Pregenerated sensors for RNF139 (Homo sapiens)
Ensembl gene IDs: ENSG00000170881Ensembl transcript IDs: ENST00000303545.4, ENST00000517684.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTCCCTCAGTCTCTCTCTaGATCAGGACTTTCAAACTC | + |
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Preference number: 2 (lower is better) Translates to: SKEILYIGTHHSPPFPFFPSVSL*IRTFKL Trigger: GAGTTTGAAAGTCCTGATTCAGAGAGAGACTGAGGG...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| 3UTR-3UTR GCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTTGTGGTTTCCTGATTTaGATTTTCATTCTCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: SKEILYIGTHHSPPFPFFCGFLI*IFILPP Trigger: GGGTGGGAGAATGAAAATGCAAATCAGGAAACCACA...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| 3UTR-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTGAAAGGACAATTTTATaGCAATACTGCAGACACAGA | + |
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Preference number: 2 (lower is better) Translates to: SKEILYIGTHHSPPFPFFERTIL*QYCRHR Trigger: TCTGTGTCTGCAGTATTGTCATAAAATTGTCCTTTC...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| 3UTR-3UTR CAA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTTTCATTGAAGAATATTaGGCACAGGTGACGCACCAT | + |
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Preference number: 3 (lower is better) Translates to: SKEILYIGTHHSPPFPFFFIEEY*AQVTHH Trigger: ATGGTGCGTCACCTGTGCCAAATATTCTTCAATGAA...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| 3UTR-3UTR CAA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTGTTGATACAGTTTATTaGTCAACCCTCAGTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SKEILYIGTHHSPPFPFFVDTVY*STLSLS Trigger: AGAGAGACTGAGGGTTGACAAATAAACTGTATCAAC...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| 3UTR TCA 72 bp | TTGATACAGTTTATTTGTCAACCCTCAGTCTCTCTCTaGATCAGGACTTTCAAACTCAGCTCAATTACACTG | + |
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Preference number: 3 (lower is better) Translates to: LIQFICQPSVSL*IRTFKLSSITL Trigger: CAGTGTAATTGAGCTGAGTTTGAAAGTCCTGATTCAGAGAGAGACTGAGGGTTGACAAATAAACTGTATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTGCCCCACGGCCGCCATaGGCCGCTGCCACACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFAPRPP*AAATPG Trigger: CCCTGGTGTGGCAGCGGCTCATGGCGGCCGTGGGGC...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR GCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTTGGGCCATCCGCACCTaGTGCTGCGGGGGCCCCACG | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFWAIRT*CCGGPT Trigger: CGTGGGGCCCCCGCAGCAGCAGGTGCGGATGGCCCA...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTGCCGCCCAGACCTGCTaGTGGGCCATCCGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFAAQTC*WAIRTC Trigger: GCAGGTGCGGATGGCCCATCAGCAGGTCTGGGCGGC...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR CCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTTCGCGTCCCTCGAGGTaGAGCAGGCGGCGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFSRPSR*SRRRRQ Trigger: CTGCCTCCGCCGCCTGCTCCACCTCGAGGGACGCGA...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR GCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTGGGCAACTCCGCCCCTaGCCTCCTTCCTCTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFGQLRP*PPSSPV Trigger: GACAGGAGAGGAAGGAGGGCAGGGGCGGAGTTGCCC...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR CCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTAGCCGGAGGAAGATCTaGAGCACGATGCAGAACCGG | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFSRRKI*STMQNR Trigger: CCGGTTCTGCATCGTGCTCCAGATCTTCCTCCGGCT...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR GCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTAGATCTGGAGCACGATaGAGAACCGGCTTTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFRSGAR*RTGFGW Trigger: CCAGCCAAAGCCGGTTCTGCATCGTGCTCCAGATCT...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTGCTGCGCCTGTGTGCTaGATCACTCCATTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFAAPVC*ITPFLS Trigger: AGAAAGAAATGGAGTGATTCAGCACACAGGCGCAGC...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR GCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTAAATTCTTCAGCTGCTaGGCCTGTGTGCTGAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFKFFSC*ACVLNH Trigger: GTGATTCAGCACACAGGCGCAGCAGCTGAAGAATTT...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTCTCAATTCCAAAAGCTaGCGTGTTGTAGGCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFLNSKS*RVVGTI Trigger: TATGGTGCCTACAACACGTCAGCTTTTGGAATTGAG...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTACACATGAGAGGCACTaGGAGACATTAATACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFTHERH*ETLIQG Trigger: ACCCTGTATTAATGTCTCTCAGTGCCTCTCATGTGT...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTCGAAAAGATGACACATaGGAGGCACTGAGAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFRKDDT*EALRDI Trigger: AATGTCTCTCAGTGCCTCTCATGTGTCATCTTTTCG...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTATGTCTACGAAAAGATaGCACATGAGAGGCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFMSTKR*HMRGTE Trigger: CTCAGTGCCTCTCATGTGTCATCTTTTCGTAGACAT...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR CCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTGGGTCTGTCATTCCATaGATAAAATGCAGGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFGSVIP*IKCRTA Trigger: TGCAGTCCTGCATTTTATCCATGGAATGACAGACCC...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTACAGTAAAGTCTCTCTaGTGTGTAATGGTAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFTVKSL*CVMVAL Trigger: CAGAGCTACCATTACACATCAGAGAGACTTTACTGT...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR GCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTCCACTTCAGTTTCACTaGCAGGACAAACACTGTATT | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFPLQFH*QDKHCI Trigger: AATACAGTGTTTGTCCTGGCAGTGAAACTGAAGTGG...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR GCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTATTAAATTCTTCAGCTaGTGCGCCTGTGTGCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFIKFFS*CACVLN Trigger: ATTCAGCACACAGGCGCAGCAGCTGAAGAATTTAAT...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTCAAATAATGGGCTACTaGGGAAATTACAGCACTCAT | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFQIMGY*GNYSTH Trigger: ATGAGTGCTGTAATTTCCTCAGTAGCCCATTATTTG...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTGTCATCTTCCTCAGTTaGTCCAATAAAGGCCAATAT | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFVIFLS*SNKGQY Trigger: ATATTGGCCTTTATTGGATCAACTGAGGAAGATGAC...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTATTGGACAAGTATCTTaGATGTACAGCCATTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFIGQVS*MYSHFR Trigger: TCGGAAATGGCTGTACATTCAAGATACTTGTCCAAT...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTTCGATGTATACTTTCTaGTGGCACATTGGACAAGTA | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFSMYTF*WHIGQV Trigger: TACTTGTCCAATGTGCCATCAGAAAGTATACATCGA...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR GCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTCAGTTCCACACAAAATaGTGTAACTGCAAACAACCA | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFQFHTK*CNCKQP Trigger: TGGTTGTTTGCAGTTACAGCATTTTGTGTGGAACTG...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTTGTACGTGTAAAACTTaGAAAGTGATCGTTGTGACA | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFCTCKT*KVIVVT Trigger: TGTCACAACGATCACTTTTCAAGTTTTACACGTACA...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR TCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTAATAATACTGCCTGTTaGACGAACGTAGTAGACATA | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFNNTAC*TNVVDI Trigger: TATGTCTACTACGTTCGTTCAACAGGCAGTATTATT...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR GCA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTTTTCCGAAGGCAAAGTaGATGGAAATAATGATTACA | + |
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Preference number: 4 (lower is better) Translates to: SKEILYIGTHHSPPFPFFFPKAK*MEIMIT Trigger: TGTAATCATTATTTCCATGCACTTTGCCTTCGGAAA...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS TCA 90 bp | GATGGGCCATCCGCACCTGCTGCTGCGGGGGCCCCACGGCCGCCATaGGCCGCTGCCACACCAGGGCTCGGTGGGCCGGGCAGGGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: DGPSAPAAAGAPRPP*AAATPGLGGPGRAA Trigger: CGCGGCCCTGCCCGGCCCACCGAGCCCTGGTGTGGCAGCGGCTCATGGCGGCCGTGGGGCCCCCGCAGCAGCAGGTGCGGATGGCCCATC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS TCA 90 bp | AGGCAGGGCACCCGGAGCGCCACTTCGAGCGCCGCCCAGACCTGCTaGTGGGCCATCCGCACCTGCTGCTGCGGGGGCCCCACGGCCGCC | + |
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Preference number: 5 (lower is better) Translates to: RQGTRSATSSAAQTC*WAIRTCCCGGPTAA Trigger: GGCGGCCGTGGGGCCCCCGCAGCAGCAGGTGCGGATGGCCCATCAGCAGGTCTGGGCGGCGCTCGAAGTGGCGCTCCGGGTGCCCTGCCT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS TCA 90 bp | CCACAGCGAGGGACCTTTTCGAGGAAGCAGCTCAATTCCAAAAGCTaGCGTGTTGTAGGCACCATAGAAGTCAATGTGCAAAGAAGCATA | + |
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Preference number: 5 (lower is better) Translates to: PQRGTFSRKQLNSKS*RVVGTIEVNVQRSI Trigger: TATGCTTCTTTGCACATTGACTTCTATGGTGCCTACAACACGTCAGCTTTTGGAATTGAGCTGCTTCCTCGAAAAGGTCCCTCGCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303545.4 ENST00000517684.2 |
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| CDS-3UTR CAA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTGATGCAGAACCGGCTTaGGCTGGAATCCGGGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: SKEILYIGTHHSPPFPFFDAEPA*AGIRVG Trigger: TCCTACCCGGATTCCAGCCAAAGCCGGTTCTGCATC...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS TCA 90 bp | GCAGAGACAAACAGCACAGGAAAATGTCTACGAAAAGATGACACATaGGAGGCACTGAGAGACATTAATACAGGGTCTGTCATTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: AETNSTGKCLRKDDT*EALRDINTGSVIPW Trigger: CCATGGAATGACAGACCCTGTATTAATGTCTCTCAGTGCCTCTCATGTGTCATCTTTTCGTAGACATTTTCCTGTGCTGTTTGTCTCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS TCA 90 bp | TCAGTTTCATTTGCCATCCTTAAGATGTACATTAACACTGTAGCCTaGGCTGTAACTCTTGTTAGCCAAAAGACTCGTAGTATGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SVSFAILKMYINTVA*AVTLVSQKTRSMSG Trigger: CCCAGACATACTACGAGTCTTTTGGCTAACAAGAGTTACAGCTCAGGCTACAGTGTTAATGTACATCTTAAGGATGGCAAATGAAACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS CCA 90 bp | CAATTCCCTGTCAGATTCAGCAGCAGCTTCTCTTACAGCTTCCTCTaGAGTTTCATTGGGTGGAATAAATCCATTGTTGTTAGATACATT | + |
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Preference number: 5 (lower is better) Translates to: QFPVRFSSSFSYSFL*SFIGWNKSIVVRYI Trigger: AATGTATCTAACAACAATGGATTTATTCCACCCAATGAAACTCCAGAGGAAGCTGTAAGAGAAGCTGCTGCTGAATCTGACAGGGAATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS GCA 90 bp | GCACTGAGAGACATTAATACAGGGTCTGTCATTCCATGGATAAAATaGAGGACTGCAGTTAATAAAAGGCACATGTTTCTACTTAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: ALRDINTGSVIPWIK*RTAVNKRHMFLLKR Trigger: TCGCTTAAGTAGAAACATGTGCCTTTTATTAACTGCAGTCCTGCATTTTATCCATGGAATGACAGACCCTGTATTAATGTCTCTCAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR CAA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTCATTGGACAAGTATCTaGAATGTACAGCCATTTCCG | + |
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Preference number: 5 (lower is better) Translates to: SKEILYIGTHHSPPFPFFHWTSI*NVQPFP Trigger: CGGAAATGGCTGTACATTCAAGATACTTGTCCAATG...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS-3UTR CAA 90 bp | TCTAAAGAAATACTATATATCGGTACACACCATTCCCCACCATTCCCCTTCTTTTCCTCTGGAGTTTCATaGGGTGGAATAAATCCATTG | + |
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Preference number: 5 (lower is better) Translates to: SKEILYIGTHHSPPFPFFSSGVS*GGINPL Trigger: CAATGGATTTATTCCACCCAATGAAACTCCAGAGGA...AAAGAAGGGGAATGGTGGGGAATGGTGTGTACCGATATATAGTATTTCTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS GCA 90 bp | ATGCTATTTTCATCAGTCAGTATCATCATTAAATTCTTCAGCTGCTaGGCCTGTGTGCTGAATCACTCCATTTCTTTCTCTTTGAACATC | + |
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Preference number: 5 (lower is better) Translates to: MLFSSVSIIIKFFSC*ACVLNHSISFSLNI Trigger: GATGTTCAAAGAGAAAGAAATGGAGTGATTCAGCACACAGGCGCAGCAGCTGAAGAATTTAATGATGATACTGACTGATGAAAATAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS TCA 72 bp | TCCGCACCTGCTGCTGCGGGGGCCCCACGGCCGCCATaGGCCGCTGCCACACCAGGGCTCGGTGGGCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: SAPAAAGAPRPP*AAATPGLGGPG Trigger: GCCCGGCCCACCGAGCCCTGGTGTGGCAGCGGCTCATGGCGGCCGTGGGGCCCCCGCAGCAGCAGGTGCGGA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS TCA 72 bp | ACCCGGAGCGCCACTTCGAGCGCCGCCCAGACCTGCTaGTGGGCCATCCGCACCTGCTGCTGCGGGGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TRSATSSAAQTC*WAIRTCCCGGP Trigger: GGGGCCCCCGCAGCAGCAGGTGCGGATGGCCCATCAGCAGGTCTGGGCGGCGCTCGAAGTGGCGCTCCGGGT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS CAA 72 bp | CCGGAGGAAGATCTGGAGCACGATGCAGAACCGGCTTaGGCTGGAATCCGGGTAGGAGTTGAAGATGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: PEEDLEHDAEPA*AGIRVGVEDGV Trigger: GACGCCATCTTCAACTCCTACCCGGATTCCAGCCAAAGCCGGTTCTGCATCGTGCTCCAGATCTTCCTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS GCA 72 bp | ATACACCAAAGAGCCGGAGGAAGATCTGGAGCACGATaGAGAACCGGCTTTGGCTGGAATCCGGGTAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: IHQRAGGRSGAR*RTGFGWNPGRS Trigger: ACTCCTACCCGGATTCCAGCCAAAGCCGGTTCTGCATCGTGCTCCAGATCTTCCTCCGGCTCTTTGGTGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS CAA 90 bp | ACCAAAGAGCCGGAGGAAGATCTGGAGCACGATGCAGAACCGGCTTaGGCTGGAATCCGGGTAGGAGTTGAAGATGGCGTCGATGATGTA | + |
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Preference number: 6 (lower is better) Translates to: TKEPEEDLEHDAEPA*AGIRVGVEDGVDDV Trigger: TACATCATCGACGCCATCTTCAACTCCTACCCGGATTCCAGCCAAAGCCGGTTCTGCATCGTGCTCCAGATCTTCCTCCGGCTCTTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS CCA 72 bp | CTGGATGCAAATACACCAAAGAGCCGGAGGAAGATCTaGAGCACGATGCAGAACCGGCTTTGGCTGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: LDANTPKSRRKI*STMQNRLWLES Trigger: GGATTCCAGCCAAAGCCGGTTCTGCATCGTGCTCCAGATCTTCCTCCGGCTCTTTGGTGTATTTGCATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS TCA 72 bp | GGGACCTTTTCGAGGAAGCAGCTCAATTCCAAAAGCTaGCGTGTTGTAGGCACCATAGAAGTCAATGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GTFSRKQLNSKS*RVVGTIEVNVQ Trigger: TTGCACATTGACTTCTATGGTGCCTACAACACGTCAGCTTTTGGAATTGAGCTGCTTCCTCGAAAAGGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000303545.4 ENST00000517684.2 |
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| CDS TCA 72 bp | TGCAACAAAGCCAAGACGCCTGTCATCTTCCTCAGTTaGTCCAATAAAGGCCAATATTCCAAGCCCCAAATA | + |
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Preference number: 6 (lower is better) Translates to: CNKAKTPVIFLS*SNKGQYSKPQI Trigger: TATTTGGGGCTTGGAATATTGGCCTTTATTGGATCAACTGAGGAAGATGACAGGCGTCTTGGCTTTGTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS CAA 90 bp | TTCAGCTGCTGCGCCTGTGTGCTGAATCACTCCATTTCTTTCTCTTaGAACATCATCATCACAATCTGTACTGTCATCTTCGTTCAATTC | + |
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Preference number: 6 (lower is better) Translates to: FSCCACVLNHSISFS*NIIITICTVIFVQF Trigger: GAATTGAACGAAGATGACAGTACAGATTGTGATGATGATGTTCAAAGAGAAAGAAATGGAGTGATTCAGCACACAGGCGCAGCAGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS TCA 72 bp | GAAAATGTCTACGAAAAGATGACACATGAGAGGCACTaGGAGACATTAATACAGGGTCTGTCATTCCATGGA | + |
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Preference number: 6 (lower is better) Translates to: ENVYEKMTHERH*ETLIQGLSFHG Trigger: TCCATGGAATGACAGACCCTGTATTAATGTCTCTCAGTGCCTCTCATGTGTCATCTTTTCGTAGACATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS GCA 72 bp | TCATCAGTCAGTATCATCATTAAATTCTTCAGCTGCTaGGCCTGTGTGCTGAATCACTCCATTTCTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSVSIIIKFFSC*ACVLNHSISFS Trigger: AGAGAAAGAAATGGAGTGATTCAGCACACAGGCGCAGCAGCTGAAGAATTTAATGATGATACTGACTGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS CCA 72 bp | GCACTGAGAGACATTAATACAGGGTCTGTCATTCCATaGATAAAATGCAGGACTGCAGTTAATAAAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ALRDINTGSVIP*IKCRTAVNKRH Trigger: GTGCCTTTTATTAACTGCAGTCCTGCATTTTATCCATGGAATGACAGACCCTGTATTAATGTCTCTCAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS GCA 72 bp | AGTATCTTGAATGTACAGCCATTTCCGAAGGCAAAGTaGATGGAAATAATGATTACACGGTGTAATACGAGC | + |
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Preference number: 6 (lower is better) Translates to: SILNVQPFPKAK*MEIMITRCNTS Trigger: GCTCGTATTACACCGTGTAATCATTATTTCCATGCACTTTGCCTTCGGAAATGGCTGTACATTCAAGATACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS CAA 72 bp | TGTGCAAAGAAGCATAATAATTCACCAACACTGAAGTaGCAGCTAACAGAAAGGCTGAGCTGTACGTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: CAKKHNNSPTLK*QLTERLSCTCK Trigger: TTTACACGTACAGCTCAGCCTTTCTGTTAGCTGCAACTTCAGTGTTGGTGAATTATTATGCTTCTTTGCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000303545.4 ENST00000517684.2 |
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| CDS GCA 72 bp | GACATTAATACAGGGTCTGTCATTCCATGGATAAAATaGAGGACTGCAGTTAATAAAAGGCACATGTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: DINTGSVIPWIK*RTAVNKRHMFL Trigger: TAGAAACATGTGCCTTTTATTAACTGCAGTCCTGCATTTTATCCATGGAATGACAGACCCTGTATTAATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS CAA 90 bp | TCTCTTACAGCTTCCTCTGGAGTTTCATTGGGTGGAATAAATCCATaGTTGTTAGATACATTTGAATTATCCTTGATATCATCTTCGATG | + |
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Preference number: 6 (lower is better) Translates to: SLTASSGVSLGGINP*LLDTFELSLISSSM Trigger: CATCGAAGATGATATCAAGGATAATTCAAATGTATCTAACAACAATGGATTTATTCCACCCAATGAAACTCCAGAGGAAGCTGTAAGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS CAA 72 bp | ACAGTTAGTGTAGAATCGCACCCACTAATTATAAGATaGCAAATGAGGTCCCAAAAATCATCCCAAGAAATA | + |
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Preference number: 6 (lower is better) Translates to: TVSVESHPLIIR*QMRSQKSSQEI Trigger: TATTTCTTGGGATGATTTTTGGGACCTCATTTGCAATCTTATAATTAGTGGGTGCGATTCTACACTAACTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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| CDS CAA 72 bp | GCTTCCTCTGGAGTTTCATTGGGTGGAATAAATCCATaGTTGTTAGATACATTTGAATTATCCTTGATATCA | + |
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Preference number: 6 (lower is better) Translates to: ASSGVSLGGINP*LLDTFELSLIS Trigger: TGATATCAAGGATAATTCAAATGTATCTAACAACAATGGATTTATTCCACCCAATGAAACTCCAGAGGAAGC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303545.4 |
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