGTTGGAGGTGGTCATA +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWLGVKC*LLEVVI
Trigger: TATGACCACCTCCAACAGCCAGCATTTTACTCCAAG...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAACAGCAGGGTCCAAAGTaGCTGAACTTTCATTCACTG +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQQQGPK*LNFHSL
Trigger: CAGTGAATGAAAGTTCAGTCACTTTGGACCCTGCTG...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTCAGCAGGGTCCAAAGTaGCTGAACTTTCATTCACTG +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPQQGPK*LNFHSL
Trigger: CAGTGAATGAAAGTTCAGTCACTTTGGACCCTGCTG...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTTTCGTCAGCATTCTTaGACGGAGCGCCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILFRQHS*TERPGV
Trigger: AACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGGGAGAAACTGCATCCTaGTTGACAAGACTTTGGATA +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWGETAS*LTRLWI
Trigger: TATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCC...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGTCCATTTCAGGGTGCTaGGGCACTTCTCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRSISGC*GTSQSH
Trigger: ATGGCTTTGAGAAGTGCCTCAGCACCCTGAAATGGA...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCTCCATTTCAGGGTGCTaGGGCACTTCTCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLISISGC*GTSQSH
Trigger: ATGGCTTTGAGAAGTGCCTCAGCACCCTGAAATGGA...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATTCCCACATGGTCTGGTaGGATTCAACAGAAGTGTGT +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDSHMVW*DSTEVC
Trigger: ACACACTTCTGTTGAATCTCACCAGACCATGTGGGA...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAGCTAGTATTCTCCGTTaGCCTGCACACCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIASILR*PAHHVS
Trigger: TGAAACATGGTGTGCAGGTCAACGGAGAATACTAGC...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGAAAAATAAACACCTCTaGGATCAAGAATCCCACAGT +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWKNKHL*DQESHS
Trigger: ACTGTGGGATTCTTGATCTCAGAGGTGTTTATTTTT...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTGATGTCTTCTACACCTaGGGAAAGGGAATATGGGCA +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPDVFYT*GKGIWA
Trigger: TGCCCATATTCCCTTTCCTCAGGTGTAGAAGACATC...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420921.6
CDS-3UTR TCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACACATATGTACTGCTTaGGAGTTTCCCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIHICTA*EFPLET
Trigger: GGTTTCCAGGGGAAACTCTCAAGCAGTACATATGTG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGATCACTAGCCCATTATaGGACAAGTTGATTACGCTC +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWITSPL*DKLITL
Trigger: GAGCGTAATCAACTTGTCTCATAATGGGCTAGTGAT...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGGTCCTACTATCTCTTTaGTTCTGGATTTGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRVLLSL*FWICRF
Trigger: GAAACGACAAATCCAGAAGCAAAGAGATAGTAGGAC...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTTTCAACTTCCCAGCTaGCAAGGCCACAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILFQLPS*QGHRLP
Trigger: TGGCAGTCTGTGGCCTTGGCAGCTGGGAAGTTGAAA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAAAGGTAAAAGCTAGGTaGTACTGCAGCCCCCACTAT +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQKVKAR*YCSPHY
Trigger: ATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTAAGGTAAAAGCTAGGTaGTACTGCAGCCCCCACTAT +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPKVKAR*YCSPHY
Trigger: ATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTT...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTTATTCTCCGTTGACCTaGACACCATGTTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPYSPLT*TPCFSR
Trigger: CCTGCTGAAACATGGTGTGCAGGTCAACGGAGAATA...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAATATTCTCCGTTGACCTaGACACCATGTTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQYSPLT*TPCFSR
Trigger: CCTGCTGAAACATGGTGTGCAGGTCAACGGAGAATA...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGCGGCTCACATATTTCTaGAAGTTCCGGGTTCCGATG +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRRLTYF*KFRVPM
Trigger: CATCGGAACCCGGAACTTGCAGAAATATGTGAGCCG...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGCATTCTGGAATTGTTaGTTTGCCATTATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTAFWNC*FAIICP
Trigger: TGGGCAAATAATGGCAAAGCAACAATTCCAGAATGC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTCTGCATGAAGAACCATaGATCCCCATCTTAAGAGGG +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPLHEEP*IPILRG
Trigger: CCCTCTTAAGATGGGGATGCATGGTTCTTCATGCAG...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTTCCGGACAACGTCATTaGGCTTGTACCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPSGQRH*ACTLQY
Trigger: GTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGA...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTCACAGTCCTGGTCAGTaGAAAGTTCTACATCAGACA +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPHSPGQ*KVLHQT
Trigger: TGTCTGATGTAGAACTTTCCACTGACCAGGACTGTG...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGGAAGCAAGTGTGATGTaGCTTAAAATAACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLREASVM*LKITSS
Trigger: ACTGCTGGTTATTTTAAGCCACATCACACTTGCTTC...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTAAAGACTGGATGCCTTaGAGGGGACTTCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPKDWMP*RGLLSS
Trigger: TGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTT...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGATTAGTCTAATGAGGTaGAAAAGTCCCCATCAATAC +
Preference number: 4 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWISLMR*KSPHQY
Trigger: GTATTGATGGGGACTTTTCCACCTCATTAGACTAAT...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGGATTCACCTAGTTCTTaGCAGGAAGAGAAAATACTC +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRDSPSS*QEEKIL
Trigger: GAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATC...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGGGAAACAGGCAATTATaGCTAAGGGATGGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWGNRQL*LRDGRK
Trigger: TTTCCTTCCATCCCTTAGCCATAATTGCCTGTTTCC...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420921.6
CDS-3UTR CCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTCCCAGAAAACATTTATaGCAAGGAAGCCTGAAAACA +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTPRKHL*QGSLKT
Trigger: TGTTTTCAGGCTTCCTTGCCATAAATGTTTTCTGGG...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGTGCAGCACGCTTGGATaGGAGACATTGCCATCTTTA +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRCSTLG*ETLPSL
Trigger: TAAAGATGGCAATGTCTCTCATCCAAGCGTGCTGCA...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR TCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGTGTACATTGTCACGGTaGTGTTTCTTTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRCTLSR*CFFPAG
Trigger: GCCTGCTGGAAAGAAACATCACCGTGACAATGTACA...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCCTTGGAGGGGACTTCTaGGTTCAGAATTTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLILGGDF*VQNFSQ
Trigger: TTGGCTGAAATTCTGAACTCAGAAGTCCCCTCCAAG...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGTTTCAGTATTTACTTaGTACCTCTTTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTVSVFT*YLFSFP
Trigger: GGGAAAGGAAAAGAGGTATCAAGTAAATACTGAAAC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTCCTTCACATTATAGATaGAGAAGCCGAGGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPPSHYR*RSRGLV
Trigger: TACTAAGCCTCGGCTTCTTCATCTATAATGTGAAGG...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTCCAAGCTACGAAGCCTaGTTGCCACAAGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILPSYEA*LPQVIA
Trigger: AGCTATGACTTGTGGCAATCAGGCTTCGTAGCTTGG...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATTCAAGAATCCCACAGTaGGAGCTAGGATTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDSRIPQ*ELGFEG
Trigger: ACCTTCAAATCCTAGCTCTCACTGTGGGATTCTTGA...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTAAAAATAAACACCTCTaGGATCAAGAATCCCACAGT +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTKNKHL*DQESHS
Trigger: ACTGTGGGATTCTTGATCTCAGAGGTGTTTATTTTT...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTCTTACAGCTGGCTCCTaGTCACTGTTAGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPLTAGS*SLLVVK
Trigger: CTTTACTACTAACAGTGAGCAGGAGCCAGCTGTAAG...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAACCTATCCCTGGCATTTaGATATCGAAACCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQPIPGI*ISKPLD
Trigger: ATCCAGAGGTTTCGATATGCAAATGCCAGGGATAGG...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACCTATCCCTGGCATTTaGATATCGAAACCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIPIPGI*ISKPLD
Trigger: ATCCAGAGGTTTCGATATGCAAATGCCAGGGATAGG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAATGCTACTGGAAATTaGCTCTGTGGCCTTAGTACC +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDNATGN*LCGLST
Trigger: GGTACTAAGGCCACAGAGGCAATTTCCAGTAGCATT...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTAAGAGGGATATAAAGTaGTCTGAAAGGAGTAGGGTA +
Preference number: 4 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPKRDIK*SERSRV
Trigger: TACCCTACTCCTTTCAGAGCACTTTATATCCCTCTT...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTAGACTGCAGCACGCTTaGATGAGAGACATTGCCATC +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILRLQHA*MRDIAI
Trigger: GATGGCAATGTCTCTCATCCAAGCGTGCTGCAGTCT...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAATTGATGGTCCTGATCTaGAGTTTGCTGATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQLMVLI*SLLMAF
Trigger: GAAAGCCATCAGCAAACTCCAGATCAGGACCATCAA...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGATCACTGCTTACAGCTaGCTCCTGCTCACTGTTAGT +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRITAYS*LLLTVS
Trigger: ACTAACAGTGAGCAGGAGCCAGCTGTAAGCAGTGAT...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAAAGACTGGATGCCTTaGAGGGGACTTCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIKDWMP*RGLLSS
Trigger: TGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTT...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGGAAACCAATGCAACTaGCATTTTGTTTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTGNQCN*HFVFNR
Trigger: CCTATTGAAAACAAAATGCCAGTTGCATTGGTTTCC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACTAAATCCTCCCACATaGTCTGGTGAGATTCAACAG +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMILNPPT*SGEIQQ
Trigger: CTGTTGAATCTCACCAGACCATGTGGGAGGATTTAG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAACAGCCAGAGGAGCTTaGGGACTCATGTTATTAAAC +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQTARGA*GLMLLN
Trigger: GTTTAATAACATGAGTCCCCAAGCTCCTCTGGCTGT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGGCTGGTTCCTATCCCTaGCATTTGCATATCGAAACC +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRAGSYP*HLHIET
Trigger: GGTTTCGATATGCAAATGCCAGGGATAGGAACCAGC...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATATGGGTGATTTCAGTCTaGAGTTCTCTTTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIWVISV*SSLWLL
Trigger: TAGGAGCCAAAGAGAACTCCAGACTGAAATCACCCA...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGTGCAGTGAAATTTCCTaGAATTCACAACCCTCATTT +
Preference number: 4 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRCSEIS*NSQPSF
Trigger: AAATGAGGGTTGTGAATTCCAGGAAATTTCACTGCA...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTGTACATTGTCACGGTaGTGTTTCTTTCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILCTLSR*CFFPAG
Trigger: GCCTGCTGGAAAGAAACATCACCGTGACAATGTACA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAAGGGTCCAAAGTGACTaGACTTTCATTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIRVQSD*TFIHCC
Trigger: ACAACAGTGAATGAAAGTTCAGTCACTTTGGACCCT...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAGGGTCCAAAGTGACTaGACTTTCATTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDRVQSD*TFIHCC
Trigger: ACAACAGTGAATGAAAGTTCAGTCACTTTGGACCCT...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACAACCTCCATTGCCATaGTCAAGGAAATGTCAGAAT +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIQPPLP*SRKCQN
Trigger: ATTCTGACATTTCCTTGATCATGGCAATGGAGGTTG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATGGAGAAACTGCATCCTaGTTGACAAGACTTTGGATA +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDGETAS*LTRLWI
Trigger: TATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCC...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CTATCCAAATTGAGAGGTGCTGTGAGTGTAAAAGACACAATGGATTTAGAAGACGGAGAAACTGCATCCTaGTTGACAAGACTTTGGATA +
Preference number: 4 (lower is better)
Translates to: LSKLRGAVSVKDTMDLEDGETAS*LTRLWI
Trigger: TATCCAAAGTCTTGTCAATCAGGATGCAGTTTCTCC...GTCTTCTAAATCCATTGTGTCTTTTACACTCACAGCACCTCTCAATTTGGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTGTGAGAGCTAGGATTTaGAGGTATCCAGAGATTGCA +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTVRARI*RYPEIA
Trigger: TGCAATCTCTGGATACCTTCAAATCCTAGCTCTCAC...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGGTGAGAGCTAGGATTTaGAGGTATCCAGAGATTGCA +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRVRARI*RYPEIA
Trigger: TGCAATCTCTGGATACCTTCAAATCCTAGCTCTCAC...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCTCAAGAATCCCACAGTaGGAGCTAGGATTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLISRIPQ*ELGFEG
Trigger: ACCTTCAAATCCTAGCTCTCACTGTGGGATTCTTGA...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCATATTTCAGACCCATTaGAGAATTCTGTCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIIFQTH*RILSRV
Trigger: CACGCGGGACAGAATTCTTCAATGGGTCTGAAATAT...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506101.2
CDS-3UTR TCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGGACCCTAAATTATTTTaGGTGAATGCAAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWDPKLF*VNANAP
Trigger: AGGAGCATTTGCATTCACTCAAAATAATTTAGGGTC...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTGTCCTACTATCTCTTTaGTTCTGGATTTGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPVLLSL*FWICRF
Trigger: GAAACGACAAATCCAGAAGCAAAGAGATAGTAGGAC...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAATACCGATGGAGAAACTaGATCCTGATTGACAAGACT +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQYRWRN*ILIDKT
Trigger: AGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTA...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTTACCGATGGAGAAACTaGATCCTGATTGACAAGACT +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPYRWRN*ILIDKT
Trigger: AGTCTTGTCAATCAGGATGCAGTTTCTCCATCGGTA...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGCCTATCCCTGGCATTTaGATATCGAAACCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRPIPGI*ISKPLD
Trigger: ATCCAGAGGTTTCGATATGCAAATGCCAGGGATAGG...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGGCTAGTCTAGACTCTTaGTATAGAAAAATGCACATC +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWASLDS*YRKMHI
Trigger: GATGTGCATTTTTCTATAGCAAGAGTCTAGACTAGC...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAACCTGATCAGAGATCCTaGCATCCTCTTTTCTTACTT +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQPDQRS*HPLFLL
Trigger: AAGTAAGAAAAGAGGATGGCAGGATCTCTGATCAGG...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTGGATTGCAATCAAATTaGTCGATATTAAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPGLQSN*SILRGH
Trigger: GTGGCCCCTTAATATCGAGCAATTTGATTGCAATCC...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAAGACCACAGATATTCTaGCAAGCAATGACTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQRPQIF*QAMTLG
Trigger: ACCCAAAGTCATTGCTTGGCAGAATATCTGTGGTCT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGGCTCAGGAATCATTATaGCCACGATGTCTTCTACAC +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRAQESL*PRCLLH
Trigger: GTGTAGAAGACATCGTGGCCATAATGATTCCTGAGC...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTGTTCATCTTGCACATaGGACAGGTACGATGGTCTA +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTCSSCT*DRYDGL
Trigger: TAGACCATCGTACCTGTCCCATGTGCAAGATGAACA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAACTTCTTCACAGTCCTaGTCAGTGGAAAGTTCTACA +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQTSSQS*SVESST
Trigger: TGTAGAACTTTCCACTGACCAGGACTGTGAAGAAGT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTACTTCTTCACAGTCCTaGTCAGTGGAAAGTTCTACA +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPTSSQS*SVESST
Trigger: TGTAGAACTTTCCACTGACCAGGACTGTGAAGAAGT...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCATGCACACTTCATGCTaGGAGGTCAAGACCACATAT +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIMHTSC*EVKTTY
Trigger: ATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCAT...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGCTAAATCCTCCCACATaGTCTGGTGAGATTCAACAG +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRLNPPT*SGEIQQ
Trigger: CTGTTGAATCTCACCAGACCATGTGGGAGGATTTAG...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAACCCACACATAGAGAGTaGATTTCATTACAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQPTHRE*ISLQEA
Trigger: TGCTTCCTGTAATGAAATCCACTCTCTATGTGTGGG...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCACAGCCAGAGGAGCTTaGGGACTCATGTTATTAAAC +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLITARGA*GLMLLN
Trigger: GTTTAATAACATGAGTCCCCAAGCTCCTCTGGCTGT...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAAGCTATCTGCAAAAATaGATCCTGCCTCTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQSYLQK*ILPLKD
Trigger: GTCTTTCAGAGGCAGGATCCATTTTTGCAGATAGCT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTGATTCACCTAGTTCTTaGCAGGAAGAGAAAATACTC +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPDSPSS*QEEKIL
Trigger: GAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATC...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCGCAATGGTTGTAAGATaGGTTGCGATACAACTGGTG +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIAMVVR*VAIQLV
Trigger: CACCAGTTGTATCGCAACCCATCTTACAACCATTGC...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTAGGGTCCAAAGTGACTaGACTTTCATTCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTRVQSD*TFIHCC
Trigger: ACAACAGTGAATGAAAGTTCAGTCACTTTGGACCCT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATTGTTTTAGGAGCTTCTaGAGTGTATGTCTACATGGA +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDCFRSF*SVCLHG
Trigger: TCCATGTAGACATACACTTCAGAAGCTCCTAAAACA...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGCCTTCACATTATAGATaGAGAAGCCGAGGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRPSHYR*RSRGLV
Trigger: TACTAAGCCTCGGCTTCTTCATCTATAATGTGAAGG...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCCTTCACATTATAGATaGAGAAGCCGAGGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTPSHYR*RSRGLV
Trigger: TACTAAGCCTCGGCTTCTTCATCTATAATGTGAAGG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATATTGCCTCATCAGAAGTaGATATGGATATTGCTACAC +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMILPHQK*IWILLH
Trigger: GTGTAGCAATATCCATATTCACTTCTGATGAGGCAA...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATTGCAGTCTACAAAACTaGGTATCACATATGTACTGC +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDCSLQN*VSHMYC
Trigger: GCAGTACATATGTGATACTCAGTTTTGTAGACTGCA...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATTCGGCAATTAAGAACTaGAGTCCAAATGAAAGACTC +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDSAIKN*SPNERL
Trigger: GAGTCTTTCATTTGGACTTCAGTTCTTAATTGCCGA...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTCTTACAGCTGGCTCCTaGTCACTGTTAGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILLTAGS*SLLVVK
Trigger: CTTTACTACTAACAGTGAGCAGGAGCCAGCTGTAAG...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTGTCCTACTATCTCTTTaGTTCTGGATTTGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPVLLSL*FWICRF
Trigger: GAAACGACAAATCCAGAAGCAAAGAGATAGTAGGAC...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTCAAGACTTTGGATATTaGTTTTCGTCAGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPQDFGY*FSSAFL
Trigger: CAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTG...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTCTAGCAAATTCTCATaGTGCATACTTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWSSKFS*CILFGS
Trigger: TGAACCAAAAAGTATGCAGCATGAGAATTTGCTAGA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAAGGGTAATAATCATCTaGCTTGCCTTACTGTCTACT +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQRVIII*LALLST
Trigger: AGTAGACAGTAAGGCAAGGCAGATGATTATTACCCT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCATAAAAGACGAGCCATaGGAGGGAAATGATCATCAG +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIIKDEP*EGNDHQ
Trigger: CTGATGATCATTTCCCTCGCATGGCTCGTCTTTTAT...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAACTGTGTTCAGACATTaGAGACCTCTTAATAGACGT +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQTVFRH*RPLNRR
Trigger: ACGTCTATTAAGAGGTCTGCAATGTCTGAACACAGT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTTTGCAACTGGCAATTaGTGGTTATTGTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTFATGN*WLLSAV
Trigger: GACTGCAGACAATAACCAGCAATTGCCAGTTGCAAA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTGTTCATCTTGCACATaGGACAGGTACGATGGTCTA +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILCSSCT*DRYDGL
Trigger: TAGACCATCGTACCTGTCCCATGTGCAAGATGAACA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTACTTCTTCACAGTCCTaGTCAGTGGAAAGTTCTACA +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTTSSQS*SVESST
Trigger: TGTAGAACTTTCCACTGACCAGGACTGTGAAGAAGT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTATGCACACTTCATGCTaGGAGGTCAAGACCACATAT +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILMHTSC*EVKTTY
Trigger: ATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCAT...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATGAAGCAAGTGTGATGTaGCTTAAAATAACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDEASVM*LKITSS
Trigger: ACTGCTGGTTATTTTAAGCCACATCACACTTGCTTC...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCCCACACATAGAGAGTaGATTTCATTACAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTPTHRE*ISLQEA
Trigger: TGCTTCCTGTAATGAAATCCACTCTCTATGTGTGGG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATGATTCACCTAGTTCTTaGCAGGAAGAGAAAATACTC +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDDSPSS*QEEKIL
Trigger: GAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATC...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGAGGAGTAACAACAAATaGTCATGGACATCAATGATA +
Preference number: 4 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWRSNNK*SWTSMI
Trigger: TATCATTGATGTCCATGACCATTTGTTGTTACTCCT...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
3UTR CAA 72 bp GAAGTGAAAATGAAACTGACTCCTTTAGGGAGGACATaGGTTTATAGTAAACAGGTTTGCCTCATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: EVKMKLTPLGRT*VYSKQVCLIRS
Trigger: ACTTCTGATGAGGCAAACCTGTTTACTATAAACCAATGTCCTCCCTAAAGGAGTCAGTTTCATTTTCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR GCA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAACAAGACTTTGGATATTaGTTTTCGTCAGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQQDFGY*FSSAFL
Trigger: CAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTG...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATCAAGACTTTGGATATTaGTTTTCGTCAGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDQDFGY*FSSAFL
Trigger: CAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTG...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTAATAATCATCTGCCTTaGCTTACTGTCTACTTACAA +
Preference number: 4 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPNNHLP*LTVYLQ
Trigger: TTGTAAGTAGACAGTAAGGCAAGGCAGATGATTATT...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTAGGGTAATAATCATCTaGCTTGCCTTACTGTCTACT +
Preference number: 4 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTRVIII*LALLST
Trigger: AGTAGACAGTAAGGCAAGGCAGATGATTATTACCCT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCATTATGGCTAAGGGATaGAAGGAAAGCAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIIMAKG*KESKHN
Trigger: ATTGTGCTTGCTTTCCTTCCATCCCTTAGCCATAAT...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420921.6
CDS-3UTR CCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAAAACATGTGTTCATTTaGATGGTGATCAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIKHVFI*MVISLW
Trigger: CCAAAGACTGATCACCATCCAAATGAACACATGTTT...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTGTTTTAGGAGCTTCTaGAGTGTATGTCTACATGGA +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILCFRSF*SVCLHG
Trigger: TCCATGTAGACATACACTTCAGAAGCTCCTAAAACA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCCAAGACTTTGGATATTaGTTTTCGTCAGCATTCTTG +
Preference number: 4 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIQDFGY*FSSAFL
Trigger: CAAGAATGCTGACGAAAAGCAATATCCAAAGTCTTG...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATTCTAGCAAATTCTCATaGTGCATACTTTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDSSKFS*CILFGS
Trigger: TGAACCAAAAAGTATGCAGCATGAGAATTTGCTAGA...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAAATAATCATCTGCCTTaGCTTACTGTCTACTTACAA +
Preference number: 4 (lower is better)
Translates to: FILSTIVVPSLKGCYYMINNHLP*LTVYLQ
Trigger: TTGTAAGTAGACAGTAAGGCAAGGCAGATGATTATT...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR GCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTAGGGTAATAATCATCTaGCTTGCCTTACTGTCTACT +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILRVIII*LALLST
Trigger: AGTAGACAGTAAGGCAAGGCAGATGATTATTACCCT...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTCTATCTCTTTGCTTCTaGATTTGTCGTTTCAAGATT +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPLSLCF*ICRFKI
Trigger: AATCTTGAAACGACAAATCCAGAAGCAAAGAGATAG...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTAACCTATACAAAAGCTaGAGTGCATCAAAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPNLYKS*SASKEK
Trigger: TTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTT...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CCA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGATTAGTCTAATGAGGTaGAAAAGTCCCCATCAATAC +
Preference number: 4 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRISLMR*KSPHQY
Trigger: GTATTGATGGGGACTTTTCCACCTCATTAGACTAAT...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR TCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTATTCTGCCAAGCAATaGCTTTGGGTAATTGAGATT +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILYSAKQ*LWVIEI
Trigger: AATCTCAATTACCCAAAGTCATTGCTTGGCAGAATA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTATTAGTCTAATGAGGTaGAAAAGTCCCCATCAATAC +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILISLMR*KSPHQY
Trigger: GTATTGATGGGGACTTTTCCACCTCATTAGACTAAT...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
3UTR CAA 72 bp ACTGCTCTACTATACCCATTAGTACAGGCAACAGTTTaGTATCTTCTTCGAAAGAGCAGGATATACTATATT +
Preference number: 4 (lower is better)
Translates to: TALLYPLVQATV*YLLRKSRIYYI
Trigger: AATATAGTATATCCTGCTCTTTCGAAGAAGATACAAAACTGTTGCCTGTACTAATGGGTATAGTAGAGCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CCA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTCTATCTCTTTGCTTCTaGATTTGTCGTTTCAAGATT +
Preference number: 4 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILLSLCF*ICRFKI
Trigger: AATCTTGAAACGACAAATCCAGAAGCAAAGAGATAG...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS CCA 90 bp GTGCGGGGTGCTGCCCAGGGTGTCCCGGCCGCCGCCACTGAGCGCTaGGGCGCGCGAATCCAGCTGCAGCCGCTGCTGCCCTGCGCCGGT +
Preference number: 5 (lower is better)
Translates to: VRGAAQGVPAAATER*GARIQLQPLLPCAG
Trigger: ACCGGCGCAGGGCAGCAGCGGCTGCAGCTGGATTCGCGCGCCCCAGCGCTCAGTGGCGGCGGCCGGGACACCCTGGGCAGCACCCCGCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS TCA 90 bp CTGCTGCCCTGCGCCGGTTCCCTCAGGCTGCGGGCGCTGCGCTCCTaGTCTCGCCGGTGGCTGCGCCTGGGCACGCACTTGCCGCGGGCG +
Preference number: 5 (lower is better)
Translates to: LLPCAGSLRLRALRS*SRRWLRLGTHLPRA
Trigger: CGCCCGCGGCAAGTGCGTGCCCAGGCGCAGCCACCGGCGAGATCAGGAGCGCAGCGCCCGCAGCCTGAGGGAACCGGCGCAGGGCAGCAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS TCA 90 bp TGCTGCGGTGCGGGGTGCTGCCCAGGGTGTCCCGGCCGCCGCCACTaGGCGCTGGGGCGCGCGAATCCAGCTGCAGCCGCTGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: CCGAGCCPGCPGRRH*ALGRANPAAAAAAL
Trigger: CAGGGCAGCAGCGGCTGCAGCTGGATTCGCGCGCCCCAGCGCTCAGTGGCGGCGGCCGGGACACCCTGGGCAGCACCCCGCACCGCAGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS GCA 90 bp GTTCCCTCAGGCTGCGGGCGCTGCGCTCCTGATCTCGCCGGTGGCTaGGCCTGGGCACGCACTTGCCGCGGGCGGGGCGGGCTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: VPSGCGRCAPDLAGG*AWARTCRGRGGLGD
Trigger: GTCCCCAAGCCCGCCCCGCCCGCGGCAAGTGCGTGCCCAGGCGCAGCCACCGGCGAGATCAGGAGCGCAGCGCCCGCAGCCTGAGGGAAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS CCA 90 bp TCAGGCTGCGGGCGCTGCGCTCCTGATCTCGCCGGTGGCTGCGCCTaGGCACGCACTTGCCGCGGGCGGGGCGGGCTTGGGGACAGTGGG +
Preference number: 5 (lower is better)
Translates to: SGCGRCAPDLAGGCA*ARTCRGRGGLGDSG
Trigger: CCCACTGTCCCCAAGCCCGCCCCGCCCGCGGCAAGTGCGTGCCCAGGCGCAGCCACCGGCGAGATCAGGAGCGCAGCGCCCGCAGCCTGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS GCA 90 bp TGCAGCCGCTGCTGCCCTGCGCCGGTTCCCTCAGGCTGCGGGCGCTaGGCTCCTGATCTCGCCGGTGGCTGCGCCTGGGCACGCACTTGC +
Preference number: 5 (lower is better)
Translates to: CSRCCPAPVPSGCGR*APDLAGGCAWARTC
Trigger: GCAAGTGCGTGCCCAGGCGCAGCCACCGGCGAGATCAGGAGCGCAGCGCCCGCAGCCTGAGGGAACCGGCGCAGGGCAGCAGCGGCTGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS GCA 90 bp GAATCCAGCTGCAGCCGCTGCTGCCCTGCGCCGGTTCCCTCAGGCTaGGGGCGCTGCGCTCCTGATCTCGCCGGTGGCTGCGCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ESSCSRCCPAPVPSG*GRCAPDLAGGCAWA
Trigger: TGCCCAGGCGCAGCCACCGGCGAGATCAGGAGCGCAGCGCCCGCAGCCTGAGGGAACCGGCGCAGGGCAGCAGCGGCTGCAGCTGGATTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS TCA 90 bp TGGTGTTGGGGTCGCAGGCCAGGCGGTCGTGGGCCGAGCTGGCCATaGCCACCTCCCCGCGGGCGTCCTGCTTGGGCGAGTGCTCTCCGT +
Preference number: 5 (lower is better)
Translates to: WCWGRRPGGRGPSWP*PPPRGRPAWASALR
Trigger: ACGGAGAGCACTCGCCCAAGCAGGACGCCCGCGGGGAGGTGGTCATGGCCAGCTCGGCCCACGACCGCCTGGCCTGCGACCCCAACACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS-3UTR CAA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTAGGGCTATCCAGTTCTaGCCGCGGGTCGGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPRAIQF*PRVGAA
Trigger: CGCCGCCCCGACCCGCGGCAAGAACTGGATAGCCCT...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGAGGGCCCGCGGGGCTaGCGGAGGAGTCCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWEGPRG*RRSPAA
Trigger: GGCAGCAGGACTCCTCCGCAAGCCCCGCGGGCCCTC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CAA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGTCGGGGCGGCGAACTaGGTGTTGGGGTCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAVGAAN*VLGSQA
Trigger: GGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGAC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTACGTGCAGTTGCCCTaGGGGATGAGGGCTATCCAG +
Preference number: 5 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPYVQLP*GMRAIQ
Trigger: CTGGATAGCCCTCATCCCCAAGGGCAACTGCACGTA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGTGTTGGAGCCCACGTaGAAGATGACCACGGCTGAG +
Preference number: 5 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPVLEPT*KMTTAE
Trigger: CTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACAC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS GCA 90 bp ATGACGTCTCCCTCCTGGGGGATGGGGTCTGTATCCTGGACCACCTaGAAGGCTCCCACAGTCCGGACAGCAGGGTCCAAAGTGACTGAA +
Preference number: 5 (lower is better)
Translates to: MTSPSWGMGSVSWTT*KAPTVRTAGSKVTE
Trigger: TTCAGTCACTTTGGACCCTGCTGTCCGGACTGTGGGAGCCTTGCAGGTGGTCCAGGATACAGACCCCATCCCCCAGGAGGGAGACGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS-3UTR CAA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTGGGTCAACACAGGACTaGTGGAAAAGATGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPGSTQD*WKRCRQ
Trigger: CTGCCGGCATCTTTTCCACAAGTCCTGTGTTGACCC...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS CCA 90 bp GTAGTAAAGATGACGTCTCCCTCCTGGGGGATGGGGTCTGTATCCTaGACCACCTGCAAGGCTCCCACAGTCCGGACAGCAGGGTCCAAA +
Preference number: 5 (lower is better)
Translates to: VVKMTSPSWGMGSVS*TTCKAPTVRTAGSK
Trigger: TTTGGACCCTGCTGTCCGGACTGTGGGAGCCTTGCAGGTGGTCCAGGATACAGACCCCATCCCCCAGGAGGGAGACGTCATCTTTACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS-3UTR CAA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGCGGGGGCCCACGAACTaGCAGGGTGGCGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQRGPTN*QGGGPA
Trigger: CGCAGGGCCGCCACCCTGCAAGTTCGTGGGCCCCCG...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGCGGCGAACTTGGTGTaGGGGTCGCAGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWAANLV*GSQARR
Trigger: CCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCGC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAGGGCTATCCAGTTCTaGCCGCGGGTCGGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWRAIQF*PRVGAA
Trigger: CGCCGCCCCGACCCGCGGCAAGAACTGGATAGCCCT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCAAAGACTGGATGCCTaGGAGGGGACTTCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPQRLDA*EGTSEF
Trigger: GAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTG...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS GCA 90 bp TTGGTGTTGGAGCCCACGTTGAAGATGACCACGGCTGAGGCGTTCTaGAGGAACGCGTTCCGGATCTTATCCCTGTACGTGCAGTTGCCC +
Preference number: 5 (lower is better)
Translates to: LVLEPTLKMTTAEAF*RNAFRILSLYVQLP
Trigger: GGGCAACTGCACGTACAGGGATAAGATCCGGAACGCGTTCCTGCAGAACGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CCA 90 bp GCTGGCTCCTGCTCACTGTTAGTAGTAAAGATGACGTCTCCCTCCTaGGGGATGGGGTCTGTATCCTGGACCACCTGCAAGGCTCCCACA +
Preference number: 5 (lower is better)
Translates to: AGSCSLLVVKMTSPS*GMGSVSWTTCKAPT
Trigger: TGTGGGAGCCTTGCAGGTGGTCCAGGATACAGACCCCATCCCCCAGGAGGGAGACGTCATCTTTACTACTAACAGTGAGCAGGAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCTCCTTGTCACCCTTCTaGATGGTCCTGATCTGGAGT +
Preference number: 5 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPSLSPF*MVLIWS
Trigger: ACTCCAGATCAGGACCATCAAGAAGGGTGACAAGGA...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCAGCTGTGGCCAGGGCTaGCATATGCAATCAATTCCT +
Preference number: 5 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPSCGQG*HMQSIP
Trigger: AGGAATTGATTGCATATGCAAGCCCTGGCCACAGCT...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGAAAGGCTCAGGGGGTTaGCAGCAGGACCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: HVTWALNQARQVEASVMWKGSGG*QQDLLG
Trigger: CCCAAGGAGGTCCTGCTGCAAACCCCCTGAGCCTTT...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS TCA 90 bp GATGGTCTCGTTGGTGTTGGAGCCCACGTTGAAGATGACCACGGCTaGGGCGTTCTGCAGGAACGCGTTCCGGATCTTATCCCTGTACGT +
Preference number: 5 (lower is better)
Translates to: DGLVGVGAHVEDDHG*GVLQERVPDLIPVR
Trigger: ACGTACAGGGATAAGATCCGGAACGCGTTCCTGCAGAACGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CCA 90 bp TTCATTCACTGTTGTGTCGCTGGCACCTGTGATCTGGTTGGTGGGTaGACCTCCCAGAGAGCCCTCGAAGTCAGTGGGCAAGTCGTCCAT +
Preference number: 5 (lower is better)
Translates to: FIHCCVAGTCDLVGG*TSQRALEVSGQVVH
Trigger: ATGGACGACTTGCCCACTGACTTCGAGGGCTCTCTGGGAGGTCCACCCACCAACCAGATCACAGGTGCCAGCGACACAACAGTGAATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CCA 90 bp GTGACTGAACTTTCATTCACTGTTGTGTCGCTGGCACCTGTGATCTaGTTGGTGGGTGGACCTCCCAGAGAGCCCTCGAAGTCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: VTELSFTVVSLAPVI*LVGGPPREPSKSVG
Trigger: GCCCACTGACTTCGAGGGCTCTCTGGGAGGTCCACCCACCAACCAGATCACAGGTGCCAGCGACACAACAGTGAATGAAAGTTCAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS-3UTR CAA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGCGCGGTGGTTGCATTTaGCTTCTTGGGCGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWRGGCI*LLGRPG
Trigger: CCCCGGGCGCCCAAGAAGCAAAATGCAACCACCGCG...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CAA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTATCCGGACAACGTCATaGGGCTTGTACCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPIRTTS*GLYPSI
Trigger: TATTGAAGGGTACAAGCCCAATGACGTTGTCCGGAT...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGCACCTGTGATCTGGTaGGTGGGTGGACCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAAPVIW*VGGPPR
Trigger: TCTGGGAGGTCCACCCACCAACCAGATCACAGGTGC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTCCTATCCCTGGCATTaGCATATCGAAACCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPSYPWH*HIETSG
Trigger: TCCAGAGGTTTCGATATGCAAATGCCAGGGATAGGA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTTACGTGCAGTTGCCCTaGGGGATGAGGGCTATCCAG +
Preference number: 5 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAYVQLP*GMRAIQ
Trigger: CTGGATAGCCCTCATCCCCAAGGGCAACTGCACGTA...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTATCTCCTTCCCTTTaGGCTCAGGAATCATTATGG +
Preference number: 5 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPLSPSL*AQESLW
Trigger: CCATAATGATTCCTGAGCCAAAAGGGAAGGAGATAG...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCATATTTCAGACCCATaGAAGAATTCTGTCCCGCGT +
Preference number: 5 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPHISDP*KNSVPR
Trigger: ACGCGGGACAGAATTCTTCAATGGGTCTGAAATATG...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506101.2
CDS-3UTR CAA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTGACAGCACGCACATTTaGTTAAGCACAGAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPDSTHI*LSTEAF
Trigger: GAAAGCTTCTGTGCTTAACAAAATGTGCGTGCTGTC...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS TCA 90 bp CACCTGCAAGGCTCCCACAGTCCGGACAGCAGGGTCCAAAGTGACTaGACTTTCATTCACTGTTGTGTCGCTGGCACCTGTGATCTGGTT +
Preference number: 5 (lower is better)
Translates to: HLQGSHSPDSRVQSD*TFIHCCVAGTCDLV
Trigger: AACCAGATCACAGGTGCCAGCGACACAACAGTGAATGAAAGTTCAGTCACTTTGGACCCTGCTGTCCGGACTGTGGGAGCCTTGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CCA 90 bp GTATGGCAGAACTCACTGTTAGTAGTAAAGATGACGTCTCCCTCCTaGGGGATGGGGTCTGTATCCTGGACCACCTGCAAGGCTCCCACA +
Preference number: 5 (lower is better)
Translates to: VWQNSLLVVKMTSPS*GMGSVSWTTCKAPT
Trigger: TGTGGGAGCCTTGCAGGTGGTCCAGGATACAGACCCCATCCCCCAGGAGGGAGACGTCATCTTTACTACTAACAGTGAGTTCTGCCATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507500.5
CDS-3UTR CAA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGCGGGGACGGGCACGATaGCTCGTAGTCTGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQRGRAR*LVVWGA
Trigger: AGCACCCCAGACTACGAGCAATCGTGCCCGTCCCCG...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATCGGGGGCCCACGAACTaGCAGGGTGGCGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDRGPTN*QGGGPA
Trigger: CGCAGGGCCGCCACCCTGCAAGTTCGTGGGCCCCCG...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CAA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGCGCGGTGGTTGCATTTaGCTTCTTGGGCGCCCGGGG +
Preference number: 5 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQRGGCI*LLGRPG
Trigger: CCCCGGGCGCCCAAGAAGCAAAATGCAACCACCGCG...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGGCGGCGAACTTGGTGTaGGGGTCGCAGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWAANLV*GSQARR
Trigger: CCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCGC...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGGTCCTACTATCTCTTaGCTTCTGGATTTGTCGTTT +
Preference number: 5 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPGPTIS*LLDLSF
Trigger: AAACGACAAATCCAGAAGCAAAGAGATAGTAGGACC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAAAGGCTCAGGGGGTTaGCAGCAGGACCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWKGSGG*QQDLLG
Trigger: CCCAAGGAGGTCCTGCTGCAAACCCCCTGAGCCTTT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCTCTTCTTTGGGGGAGGTAAAGAAGGCTATAAGGAAGGGCTGTTCCCCTTTCAAAGGCTCAGGGGGTTaGCAGCAGGACCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: VSSLGEVKKAIRKGCSPFKGSGG*QQDLLG
Trigger: CCCAAGGAGGTCCTGCTGCAAACCCCCTGAGCCTTT...GAAAGGGGAACAGCCCTTCCTTATAGCCTTCTTTACCTCCCCCAAAGAAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGTACAGGCAACAGTTTaGTATCTTCTTCGAAAGAGC +
Preference number: 5 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPVQATV*YLLRKS
Trigger: GCTCTTTCGAAGAAGATACAAAACTGTTGCCTGTAC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAATGGTGATGGTCTCGTaGGTGTTGGAGCCCACGTTG +
Preference number: 5 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLMVMVS*VLEPTL
Trigger: CAACGTGGGCTCCAACACCAACGAGACCATCACCAT...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGTCCTTGTCACCCTTCTaGATGGTCCTGATCTGGAGT +
Preference number: 5 (lower is better)
Translates to: HVTWALNQARQVEASVMWSLSPF*MVLIWS
Trigger: ACTCCAGATCAGGACCATCAAGAAGGGTGACAAGGA...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAGGGTCAACACAGGACTaGTGGAAAAGATGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLGSTQD*WKRCRQ
Trigger: CTGCCGGCATCTTTTCCACAAGTCCTGTGTTGACCC...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAATGCCTGGTCCAAGTCTaGGAGCACTCTTCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSECLVQV*EHSSLP
Trigger: AGGAAGGGAAGAGTGCTCCAAGACTTGGACCAGGCA...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCGATGGTGATCAGTCTTaGGTTTATATAGCACACATG +
Preference number: 5 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPDGDQS*VYIAHM
Trigger: CATGTGTGCTATATAAACCAAAGACTGATCACCATC...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS TCA 90 bp GTCCAGGCAGAGCAGATGCACGAAACAAAAGGAAAGCAGCCATGTTaGGAGAGCCAGACTGCAGCACGCTTGGATGAGAGACATTGCCAT +
Preference number: 5 (lower is better)
Translates to: VQAEQMHETKGKQPC*ESQTAARLDERHCH
Trigger: ATGGCAATGTCTCTCATCCAAGCGTGCTGCAGTCTGGCTCTCTCAACATGGCTGCTTTCCTTTTGTTTCGTGCATCTGCTCTGCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000507500.5
ENST00000515673.7
CDS GCA 90 bp TACCATTCCTCCTTCTCGGCCACGGTAAAGTCCAGGCAGAGCAGATaGACGAAACAAAAGGAAAGCAGCCATGTTGAGAGAGCCAGACTG +
Preference number: 5 (lower is better)
Translates to: YHSSFSATVKSRQSR*TKQKESSHVERARL
Trigger: CAGTCTGGCTCTCTCAACATGGCTGCTTTCCTTTTGTTTCGTGCATCTGCTCTGCCTGGACTTTACCGTGGCCGAGAAGGAGGAATGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000507500.5
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATGCGGCGAACTTGGTGTaGGGGTCGCAGGCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDAANLV*GSQARR
Trigger: CCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCGC...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAGTCGGGGCGGCGAACTaGGTGTTGGGGTCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIVGAAN*VLGSQA
Trigger: GGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGAC...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGTCCCTGTACGTGCAGTaGCCCTTGGGGATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQSLYVQ*PLGMRA
Trigger: AGCCCTCATCCCCAAGGGCAACTGCACGTACAGGGA...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTATACAAACTGCACAGTaGTCAAAATCAGACTCTGTT +
Preference number: 5 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPIQTAQ*SKSDSV
Trigger: AACAGAGTCTGATTTTGACAACTGTGCAGTTTGTAT...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGGGGTCAACACAGGACTaGTGGAAAAGATGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWGSTQD*WKRCRQ
Trigger: CTGCCGGCATCTTTTCCACAAGTCCTGTGTTGACCC...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTTCTTTGCTTCTGGATTaGTCGTTTCAAGATTTCACT +
Preference number: 5 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPSLLLD*SFQDFT
Trigger: AGTGAAATCTTGAAACGACAAATCCAGAAGCAAAGA...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTATTTTCGTCAGCATTCTaGAACGGAGCGCCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLFSSAF*NGAPWS
Trigger: ACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAA...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCCTACAAGACTTTGGATATaGCTTTTCGTCAGCATTCTT +
Preference number: 5 (lower is better)
Translates to: QDLLGVRSASLGLAFQTPTRLWI*LFVSIL
Trigger: AAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGT...AGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACAAAGACTGGATGCCTaGGAGGGGACTTCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEQRLDA*EGTSEF
Trigger: GAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTCACCTCATTCCTCACTaGGTATCTGGACACACTCAG +
Preference number: 5 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAHLIPH*VSGHTQ
Trigger: CTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTG...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAACCTGCATTGTCCAATaGGCAGCCACTAGCCACATG +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSETCIVQ*AATSHM
Trigger: CATGTGGCTAGTGGCTGCCAATTGGACAATGCAGGT...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCAGGACCTCCTTGGGGTCAGATCTGCCAGCCTCGGGTTGGCCTTTCAGACCCAGTAAAGCGCTAGATTaGTTGGAAAGTTTTGAAGGA +
Preference number: 5 (lower is better)
Translates to: SRTSLGSDLPASGWPFRPSKALD*LESFEG
Trigger: TCCTTCAAAACTTTCCAACAAATCTAGCGCTTTACT...GGGTCTGAAAGGCCAACCCGAGGCTGGCAGATCTGACCCCAAGGAGGTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS CCA 90 bp TCTGTGGATGAGTCAGCCGGCAGGGCAGGATCCGGACAACGTCATTaGGCTTGTACCCTTCAATACAAACTGCACAGTTGTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: SVDESAGRAGSGQRH*ACTLQYKLHSCQNQ
Trigger: CTGATTTTGACAACTGTGCAGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGATCCTGCCCTGCCGGCTGACTCATCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515057.1
CDS-3UTR CAA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCATGGTCTCGTTGGTGTaGGAGCCCACGTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGMVSLV*EPTLKM
Trigger: CATCTTCAACGTGGGCTCCAACACCAACGAGACCAT...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTATCCTTGTCACCCTTCTaGATGGTCCTGATCTGGAGT +
Preference number: 5 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLSLSPF*MVLIWS
Trigger: ACTCCAGATCAGGACCATCAAGAAGGGTGACAAGGA...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTTCTGCCAGCCTCGGGTaGGCCTTTCAGACCCCTCAT +
Preference number: 5 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTSASLG*AFQTPH
Trigger: ATGAGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGA...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACGGGGACGGGCACGATaGCTCGTAGTCTGGGGTGCT +
Preference number: 5 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIRGRAR*LVVWGA
Trigger: AGCACCCCAGACTACGAGCAATCGTGCCCGTCCCCG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTGTCGGGGCGGCGAACTaGGTGTTGGGGTCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILVGAAN*VLGSQA
Trigger: GGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGAC...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTAGGGCTATCCAGTTCTaGCCGCGGGTCGGGGCGGCG +
Preference number: 5 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILRAIQF*PRVGAA
Trigger: CGCCGCCCCGACCCGCGGCAAGAACTGGATAGCCCT...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTGTGTTGGAGCCCACGTaGAAGATGACCACGGCTGAG +
Preference number: 5 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTVLEPT*KMTTAE
Trigger: CTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACAC...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAGTCCTGATCTGGAGTTaGCTGATGGCTTTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEVLIWS*LMAFFA
Trigger: AGCAAAGAAAGCCATCAGCAAACTCCAGATCAGGAC...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAATCCGGACAACGTCATaGGGCTTGTACCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEIRTTS*GLYPSI
Trigger: TATTGAAGGGTACAAGCCCAATGACGTTGTCCGGAT...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGTTAAGAATGTTCATCTaGCACATGGGACAGGTACGA +
Preference number: 5 (lower is better)
Translates to: HVTWALNQARQVEASVMWLRMFI*HMGQVR
Trigger: TCGTACCTGTCCCATGTGCAAGATGAACATTCTTAA...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTCAAAAGCTGTATTCATAGTCAGGGCTCAGCTCTTCCAAAGGGACTAGCCACATGCCTGGTCCAAGTCTaGGAGCACTCTTCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: FKSCIHSQGSALPKGLATCLVQV*EHSSLP
Trigger: AGGAAGGGAAGAGTGCTCCAAGACTTGGACCAGGCA...TGTGGCTAGTCCCTTTGGAAGAGCTGAGCCCTGACTATGAATACAGCTTTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTTGCAGCAGGACCTCCTaGGGGTCAGATCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPCSRTS*GSDLPA
Trigger: GGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGCA...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCGGGGTTGAGGTAAAGTaGGGTGATTTCAGTCTGGAG +
Preference number: 5 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGGVEVK*GDFSLE
Trigger: CTCCAGACTGAAATCACCCAACTTTACCTCAACCCC...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS GCA 90 bp AAGGAGATGGAGACAAACACAACCGAAGTGCGGCTCACATATTTCTaGAAGTTCCGGGTTCCGATGGTGATGTACATTGTCACGGTGATG +
Preference number: 5 (lower is better)
Translates to: KEMETNTTEVRLTYF*KFRVPMVMYIVTVM
Trigger: CATCACCGTGACAATGTACATCACCATCGGAACCCGGAACTTGCAGAAATATGTGAGCCGCACTTCGGTTGTGTTTGTCTCCATCTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515057.1
ENST00000515673.7
CDS-3UTR CAA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGCAGACTGCAGCACGCTaGGATGAGAGACATTGCCAT +
Preference number: 5 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWQTAAR*DERHCH
Trigger: ATGGCAATGTCTCTCATCCAAGCGTGCTGCAGTCTG...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGTACGTGCAGTTGCCCTaGGGGATGAGGGCTATCCAG +
Preference number: 5 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWYVQLP*GMRAIQ
Trigger: CTGGATAGCCCTCATCCCCAAGGGCAACTGCACGTA...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTTCCCTGTACGTGCAGTaGCCCTTGGGGATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPSLYVQ*PLGMRA
Trigger: AGCCCTCATCCCCAAGGGCAACTGCACGTACAGGGA...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTGCACCTGTGATCTGGTaGGTGGGTGGACCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPAPVIW*VGGPPR
Trigger: TCTGGGAGGTCCACCCACCAACCAGATCACAGGTGC...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTGGTCCTACTATCTCTTaGCTTCTGGATTTGTCGTTT +
Preference number: 5 (lower is better)
Translates to: HSSLGIWTHSGSPGKQSAGPTIS*LLDLSF
Trigger: AAACGACAAATCCAGAAGCAAAGAGATAGTAGGACC...AGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGTTTTCGTCAGCATTCTaGAACGGAGCGCCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWFSSAF*NGAPWS
Trigger: ACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAA...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGTTTTCGTCAGCATTCTaGAACGGAGCGCCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQFSSAF*NGAPWS
Trigger: ACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAA...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCAGTCTGGAGTTCTCTTaGGCTCCTAAGTGCCACATA +
Preference number: 5 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGSLEFS*APKCHI
Trigger: TATGTGGCACTTAGGAGCCAAAGAGAACTCCAGACT...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp CATGTCACGTGGGCCCTTAATCAAGCCCGGCAAGTGGAAGCAAGTGTGATGTGGGACAGCATTCTGGAATaGTTGCTTTGCCATTATTTG +
Preference number: 5 (lower is better)
Translates to: HVTWALNQARQVEASVMWDSILE*LLCHYL
Trigger: CAAATAATGGCAAAGCAACAATTCCAGAATGCTGTC...CCACATCACACTTGCTTCCACTTGCCGGGCTTGATTAAGGGCCCACGTGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTCTTTCCAGCCCTGCTTaGACCAGCTCCCTGATCAGA +
Preference number: 5 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTLSSPA*TSSLIR
Trigger: TCTGATCAGGGAGCTGGTCAAAGCAGGGCTGGAAAG...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS TCA 90 bp GGTCAGTGGAAAGTTCTACATCAGACAGTCCAACCTCCATTGCCATaGTCAAGGAAATGTCAGAATCACTGCTTACAGCTGGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: GQWKVLHQTVQPPLP*SRKCQNHCLQLAPA
Trigger: AGCAGGAGCCAGCTGTAAGCAGTGATTCTGACATTTCCTTGATCATGGCAATGGAGGTTGGACTGTCTGATGTAGAACTTTCCACTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS GCA 90 bp GTCCTGGTCAGTGGAAAGTTCTACATCAGACAGTCCAACCTCCATTaGCATGATCAAGGAAATGTCAGAATCACTGCTTACAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: VLVSGKFYIRQSNLH*HDQGNVRITAYSWL
Trigger: GAGCCAGCTGTAAGCAGTGATTCTGACATTTCCTTGATCATGGCAATGGAGGTTGGACTGTCTGATGTAGAACTTTCCACTGACCAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGCTATCTCCTTCCCTTTaGGCTCAGGAATCATTATGG +
Preference number: 5 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWLSPSL*AQESLW
Trigger: CCATAATGATTCCTGAGCCAAAAGGGAAGGAGATAG...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAACAACGTCATTGGGCTaGTACCCTTCAATACAAACT +
Preference number: 5 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLTTSLG*YPSIQT
Trigger: AGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGT...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAATTAAGAATGTTCATCTaGCACATGGGACAGGTACGA +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSELRMFI*HMGQVR
Trigger: TCGTACCTGTCCCATGTGCAAGATGAACATTCTTAA...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATGCACCTGTGATCTGGTaGGTGGGTGGACCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDAPVIW*VGGPPR
Trigger: TCTGGGAGGTCCACCCACCAACCAGATCACAGGTGC...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGCAAAGACTGGATGCCTaGGAGGGGACTTCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRQRLDA*EGTSEF
Trigger: GAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTG...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTCAAAGACTGGATGCCTaGGAGGGGACTTCTGAGTTC +
Preference number: 5 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTQRLDA*EGTSEF
Trigger: GAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTG...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGAGCTGTGGCCAGGGCTaGCATATGCAATCAATTCCT +
Preference number: 5 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQSCGQG*HMQSIP
Trigger: AGGAATTGATTGCATATGCAAGCCCTGGCCACAGCT...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATATCTGCCAGCCTCGGGTaGGCCTTTCAGACCCCTCAT +
Preference number: 5 (lower is better)
Translates to: FILSTIVVPSLKGCYYMISASLG*AFQTPH
Trigger: ATGAGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGA...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGTGCAGCAGGACCTCCTaGGGGTCAGATCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRCSRTS*GSDLPA
Trigger: GGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGCA...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAAAAGGCTCAGGGGGTTaGCAGCAGGACCTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQKGSGG*QQDLLG
Trigger: CCCAAGGAGGTCCTGCTGCAAACCCCCTGAGCCTTT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGAGGTCAGTCTCTTCTTaGGGGGAGGTAAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQRSVSS*GEVKKA
Trigger: AGCCTTCTTTACCTCCCCCAAAGAAGAGACTGACCT...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCACATACAGTCTGCATTaGCTTCTAGAGGGTACACAC +
Preference number: 5 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGTYSLH*LLEGTH
Trigger: GTGTGTACCCTCTAGAAGCAAATGCAGACTGTATGT...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCTCTTCTTTGGGGGAGGTAAAGAAGGCTATAAGGAAGGGCTGTTCCCCTTTCGTAAAATGCTGGCTGTaGGAGGTGGTCATAATTCAC +
Preference number: 5 (lower is better)
Translates to: VSSLGEVKKAIRKGCSPFVKCWL*EVVIIH
Trigger: GTGAATTATGACCACCTCCAACAGCCAGCATTTTAC...GAAAGGGGAACAGCCCTTCCTTATAGCCTTCTTTACCTCCCCCAAAGAAGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTAAGGATTGCAATCAAATaGCTCGATATTAAGGGGCCA +
Preference number: 5 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLRIAIK*LDIKGP
Trigger: TGGCCCCTTAATATCGAGCAATTTGATTGCAATCCT...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACCAGAGGCATCTTCTTaGCAAACAGAGCAACATTAT +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEPEASS*QTEQHY
Trigger: ATAATGTTGCTCTGTTTGCAAAGAAGATGCCTCTGG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATGCTGTAGCGCGGTGGTaGCATTTTGCTTCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDAVARW*HFASWA
Trigger: CGCCCAAGAAGCAAAATGCAACCACCGCGCTACAGC...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CAA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTGCTGTAGCGCGGTGGTaGCATTTTGCTTCTTGGGCG +
Preference number: 5 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPAVARW*HFASWA
Trigger: CGCCCAAGAAGCAAAATGCAACCACCGCGCTACAGC...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CAA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTAGGAAAGCAGCCATGTaGAGAGAGCCAGACTGCAGC +
Preference number: 5 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPRKAAM*REPDCS
Trigger: GCTGCAGTCTGGCTCTCTCAACATGGCTGCTTTCCT...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CAA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTCCCTGTACGTGCAGTaGCCCTTGGGGATGAGGGCT +
Preference number: 5 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTSLYVQ*PLGMRA
Trigger: AGCCCTCATCCCCAAGGGCAACTGCACGTACAGGGA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGATGGTCTCGTTGGTGTaGGAGCCCACGTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWMVSLV*EPTLKM
Trigger: CATCTTCAACGTGGGCTCCAACACCAACGAGACCAT...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCACAACGTCATTGGGCTaGTACCCTTCAATACAAACT +
Preference number: 5 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGTTSLG*YPSIQT
Trigger: AGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGT...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGACAACGTCATTGGGCTaGTACCCTTCAATACAAACT +
Preference number: 5 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWTTSLG*YPSIQT
Trigger: AGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGT...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGGCACCTGTGATCTGGTaGGTGGGTGGACCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRAPVIW*VGGPPR
Trigger: TCTGGGAGGTCCACCCACCAACCAGATCACAGGTGC...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCTACATGGACATAGGAGTGGAAATCAGCTTTCAACTTCCCAGCTGCCAAGGCGGTCCTACTATCTCTTaGCTTCTGGATTTGTCGTTT +
Preference number: 5 (lower is better)
Translates to: VYMDIGVEISFQLPSCQGGPTIS*LLDLSF
Trigger: AAACGACAAATCCAGAAGCAAAGAGATAGTAGGACC...GCCTTGGCAGCTGGGAAGTTGAAAGCTGATTTCCACTCCTATGTCCATGTAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACCACTATGTTTGCCATaGGACTTAAAAATGATTGGC +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEPLCLP*DLKMIG
Trigger: GCCAATCATTTTTAAGTCCAATGGCAAACATAGTGG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTGCAGAAGTAAGGGCTGCTGACAGTGAGAAGATCTGTGGGGTCTCCTTCAGCCCACTATGTTTGCCATaGGACTTAAAAATGATTGGC +
Preference number: 5 (lower is better)
Translates to: FAEVRAADSEKICGVSFSPLCLP*DLKMIG
Trigger: GCCAATCATTTTTAAGTCCAATGGCAAACATAGTGG...GCTGAAGGAGACCCCACAGATCTTCTCACTGTCAGCAGCCCTTACTTCTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTCACCTCATTCCTCACTaGGTATCTGGACACACTCAG +
Preference number: 5 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTHLIPH*VSGHTQ
Trigger: CTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTG...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTAGCTGTGGCCAGGGCTaGCATATGCAATCAATTCCT +
Preference number: 5 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTSCGQG*HMQSIP
Trigger: AGGAATTGATTGCATATGCAAGCCCTGGCCACAGCT...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGTCTGCCAGCCTCGGGTaGGCCTTTCAGACCCCTCAT +
Preference number: 5 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRSASLG*AFQTPH
Trigger: ATGAGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGA...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTGCAGCAGGACCTCCTaGGGGTCAGATCTGCCAGCC +
Preference number: 5 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILCSRTS*GSDLPA
Trigger: GGCTGGCAGATCTGACCCCAAGGAGGTCCTGCTGCA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACCTTTAGGGAGGACATaGGTTTATAGTAAACAGGTT +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEPLGRT*VYSKQV
Trigger: AACCTGTTTACTATAAACCAATGTCCTCCCTAAAGG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAAGGAAAGCAGCCATGTaGAGAGAGCCAGACTGCAGC +
Preference number: 5 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQRKAAM*REPDCS
Trigger: GCTGCAGTCTGGCTCTCTCAACATGGCTGCTTTCCT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CAA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAATGGTGATGGTCTCGTaGGTGTTGGAGCCCACGTTG +
Preference number: 5 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIMVMVS*VLEPTL
Trigger: CAACGTGGGCTCCAACACCAACGAGACCATCACCAT...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATGGGTCAACACAGGACTaGTGGAAAAGATGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDGSTQD*WKRCRQ
Trigger: CTGCCGGCATCTTTTCCACAAGTCCTGTGTTGACCC...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAATGCCTGGTCCAAGTCTaGGAGCACTCTTCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQCLVQV*EHSSLP
Trigger: AGGAAGGGAAGAGTGCTCCAAGACTTGGACCAGGCA...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAAACAAGACTTTGGATATaGCTTTTCGTCAGCATTCTT +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSETRLWI*LFVSIL
Trigger: AAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGT...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp ATTCCTCACTTGGTATCTGGACACACTCAGGGAGCCCTGGGAAGCAATCTGCTACCATCAAATAGGAAATaGGTAAAGGTGGTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: IPHLVSGHTQGALGSNLLPSNRK*VKVVKK
Trigger: CTTTTTCACCACCTTTACCAATTTCCTATTTGATGG...TAGCAGATTGCTTCCCAGGGCTCCCTGAGTGTGTCCAGATACCAAGTGAGGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTCTGCCAGCCTCGGGTaGGCCTTTCAGACCCCTCAT +
Preference number: 5 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILSASLG*AFQTPH
Trigger: ATGAGGGGTCTGAAAGGCCAACCCGAGGCTGGCAGA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGTGCATTACGTTTCTGTaGGACAGTGCTAGTCTAGAC +
Preference number: 5 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQCITFL*DSASLD
Trigger: GTCTAGACTAGCACTGTCCAACAGAAACGTAATGCA...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp AGCCCTACAACCACCAAAGACTGGATGCCTTGGAGGGGACTTCTGAGTTCAGAACAACTACCGAAGAAATaGTATGATGAAAGGCAAGTA +
Preference number: 5 (lower is better)
Translates to: SPTTTKDWMPWRGLLSSEQLPKK*YDERQV
Trigger: TACTTGCCTTTCATCATACAATTTCTTCGGTAGTTG...TTCTGAACTCAGAAGTCCCCTCCAAGGCATCCAGTCTTTGGTGGTTGTAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTGTGTTGGAGCCCACGTaGAAGATGACCACGGCTGAG +
Preference number: 5 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILVLEPT*KMTTAE
Trigger: CTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACAC...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTATGGTCTCGTTGGTGTaGGAGCCCACGTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPMVSLV*EPTLKM
Trigger: CATCTTCAACGTGGGCTCCAACACCAACGAGACCAT...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTATGGTGATGGTCTCGTaGGTGTTGGAGCCCACGTTG +
Preference number: 5 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTMVMVS*VLEPTL
Trigger: CAACGTGGGCTCCAACACCAACGAGACCATCACCAT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTCTATCTCCTTCCCTTTaGGCTCAGGAATCATTATGG +
Preference number: 5 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTLSPSL*AQESLW
Trigger: CCATAATGATTCCTGAGCCAAAAGGGAAGGAGATAG...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGTGCCTGGTCCAAGTCTaGGAGCACTCTTCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRCLVQV*EHSSLP
Trigger: AGGAAGGGAAGAGTGCTCCAAGACTTGGACCAGGCA...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CAAAGCCATGCACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGCAAACCAACTCCTACTaGGACTTAAAACTTCAATCA +
Preference number: 5 (lower is better)
Translates to: QSHAHFMLGGQDHISQRWQTNSY*DLKLQS
Trigger: TGATTGAAGTTTTAAGTCCAAGTAGGAGTTGGTTTG...CCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTGCATGGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTCTCATTAGGCGACTaGGGTGGTGTCCAGTTCTCC +
Preference number: 5 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTLSLGD*GGVQFS
Trigger: GGAGAACTGGACACCACCCAAGTCGCCTAATGAGAG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTTTCTTCCCCATAGCATaGGGGTGGCAGGTGGATGCT +
Preference number: 5 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTFFPIA*GWQVDA
Trigger: AGCATCCACCTGCCACCCCAATGCTATGGGGAAGAA...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS GCA 90 bp GGCATTTGCATATCGAAACCTCTGGATGTAATAAAAGACGAGCCATaGGAGGGAAATGATCATCAGGACAATGAAGGAGATGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: GICISKPLDVIKDEP*EGNDHQDNEGDGDK
Trigger: TTTGTCTCCATCTCCTTCATTGTCCTGATGATCATTTCCCTCGCATGGCTCGTCTTTTATTACATCCAGAGGTTTCGATATGCAAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515057.1
ENST00000515673.7
CDS-3UTR CAA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCAGACTGCAGCACGCTaGGATGAGAGACATTGCCAT +
Preference number: 5 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTQTAAR*DERHCH
Trigger: ATGGCAATGTCTCTCATCCAAGCGTGCTGCAGTCTG...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGCTATCTCCTTCCCTTTaGGCTCAGGAATCATTATGG +
Preference number: 5 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWLSPSL*AQESLW
Trigger: CCATAATGATTCCTGAGCCAAAAGGGAAGGAGATAG...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATATCCTTGTCACCCTTCTaGATGGTCCTGATCTGGAGT +
Preference number: 5 (lower is better)
Translates to: FILSTIVVPSLKGCYYMISLSPF*MVLIWS
Trigger: ACTCCAGATCAGGACCATCAAGAAGGGTGACAAGGA...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCTTTTCGTCAGCATTCTaGAACGGAGCGCCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIFSSAF*NGAPWS
Trigger: ACTCCAGGGCGCTCCGTTCAAGAATGCTGACGAAAA...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CCATCAGGTACAGTATACAAGTTTTTCCAAGAAATCCTAACCCTGGGGGCTCAGGAAACATGTGTTCATTaGGATGGTGATCAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: PSGTVYKFFQEILTLGAQETCVH*DGDQSL
Trigger: CAAAGACTGATCACCATCCAAATGAACACATGTTTC...CTGAGCCCCCAGGGTTAGGATTTCTTGGAAAAACTTGTATACTGTACCTGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAGTCCTGATCTGGAGTTaGCTGATGGCTTTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIVLIWS*LMAFFA
Trigger: AGCAAAGAAAGCCATCAGCAAACTCCAGATCAGGAC...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGATACAAACTGCACAGTaGTCAAAATCAGACTCTGTT +
Preference number: 5 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWIQTAQ*SKSDSV
Trigger: AACAGAGTCTGATTTTGACAACTGTGCAGTTTGTAT...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAATATGGAGAGGATAGACAATGCCGAGATGGAACCATCATCTACTACCTGCAGATACAAACTGCACAGTaGTCAAAATCAGACTCTGTT +
Preference number: 5 (lower is better)
Translates to: EYGEDRQCRDGTIIYYLQIQTAQ*SKSDSV
Trigger: AACAGAGTCTGATTTTGACAACTGTGCAGTTTGTAT...CTGCAGGTAGTAGATGATGGTTCCATCTCGGCATTGTCTATCCTCTCCATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAAATCCGGACAACGTCATaGGGCTTGTACCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQIRTTS*GLYPSI
Trigger: TATTGAAGGGTACAAGCCCAATGACGTTGTCCGGAT...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGTCTTTGCTTCTGGATTaGTCGTTTCAAGATTTCACT +
Preference number: 5 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWSLLLD*SFQDFT
Trigger: AGTGAAATCTTGAAACGACAAATCCAGAAGCAAAGA...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CACACTTCATGCTGGGAGGTCAAGACCACATATCTCAGAGATGGAATACAAACTCCACTATGTTTGCCATaGGACTTAAAAATGATTGGC +
Preference number: 5 (lower is better)
Translates to: HTSCWEVKTTYLRDGIQTPLCLP*DLKMIG
Trigger: GCCAATCATTTTTAAGTCCAATGGCAAACATAGTGG...AGTTTGTATTCCATCTCTGAGATATGTGGTCTTGACCTCCCAGCATGAAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAAATTAAGGTAAAAGCTAGGTGCTACTGCAGCCCCCACTATGTTTGCCATTGGCCATCAAATAGGAAATaGGTAAAGGTGGTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: EIKVKARCYCSPHYVCHWPSNRK*VKVVKK
Trigger: CTTTTTCACCACCTTTACCAATTTCCTATTTGATGG...CCAATGGCAAACATAGTGGGGGCTGCAGTAGCACCTAGCTTTTACCTTAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGAGCTGTGGCCAGGGCTaGCATATGCAATCAATTCCT +
Preference number: 5 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRSCGQG*HMQSIP
Trigger: AGGAATTGATTGCATATGCAAGCCCTGGCCACAGCT...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAATCCTATCCCTGGCATTaGCATATCGAAACCTCTGGA +
Preference number: 5 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQSYPWH*HIETSG
Trigger: TCCAGAGGTTTCGATATGCAAATGCCAGGGATAGGA...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGAGGCCACATAAAGTCTaGCATTTCTCATTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRRPHKV*HFSFFP
Trigger: AGGAAAGAATGAGAAATGCAAGACTTTATGTGGCCT...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCGTCCTGATCTGGAGTTaGCTGATGGCTTTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIVLIWS*LMAFFA
Trigger: AGCAAAGAAAGCCATCAGCAAACTCCAGATCAGGAC...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTATCCGGACAACGTCATaGGGCTTGTACCCTTCAATA +
Preference number: 5 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTIRTTS*GLYPSI
Trigger: TATTGAAGGGTACAAGCCCAATGACGTTGTCCGGAT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTTTAAGAATGTTCATCTaGCACATGGGACAGGTACGA +
Preference number: 5 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPLRMFI*HMGQVR
Trigger: TCGTACCTGTCCCATGTGCAAGATGAACATTCTTAA...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGACAAGACTTTGGATATaGCTTTTCGTCAGCATTCTT +
Preference number: 5 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRTRLWI*LFVSIL
Trigger: AAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGT...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp GTCAAGACCACATATCTCAGAGATGGAATACAAACTGATCATAGCAGGAACTGGCCTTTCCCTCTTACTTaGTCTATTTCAGTCAGGATA +
Preference number: 5 (lower is better)
Translates to: VKTTYLRDGIQTDHSRNWPFPLT*SISVRI
Trigger: TATCCTGACTGAAATAGACAAAGTAAGAGGGAAAGG...CCAGTTCCTGCTATGATCAGTTTGTATTCCATCTCTGAGATATGTGGTCTTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AATGATACAGCAAATCACACCTCATTCCTCACTTGGTATCTGGACACACTCAGGCAAACCAACTCCTACTaGGACTTAAAACTTCAATCA +
Preference number: 5 (lower is better)
Translates to: NDTANHTSFLTWYLDTLRQTNSY*DLKLQS
Trigger: TGATTGAAGTTTTAAGTCCAAGTAGGAGTTGGTTTG...CCTGAGTGTGTCCAGATACCAAGTGAGGAATGAGGTGTGATTTGCTGTATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTAACTCTAGACCTGCATaGTCCAATTGGCAGCCACTA +
Preference number: 5 (lower is better)
Translates to: HSCAKSQRLLLHDTCQVTNSRPA*SNWQPL
Trigger: TAGTGGCTGCCAATTGGACAATGCAGGTCTAGAGTT...AGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp GAGATGGAATACAAACTGATCATAGCAGGAACTGGTGCTTCTAAACAGAAACCTGGAAGAGTGTGGCTATaGATCTGTGGGTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: EMEYKLIIAGTGASKQKPGRVWL*ICGSLK
Trigger: TTTTAAAGACCCACAGATCAATAGCCACACTCTTCC...AGGTTTCTGTTTAGAAGCACCAGTTCCTGCTATGATCAGTTTGTATTCCATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTGTCCTGATCTGGAGTTaGCTGATGGCTTTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILVLIWS*LMAFFA
Trigger: AGCAAAGAAAGCCATCAGCAAACTCCAGATCAGGAC...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTAACTGCCAACATCAAACGTATTCATCCATGCAATGGCATGGATGAAGGACCTTTGCTTTGCCATTATTaGCCCAGAAAACATTTATGG +
Preference number: 5 (lower is better)
Translates to: LTANIKRIHPCNGMDEGPLLCHY*PRKHLW
Trigger: CCATAAATGTTTTCTGGGCAAATAATGGCAAAGCAA...AGGTCCTTCATCCATGCCATTGCATGGATGAATACGTTTGATGTTGGCAGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp CTATCCAAATTGAGAGGTGCTGTGAGTGTAAAAGACACAATGGATTTAGAAGACAGCATTCTGGAATTGTaGCTTTGCCATTATTTGCCC +
Preference number: 5 (lower is better)
Translates to: LSKLRGAVSVKDTMDLEDSILEL*LCHYLP
Trigger: GGGCAAATAATGGCAAAGCAACAATTCCAGAATGCT...GTCTTCTAAATCCATTGTGTCTTTTACACTCACAGCACCTCTCAATTTGGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTGGCAATTGCTGGTTATaGTCTGCAGTCTACAAAACT +
Preference number: 5 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPGNCWL*SAVYKT
Trigger: AGTTTTGTAGACTGCAGACAATAACCAGCAATTGCC...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCACAACGTCATTGGGCTaGTACCCTTCAATACAAACT +
Preference number: 5 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLITTSLG*YPSIQT
Trigger: AGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGT...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACCACTATGTTTGCCATaGGACTTAAAAATGATTGGC +
Preference number: 5 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIPLCLP*DLKMIG
Trigger: GCCAATCATTTTTAAGTCCAATGGCAAACATAGTGG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TGTGCCAAGTCTCAAAGGCTGTTATTACATGATACATGTCAAGTAACTCTACCTCCTTTCCCTCTTACTTaGTCTATTTCAGTCAGGATA +
Preference number: 5 (lower is better)
Translates to: CAKSQRLLLHDTCQVTLPPFPLT*SISVRI
Trigger: TATCCTGACTGAAATAGACAAAGTAAGAGGGAAAGG...AGGTAGAGTTACTTGACATGTATCATGTAATAACAGCCTTTGAGACTTGGCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCAGAGGACTAAACAACCTTTCCCTCTTACTTaGTCTATTTCAGTCAGGATA +
Preference number: 5 (lower is better)
Translates to: SPSSWQEEKILVNQRTKQPFPLT*SISVRI
Trigger: TATCCTGACTGAAATAGACAAAGTAAGAGGGAAAGG...TTGTTTAGTCCTCTGATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATAAAACAAGCAGTCCCTaGCTTATAACTGCACAAACA +
Preference number: 5 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDKTSSP*LITAQT
Trigger: TGTTTGTGCAGTTATAAGCAAGGGACTGCTTGTTTT...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTTAAGAATGTTCATCTaGCACATGGGACAGGTACGA +
Preference number: 5 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILLRMFI*HMGQVR
Trigger: TCGTACCTGTCCCATGTGCAAGATGAACATTCTTAA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CTATCCAAATTGAGAGGTGCTGTGAGTGTAAAAGACACAATGGATTTAGAAGACACAAGACTTTGGATATaGCTTTTCGTCAGCATTCTT +
Preference number: 5 (lower is better)
Translates to: LSKLRGAVSVKDTMDLEDTRLWI*LFVSIL
Trigger: AAGAATGCTGACGAAAAGCAATATCCAAAGTCTTGT...GTCTTCTAAATCCATTGTGTCTTTTACACTCACAGCACCTCTCAATTTGGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATACCATCAAATAGGAAATaGGTAAAGGTGGTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: FILSTIVVPSLKGCYYMIPSNRK*VKVVKK
Trigger: CTTTTTCACCACCTTTACCAATTTCCTATTTGATGG...TATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTTTTTGCAACTGGCAATaGCTGGTTATTGTCTGCAGT +
Preference number: 5 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILFCNWQ*LVIVCS
Trigger: ACTGCAGACAATAACCAGCAATTGCCAGTTGCAAAA...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTCATTCTCAGCACCATAGTTGTGCCAAGTCTCAAAGGCTGTTATTACATGATTTCTTTTTCACATTTTaGCAACTGGCAATTGCTGGT +
Preference number: 5 (lower is better)
Translates to: FHSQHHSCAKSQRLLLHDFFFTF*QLAIAG
Trigger: ACCAGCAATTGCCAGTTGCAAAAATGTGAAAAAGAA...ATCATGTAATAACAGCCTTTGAGACTTGGCACAACTATGGTGCTGAGAATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515673.7
CDS-3UTR CAA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCTCTTTGCTTCTGGATTaGTCGTTTCAAGATTTCACT +
Preference number: 5 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLISLLLD*SFQDFT
Trigger: AGTGAAATCTTGAAACGACAAATCCAGAAGCAAAGA...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp TTTGTCTATTTCAGTCAGGATAAACGATCTAGCAAATTCTCATGCTGCATACTTCCTTTCCCTCTTACTTaGTCTATTTCAGTCAGGATA +
Preference number: 5 (lower is better)
Translates to: FVYFSQDKRSSKFSCCILPFPLT*SISVRI
Trigger: TATCCTGACTGAAATAGACAAAGTAAGAGGGAAAGG...AAGTATGCAGCATGAGAATTTGCTAGATCGTTTATCCTGACTGAAATAGACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp AATCAATTCCTGATTCACCTAGTTCTTGGCAGGAAGAGAAAATACTCGTTAATCCCATCAAATAGGAAATaGGTAAAGGTGGTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: NQFLIHLVLGRKRKYSLIPSNRK*VKVVKK
Trigger: CTTTTTCACCACCTTTACCAATTTCCTATTTGATGG...GATTAACGAGTATTTTCTCTTCCTGCCAAGAACTAGGTGAATCAGGAATTGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS-3UTR CAA 90 bp CTTCTAAACAGAAACCTATACAAAAGCTGGAGTGCATCAAAGGAAAAACAAAGGCAAACCAACTCCTACTaGGACTTAAAACTTCAATCA +
Preference number: 5 (lower is better)
Translates to: LLNRNLYKSWSASKEKQRQTNSY*DLKLQS
Trigger: TGATTGAAGTTTTAAGTCCAAGTAGGAGTTGGTTTG...CCTTTGTTTTTCCTTTGATGCACTCCAGCTTTTGTATAGGTTTCTGTTTAGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS CCA 72 bp GCTGCCCAGGGTGTCCCGGCCGCCGCCACTGAGCGCTaGGGCGCGCGAATCCAGCTGCAGCCGCTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: AAQGVPAAATER*GARIQLQPLLP
Trigger: GGGCAGCAGCGGCTGCAGCTGGATTCGCGCGCCCCAGCGCTCAGTGGCGGCGGCCGGGACACCCTGGGCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS GCA 72 bp AGCGCTGGGGCGCGCGAATCCAGCTGCAGCCGCTGCTaGCCTGCGCCGGTTCCCTCAGGCTGCGGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: SAGARESSCSRC*PAPVPSGCGRC
Trigger: GCAGCGCCCGCAGCCTGAGGGAACCGGCGCAGGGCAGCAGCGGCTGCAGCTGGATTCGCGCGCCCCAGCGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS GCA 72 bp CCGCCGCCACTGAGCGCTGGGGCGCGCGAATCCAGCTaGAGCCGCTGCTGCCCTGCGCCGGTTCCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: PPPLSAGARESS*SRCCPAPVPSG
Trigger: GCCTGAGGGAACCGGCGCAGGGCAGCAGCGGCTGCAGCTGGATTCGCGCGCCCCAGCGCTCAGTGGCGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS TCA 72 bp GGTCGCAGGCCAGGCGGTCGTGGGCCGAGCTGGCCATaGCCACCTCCCCGCGGGCGTCCTGCTTGGGCGAGT +
Preference number: 6 (lower is better)
Translates to: GRRPGGRGPSWP*PPPRGRPAWAS
Trigger: ACTCGCCCAAGCAGGACGCCCGCGGGGAGGTGGTCATGGCCAGCTCGGCCCACGACCGCCTGGCCTGCGACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS GCA 72 bp TGCTGCCCTGCGCCGGTTCCCTCAGGCTGCGGGCGCTaGGCTCCTGATCTCGCCGGTGGCTGCGCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: CCPAPVPSGCGR*APDLAGGCAWA
Trigger: TGCCCAGGCGCAGCCACCGGCGAGATCAGGAGCGCAGCGCCCGCAGCCTGAGGGAACCGGCGCAGGGCAGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS GCA 72 bp TGCAGCCGCTGCTGCCCTGCGCCGGTTCCCTCAGGCTaGGGGCGCTGCGCTCCTGATCTCGCCGGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: CSRCCPAPVPSG*GRCAPDLAGGC
Trigger: GCAGCCACCGGCGAGATCAGGAGCGCAGCGCCCGCAGCCTGAGGGAACCGGCGCAGGGCAGCAGCGGCTGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS TCA 72 bp TGCGCCGGTTCCCTCAGGCTGCGGGCGCTGCGCTCCTaGTCTCGCCGGTGGCTGCGCCTGGGCACGCACTTG +
Preference number: 6 (lower is better)
Translates to: CAGSLRLRALRS*SRRWLRLGTHL
Trigger: CAAGTGCGTGCCCAGGCGCAGCCACCGGCGAGATCAGGAGCGCAGCGCCCGCAGCCTGAGGGAACCGGCGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS GCA 72 bp GGGAACAGAGGGCCCGCGGGGCTTGCGGAGGAGTCCTaGTGCCGAGCGTCCTGCTCCTTCGCCCGGCTTCGC +
Preference number: 6 (lower is better)
Translates to: GNRGPAGLAEES*CRASCSFARLR
Trigger: GCGAAGCCGGGCGAAGGAGCAGGACGCTCGGCAGCAGGACTCCTCCGCAAGCCCCGCGGGCCCTCTGTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306799.7
ENST00000515673.7
CDS CCA 72 bp GCGAACTTGGTGTTGGGGTCGCAGGCCAGGCGGTCGTaGGCCGAGCTGGCCATGACCACCTCCCCGCGGGCG +
Preference number: 6 (lower is better)
Translates to: ANLVLGSQARRS*AELAMTTSPRA
Trigger: CGCCCGCGGGGAGGTGGTCATGGCCAGCTCGGCCCACGACCGCCTGGCCTGCGACCCCAACACCAAGTTCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CCA 72 bp AGTTCTTGCCGCGGGTCGGGGCGGCGAACTTGGTGTTaGGGTCGCAGGCCAGGCGGTCGTGGGCCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SSCRGSGRRTWC*GRRPGGRGPSW
Trigger: CCAGCTCGGCCCACGACCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGACCCGCGGCAAGAACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp CAGTTCTTGCCGCGGGTCGGGGCGGCGAACTTGGTGTaGGGGTCGCAGGCCAGGCGGTCGTGGGCCGAGCTG +
Preference number: 6 (lower is better)
Translates to: QFLPRVGAANLV*GSQARRSWAEL
Trigger: CAGCTCGGCCCACGACCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGACCCGCGGCAAGAACTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 90 bp GGGATGAGGGCTATCCAGTTCTTGCCGCGGGTCGGGGCGGCGAACTaGGTGTTGGGGTCGCAGGCCAGGCGGTCGTGGGCCGAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: GMRAIQFLPRVGAAN*VLGSQARRSWAELA
Trigger: GGCCAGCTCGGCCCACGACCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGACCCGCGGCAAGAACTGGATAGCCCTCATCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CCA 72 bp CTATCCAGTTCTTGCCGCGGGTCGGGGCGGCGAACTTaGTGTTGGGGTCGCAGGCCAGGCGGTCGTGGGCCG +
Preference number: 6 (lower is better)
Translates to: LSSSCRGSGRRT*CWGRRPGGRGP
Trigger: CGGCCCACGACCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGACCCGCGGCAAGAACTGGATAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp GCTATCCAGTTCTTGCCGCGGGTCGGGGCGGCGAACTaGGTGTTGGGGTCGCAGGCCAGGCGGTCGTGGGCC +
Preference number: 6 (lower is better)
Translates to: AIQFLPRVGAAN*VLGSQARRSWA
Trigger: GGCCCACGACCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGACCCGCGGCAAGAACTGGATAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 90 bp AGGGCTATCCAGTTCTTGCCGCGGGTCGGGGCGGCGAACTTGGTGTaGGGGTCGCAGGCCAGGCGGTCGTGGGCCGAGCTGGCCATGACC +
Preference number: 6 (lower is better)
Translates to: RAIQFLPRVGAANLV*GSQARRSWAELAMT
Trigger: GGTCATGGCCAGCTCGGCCCACGACCGCCTGGCCTGCGACCCCAACACCAAGTTCGCCGCCCCGACCCGCGGCAAGAACTGGATAGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS GCA 72 bp CCCTCCTGGGGGATGGGGTCTGTATCCTGGACCACCTaGAAGGCTCCCACAGTCCGGACAGCAGGGTCCAAA +
Preference number: 6 (lower is better)
Translates to: PSWGMGSVSWTT*KAPTVRTAGSK
Trigger: TTTGGACCCTGCTGTCCGGACTGTGGGAGCCTTGCAGGTGGTCCAGGATACAGACCCCATCCCCCAGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CCA 72 bp TGGTGGGTGGACCTCCCAGAGAGCCCTCGAAGTCAGTaGGCAAGTCGTCCATGCAGTCGGCATTGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: WWVDLPESPRSQ*ASRPCSRHWAG
Trigger: TCCCGCCCAATGCCGACTGCATGGACGACTTGCCCACTGACTTCGAGGGCTCTCTGGGAGGTCCACCCACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 90 bp TGCAGGAACGCGTTCCGGATCTTATCCCTGTACGTGCAGTTGCCCTaGGGGATGAGGGCTATCCAGTTCTTGCCGCGGGTCGGGGCGGCG +
Preference number: 6 (lower is better)
Translates to: CRNAFRILSLYVQLP*GMRAIQFLPRVGAA
Trigger: CGCCGCCCCGACCCGCGGCAAGAACTGGATAGCCCTCATCCCCAAGGGCAACTGCACGTACAGGGATAAGATCCGGAACGCGTTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 90 bp CCCGCGTGGGGCATGGTGATGGTCTCGTTGGTGTTGGAGCCCACGTaGAAGATGACCACGGCTGAGGCGTTCTGCAGGAACGCGTTCCGG +
Preference number: 6 (lower is better)
Translates to: PAWGMVMVSLVLEPT*KMTTAEAFCRNAFR
Trigger: CCGGAACGCGTTCCTGCAGAACGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATCACCATGCCCCACGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp ACACCCGCGTGGGGCATGGTGATGGTCTCGTTGGTGTaGGAGCCCACGTTGAAGATGACCACGGCTGAGGCG +
Preference number: 6 (lower is better)
Translates to: TPAWGMVMVSLV*EPTLKMTTAEA
Trigger: CGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATCACCATGCCCCACGCGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp TGTCCCGCGTGGGGCATGGTGATGGTCTCGTTGGTGTaGGAGCCCACGTTGAAGATGACCACGGCTGAGGCG +
Preference number: 6 (lower is better)
Translates to: CPAWGMVMVSLV*EPTLKMTTAEA
Trigger: CGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATCACCATGCCCCACGCGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506101.2
CDS CAA 90 bp GCGTTCTGCAGGAACGCGTTCCGGATCTTATCCCTGTACGTGCAGTaGCCCTTGGGGATGAGGGCTATCCAGTTCTTGCCGCGGGTCGGG +
Preference number: 6 (lower is better)
Translates to: AFCRNAFRILSLYVQ*PLGMRAIQFLPRVG
Trigger: CCCGACCCGCGGCAAGAACTGGATAGCCCTCATCCCCAAGGGCAACTGCACGTACAGGGATAAGATCCGGAACGCGTTCCTGCAGAACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 90 bp GCCACGATGTCTTCTACACCCGCGTGGGGCATGGTGATGGTCTCGTaGGTGTTGGAGCCCACGTTGAAGATGACCACGGCTGAGGCGTTC +
Preference number: 6 (lower is better)
Translates to: ATMSSTPAWGMVMVS*VLEPTLKMTTAEAF
Trigger: GAACGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATCACCATGCCCCACGCGGGTGTAGAAGACATCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000507500.5
ENST00000515673.7
CDS TCA 72 bp GCCATGTTGAGAGAGCCAGACTGCAGCACGCTTGGATaGGAGACATTGCCATCTTTATCCGCCGGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: AMLREPDCSTLG*ETLPSLSAGAP
Trigger: GGGGGCCCCGGCGGATAAAGATGGCAATGTCTCTCATCCAAGCGTGCTGCAGTCTGGCTCTCTCAACATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000507500.5
ENST00000515673.7
CDS CCA 72 bp TGTTGTGTCGCTGGCACCTGTGATCTGGTTGGTGGGTaGACCTCCCAGAGAGCCCTCGAAGTCAGTGGGCAA +
Preference number: 6 (lower is better)
Translates to: CCVAGTCDLVGG*TSQRALEVSGQ
Trigger: TTGCCCACTGACTTCGAGGGCTCTCTGGGAGGTCCACCCACCAACCAGATCACAGGTGCCAGCGACACAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp GCGTTCCGGATCTTATCCCTGTACGTGCAGTTGCCCTaGGGGATGAGGGCTATCCAGTTCTTGCCGCGGGTC +
Preference number: 6 (lower is better)
Translates to: AFRILSLYVQLP*GMRAIQFLPRV
Trigger: GACCCGCGGCAAGAACTGGATAGCCCTCATCCCCAAGGGCAACTGCACGTACAGGGATAAGATCCGGAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 90 bp ATGTCTTCTACACCCGCGTGGGGCATGGTGATGGTCTCGTTGGTGTaGGAGCCCACGTTGAAGATGACCACGGCTGAGGCGTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: MSSTPAWGMVMVSLV*EPTLKMTTAEAFCR
Trigger: CCTGCAGAACGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATCACCATGCCCCACGCGGGTGTAGAAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000507500.5
ENST00000515673.7
CDS CAA 90 bp GAAGAATTCTGTCCCGCGTGGGGCATGGTGATGGTCTCGTTGGTGTaGGAGCCCACGTTGAAGATGACCACGGCTGAGGCGTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: EEFCPAWGMVMVSLV*EPTLKMTTAEAFCR
Trigger: CCTGCAGAACGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATCACCATGCCCCACGCGGGACAGAATTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506101.2
CDS CAA 90 bp CCCATTGAAGAATTCTGTCCCGCGTGGGGCATGGTGATGGTCTCGTaGGTGTTGGAGCCCACGTTGAAGATGACCACGGCTGAGGCGTTC +
Preference number: 6 (lower is better)
Translates to: PIEEFCPAWGMVMVS*VLEPTLKMTTAEAF
Trigger: GAACGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATCACCATGCCCCACGCGGGACAGAATTCTTCAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506101.2
CDS GCA 72 bp GAGCCCACGTTGAAGATGACCACGGCTGAGGCGTTCTaGAGGAACGCGTTCCGGATCTTATCCCTGTACGTG +
Preference number: 6 (lower is better)
Translates to: EPTLKMTTAEAF*RNAFRILSLYV
Trigger: CACGTACAGGGATAAGATCCGGAACGCGTTCCTGCAGAACGCCTCAGCCGTGGTCATCTTCAACGTGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp GGCATGGTGATGGTCTCGTTGGTGTTGGAGCCCACGTaGAAGATGACCACGGCTGAGGCGTTCTGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: GMVMVSLVLEPT*KMTTAEAFCRN
Trigger: GTTCCTGCAGAACGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATCACCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp TCTTCTACACCCGCGTGGGGCATGGTGATGGTCTCGTaGGTGTTGGAGCCCACGTTGAAGATGACCACGGCT +
Preference number: 6 (lower is better)
Translates to: SSTPAWGMVMVS*VLEPTLKMTTA
Trigger: AGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATCACCATGCCCCACGCGGGTGTAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp GAATTCTGTCCCGCGTGGGGCATGGTGATGGTCTCGTaGGTGTTGGAGCCCACGTTGAAGATGACCACGGCT +
Preference number: 6 (lower is better)
Translates to: EFCPAWGMVMVS*VLEPTLKMTTA
Trigger: AGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAACGAGACCATCACCATGCCCCACGCGGGACAGAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506101.2
CDS TCA 72 bp GTTGGTGTTGGAGCCCACGTTGAAGATGACCACGGCTaGGGCGTTCTGCAGGAACGCGTTCCGGATCTTATC +
Preference number: 6 (lower is better)
Translates to: VGVGAHVEDDHG*GVLQERVPDLI
Trigger: GATAAGATCCGGAACGCGTTCCTGCAGAACGCCTCAGCCGTGGTCATCTTCAACGTGGGCTCCAACACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CCA 72 bp AGCAGCCATGTTGAGAGAGCCAGACTGCAGCACGCTTaGATGAGAGACATTGCCATCTTTATCCGCCGGGGC +
Preference number: 6 (lower is better)
Translates to: SSHVERARLQHA*MRDIAIFIRRG
Trigger: GCCCCGGCGGATAAAGATGGCAATGTCTCTCATCCAAGCGTGCTGCAGTCTGGCTCTCTCAACATGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000507500.5
ENST00000515673.7
CDS CCA 72 bp CTTTCATTCACTGTTGTGTCGCTGGCACCTGTGATCTaGTTGGTGGGTGGACCTCCCAGAGAGCCCTCGAAG +
Preference number: 6 (lower is better)
Translates to: LSFTVVSLAPVI*LVGGPPREPSK
Trigger: CTTCGAGGGCTCTCTGGGAGGTCCACCCACCAACCAGATCACAGGTGCCAGCGACACAACAGTGAATGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp AGGAACGCGTTCCGGATCTTATCCCTGTACGTGCAGTaGCCCTTGGGGATGAGGGCTATCCAGTTCTTGCCG +
Preference number: 6 (lower is better)
Translates to: RNAFRILSLYVQ*PLGMRAIQFLP
Trigger: CGGCAAGAACTGGATAGCCCTCATCCCCAAGGGCAACTGCACGTACAGGGATAAGATCCGGAACGCGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp TCATTCACTGTTGTGTCGCTGGCACCTGTGATCTGGTaGGTGGGTGGACCTCCCAGAGAGCCCTCGAAGTCA +
Preference number: 6 (lower is better)
Translates to: SFTVVSLAPVIW*VGGPPREPSKS
Trigger: TGACTTCGAGGGCTCTCTGGGAGGTCCACCCACCAACCAGATCACAGGTGCCAGCGACACAACAGTGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 90 bp ACTGAACTTTCATTCACTGTTGTGTCGCTGGCACCTGTGATCTGGTaGGTGGGTGGACCTCCCAGAGAGCCCTCGAAGTCAGTGGGCAAG +
Preference number: 6 (lower is better)
Translates to: TELSFTVVSLAPVIW*VGGPPREPSKSVGK
Trigger: CTTGCCCACTGACTTCGAGGGCTCTCTGGGAGGTCCACCCACCAACCAGATCACAGGTGCCAGCGACACAACAGTGAATGAAAGTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS TCA 72 bp GGCTCCCACAGTCCGGACAGCAGGGTCCAAAGTGACTaGACTTTCATTCACTGTTGTGTCGCTGGCACCTGT +
Preference number: 6 (lower is better)
Translates to: GSHSPDSRVQSD*TFIHCCVAGTC
Trigger: ACAGGTGCCAGCGACACAACAGTGAATGAAAGTTCAGTCACTTTGGACCCTGCTGTCCGGACTGTGGGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS TCA 72 bp GCAAGGCTCCCACAGTCCGGACAGCAGGGTCCAAAGTaGCTGAACTTTCATTCACTGTTGTGTCGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: ARLPQSGQQGPK*LNFHSLLCRWH
Trigger: GTGCCAGCGACACAACAGTGAATGAAAGTTCAGTCACTTTGGACCCTGCTGTCCGGACTGTGGGAGCCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CCA 72 bp TGCTCACTGTTAGTAGTAAAGATGACGTCTCCCTCCTaGGGGATGGGGTCTGTATCCTGGACCACCTGCAAG +
Preference number: 6 (lower is better)
Translates to: CSLLVVKMTSPS*GMGSVSWTTCK
Trigger: CTTGCAGGTGGTCCAGGATACAGACCCCATCCCCCAGGAGGGAGACGTCATCTTTACTACTAACAGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS CCA 72 bp GAGTCAGCCGGCAGGGCAGGATCCGGACAACGTCATTaGGCTTGTACCCTTCAATACAAACTGCACAGTTGT +
Preference number: 6 (lower is better)
Translates to: ESAGRAGSGQRH*ACTLQYKLHSC
Trigger: ACAACTGTGCAGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGATCCTGCCCTGCCGGCTGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515057.1
CDS CCA 72 bp AACTCACTGTTAGTAGTAAAGATGACGTCTCCCTCCTaGGGGATGGGGTCTGTATCCTGGACCACCTGCAAG +
Preference number: 6 (lower is better)
Translates to: NSLLVVKMTSPS*GMGSVSWTTCK
Trigger: CTTGCAGGTGGTCCAGGATACAGACCCCATCCCCCAGGAGGGAGACGTCATCTTTACTACTAACAGTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507500.5
CDS GCA 72 bp TCCTTCTCGGCCACGGTAAAGTCCAGGCAGAGCAGATaGACGAAACAAAAGGAAAGCAGCCATGTTGAGAGA +
Preference number: 6 (lower is better)
Translates to: SFSATVKSRQSR*TKQKESSHVER
Trigger: TCTCTCAACATGGCTGCTTTCCTTTTGTTTCGTGCATCTGCTCTGCCTGGACTTTACCGTGGCCGAGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000507500.5
ENST00000515673.7
CDS CCA 72 bp TTACTATCTCCTTCCCTTTTGGCTCAGGAATCATTATaGCCACGATGTCTTCTACACCCGCGTGGGGCATGG +
Preference number: 6 (lower is better)
Translates to: LLSPSLLAQESL*PRCLLHPRGAW
Trigger: CCATGCCCCACGCGGGTGTAGAAGACATCGTGGCCATAATGATTCCTGAGCCAAAAGGGAAGGAGATAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306799.7
ENST00000507500.5
ENST00000515673.7
CDS CCA 72 bp AAAGATGCCGGCAGGGCAGGATCCGGACAACGTCATTaGGCTTGTACCCTTCAATACAAACTGCACAGTTGT +
Preference number: 6 (lower is better)
Translates to: KDAGRAGSGQRH*ACTLQYKLHSC
Trigger: ACAACTGTGCAGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGATCCTGCCCTGCCGGCATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp TGCCGGCAGGGCAGGATCCGGACAACGTCATTGGGCTaGTACCCTTCAATACAAACTGCACAGTTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: CRQGRIRTTSLG*YPSIQTAQLSK
Trigger: TTTTGACAACTGTGCAGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGATCCTGCCCTGCCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp AAAAGATGCCGGCAGGGCAGGATCCGGACAACGTCATaGGGCTTGTACCCTTCAATACAAACTGCACAGTTG +
Preference number: 6 (lower is better)
Translates to: KRCRQGRIRTTS*GLYPSIQTAQL
Trigger: CAACTGTGCAGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGATCCTGCCCTGCCGGCATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS CAA 72 bp AGCCGGCAGGGCAGGATCCGGACAACGTCATTGGGCTaGTACCCTTCAATACAAACTGCACAGTTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: SRQGRIRTTSLG*YPSIQTAQLSK
Trigger: TTTTGACAACTGTGCAGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGATCCTGCCCTGCCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515057.1
CDS TCA 72 bp CTGCTTCCAGGAAACTCTCTCATATTTCAGACCCATTaGAGAATTCTGTCCCGCGTGGGGCATGGTGATGGT +
Preference number: 6 (lower is better)
Translates to: LLPGNSLIFQTH*RILSRVGHGDG
Trigger: ACCATCACCATGCCCCACGCGGGACAGAATTCTTCAATGGGTCTGAAATATGAGAGAGTTTCCTGGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506101.2
CDS GCA 72 bp ATCCCCCAGTCGGCGCTGGTTCCTATCCCTGGCATTTaGATATCGAAACCTCTGGATGTAATAAAAGACGAG +
Preference number: 6 (lower is better)
Translates to: IPQSALVPIPGI*ISKPLDVIKDE
Trigger: CTCGTCTTTTATTACATCCAGAGGTTTCGATATGCAAATGCCAGGGATAGGAACCAGCGCCGACTGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515057.1
ENST00000515673.7
CDS CAA 72 bp CATCCCCCAGTCGGCGCTGGTTCCTATCCCTGGCATTaGCATATCGAAACCTCTGGATGTAATAAAAGACGA +
Preference number: 6 (lower is better)
Translates to: HPPVGAGSYPWH*HIETSGCNKRR
Trigger: TCGTCTTTTATTACATCCAGAGGTTTCGATATGCAAATGCCAGGGATAGGAACCAGCGCCGACTGGGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515057.1
ENST00000515673.7
CDS CAA 90 bp TGGAAAAGATGCCGGCAGGGCAGGATCCGGACAACGTCATTGGGCTaGTACCCTTCAATACAAACTGCACAGTTGTCAAAATCAGACTCT +
Preference number: 6 (lower is better)
Translates to: WKRCRQGRIRTTSLG*YPSIQTAQLSKSDS
Trigger: AGAGTCTGATTTTGACAACTGTGCAGTTTGTATTGAAGGGTACAAGCCCAATGACGTTGTCCGGATCCTGCCCTGCCGGCATCTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515673.7
CDS GCA 72 bp GAGACAAACACAACCGAAGTGCGGCTCACATATTTCTaGAAGTTCCGGGTTCCGATGGTGATGTACATTGTC +
Preference number: 6 (lower is better)
Translates to: ETNTTEVRLTYF*KFRVPMVMYIV
Trigger: GACAATGTACATCACCATCGGAACCCGGAACTTGCAGAAATATGTGAGCCGCACTTCGGTTGTGTTTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515057.1
ENST00000515673.7
CDS CAA 90 bp TTCCCTTCCTTTCCCTTGGGTCCTACTATCTCTTTGCTTCTGGATTaGTCGTTTCAAGATTTCACTTCTTCACAGTCCTGGTCAGTGGAA +
Preference number: 6 (lower is better)
Translates to: FPSFPLGPTISLLLD*SFQDFTSSQSWSVE
Trigger: TTCCACTGACCAGGACTGTGAAGAAGTGAAATCTTGAAACGACAAATCCAGAAGCAAAGAGATAGTAGGACCCAAGGGAAAGGAAGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS CCA 72 bp CGTTTCAAGATTTCACTTCTTCACAGTCCTGGTCAGTaGAAAGTTCTACATCAGACAGTCCAACCTCCATTG +
Preference number: 6 (lower is better)
Translates to: RFKISLLHSPGQ*KVLHQTVQPPL
Trigger: CAATGGAGGTTGGACTGTCTGATGTAGAACTTTCCACTGACCAGGACTGTGAAGAAGTGAAATCTTGAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS CCA 72 bp TTACTATCTCCTTCCCTTTTGGCTCAGGAATCATTATaGCCACGATGTCTTCTACACCTGAGGAAAGGGAAT +
Preference number: 6 (lower is better)
Translates to: LLSPSLLAQESL*PRCLLHLRKGN
Trigger: ATTCCCTTTCCTCAGGTGTAGAAGACATCGTGGCCATAATGATTCCTGAGCCAAAAGGGAAGGAGATAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420921.6
CDS CCA 72 bp GATTTGTCGTTTCAAGATTTCACTTCTTCACAGTCCTaGTCAGTGGAAAGTTCTACATCAGACAGTCCAACC +
Preference number: 6 (lower is better)
Translates to: DLSFQDFTSSQS*SVESSTSDSPT
Trigger: GGTTGGACTGTCTGATGTAGAACTTTCCACTGACCAGGACTGTGAAGAAGTGAAATCTTGAAACGACAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS CAA 72 bp TTTCCCTTGGGTCCTACTATCTCTTTGCTTCTGGATTaGTCGTTTCAAGATTTCACTTCTTCACAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: FPLGPTISLLLD*SFQDFTSSQSW
Trigger: CCAGGACTGTGAAGAAGTGAAATCTTGAAACGACAAATCCAGAAGCAAAGAGATAGTAGGACCCAAGGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7
CDS GCA 72 bp ATATCGAAACCTCTGGATGTAATAAAAGACGAGCCATaGGAGGGAAATGATCATCAGGACAATGAAGGAGAT +
Preference number: 6 (lower is better)
Translates to: ISKPLDVIKDEP*EGNDHQDNEGD
Trigger: ATCTCCTTCATTGTCCTGATGATCATTTCCCTCGCATGGCTCGTCTTTTATTACATCCAGAGGTTTCGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000420921.6
ENST00000506101.2
ENST00000507500.5
ENST00000515057.1
ENST00000515673.7
CDS CCA 72 bp CTTCCTTTCCCTTGGGTCCTACTATCTCTTTGCTTCTaGATTTGTCGTTTCAAGATTTCACTTCTTCACAGT +
Preference number: 6 (lower is better)
Translates to: LPFPWVLLSLCF*ICRFKISLLHS
Trigger: ACTGTGAAGAAGTGAAATCTTGAAACGACAAATCCAGAAGCAAAGAGATAGTAGGACCCAAGGGAAAGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306799.7
ENST00000420921.6
ENST00000506101.2
ENST00000515673.7