RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RNF111 (Homo sapiens)

Ensembl gene IDs: ENSG00000157450

Ensembl transcript IDs: ENST00000348370.9, ENST00000557998.5, ENST00000558977.1, ENST00000559077.1, ENST00000559160.1, ENST00000559209.5, ENST00000559592.1, ENST00000559757.1, ENST00000560080.1, ENST00000560216.5, ENST00000560952.1, ENST00000561186.5

Found 647 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACCTGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATaGCATACAGTTCTCCCCATCTTACACTTCTTCAGTCCCTTGGCA +
Preference number: 1 (lower is better)
Translates to: HLCFTCIWGNVKRTP*HTVLPILHFFSPLA
Trigger: TGCCAAGGGACTGAAGAAGTGTAAGATGGGGAGAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR CCA 90 bp CTCCATGACATACAGTTCTCCCCATCTTACACTTCTTCAGTCCCTTaGCACAGACCCGGGGTATTCCAGTGGCAAAGTAGTACATCCATT +
Preference number: 1 (lower is better)
Translates to: LHDIQFSPSYTSSVP*HRPGVFQWQSSTSI
Trigger: AATGGATGTACTACTTTGCCACTGGAATACCCCGGGTCTGTGCCAAGGGACTGAAGAAGTGTAAGATGGGGAGAACTGTATGTCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR CCA 90 bp TCTTACACTTCTTCAGTCCCTTGGCACAGACCCGGGGTATTCCAGTaGCAAAGTAGTACATCCATTACAGGCTACTTACTTAAAGGAAGA +
Preference number: 1 (lower is better)
Translates to: SYTSSVPWHRPGVFQ*QSSTSITGYLLKGR
Trigger: TCTTCCTTTAAGTAAGTAGCCTGTAATGGATGTACTACTTTGCCACTGGAATACCCCGGGTCTGTGCCAAGGGACTGAAGAAGTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR TCA 90 bp GAAAAGGATACACCAAGAAAATTTATACTGATCACTCTGGTGATGTaGCTACCACCTGCATCTGATTTATATGGGTTGTATTCTGTTCCC +
Preference number: 1 (lower is better)
Translates to: EKDTPRKFILITLVM*LPPASDLYGLYSVP
Trigger: GGGAACAGAATACAACCCATATAAATCAGATGCAGGTGGTAGTCACATCACCAGAGTGATCAGTATAAATTTTCTTGGTGTATCCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR GCA 90 bp CCTCGGTTTAATCATAAGGTATGCTCTTTAAATCCATCGTCCATCTaGACACATACTATGTTGAAGCCTGTTAACATTGACAACTACTAC +
Preference number: 1 (lower is better)
Translates to: PRFNHKVCSLNPSSI*THTMLKPVNIDNYY
Trigger: GTAGTAGTTGTCAATGTTAACAGGCTTCAACATAGTATGTGTGCAGATGGACGATGGATTTAAAGAGCATACCTTATGATTAAACCGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR CAA 90 bp GTTCAATGCTTCCAAATCTGCGCAGGTAAGTCATGCCATCTTTGGTaGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: VQCFQICAGKSCHLW*TAVPGRMGMRGRAR
Trigger: TCTTGCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCAGATTTGGAAGCATTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCATGCCATCTTTGGTTaGCTGCAGTACCAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIHAIFG*LQYQEG
Trigger: TCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCCATCTTTGGTTGACTaGAGTACCAGGAAGGATGGG +
Preference number: 2 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHPSLVD*STRKDG
Trigger: CCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGCAGCTAACCTTGCCTaGAAGTTTAGGGTCACAAGC +
Preference number: 2 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIAANLA*KFRVTS
Trigger: GCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGACATGCCATCTTTGGTTaGCTGCAGTACCAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGHAIFG*LQYQEG
Trigger: TCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATG...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTATCACTCTGGTGATGTaGCTACCACCTGCATCTGAT +
Preference number: 2 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIITLVM*LPPASD
Trigger: ATCAGATGCAGGTGGTAGTCACATCACCAGAGTGAT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGCAGCTAACCTTGCCTaGAAGTTTAGGGTCACAAGC +
Preference number: 2 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVAANLA*KFRVTS
Trigger: GCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCATGCCATCTTTGGTTaGCTGCAGTACCAGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQHAIFG*LQYQEG
Trigger: TCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATCACTCTGGTGATGTaGCTACCACCTGCATCTGAT +
Preference number: 2 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVITLVM*LPPASD
Trigger: ATCAGATGCAGGTGGTAGTCACATCACCAGAGTGAT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGCAGCTAACCTTGCCTaGAAGTTTAGGGTCACAAGC +
Preference number: 2 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQAANLA*KFRVTS
Trigger: GCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGATCACTCTGGTGATGTaGCTACCACCTGCATCTGAT +
Preference number: 2 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQITLVM*LPPASD
Trigger: ATCAGATGCAGGTGGTAGTCACATCACCAGAGTGAT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCATAGCAACAGTAGGTTaGCAGTATAATTTGTGCCTC +
Preference number: 2 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFIATVG*QYNLCL
Trigger: GAGGCACAAATTATACTGTCAACCTACTGTTGCTAT...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR-3UTR GCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGTGCCTCACAGTATCTaGAGATTTACTGTTTTCAAG +
Preference number: 2 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFVPHSI*RFTVFK
Trigger: CTTGAAAACAGTAAATCTGCAGATACTGTGAGGCAC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAAAGTCATGCCATCTTTaGTTGACTGCAGTACCAGGA +
Preference number: 2 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGKSCHL*LTAVPG
Trigger: TCCTGGTACTGCAGTCAACCAAAGATGGCATGACTT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR CCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCTTCACATATGATCCATaGGAACATGTCCTCCACATA +
Preference number: 2 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFFTYDP*EHVLHI
Trigger: TATGTGGAGGACATGTTCCCATGGATCATATGTGAA...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTATAGCAACAGTAGGTTaGCAGTATAATTTGTGCCTC +
Preference number: 2 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIIATVG*QYNLCL
Trigger: GAGGCACAAATTATACTGTCAACCTACTGTTGCTAT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACCATCTTTGGTTGACTaGAGTACCAGGAAGGATGGG +
Preference number: 2 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVPSLVD*STRKDG
Trigger: CCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCAATGCTTCCAAATCTaGGCAGGTAAGTCATGCCAT +
Preference number: 2 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQQCFQI*AGKSCH
Trigger: ATGGCATGACTTACCTGCGCAGATTTGGAAGCATTG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGACTACCACCTGCATCTaGTTTATATGGGTTGTATTC +
Preference number: 2 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVTTTCI*FIWVVF
Trigger: GAATACAACCCATATAAATCAGATGCAGGTGGTAGT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTATCACTCTGGTGATGTaGCTACCACCTGCATCTGAT +
Preference number: 2 (lower is better)
Translates to: TVILLTGCICNLGHIKHIITLVM*LPPASD
Trigger: ATCAGATGCAGGTGGTAGTCACATCACCAGAGTGAT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATTATCTGCACTGTGTTaGAAGGAAAAGGATACACCA +
Preference number: 2 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGLSALC*KEKDTP
Trigger: TGGTGTATCCTTTTCCTTTCAACACAGTGCAGATAA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTTATCTGCACTGTGTTaGAAGGAAAAGGATACACCA +
Preference number: 2 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVLSALC*KEKDTP
Trigger: TGGTGTATCCTTTTCCTTTCAACACAGTGCAGATAA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCACAGCAGCAAAAACTaGATCAGGGAAATAAAATTC +
Preference number: 2 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIHSSKN*IREIKF
Trigger: GAATTTTATTTCCCTGATTCAGTTTTTGCTGCTGTG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR GCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTTGCGCAGGTAAGTCATaGCATCTTTGGTTGACTGCA +
Preference number: 2 (lower is better)
Translates to: TVILLTGCICNLGHIKHICAGKS*HLWLTA
Trigger: TGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATGCGCAGGTAAGTCATaGCATCTTTGGTTGACTGCA +
Preference number: 2 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVCAGKS*HLWLTA
Trigger: TGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGACTACCACCTGCATCTaGTTTATATGGGTTGTATTC +
Preference number: 2 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQTTTCI*FIWVVF
Trigger: GAATACAACCCATATAAATCAGATGCAGGTGGTAGT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCACAGCAGCAAAAACTaGATCAGGGAAATAAAATTC +
Preference number: 2 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVHSSKN*IREIKF
Trigger: GAATTTTATTTCCCTGATTCAGTTTTTGCTGCTGTG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGTGCCTCACAGTATCTaGAGATTTACTGTTTTCAAG +
Preference number: 2 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQVPHSI*RFTVFK
Trigger: CTTGAAAACAGTAAATCTGCAGATACTGTGAGGCAC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTAAGTCATGCCATCTTTaGTTGACTGCAGTACCAGGA +
Preference number: 2 (lower is better)
Translates to: TVILLTGCICNLGHIKHIKSCHL*LTAVPG
Trigger: TCCTGGTACTGCAGTCAACCAAAGATGGCATGACTT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGATGCATTTGCAATCTaGGGCATATTAAGCATATTT +
Preference number: 2 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVDAFAI*GILSIF
Trigger: AAATATGCTTAATATGCCCCAGATTGCAAATGCATC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTTTATCTGCACTGTGTTaGAAGGAAAAGGATACACCA +
Preference number: 2 (lower is better)
Translates to: TVILLTGCICNLGHIKHILSALC*KEKDTP
Trigger: TGGTGTATCCTTTTCCTTTCAACACAGTGCAGATAA...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATTATCTGCACTGTGTTaGAAGGAAAAGGATACACCA +
Preference number: 2 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVLSALC*KEKDTP
Trigger: TGGTGTATCCTTTTCCTTTCAACACAGTGCAGATAA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTCACAGCAGCAAAAACTaGATCAGGGAAATAAAATTC +
Preference number: 2 (lower is better)
Translates to: TVILLTGCICNLGHIKHIHSSKN*IREIKF
Trigger: GAATTTTATTTCCCTGATTCAGTTTTTGCTGCTGTG...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR CCA 72 bp TGCTTCCAAATCTGCGCAGGTAAGTCATGCCATCTTTaGTTGACTGCAGTACCAGGAAGGATGGGAATGAGA +
Preference number: 3 (lower is better)
Translates to: CFQICAGKSCHL*LTAVPGRMGMR
Trigger: TCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCAGATTTGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCTAAAGCAGCTAACCTaGCCTGCAAGTTTAGGGTCA +
Preference number: 3 (lower is better)
Translates to: PWEHVLHIQTVILLTGCILKQLT*PASLGS
Trigger: TGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTCATGCCATCTTTGGTaGACTGCAGTACCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQSCHLW*TAVPGR
Trigger: CCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGA...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR CAA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGACTAAAGCAGCTAACCTaGCCTGCAAGTTTAGGGTCA +
Preference number: 3 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGLKQLT*PASLGS
Trigger: TGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAG...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCATCAGTGATCGACTCTaGGTAATGTATGAAGTGGGA +
Preference number: 3 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFISDRL*VMYEVG
Trigger: TCCCACTTCATACATTACCAAGAGTCGATCACTGAT...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR TCA 72 bp TTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATaGCATACAGTTCTCCCCATCTTACACTTCTTCAGT +
Preference number: 3 (lower is better)
Translates to: FTCIWGNVKRTP*HTVLPILHFFS
Trigger: ACTGAAGAAGTGTAAGATGGGGAGAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTTCATGCCATCTTTGGTaGACTGCAGTACCAGGAAGG +
Preference number: 3 (lower is better)
Translates to: TVILLTGCICNLGHIKHISCHLW*TAVPGR
Trigger: CCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGA...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR TCA 72 bp ACACCAAGAAAATTTATACTGATCACTCTGGTGATGTaGCTACCACCTGCATCTGATTTATATGGGTTGTAT +
Preference number: 3 (lower is better)
Translates to: TPRKFILITLVM*LPPASDLYGLY
Trigger: ATACAACCCATATAAATCAGATGCAGGTGGTAGTCACATCACCAGAGTGATCAGTATAAATTTTCTTGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCCGAGAGCCAGCGATCTaGGCCTCAGACGTCGGCCTA +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGREPAI*ASDVGL
Trigger: TAGGCCGACGTCTGAGGCGCAGATCGCTGGCTCTCG...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR TCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGCAGCAGCAGCGGCCTaGTGGCCAAAGATTGCAGCT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGAAAAA*WPKIAA
Trigger: AGCTGCAATCTTTGGCCATCAGGCCGCTGCTGCTGC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGCTGTACTGGCTAAGTaGGTTGGTGGTGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGAVLAK*VGGGGA
Trigger: GGCACCCCCACCACCAACTCACTTAGCCAGTACAGC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACCTACTGCGGTTCCGTaGCTCCTGTGGCCGACTTGC +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGPTAVP*LLWPTC
Trigger: GCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACCTATGTGGATGGGGTaGGGGGCGTTCATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGPMWMG*GAFMCP
Trigger: CGGGCACATGAACGCCCCCCACCCCATCCACATAGG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGACGCCGTCGCCGCCACTaGCGCTGCTCCCCTACAGCC +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGRRRRH*RCSPTA
Trigger: GGCTGTAGGGGAGCAGCGGCAGTGGCGGCGACGGCG...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACACCAAAACTGTACGTaGGGCAGCGCCTGGACTCGG +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGHQNCT*GSAWTR
Trigger: CCGAGTCCAGGCGCTGCCGCACGTACAGTTTTGGTG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCCCTCCACATGGTGAGTaGTGGGGACAGCAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGPPHGE*WGQQEG
Trigger: ACCTTCCTGCTGTCCCCAGCACTCACCATGTGGAGG...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCAGGATGCAGTCTCTGTaGTGGAGGTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGRMQSL*WRCCGW
Trigger: CCAGCCACAGCACCTCCAGCACAGAGACTGCATCCT...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGGGTCCGGGAATCACTaGCCCAGGAAGGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGGSGNH*PRKEDR
Trigger: TCTGTCTTCCTTCCTGGGTCAGTGATTCCCGGACCC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR TCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGTCCGAGGCCACTTATaGGACCGTGCACTATGGCTT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGVRGHL*DRALWL
Trigger: AAGCCATAGTGCACGGTCTCATAAGTGGCCTCGGAC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGATGTGGCCGACTTGCATaGGAACTGGAACCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGCGRLA*ELEPWL
Trigger: GAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACA...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACGGGCGTTTCTACGCTaGGCAAACCGAACACCTCCT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGRAFLR*ANRTPP
Trigger: AGGAGGTGTTCGGTTTGCGCAGCGTAGAAACGCCCG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCCTCCTGTGGCCGACTTaGATGAGAACTGGAACCCTG +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGLLWPT*MRTGTL
Trigger: CAGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAG...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGTCCGAGGCCACTTATaGGACCGTGCACTATGGCTT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGVRGHL*DRALWL
Trigger: AAGCCATAGTGCACGGTCTCATAAGTGGCCTCGGAC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGGAGTGTCCAAGGGTTaGACGAGACCGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGGVSKG*TRPIAF
Trigger: GAAAGCTATCGGTCTCGTTCAACCCTTGGACACTCC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGCTACTGGTGACAGCTaGAGCAGTATCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGATGDS*SSIRGL
Trigger: CAGGCCTCTGATACTGCTTCAGCTGTCACCAGTAGC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAAGTTGGTGGTGGGGGTaGCACAGGATGAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGSWWWG*HRMRCC
Trigger: GCAACATCTCATCCTGTGGCACCCCCACCACCAACT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGTTCCGTGGCTCCTGTaGCCGACTTGCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGVPWLL*PTCMRT
Trigger: AGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAAC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCACTTCTTCAGTCCCTTaGCACAGACCCGGGGTATTC +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGTSSVP*HRPGVF
Trigger: GAATACCCCGGGTCTGTGCCAAGGGACTGAAGAAGT...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAAGGGAGAGTCGGAAGTaGGAGAGAAATCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGRESRK*ERNPLT
Trigger: GGTGAGGGGATTTCTCTCCCACTTCCGACTCTCCCT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS-3UTR TCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGTAGGAGGAAGATGCTaGGGGATTGGTGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGVGGRC*GIGAAV
Trigger: TACAGCTGCACCAATCCCTCAGCATCTTCCTCCTAC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCCTCTGCATCACTTCATaGGGATGCAGTCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGLCITS*GCSLCA
Trigger: AGCACAGAGACTGCATCCTCATGAAGTGATGCAGAG...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCCATGCCATCTTTGGTTaGCTGCAGTACCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGHAIFG*LQYQEG
Trigger: TCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATG...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCTCCTTCACTCTCCCCTaGCCTTCTATAACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGSFTLP*PSITSV
Trigger: AACCGAGGTTATAGAAGGTCAGGGGAGAGTGAAGGA...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCCTCAGCCCCCATCCTaGGACTCTAGGGAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIPQPPS*DSRESR
Trigger: CCGACTCTCCCTAGAGTCTCAGGATGGGGGCTGAGG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGGTGTCCCTAGGTGTTaGCTCAGTCCTAATATTCCC +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGGVPRC*LSPNIP
Trigger: GGGAATATTAGGACTGAGGCAACACCTAGGGACACC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGTCCACAACTTCTGCTaGATTCTGCCTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGVHNFC*ILPQGL
Trigger: CAGCCCTTGAGGCAGAATGCAGCAGAAGTTGTGGAC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCCAGGTCCACTGGCAATaGCTGCTGTTCATGATAGCT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGQVHWQ*LLFMIA
Trigger: AGCTATCATGAACAGCAGGCATTGCCAGTGGACCTG...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGGGGCTGCGCAACCATaGTTGATCCATAGCCATCTA +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGGAAQP*LIHSHL
Trigger: TAGATGGCTATGGATCAAGCATGGTTGCGCAGCCCC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCTCATTGGCAGTAACCTaGGGAGTGGAGGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGSLAVT*GVEEAS
Trigger: AGAAGCTTCCTCCACTCCCCAGGTTACTGCCAATGA...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGGCTCCAATGAGATCTaGAGTGTCCAAGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGGSNEI*SVQGLN
Trigger: GTTCAACCCTTGGACACTCCAGATCTCATTGGAGCC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCCTACTGCGGTTCCGTaGCTCCTGTGGCCGACTTGC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHPTAVP*LLWPTC
Trigger: GCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGACACTGTGGAAGGTTaGCTACTGGTGACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGDTVEG*LLVTAE
Trigger: TTCAGCTGTCACCAGTAGCCAACCTTCCACAGTGTC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCTGGAGGTGCTGTGGCTaGAATATGGTGCGAAATTGG +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGWRCCG*NMVRNW
Trigger: CCAATTTCGCACCATATTCCAGCCACAGCACCTCCA...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAACTTCTTCAGTCCCTTaGCACAGACCCGGGGTATTC +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGTSSVP*HRPGVF
Trigger: GAATACCCCGGGTCTGTGCCAAGGGACTGAAGAAGT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR TCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCTGTGGCCGACTTGCATaGGAACTGGAACCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFCGRLA*ELEPWL
Trigger: GAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACA...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGCAGCAGCAGCGGCCTaGTGGCCAAAGATTGCAGCT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIAAAAA*WPKIAA
Trigger: AGCTGCAATCTTTGGCCATCAGGCCGCTGCTGCTGC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATTGATGATAAAGGTTaGCTTGGGGCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGIDDKG*LGAAAA
Trigger: CGCTGCTGCTGCCCCAAGTCAACCTTTATCATCAAT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGCTGTACTGGCTAAGTaGGTTGGTGGTGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHAVLAK*VGGGGA
Trigger: GGCACCCCCACCACCAACTCACTTAGCCAGTACAGC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACTCTGCATCACTTCATaGGGATGCAGTCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGLCITS*GCSLCA
Trigger: AGCACAGAGACTGCATCCTCATGAAGTGATGCAGAG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAAATTGTCCCCTGGGATaGTCCACGATTGACATTGCC +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGNCPLG*STIDIA
Trigger: GGCAATGTCAATCGTGGAGCATCCCAGGGGACAATT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGATCATTGGCAGTAACCTaGGGAGTGGAGGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGSLAVT*GVEEAS
Trigger: AGAAGCTTCCTCCACTCCCCAGGTTACTGCCAATGA...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCCTACTGCGGTTCCGTaGCTCCTGTGGCCGACTTGC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVPTAVP*LLWPTC
Trigger: GCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGATGTCCTAATGCATGGTaGTTCTGTGACGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGCPNAW*FCDDPP
Trigger: TGGAGGGTCGTCACAGAACCACCATGCATTAGGACA...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAAGGTGCTTGTACTTGTaGAGGTCTTTCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGRCLYL*RSFHRA
Trigger: TGCCCTGTGGAAAGACCTCCACAAGTACAAGCACCT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGCTGTGGCTGGAATATaGTGCGAAATTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGAVAGI*CEIGWC
Trigger: ACACCAGCCAATTTCGCACCATATTCCAGCCACAGC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGACCTATGTGGATGGGGTaGGGGGCGTTCATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGPMWMG*GAFMCP
Trigger: CGGGCACATGAACGCCCCCCACCCCATCCACATAGG...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCCCCATGACCATAGTTTaGGTGCATCCTATGTGGATG +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGPMTIV*VHPMWM
Trigger: CATCCACATAGGATGCACCCAAACTATGGTCATGGG...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCCTTTCAATTGTCCCCTaGGATGCTCCACGATTGACA +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGLSIVP*DAPRLT
Trigger: TGTCAATCGTGGAGCATCCCAGGGGACAATTGAAAG...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACACTTCCATGACTTCTaGTACCACTGTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGHFHDF*YHCCSG
Trigger: ACCTGAGCAACAGTGGTATCAGAAGTCATGGAAGTG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGCAGCAGCAGCGGCCTaGTGGCCAAAGATTGCAGCT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGAAAAA*WPKIAA
Trigger: AGCTGCAATCTTTGGCCATCAGGCCGCTGCTGCTGC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGCAGACATAGGTCACTaGCTCCTTCACTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFADIGH*LLHSPL
Trigger: CAGGGGAGAGTGAAGGAGTCAGTGACCTATGTCTGC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGTCTCCGTAACGAACTaGCATGTAAACAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGVSVTN*HVNRVF
Trigger: AAAGACCCTGTTTACATGGCAGTTCGTTACGGAGAC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCCTCCACATGGTGAGTaGTGGGGACAGCAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHPPHGE*WGQQEG
Trigger: ACCTTCCTGCTGTCCCCAGCACTCACCATGTGGAGG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCAGTTGGTGGTGGGGGTaGCACAGGATGAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFSWWWG*HRMRCC
Trigger: GCAACATCTCATCCTGTGGCACCCCCACCACCAACT...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGTGGCTGGAATATGGTaGGAAATTGGCTGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGVAGIW*EIGWCV
Trigger: TACACACCAGCCAATTTCGCACCATATTCCAGCCAC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTAGGATGCAGTCTCTGTaGTGGAGGTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIRMQSL*WRCCGW
Trigger: CCAGCCACAGCACCTCCAGCACAGAGACTGCATCCT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCCAAGTGAGGATGCAATaGACCAGGTGTATAAGTAGC +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGQVRMQ*TRCISS
Trigger: GCTACTTATACACCTGGTGCATTGCATCCTCACTTG...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCCAATGCTTCCAAATCTaGGCAGGTAAGTCATGCCAT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGQCFQI*AGKSCH
Trigger: ATGGCATGACTTACCTGCGCAGATTTGGAAGCATTG...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACTTCCCCATCTTGTTTaGAGTGCAGTTTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGLPHLV*SAVSSV
Trigger: CACAGAGGAAACTGCACTGCAAACAAGATGGGGAAG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557998.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGTTCCGTGGCTCCTGTaGCCGACTTGCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFVPWLL*PTCMRT
Trigger: AGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAAC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCCTACTGCGGTTCCGTaGCTCCTGTGGCCGACTTGC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQPTAVP*LLWPTC
Trigger: GCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAACTGGGACAGCTGGGTaGGGAGTATGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGTGTAG*GVWWWW
Trigger: CCACCACCACCATACTCCCCACCCAGCTGTCCCAGT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGACTGGGACAGCTGGGTaGGGAGTATGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVTGTAG*GVWWWW
Trigger: CCACCACCACCATACTCCCCACCCAGCTGTCCCAGT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCCTATGTGGATGGGGTaGGGGGCGTTCATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQPMWMG*GAFMCP
Trigger: CGGGCACATGAACGCCCCCCACCCCATCCACATAGG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCTGCTTTACTTGTATCTaGGGGAACGTCAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGCFTCI*GNVKRT
Trigger: AGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCA...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR CAA 72 bp TTCCAAATCTGCGCAGGTAAGTCATGCCATCTTTGGTaGACTGCAGTACCAGGAAGGATGGGAATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: FQICAGKSCHLW*TAVPGRMGMRG
Trigger: CCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCAGATTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGTCCGAGGCCACTTATaGGACCGTGCACTATGGCTT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHVRGHL*DRALWL
Trigger: AAGCCATAGTGCACGGTCTCATAAGTGGCCTCGGAC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGTGGCCGACTTGCATaGGAACTGGAACCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGCGRLA*ELEPWL
Trigger: GAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGTAGGAGGAAGATGCTaGGGGATTGGTGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFVGGRC*GIGAAV
Trigger: TACAGCTGCACCAATCCCTCAGCATCTTCCTCCTAC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACTCCTGTGTCTTTGGTaGATCAGAAGGAATCTCACT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGLLCLW*IRRNLT
Trigger: AGTGAGATTCCTTCTGATGCACCAAAGACACAGGAG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGATCTTTAACACAATTCTaGACATACGAAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGSLTQF*TYEGPA
Trigger: GGCTGGCCCTTCGTATGTGCAGAATTGTGTTAAAGA...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGACCTCCACATGGTGAGTaGTGGGGACAGCAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGPPHGE*WGQQEG
Trigger: ACCTTCCTGCTGTCCCCAGCACTCACCATGTGGAGG...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCACCAGAACTACTATTTaGTCCACAAGGTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGTRTTI*STRCLY
Trigger: GTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGT...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCTCTCTGTGCTGGAGGTaGTGTGGCTGGAATATGGTG +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFSLCWR*CGWNMV
Trigger: CACCATATTCCAGCCACAGCACCTCCAGCACAGAGA...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGAGGATGCAGTCTCTGTaGTGGAGGTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVRMQSL*WRCCGW
Trigger: CCAGCCACAGCACCTCCAGCACAGAGACTGCATCCT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTGTGCCCGCGTTGGATaGTGCATCATCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHCARVG*CIILLL
Trigger: AAGGAGGAGGATGATGCAGCATCCAACGCGGGCACA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000557998.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTGTGCCCGCGTTGGATaGTGCATCATCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCICARVG*CIILLL
Trigger: AAGGAGGAGGATGATGCAGCATCCAACGCGGGCACA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000557998.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAACTTGGTGGAAAAGGTaGATACATGGAAGACGTCTC +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGTWWKR*IHGRRL
Trigger: GAGACGTCTTCCATGTATGCACCTTTTCCACCAAGT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACAATGCTTCCAAATCTaGGCAGGTAAGTCATGCCAT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGQCFQI*AGKSCH
Trigger: ATGGCATGACTTACCTGCGCAGATTTGGAAGCATTG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGAAAAGGTGCATACATaGAAGACGTCTCACATCTTC +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGEKVHT*KTSHIF
Trigger: GAAGATGTGAGACGTCTTCCATGTATGCACCTTTTC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCTCAACACACACTTGGTaGAAAAGGTGCATACATGGA +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGSTHTW*KRCIHG
Trigger: TCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGA...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCCTTTCACTTGGCAGCTaGGCCTCAATGTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFLSLGS*ASMSTL
Trigger: CAGAGTGGACATTGAGGCCCAGCTGCCAAGTGAAAG...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAAAGTCATGCCATCTTTaGTTGACTGCAGTACCAGGA +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGKSCHL*LTAVPG
Trigger: TCCTGGTACTGCAGTCAACCAAAGATGGCATGACTT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCAAGAACTCCTTCTCTaGAGCTGCGGGCGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHQELLL*SCGRFY
Trigger: GTAGAAACGCCCGCAGCTTCAGAGAAGGAGTTCTTG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGGGTCCGGGAATCACTaGCCCAGGAAGGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQGSGNH*PRKEDR
Trigger: TCTGTCTTCCTTCCTGGGTCAGTGATTCCCGGACCC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR TCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGATTCATCAATACTTCCTaGGGGAACAGCTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGFINTS*GNSWIV
Trigger: AACAATCCAGCTGTTCCCTCAGGAAGTATTGATGAA...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGGAGTGTCCAAGGGTTaGACGAGACCGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHGVSKG*TRPIAF
Trigger: GAAAGCTATCGGTCTCGTTCAACCCTTGGACACTCC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTGGCCGACTTGCATaGGAACTGGAACCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQCGRLA*ELEPWL
Trigger: GAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACA...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGCTACTGGTGACAGCTaGAGCAGTATCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVATGDS*SSIRGL
Trigger: CAGGCCTCTGATACTGCTTCAGCTGTCACCAGTAGC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCAGATGTAGTTCTCCTTaGGTCATCTCCTATAGAAGT +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGRCSSP*VISYRS
Trigger: ACTTCTATAGGAGATGACTCAAGGAGAACTACATCT...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGAGCCTGTCGAGGATGTaGGGACATAGTCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVSLSRM*GHSLRH
Trigger: GTGCCTCAGACTATGTCCTCACATCCTCGACAGGCT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCTTATCTGCACTGTGTTaGAAGGAAAAGGATACACCA +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGLSALC*KEKDTP
Trigger: TGGTGTATCCTTTTCCTTTCAACACAGTGCAGATAA...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGCACACATACTATGTTaGAGCCTGTTAACATTGACA +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGAHILC*SLLTLT
Trigger: TGTCAATGTTAACAGGCTTCAACATAGTATGTGTGC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGCAGACATAGGTCACTaGCTCCTTCACTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVADIGH*LLHSPL
Trigger: CAGGGGAGAGTGAAGGAGTCAGTGACCTATGTCTGC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGACTCCTGTGGCCGACTTaGATGAGAACTGGAACCCTG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGLLWPT*MRTGTL
Trigger: CAGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAG...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGTCCACAACTTCTGCTaGATTCTGCCTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIVHNFC*ILPQGL
Trigger: CAGCCCTTGAGGCAGAATGCAGCAGAAGTTGTGGAC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGGGGCTGCGCAACCATaGTTGATCCATAGCCATCTA +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHGAAQP*LIHSHL
Trigger: TAGATGGCTATGGATCAAGCATGGTTGCGCAGCCCC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGGGGCTGCGCAACCATaGTTGATCCATAGCCATCTA +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIGAAQP*LIHSHL
Trigger: TAGATGGCTATGGATCAAGCATGGTTGCGCAGCCCC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCATGAAGTCGAGGAGGTaGGTGATAATGGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFMKSRR*VIMGQV
Trigger: CACTTGGCCCATTATCACGCACCTCCTCGACTTCAT...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGTGCCTCACAGTATCTaGAGATTTACTGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGVPHSI*RFTVFK
Trigger: CTTGAAAACAGTAAATCTGCAGATACTGTGAGGCAC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACTGACTGGATGCATTTaGAATCTGGGGCATATTAAG +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGLTGCI*NLGHIK
Trigger: CTTAATATGCCCCAGATTGCAAATGCATCCAGTCAG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGAGTCCATTGAGACATaGGAAACTTTAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGESIET*ETLRKA
Trigger: GGCTTTCCTTAAAGTTTCCCATGTCTCAATGGACTC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAACAGCTGGATTGTTTTaGTGGTTTTCACTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGTAGLF*WFSLAE
Trigger: TTCTGCCAGTGAAAACCACCAAAACAATCCAGCTGT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCTCATTGGCAGTAACCTaGGGAGTGGAGGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFSLAVT*GVEEAS
Trigger: AGAAGCTTCCTCCACTCCCCAGGTTACTGCCAATGA...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGACTTGCATGAGAACTaGAACCCTGGCTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFDLHEN*NPGSNE
Trigger: CTCATTGGAGCCAGGGTTCCAGTTCTCATGCAAGTC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGTTCCGTGGCTCCTGTaGCCGACTTGCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVVPWLL*PTCMRT
Trigger: AGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAAC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGATCTTGCAGAAGTGGTTaGTACTACAGTAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGSCRSG*YYSRFI
Trigger: GATGAACCTACTGTAGTACCAACCACTTCTGCAAGA...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGTTGCTCAGGTCCACTaGCAATGCCTGCTGTTCATG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIVAQVH*QCLLFM
Trigger: CATGAACAGCAGGCATTGCCAGTGGACCTGAGCAAC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCTGGTGCGAAATTGGCTaGTGTGTAGGAGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFWCEIG*CVGGRC
Trigger: GCATCTTCCTCCTACACACCAGCCAATTTCGCACCA...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTATGCAGTCTCTGTGCTaGAGGTGCTGTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIMQSLC*RCCGWN
Trigger: ATTCCAGCCACAGCACCTCCAGCACAGAGACTGCAT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTTCATGTGCCCGCGTTaGATGCTGCATCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHFMCPR*MLHHPP
Trigger: AGGAGGATGATGCAGCATCCAACGCGGGCACATGAA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000557998.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACCTATGTGGATGGGGTaGGGGGCGTTCATGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVPMWMG*GAFMCP
Trigger: CGGGCACATGAACGCCCCCCACCCCATCCACATAGG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCTTTCACTTGGCAGCTaGGCCTCAATGTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHLSLGS*ASMSTL
Trigger: CAGAGTGGACATTGAGGCCCAGCTGCCAAGTGAAAG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCTTTCACTTGGCAGCTaGGCCTCAATGTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCILSLGS*ASMSTL
Trigger: CAGAGTGGACATTGAGGCCCAGCTGCCAAGTGAAAG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGGAGTGTCCAAGGGTTaGACGAGACCGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGGVSKG*TRPIAF
Trigger: GAAAGCTATCGGTCTCGTTCAACCCTTGGACACTCC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCCACTTCCATGACTTCTaGTACCACTGTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFHFHDF*YHCCSG
Trigger: ACCTGAGCAACAGTGGTATCAGAAGTCATGGAAGTG...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGCAGCAGCAGCGGCCTaGTGGCCAAAGATTGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIAAAAA*WPKIAA
Trigger: AGCTGCAATCTTTGGCCATCAGGCCGCTGCTGCTGC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTATTGATGATAAAGGTTaGCTTGGGGCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIIDDKG*LGAAAA
Trigger: CGCTGCTGCTGCCCCAAGTCAACCTTTATCATCAAT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGCTGTACTGGCTAAGTaGGTTGGTGGTGGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVAVLAK*VGGGGA
Trigger: GGCACCCCCACCACCAACTCACTTAGCCAGTACAGC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGTAGGAGGAAGATGCTaGGGGATTGGTGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVVGGRC*GIGAAV
Trigger: TACAGCTGCACCAATCCCTCAGCATCTTCCTCCTAC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAGCCTGTCGAGGATGTaGGGACATAGTCTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQSLSRM*GHSLRH
Trigger: GTGCCTCAGACTATGTCCTCACATCCTCGACAGGCT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCATGCCATCTTTGGTTaGCTGCAGTACCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHHAIFG*LQYQEG
Trigger: TCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGGCGTGGGTTCAGAATaGCTAATTTGGTCCCACAAG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIGVGSE*LIWSHK
Trigger: CTTGTGGGACCAAATTAGGCATTCTGAACCCACGCC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGTCCACAACTTCTGCTaGATTCTGCCTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGVHNFC*ILPQGL
Trigger: CAGCCCTTGAGGCAGAATGCAGCAGAAGTTGTGGAC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGCAGTATCAGAGGCCTaGTCAGAGGTAGATGGATTT +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFAVSEA*SEVDGF
Trigger: AAATCCATCTACCTCTGAGCAGGCCTCTGATACTGC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCTGATGGCCAAAGATTaGAGCTCGGGAGGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCILMAKD*SSGGRN
Trigger: GTTTCTTCCTCCCGAGCTGCAATCTTTGGCCATCAG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTCTCTGTGCTGGAGGTaGTGTGGCTGGAATATGGTG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVSLCWR*CGWNMV
Trigger: CACCATATTCCAGCCACAGCACCTCCAGCACAGAGA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCCATCTTTGGTTGACTaGAGTACCAGGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIPSLVD*STRKDG
Trigger: CCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCAAACACAAATCGTCTaGGGAGACCCAGACCCTAAG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIQTQIV*GDPDPK
Trigger: CTTAGGGTCTGGGTCTCCGCAGACGATTTGTGTTTG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTGCCCCAATGGGCTCTaGATGCAAAAGGATCCCTTT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHCPNGL*MQKDPF
Trigger: AAAGGGATCCTTTTGCATCCAGAGCCCATTGGGGCA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTGCCCCAATGGGCTCTaGATGCAAAAGGATCCCTTT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCICPNGL*MQKDPF
Trigger: AAAGGGATCCTTTTGCATCCAGAGCCCATTGGGGCA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGACACTGTGGAAGGTTaGCTACTGGTGACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIDTVEG*LLVTAE
Trigger: TTCAGCTGTCACCAGTAGCCAACCTTCCACAGTGTC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGACACTGTGGAAGGTTaGCTACTGGTGACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHDTVEG*LLVTAE
Trigger: TTCAGCTGTCACCAGTAGCCAACCTTCCACAGTGTC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTGTCCTAATGCATGGTaGTTCTGTGACGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHCPNAW*FCDDPP
Trigger: TGGAGGGTCGTCACAGAACCACCATGCATTAGGACA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGGATGTCCTAATGCATaGTGGTTCTGTGACGACCCT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHGCPNA*WFCDDP
Trigger: AGGGTCGTCACAGAACCACCATGCATTAGGACATCC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGGATGTCCTAATGCATaGTGGTTCTGTGACGACCCT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIGCPNA*WFCDDP
Trigger: AGGGTCGTCACAGAACCACCATGCATTAGGACATCC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTACTGGGACAGCTGGGTaGGGAGTATGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHITGTAG*GVWWWW
Trigger: CCACCACCACCATACTCCCCACCCAGCTGTCCCAGT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGTTGCTCAGGTCCACTaGCAATGCCTGCTGTTCATG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVVAQVH*QCLLFM
Trigger: CATGAACAGCAGGCATTGCCAGTGGACCTGAGCAAC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTTGGTGCAGCTGTACTaGCTAAGTGAGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCILVQLY*LSELVV
Trigger: CACCACCAACTCACTTAGCCAGTACAGCTGCACCAA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTTGGTGCAGCTGTACTaGCTAAGTGAGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHLVQLY*LSELVV
Trigger: CACCACCAACTCACTTAGCCAGTACAGCTGCACCAA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTGGTGCGAAATTGGCTaGTGTGTAGGAGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIWCEIG*CVGGRC
Trigger: GCATCTTCCTCCTACACACCAGCCAATTTCGCACCA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGCTGTGGCTGGAATATaGTGCGAAATTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHAVAGI*CEIGWC
Trigger: ACACCAGCCAATTTCGCACCATATTCCAGCCACAGC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGTGCTGGAGGTGCTGTaGCTGGAATATGGTGCGAAA +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVVLEVL*LEYGAK
Trigger: TTTCGCACCATATTCCAGCCACAGCACCTCCAGCAC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATGCAGTCTCTGTGCTaGAGGTGCTGTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVMQSLC*RCCGWN
Trigger: ATTCCAGCCACAGCACCTCCAGCACAGAGACTGCAT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATTCATGTGCCCGCGTTaGATGCTGCATCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGFMCPR*MLHHPP
Trigger: AGGAGGATGATGCAGCATCCAACGCGGGCACATGAA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000557998.5
CDS-3UTR CCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCCTTTCAATTGTCCCCTaGGATGCTCCACGATTGACA +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFLSIVP*DAPRLT
Trigger: TGTCAATCGTGGAGCATCCCAGGGGACAATTGAAAG...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGTGTCAACTTTCACTTaGCAGCTGGGCCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHVSTFT*QLGLNV
Trigger: GACATTGAGGCCCAGCTGCCAAGTGAAAGTTGACAC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGTGTCAACTTTCACTTaGCAGCTGGGCCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIVSTFT*QLGLNV
Trigger: GACATTGAGGCCCAGCTGCCAAGTGAAAGTTGACAC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAAGTGATATTACTGACTaGATGCATTTGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGSDITD*MHLQSG
Trigger: CCCAGATTGCAAATGCATCCAGTCAGTAATATCACT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTAAGAGGATTCACTGCTaGGGTCATTCTCACTGGAAC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIKRIHC*GHSHWN
Trigger: GTTCCAGTGAGAATGACCTCAGCAGTGAATCCTCTT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCACTTCCATGACTTCTaGTACCACTGTTGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIHFHDF*YHCCSG
Trigger: ACCTGAGCAACAGTGGTATCAGAAGTCATGGAAGTG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGGAGGGCAAGAGTTCTaGAACATGGTGTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIGGQEF*NMVSTF
Trigger: GAAAGTTGACACCATGTTTCAGAACTCTTGCCCTCC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCTCTTTAACACAATTCTaGACATACGAAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFSLTQF*TYEGPA
Trigger: GGCTGGCCCTTCGTATGTGCAGAATTGTGTTAAAGA...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGGTGTCCCTAGGTGTTaGCTCAGTCCTAATATTCCC +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGGVPRC*LSPNIP
Trigger: GGGAATATTAGGACTGAGGCAACACCTAGGGACACC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGGTGTCCCTAGGTGTTaGCTCAGTCCTAATATTCCC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVGVPRC*LSPNIP
Trigger: GGGAATATTAGGACTGAGGCAACACCTAGGGACACC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAAAGGTCCACAACTTCTaGTGCATTCTGCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGKVHNF*CILPQG
Trigger: CCCTTGAGGCAGAATGCAGCAGAAGTTGTGGACCTT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTCCTCCACATGGTGAGTaGTGGGGACAGCAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIPPHGE*WGQQEG
Trigger: ACCTTCCTGCTGTCCCCAGCACTCACCATGTGGAGG...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCAGGTCCACTGGCAATaGCTGCTGTTCATGATAGCT +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVQVHWQ*LLFMIA
Trigger: AGCTATCATGAACAGCAGGCATTGCCAGTGGACCTG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGGGGTCAAATGCAGATaGTCCATGAAAACTGCCACT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHGVKCR*SMKTAT
Trigger: AGTGGCAGTTTTCATGGAGCATCTGCATTTGACCCC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCTGATGGCCAAAGATTaGAGCTCGGGAGGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVLMAKD*SSGGRN
Trigger: GTTTCTTCCTCCCGAGCTGCAATCTTTGGCCATCAG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAGGATGCAGTCTCTGTaGTGGAGGTGCTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVRMQSL*WRCCGW
Trigger: CCAGCCACAGCACCTCCAGCACAGAGACTGCATCCT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATGAAGTCGAGGAGGTaGGTGATAATGGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVMKSRR*VIMGQV
Trigger: CACTTGGCCCATTATCACGCACCTCCTCGACTTCAT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAAATTGTCCCCTGGGATaGTCCACGATTGACATTGCC +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGNCPLG*STIDIA
Trigger: GGCAATGTCAATCGTGGAGCATCCCAGGGGACAATT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCACTTGGTGGAAAAGGTaGATACATGGAAGACGTCTC +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFTWWKR*IHGRRL
Trigger: GAGACGTCTTCCATGTATGCACCTTTTCCACCAAGT...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCCATCTTTGGTTGACTaGAGTACCAGGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVPSLVD*STRKDG
Trigger: CCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGGTAGACGAATGCCTTaGCCAAACACAAATCGTCTG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIGRRMP*PNTNRL
Trigger: CAGACGATTTGTGTTTGGGCAAGGCATTCGTCTACC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGACTTGCATGAGAACTaGAACCCTGGCTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGDLHEN*NPGSNE
Trigger: CTCATTGGAGCCAGGGTTCCAGTTCTCATGCAAGTC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGACTTGCATGAGAACTaGAACCCTGGCTCCAATGAG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVDLHEN*NPGSNE
Trigger: CTCATTGGAGCCAGGGTTCCAGTTCTCATGCAAGTC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTGTCCTAATGCATGGTaGTTCTGTGACGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVCPNAW*FCDDPP
Trigger: TGGAGGGTCGTCACAGAACCACCATGCATTAGGACA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGGATGTCCTAATGCATaGTGGTTCTGTGACGACCCT +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVGCPNA*WFCDDP
Trigger: AGGGTCGTCACAGAACCACCATGCATTAGGACATCC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGAGGTGCTTGTACTTGTaGAGGTCTTTCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVRCLYL*RSFHRA
Trigger: TGCCCTGTGGAAAGACCTCCACAAGTACAAGCACCT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGCTGTGGCTGGAATATaGTGCGAAATTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVAVAGI*CEIGWC
Trigger: ACACCAGCCAATTTCGCACCATATTCCAGCCACAGC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTGGAGGTGCTGTGGCTaGAATATGGTGCGAAATTGG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVWRCCG*NMVRNW
Trigger: CCAATTTCGCACCATATTCCAGCCACAGCACCTCCA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGTGCTGGAGGTGCTGTaGCTGGAATATGGTGCGAAA +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQVLEVL*LEYGAK
Trigger: TTTCGCACCATATTCCAGCCACAGCACCTCCAGCAC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCCCATGACCATAGTTTaGGTGCATCCTATGTGGATG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIPMTIV*VHPMWM
Trigger: CATCCACATAGGATGCACCCAAACTATGGTCATGGG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCTTTCAATTGTCCCCTaGGATGCTCCACGATTGACA +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHLSIVP*DAPRLT
Trigger: TGTCAATCGTGGAGCATCCCAGGGGACAATTGAAAG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGTGTCAACTTTCACTTaGCAGCTGGGCCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVVSTFT*QLGLNV
Trigger: GACATTGAGGCCCAGCTGCCAAGTGAAAGTTGACAC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCCCGGGGTATTCCAGTaGCAAAGTAGTACATCCATT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHPGVFQ*QSSTSI
Trigger: AATGGATGTACTACTTTGCCACTGGAATACCCCGGG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGTTCATGTGCCCGCCTaGAAACACAGAACACAAAAA +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFVHVPA*KHRTQK
Trigger: TTTTTGTGTTCTGTGTTTCCAGGCGGGCACATGAAC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559209.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGAATCATCACACAGGTaGGAGAATTCATTCCCCACT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHESSHR*ENSFPT
Trigger: AGTGGGGAATGAATTCTCTCACCTGTGTGATGATTC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGTCCGAGGCCACTTATaGGACCGTGCACTATGGCTT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIVRGHL*DRALWL
Trigger: AAGCCATAGTGCACGGTCTCATAAGTGGCCTCGGAC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCTTCATCAATACTTCCTaGGGGAACAGCTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFFINTS*GNSWIV
Trigger: AACAATCCAGCTGTTCCCTCAGGAAGTATTGATGAA...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTAGCGCTAGTAGCTTGTaGTTCCATTCTTGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCISASSL*FHSCRS
Trigger: ACTTCTGCAAGAATGGAATCACAAGCTACTAGCGCT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGCTACTGGTGACAGCTaGAGCAGTATCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVATGDS*SSIRGL
Trigger: CAGGCCTCTGATACTGCTTCAGCTGTCACCAGTAGC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAAGGTTGGCTACTGGTaGCAGCTGAAGCAGTATCAG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQKVGYW*QLKQYQ
Trigger: CTGATACTGCTTCAGCTGTCACCAGTAGCCAACCTT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATAAACTGCCACTTCCATaGCTTCTGATACCACTGTTG +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHKLPLP*LLIPLL
Trigger: CAACAGTGGTATCAGAAGTCATGGAAGTGGCAGTTT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGATTGATGATAAAGGTTaGCTTGGGGCAGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQIDDKG*LGAAAA
Trigger: CGCTGCTGCTGCCCCAAGTCAACCTTTATCATCAAT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCTCTGCATCACTTCATaGGGATGCAGTCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQLCITS*GCSLCA
Trigger: AGCACAGAGACTGCATCCTCATGAAGTGATGCAGAG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGGGATGCTCCACGATTaGCATTGCCTAATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHGMLHD*HCLIFL
Trigger: AAGAAAGATTAGGCAATGTCAATCGTGGAGCATCCC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGGAGGGCAAGAGTTCTaGAACATGGTGTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVGGQEF*NMVSTF
Trigger: GAAAGTTGACACCATGTTTCAGAACTCTTGCCCTCC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAATCACTCTGGTGATGTaGCTACCACCTGCATCTGAT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGITLVM*LPPASD
Trigger: ATCAGATGCAGGTGGTAGTCACATCACCAGAGTGAT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTCTTTAACACAATTCTaGACATACGAAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHSLTQF*TYEGPA
Trigger: GGCTGGCCCTTCGTATGTGCAGAATTGTGTTAAAGA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGGTGTCCCTAGGTGTTaGCTCAGTCCTAATATTCCC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQGVPRC*LSPNIP
Trigger: GGGAATATTAGGACTGAGGCAACACCTAGGGACACC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGTCTCCGTAACGAACTaGCATGTAAACAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHVSVTN*HVNRVF
Trigger: AAAGACCCTGTTTACATGGCAGTTCGTTACGGAGAC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATACTTCTGCTGCATTCTaGCTCAAGGGCTGTATAACA +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHTSAAF*LKGCIT
Trigger: TGTTATACAGCCCTTGAGGCAGAATGCAGCAGAAGT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAAGGTCCACAACTTCTaGTGCATTCTGCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQKVHNF*CILPQG
Trigger: CCCTTGAGGCAGAATGCAGCAGAAGTTGTGGACCTT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGCAGTATCAGAGGCCTaGTCAGAGGTAGATGGATTT +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVAVSEA*SEVDGF
Trigger: AAATCCATCTACCTCTGAGCAGGCCTCTGATACTGC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATATTTGCTCCACAAGGTaGTTGTACTTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHICSTR*LYLWRS
Trigger: AGACCTCCACAAGTACAAGCACCTTGTGGAGCAAAT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGGGGTCAAATGCAGATaGTCCATGAAAACTGCCACT +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVGVKCR*SMKTAT
Trigger: AGTGGCAGTTTTCATGGAGCATCTGCATTTGACCCC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCTGATGGCCAAAGATTaGAGCTCGGGAGGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQLMAKD*SSGGRN
Trigger: GTTTCTTCCTCCCGAGCTGCAATCTTTGGCCATCAG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAGTTGGTGGTGGGGGTaGCACAGGATGAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVSWWWG*HRMRCC
Trigger: GCAACATCTCATCCTGTGGCACCCCCACCACCAACT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCAAGTGAGGATGCAATaGACCAGGTGTATAAGTAGC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHQVRMQ*TRCISS
Trigger: GCTACTTATACACCTGGTGCATTGCATCCTCACTTG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGATGAAGTCGAGGAGGTaGGTGATAATGGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQMKSRR*VIMGQV
Trigger: CACTTGGCCCATTATCACGCACCTCCTCGACTTCAT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAATTGTCCCCTGGGATaGTCCACGATTGACATTGCC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQNCPLG*STIDIA
Trigger: GGCAATGTCAATCGTGGAGCATCCCAGGGGACAATT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCCATCTTTGGTTGACTaGAGTACCAGGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQPSLVD*STRKDG
Trigger: CCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTGCGCAGGTAAGTCATaGCATCTTTGGTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVCAGKS*HLWLTA
Trigger: TGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCGCAGGTAAGTCATaGCATCTTTGGTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGCAGKS*HLWLTA
Trigger: TGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCTTCCCCATCTTGTTTaGAGTGCAGTTTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVLPHLV*SAVSSV
Trigger: CACAGAGGAAACTGCACTGCAAACAAGATGGGGAAG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557998.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGTGTCGGTAGACGAATaGCTTGCCCAAACACAAATC +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGVSVDE*LAQTQI
Trigger: GATTTGTGTTTGGGCAAGGCATTCGTCTACCGACAC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGGCTCCAATGAGATCTaGAGTGTCCAAGGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQGSNEI*SVQGLN
Trigger: GTTCAACCCTTGGACACTCCAGATCTCATTGGAGCC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGTTCCGTGGCTCCTGTaGCCGACTTGCATGAGAACT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIVPWLL*PTCMRT
Trigger: AGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAAC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTCCTAATGCATGGTaGTTCTGTGACGACCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQCPNAW*FCDDPP
Trigger: TGGAGGGTCGTCACAGAACCACCATGCATTAGGACA...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTAGAAACTGGGACAGCTaGGTGGGGAGTATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIRNWDS*VGSMVV
Trigger: CACCACCATACTCCCCACCCAGCTGTCCCAGTTTCT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAGAAACTGGGACAGCTaGGTGGGGAGTATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVRNWDS*VGSMVV
Trigger: CACCACCATACTCCCCACCCAGCTGTCCCAGTTTCT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTTGGTGCAGCTGTACTaGCTAAGTGAGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQLVQLY*LSELVV
Trigger: CACCACCAACTCACTTAGCCAGTACAGCTGCACCAA...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGAGGTGCTGTGGCTaGAATATGGTGCGAAATTGG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQWRCCG*NMVRNW
Trigger: CCAATTTCGCACCATATTCCAGCCACAGCACCTCCA...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGATGCATTTGCAATCTaGGGCATATTAAGCATATTT +
Preference number: 4 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGDAFAI*GILSIF
Trigger: AAATATGCTTAATATGCCCCAGATTGCAAATGCATC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCACAAAAAGACCAGTTaGATGCTGCATCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHHKKTS*MLHHPP
Trigger: AGGAGGATGATGCAGCATCCAACTGGTCTTTTTGTG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGTTCATGTGCCCGCCTaGAAACACAGAACACAAAAA +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIVHVPA*KHRTQK
Trigger: TTTTTGTGTTCTGTGTTTCCAGGCGGGCACATGAAC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAAGAGGATTCACTGCTaGGGTCATTCTCACTGGAAC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQKRIHC*GHSHWN
Trigger: GTTCCAGTGAGAATGACCTCAGCAGTGAATCCTCTT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTTCATCAATACTTCCTaGGGGAACAGCTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHFINTS*GNSWIV
Trigger: AACAATCCAGCTGTTCCCTCAGGAAGTATTGATGAA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGGAGTGTCCAAGGGTTaGACGAGACCGATAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVGVSKG*TRPIAF
Trigger: GAAAGCTATCGGTCTCGTTCAACCCTTGGACACTCC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCAGAGGTAGATGGATTTaGATTGTTAATGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFRGRWI*IVNGSA
Trigger: AGCGCTTCCATTAACAATTCAAATCCATCTACCTCT...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGAAACTGCCACTTCCATaGCTTCTGATACCACTGTTG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVKLPLP*LLIPLL
Trigger: CAACAGTGGTATCAGAAGTCATGGAAGTGGCAGTTT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGGGATGCTCCACGATTaGCATTGCCTAATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGGMLHD*HCLIFL
Trigger: AAGAAAGATTAGGCAATGTCAATCGTGGAGCATCCC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGGAGGGCAAGAGTTCTaGAACATGGTGTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQGGQEF*NMVSTF
Trigger: GAAAGTTGACACCATGTTTCAGAACTCTTGCCCTCC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATCTTTAACACAATTCTaGACATACGAAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGSLTQF*TYEGPA
Trigger: GGCTGGCCCTTCGTATGTGCAGAATTGTGTTAAAGA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCCACTTATGAGACCGTaGACTATGGCTTCTACTTTT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIPLMRP*TMASTF
Trigger: AAAAGTAGAAGCCATAGTGCACGGTCTCATAAGTGG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGTCCACAACTTCTGCTaGATTCTGCCTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVVHNFC*ILPQGL
Trigger: CAGCCCTTGAGGCAGAATGCAGCAGAAGTTGTGGAC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATACCAGAACTACTATTTaGTCCACAAGGTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHTRTTI*STRCLY
Trigger: GTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGTGGCTGGAATATGGTaGGAAATTGGCTGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQVAGIW*EIGWCV
Trigger: TACACACCAGCCAATTTCGCACCATATTCCAGCCAC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATCTCTGTGCTGGAGGTaGTGTGGCTGGAATATGGTG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVSLCWR*CGWNMV
Trigger: CACCATATTCCAGCCACAGCACCTCCAGCACAGAGA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATAGGTGTATAAGTAGCTaGAGTCACTCCAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHRCISS*SHSSFN
Trigger: ATTGAAGCTGGAGTGACTGCAGCTACTTATACACCT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCAAGTGAGGATGCAATaGACCAGGTGTATAAGTAGC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVQVRMQ*TRCISS
Trigger: GCTACTTATACACCTGGTGCATTGCATCCTCACTTG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCGCAGGTAAGTCATaGCATCTTTGGTTGACTGCA +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQCAGKS*HLWLTA
Trigger: TGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGAAAAGACCAGTTGGATaGTGCATCATCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVKRPVG*CIILLL
Trigger: AAGGAGGAGGATGATGCAGCATCCAACTGGTCTTTT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAAAAAGACCAGTTGGATaGTGCATCATCCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGKRPVG*CIILLL
Trigger: AAGGAGGAGGATGATGCAGCATCCAACTGGTCTTTT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTCAGAATGCCTAATTTaGTCCCACAAGAACTCCTTC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCISECLI*SHKNSF
Trigger: GAAGGAGTTCTTGTGGGACCAAATTAGGCATTCTGA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGAGTCCATTGAGACATaGGAAACTTTAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIESIET*ETLRKA
Trigger: GGCTTTCCTTAAAGTTTCCCATGTCTCAATGGACTC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTACAGCTGGATTGTTTTaGTGGTTTTCACTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCITAGLF*WFSLAE
Trigger: TTCTGCCAGTGAAAACCACCAAAACAATCCAGCTGT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTCTTGCAGAAGTGGTTaGTACTACAGTAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHSCRSG*YYSRFI
Trigger: GATGAACCTACTGTAGTACCAACCACTTCTGCAAGA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTCTTGCAGAAGTGGTTaGTACTACAGTAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCISCRSG*YYSRFI
Trigger: GATGAACCTACTGTAGTACCAACCACTTCTGCAAGA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGTTGCTCAGGTCCACTaGCAATGCCTGCTGTTCATG +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIVAQVH*QCLLFM
Trigger: CATGAACAGCAGGCATTGCCAGTGGACCTGAGCAAC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTAGCTTGATGATGAAGTaGCCTTGTCAAAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCISLMMK*PCQRGI
Trigger: TATGCCTCTTTGACAAGGCCACTTCATCATCAAGCT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGAATATGGTGCGAAATTaGCTGGTGTGTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVNMVRN*LVCRRK
Trigger: CTTCCTCCTACACACCAGCCAATTTCGCACCATATT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAAATATGGTGCGAAATTaGCTGGTGTGTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGNMVRN*LVCRRK
Trigger: CTTCCTCCTACACACCAGCCAATTTCGCACCATATT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGTGCTGGAGGTGCTGTaGCTGGAATATGGTGCGAAA +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIVLEVL*LEYGAK
Trigger: TTTCGCACCATATTCCAGCCACAGCACCTCCAGCAC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGTGCTGGAGGTGCTGTaGCTGGAATATGGTGCGAAA +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVVLEVL*LEYGAK
Trigger: TTTCGCACCATATTCCAGCCACAGCACCTCCAGCAC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTATGCAGTCTCTGTGCTaGAGGTGCTGTGGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIMQSLC*RCCGWN
Trigger: ATTCCAGCCACAGCACCTCCAGCACAGAGACTGCAT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGAAAAGGTGCATACATaGAAGACGTCTCACATCTTC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIEKVHT*KTSHIF
Trigger: GAAGATGTGAGACGTCTTCCATGTATGCACCTTTTC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTCAACACACACTTGGTaGAAAAGGTGCATACATGGA +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHSTHTW*KRCIHG
Trigger: TCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTCAACACACACTTGGTaGAAAAGGTGCATACATGGA +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCISTHTW*KRCIHG
Trigger: TCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTTGGTAATCAACCATTaGTCAACACACACTTGGTGG +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHLVINH*STHTWW
Trigger: CCACCAAGTGTGTGTTGACCAATGGTTGATTACCAA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCCCGGGGTATTCCAGTaGCAAAGTAGTACATCCATT +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQPGVFQ*QSSTSI
Trigger: AATGGATGTACTACTTTGCCACTGGAATACCCCGGG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTAGATGCAGCAGGATATaGAAGACACCAAAACAAAGC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIRCSRI*KTPKQS
Trigger: GCTTTGTTTTGGTGTCTTCCATATCCTGCTGCATCT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGACACAAAAAGACCAGTTaGATGCTGCATCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGHKKTS*MLHHPP
Trigger: AGGAGGATGATGCAGCATCCAACTGGTCTTTTTGTG...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGAATCATCACACAGGTaGGAGAATTCATTCCCCACT +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQESSHR*ENSFPT
Trigger: AGTGGGGAATGAATTCTCTCACCTGTGTGATGATTC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAGCGCTAGTAGCTTGTaGTTCCATTCTTGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQSASSL*FHSCRS
Trigger: ACTTCTGCAAGAATGGAATCACAAGCTACTAGCGCT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATAGAGGTAGATGGATTTaGATTGTTAATGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHRGRWI*IVNGSA
Trigger: AGCGCTTCCATTAACAATTCAAATCCATCTACCTCT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAAGGTTGGCTACTGGTaGCAGCTGAAGCAGTATCAG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVKVGYW*QLKQYQ
Trigger: CTGATACTGCTTCAGCTGTCACCAGTAGCCAACCTT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAAACTGCCACTTCCATaGCTTCTGATACCACTGTTG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQKLPLP*LLIPLL
Trigger: CAACAGTGGTATCAGAAGTCATGGAAGTGGCAGTTT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACTCTGCATCACTTCATaGGGATGCAGTCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVLCITS*GCSLCA
Trigger: AGCACAGAGACTGCATCCTCATGAAGTGATGCAGAG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACATGCCATCTTTGGTTaGCTGCAGTACCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVHAIFG*LQYQEG
Trigger: TCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTACTACCACCTGCATCTaGTTTATATGGGTTGTATTC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCITTTCI*FIWVVF
Trigger: GAATACAACCCATATAAATCAGATGCAGGTGGTAGT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTTATCTGCACTGTGTTaGAAGGAAAAGGATACACCA +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHLSALC*KEKDTP
Trigger: TGGTGTATCCTTTTCCTTTCAACACAGTGCAGATAA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTTATCTGCACTGTGTTaGAAGGAAAAGGATACACCA +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCILSALC*KEKDTP
Trigger: TGGTGTATCCTTTTCCTTTCAACACAGTGCAGATAA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTTCCTTCACTCTCCCCTaGCCTTCTATAACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHISFTLP*PSITSV
Trigger: AACCGAGGTTATAGAAGGTCAGGGGAGAGTGAAGGA...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCCACTTATGAGACCGTaGACTATGGCTTCTACTTTT +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVPLMRP*TMASTF
Trigger: AAAAGTAGAAGCCATAGTGCACGGTCTCATAAGTGG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGACCACTTATGAGACCGTaGACTATGGCTTCTACTTTT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGPLMRP*TMASTF
Trigger: AAAAGTAGAAGCCATAGTGCACGGTCTCATAAGTGG...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGACTTCTGCTGCATTCTaGCTCAAGGGCTGTATAACA +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQTSAAF*LKGCIT
Trigger: TGTTATACAGCCCTTGAGGCAGAATGCAGCAGAAGT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTAAGGTCCACAACTTCTaGTGCATTCTGCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIKVHNF*CILPQG
Trigger: CCCTTGAGGCAGAATGCAGCAGAAGTTGTGGACCTT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGATTTGCTCCACAAGGTaGTTGTACTTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQICSTR*LYLWRS
Trigger: AGACCTCCACAAGTACAAGCACCTTGTGGAGCAAAT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGACCAGAACTACTATTTaGTCCACAAGGTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVTRTTI*STRCLY
Trigger: GTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTCAGGTCCACTGGCAATaGCTGCTGTTCATGATAGCT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIQVHWQ*LLFMIA
Trigger: AGCTATCATGAACAGCAGGCATTGCCAGTGGACCTG...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACAGGTCCACTGGCAATaGCTGCTGTTCATGATAGCT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVQVHWQ*LLFMIA
Trigger: AGCTATCATGAACAGCAGGCATTGCCAGTGGACCTG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTATGAAGTCGAGGAGGTaGGTGATAATGGGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIMKSRR*VIMGQV
Trigger: CACTTGGCCCATTATCACGCACCTCCTCGACTTCAT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAATTGTCCCCTGGGATaGTCCACGATTGACATTGCC +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVNCPLG*STIDIA
Trigger: GGCAATGTCAATCGTGGAGCATCCCAGGGGACAATT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGACTTGGTGGAAAAGGTaGATACATGGAAGACGTCTC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQTWWKR*IHGRRL
Trigger: GAGACGTCTTCCATGTATGCACCTTTTCCACCAAGT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGTGCCTCACAGTATCTaGAGATTTACTGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIVPHSI*RFTVFK
Trigger: CTTGAAAACAGTAAATCTGCAGATACTGTGAGGCAC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGACTGACTGGATGCATTTaGAATCTGGGGCATATTAAG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGLTGCI*NLGHIK
Trigger: CTTAATATGCCCCAGATTGCAAATGCATCCAGTCAG...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTATATTACTGACTGGATaGATTTGCAATCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIILLTG*ICNLGH
Trigger: ATGCCCCAGATTGCAAATGCATCCAGTCAGTAATAT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTAATCCATCGTCCATCTaGACACATACTATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCINPSSI*THTMLK
Trigger: CTTCAACATAGTATGTGTGCAGATGGACGATGGATT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATGCCCCAATGGGCTCTaGATGCAAAAGGATCCCTTT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVCPNGL*MQKDPF
Trigger: AAAGGGATCCTTTTGCATCCAGAGCCCATTGGGGCA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTTGCCCCAATGGGCTCTaGATGCAAAAGGATCCCTTT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHICPNGL*MQKDPF
Trigger: AAAGGGATCCTTTTGCATCCAGAGCCCATTGGGGCA...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGCATTCAAAATGGTCTaGGAATGTCTTACAGAGACT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIAFKMV*ECLTET
Trigger: AGTCTCTGTAAGACATTCCCAGACCATTTTGAATGC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGACAGCTGGATTGTTTTaGTGGTTTTCACTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVTAGLF*WFSLAE
Trigger: TTCTGCCAGTGAAAACCACCAAAACAATCCAGCTGT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTTCATTGGCAGTAACCTaGGGAGTGGAGGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHISLAVT*GVEEAS
Trigger: AGAAGCTTCCTCCACTCCCCAGGTTACTGCCAATGA...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATCTTGCAGAAGTGGTTaGTACTACAGTAGGTTCATC +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGSCRSG*YYSRFI
Trigger: GATGAACCTACTGTAGTACCAACCACTTCTGCAAGA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGACACTGTGGAAGGTTaGCTACTGGTGACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIDTVEG*LLVTAE
Trigger: TTCAGCTGTCACCAGTAGCCAACCTTCCACAGTGTC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAGGTGCTTGTACTTGTaGAGGTCTTTCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVRCLYL*RSFHRA
Trigger: TGCCCTGTGGAAAGACCTCCACAAGTACAAGCACCT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAAGCTTGATGATGAAGTaGCCTTGTCAAAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGSLMMK*PCQRGI
Trigger: TATGCCTCTTTGACAAGGCCACTTCATCATCAAGCT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATTGGTGCAGCTGTACTaGCTAAGTGAGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVLVQLY*LSELVV
Trigger: CACCACCAACTCACTTAGCCAGTACAGCTGCACCAA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGCTGTGGCTGGAATATaGTGCGAAATTGGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIAVAGI*CEIGWC
Trigger: ACACCAGCCAATTTCGCACCATATTCCAGCCACAGC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATGGAGGTGCTGTGGCTaGAATATGGTGCGAAATTGG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVWRCCG*NMVRNW
Trigger: CCAATTTCGCACCATATTCCAGCCACAGCACCTCCA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGTGTCAACTTTCACTTaGCAGCTGGGCCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIVSTFT*QLGLNV
Trigger: GACATTGAGGCCCAGCTGCCAAGTGAAAGTTGACAC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATAGTGATATTACTGACTaGATGCATTTGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHSDITD*MHLQSG
Trigger: CCCAGATTGCAAATGCATCCAGTCAGTAATATCACT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCACTTACAAAGCAGGTaGCTTAATGCAAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHHLQSR*LNASLL
Trigger: CAATAAGCTTGCATTAAGCCACCTGCTTTGTAAGTG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
3UTR CAA 72 bp ATCCACTTACAAAGCAGGTGGCTTAATGCAAGCTTATaGACATCTTCACATATGATCCATGGGAACATGTCC +
Preference number: 4 (lower is better)
Translates to: IHLQSRWLNASL*TSSHMIHGNMS
Trigger: GGACATGTTCCCATGGATCATATGTGAAGATGTCAATAAGCTTGCATTAAGCCACCTGCTTTGTAAGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTTCTTTATCCTCATCTaGAGTCACAGTATCAGAATC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHFFILI*SHSIRI
Trigger: GATTCTGATACTGTGACTTCAGATGAGGATAAAGAA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTTCTTTATCCTCATCTaGAGTCACAGTATCAGAATC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIFFILI*SHSIRI
Trigger: GATTCTGATACTGTGACTTCAGATGAGGATAAAGAA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTAAGAGGATTCACTGCTaGGGTCATTCTCACTGGAAC +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIKRIHC*GHSHWN
Trigger: GTTCCAGTGAGAATGACCTCAGCAGTGAATCCTCTT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAAGAGGATTCACTGCTaGGGTCATTCTCACTGGAAC +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVKRIHC*GHSHWN
Trigger: GTTCCAGTGAGAATGACCTCAGCAGTGAATCCTCTT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCACTTCACTGTCAGTTaGGGTAACATTAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIHFTVS*GNINFF
Trigger: GAAGAAATTAATGTTACCTCAACTGACAGTGAAGTG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAAGAGGTAGATGGATTTaGATTGTTAATGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGRGRWI*IVNGSA
Trigger: AGCGCTTCCATTAACAATTCAAATCCATCTACCTCT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAAGATGTAGTTCTCCTTaGGTCATCTCCTATAGAAGT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGRCSSP*VISYRS
Trigger: ACTTCTATAGGAGATGACTCAAGGAGAACTACATCT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGGAGGGCAAGAGTTCTaGAACATGGTGTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVGGQEF*NMVSTF
Trigger: GAAAGTTGACACCATGTTTCAGAACTCTTGCCCTCC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAACTACCACCTGCATCTaGTTTATATGGGTTGTATTC +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGTTTCI*FIWVVF
Trigger: GAATACAACCCATATAAATCAGATGCAGGTGGTAGT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAATCACTCTGGTGATGTaGCTACCACCTGCATCTGAT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVITLVM*LPPASD
Trigger: ATCAGATGCAGGTGGTAGTCACATCACCAGAGTGAT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCACAGCAGCAAAAACTaGATCAGGGAAATAAAATTC +
Preference number: 4 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHHSSKN*IREIKF
Trigger: GAATTTTATTTCCCTGATTCAGTTTTTGCTGCTGTG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATAGCAACAGTAGGTTaGCAGTATAATTTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVIATVG*QYNLCL
Trigger: GAGGCACAAATTATACTGTCAACCTACTGTTGCTAT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGCAGTATCAGAGGCCTaGTCAGAGGTAGATGGATTT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVAVSEA*SEVDGF
Trigger: AAATCCATCTACCTCTGAGCAGGCCTCTGATACTGC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGGGGTCAAATGCAGATaGTCCATGAAAACTGCCACT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIGVKCR*SMKTAT
Trigger: AGTGGCAGTTTTCATGGAGCATCTGCATTTGACCCC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGTGGCTGGAATATGGTaGGAAATTGGCTGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIVAGIW*EIGWCV
Trigger: TACACACCAGCCAATTTCGCACCATATTCCAGCCAC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGTGGCTGGAATATGGTaGGAAATTGGCTGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVVAGIW*EIGWCV
Trigger: TACACACCAGCCAATTTCGCACCATATTCCAGCCAC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAGGTGTATAAGTAGCTaGAGTCACTCCAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQRCISS*SHSSFN
Trigger: ATTGAAGCTGGAGTGACTGCAGCTACTTATACACCT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGTGCCTCACAGTATCTaGAGATTTACTGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGVPHSI*RFTVFK
Trigger: CTTGAAAACAGTAAATCTGCAGATACTGTGAGGCAC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCTGACTGGATGCATTTaGAATCTGGGGCATATTAAG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQLTGCI*NLGHIK
Trigger: CTTAATATGCCCCAGATTGCAAATGCATCCAGTCAG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAAATCCATCGTCCATCTaGACACATACTATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGNPSSI*THTMLK
Trigger: CTTCAACATAGTATGTGTGCAGATGGACGATGGATT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGAGTCCATTGAGACATaGGAAACTTTAAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQESIET*ETLRKA
Trigger: GGCTTTCCTTAAAGTTTCCCATGTCTCAATGGACTC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGACAGCTGGATTGTTTTaGTGGTTTTCACTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQTAGLF*WFSLAE
Trigger: TTCTGCCAGTGAAAACCACCAAAACAATCCAGCTGT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGCTGTTCATGATAGCTaGTACCAGAACTACTATTTG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGAVHDS*YQNYYL
Trigger: CAAATAGTAGTTCTGGTACCAGCTATCATGAACAGC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGCTGTTCATGATAGCTaGTACCAGAACTACTATTTG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVAVHDS*YQNYYL
Trigger: CAAATAGTAGTTCTGGTACCAGCTATCATGAACAGC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAGCTTGATGATGAAGTaGCCTTGTCAAAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQSLMMK*PCQRGI
Trigger: TATGCCTCTTTGACAAGGCCACTTCATCATCAAGCT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGAAAAGGTGCATACATaGAAGACGTCTCACATCTTC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQEKVHT*KTSHIF
Trigger: GAAGATGTGAGACGTCTTCCATGTATGCACCTTTTC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGAAGAGTTCTGAAACATaGTGTCAACTTTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVKSSET*CQLSLG
Trigger: GCCAAGTGAAAGTTGACACCATGTTTCAGAACTCTT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAAGTGATATTACTGACTaGATGCATTTGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGSDITD*MHLQSG
Trigger: CCCAGATTGCAAATGCATCCAGTCAGTAATATCACT...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGAGTGATATTACTGACTaGATGCATTTGCAATCTGGG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVSDITD*MHLQSG
Trigger: CCCAGATTGCAAATGCATCCAGTCAGTAATATCACT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATTCACATATGATCCATaGGAACATGTCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGFTYDP*EHVLHI
Trigger: TATGTGGAGGACATGTTCCCATGGATCATATGTGAA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCACTTCACTGTCAGTTaGGGTAACATTAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVHFTVS*GNINFF
Trigger: GAAGAAATTAATGTTACCTCAACTGACAGTGAAGTG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAGCGCTAGTAGCTTGTaGTTCCATTCTTGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVSASSL*FHSCRS
Trigger: ACTTCTGCAAGAATGGAATCACAAGCTACTAGCGCT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTAGCGCTAGTAGCTTGTaGTTCCATTCTTGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHISASSL*FHSCRS
Trigger: ACTTCTGCAAGAATGGAATCACAAGCTACTAGCGCT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAGATGTAGTTCTCCTTaGGTCATCTCCTATAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQRCSSP*VISYRS
Trigger: ACTTCTATAGGAGATGACTCAAGGAGAACTACATCT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGGGATGCTCCACGATTaGCATTGCCTAATCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIGMLHD*HCLIFL
Trigger: AAGAAAGATTAGGCAATGTCAATCGTGGAGCATCCC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTTATCTGCACTGTGTTaGAAGGAAAAGGATACACCA +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQLSALC*KEKDTP
Trigger: TGGTGTATCCTTTTCCTTTCAACACAGTGCAGATAA...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCTGAAATGTTCATTTTaGCATATAAGATGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVLKCSF*HIRCSR
Trigger: CCTGCTGCATCTTATATGTCAAAATGAACATTTCAG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGTGCAGTTTCCTCTGTaGGAACCAATCAGTTGTTAC +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVVQFPL*EPISCY
Trigger: GTAACAACTGATTGGTTCTCACAGAGGAAACTGCAC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557998.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACTCCTGTGTCTTTGGTaGATCAGAAGGAATCTCACT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVLLCLW*IRRNLT
Trigger: AGTGAGATTCCTTCTGATGCACCAAAGACACAGGAG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGTCTCCGTAACGAACTaGCATGTAAACAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIVSVTN*HVNRVF
Trigger: AAAGACCCTGTTTACATGGCAGTTCGTTACGGAGAC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAACTTCTGCTGCATTCTaGCTCAAGGGCTGTATAACA +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVTSAAF*LKGCIT
Trigger: TGTTATACAGCCCTTGAGGCAGAATGCAGCAGAAGT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAATTTGCTCCACAAGGTaGTTGTACTTGTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVICSTR*LYLWRS
Trigger: AGACCTCCACAAGTACAAGCACCTTGTGGAGCAAAT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTCAAGTGAGGATGCAATaGACCAGGTGTATAAGTAGC +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIQVRMQ*TRCISS
Trigger: GCTACTTATACACCTGGTGCATTGCATCCTCACTTG...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACAATGCTTCCAAATCTaGGCAGGTAAGTCATGCCAT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVQCFQI*AGKSCH
Trigger: ATGGCATGACTTACCTGCGCAGATTTGGAAGCATTG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGATATTACTGACTGGATaGATTTGCAATCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQILLTG*ICNLGH
Trigger: ATGCCCCAGATTGCAAATGCATCCAGTCAGTAATAT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAGAGAAATCCACCTGTaGTTTACTTGTATCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVREIHL*FTCIWG
Trigger: CCCCCAGATACAAGTAAAGCACAGGTGGATTTCTCT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTACTCTCCTGTGTCTTTaGTGCATCAGAAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHITLLCL*CIRRNL
Trigger: GAGATTCCTTCTGATGCACCAAAGACACAGGAGAGT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGCATTCAAAATGGTCTaGGAATGTCTTACAGAGACT +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQAFKMV*ECLTET
Trigger: AGTCTCTGTAAGACATTCCCAGACCATTTTGAATGC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGCTGTTCATGATAGCTaGTACCAGAACTACTATTTG +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQAVHDS*YQNYYL
Trigger: CAAATAGTAGTTCTGGTACCAGCTATCATGAACAGC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAATATGGTGCGAAATTaGCTGGTGTGTAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVNMVRN*LVCRRK
Trigger: CTTCCTCCTACACACCAGCCAATTTCGCACCATATT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGATGCATTTGCAATCTaGGGCATATTAAGCATATTT +
Preference number: 4 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIDAFAI*GILSIF
Trigger: AAATATGCTTAATATGCCCCAGATTGCAAATGCATC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTTCACATATGATCCATaGGAACATGTCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQFTYDP*EHVLHI
Trigger: TATGTGGAGGACATGTTCCCATGGATCATATGTGAA...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATGCTTTACTTGTATCTaGGGGAACGTCAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVCFTCI*GNVKRT
Trigger: AGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
3UTR CAA 72 bp AAGACCACAAAATTCTACTTACTAAAGCAGCTAACCTaGCCTGCAAGTTTAGGGTCACAAGCCCATAATATG +
Preference number: 4 (lower is better)
Translates to: KTTKFYLLKQLT*PASLGSQAHNM
Trigger: CATATTATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAATTTTGTGGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTTCTTTATCCTCATCTaGAGTCACAGTATCAGAATC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQFFILI*SHSIRI
Trigger: GATTCTGATACTGTGACTTCAGATGAGGATAAAGAA...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTTTCATCAATACTTCCTaGGGGAACAGCTGGATTGTT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIFINTS*GNSWIV
Trigger: AACAATCCAGCTGTTCCCTCAGGAAGTATTGATGAA...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCACAGCAGCAAAAACTaGATCAGGGAAATAAAATTC +
Preference number: 4 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQHSSKN*IREIKF
Trigger: GAATTTTATTTCCCTGATTCAGTTTTTGCTGCTGTG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAACCAGAACTACTATTTaGTCCACAAGGTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVTRTTI*STRCLY
Trigger: GTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAGGTGTATAAGTAGCTaGAGTCACTCCAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVRCISS*SHSSFN
Trigger: ATTGAAGCTGGAGTGACTGCAGCTACTTATACACCT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTAGCTTGATGATGAAGTaGCCTTGTCAAAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHISLMMK*PCQRGI
Trigger: TATGCCTCTTTGACAAGGCCACTTCATCATCAAGCT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTTTGGTAATCAACCATTaGTCAACACACACTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHILVINH*STHTWW
Trigger: CCACCAAGTGTGTGTTGACCAATGGTTGATTACCAA...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGATGCATTTGCAATCTaGGGCATATTAAGCATATTT +
Preference number: 4 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGDAFAI*GILSIF
Trigger: AAATATGCTTAATATGCCCCAGATTGCAAATGCATC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTAGAGGTAGATGGATTTaGATTGTTAATGGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIRGRWI*IVNGSA
Trigger: AGCGCTTCCATTAACAATTCAAATCCATCTACCTCT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAATAGCAACAGTAGGTTaGCAGTATAATTTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVIATVG*QYNLCL
Trigger: GAGGCACAAATTATACTGTCAACCTACTGTTGCTAT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGCACACATACTATGTTaGAGCCTGTTAACATTGACA +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVAHILC*SLLTLT
Trigger: TGTCAATGTTAACAGGCTTCAACATAGTATGTGTGC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR GCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAATATTACTGACTGGATaGATTTGCAATCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVILLTG*ICNLGH
Trigger: ATGCCCCAGATTGCAAATGCATCCAGTCAGTAATAT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGCATTCAAAATGGTCTaGGAATGTCTTACAGAGACT +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIAFKMV*ECLTET
Trigger: AGTCTCTGTAAGACATTCCCAGACCATTTTGAATGC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAAGAGTTCTGAAACATaGTGTCAACTTTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVKSSET*CQLSLG
Trigger: GCCAAGTGAAAGTTGACACCATGTTTCAGAACTCTT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATTCACATATGATCCATaGGAACATGTCCTCCACATA +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVFTYDP*EHVLHI
Trigger: TATGTGGAGGACATGTTCCCATGGATCATATGTGAA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACACTTACAAAGCAGGTaGCTTAATGCAAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVHLQSR*LNASLL
Trigger: CAATAAGCTTGCATTAAGCCACCTGCTTTGTAAGTG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTCACTTACAAAGCAGGTaGCTTAATGCAAGCTTATTG +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIHLQSR*LNASLL
Trigger: CAATAAGCTTGCATTAAGCCACCTGCTTTGTAAGTG...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR TCA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTCACTTCACTGTCAGTTaGGGTAACATTAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: TVILLTGCICNLGHIKHIHFTVS*GNINFF
Trigger: GAAGAAATTAATGTTACCTCAACTGACAGTGAAGTG...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 90 bp CGCTGCGCAAACCGAACACCTCCTCGCCGTCGCCGCCACTGCCGCTaGTCCCCTACAGCCGCCGCCGCCGCTTCGCCGCCGCCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: RCANRTPPRRRRHCR*SPTAAAAASPPPPP
Trigger: AGGCGGCGGCGGCGGCGAAGCGGCGGCGGCGGCTGTAGGGGAGCAGCGGCAGTGGCGGCGACGGCGAGGAGGTGTTCGGTTTGCGCAGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559160.1
CDS GCA 90 bp TTTCTACGCTGCGCAAACCGAACACCTCCTCGCCGTCGCCGCCACTaGCGCTGCTCCCCTACAGCCGCCGCCGCCGCTTCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: FLRCANRTPPRRRRH*RCSPTAAAAASPPP
Trigger: CGGCGGCGGCGAAGCGGCGGCGGCGGCTGTAGGGGAGCAGCGGCAGTGGCGGCGACGGCGAGGAGGTGTTCGGTTTGCGCAGCGTAGAAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559160.1
CDS GCA 90 bp GGTCCCACAAGAACTCCTTCTCTGAAGCTGCGGGCGTTTCTACGCTaGGCAAACCGAACACCTCCTCGCCGTCGCCGCCACTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: GPTRTPSLKLRAFLR*ANRTPPRRRRHCRC
Trigger: GCAGCGGCAGTGGCGGCGACGGCGAGGAGGTGTTCGGTTTGCGCAGCGTAGAAACGCCCGCAGCTTCAGAGAAGGAGTTCTTGTGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559160.1
CDS TCA 90 bp CATTGTCAAATCGCACTCCCACGCCTCGGTCCTCAGCCCCCATCCTaGGACTCTAGGGAGAGTCGGAAGTGGGAGAGAAATCCCCTCACC +
Preference number: 5 (lower is better)
Translates to: HCQIALPRLGPQPPS*DSRESRKWERNPLT
Trigger: GGTGAGGGGATTTCTCTCCCACTTCCGACTCTCCCTAGAGTCTCAGGATGGGGGCTGAGGACCGAGGCGTGGGAGTGCGATTTGACAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS CCA 90 bp TCCTACTGCGGTTCCGTGGCTCCTGTGGCCGACTTGCATGAGAACTaGAACCCTGGCTCCAATGAGATCTGGAGTGTCCAAGGGTTGAAC +
Preference number: 5 (lower is better)
Translates to: SYCGSVAPVADLHEN*NPGSNEIWSVQGLN
Trigger: GTTCAACCCTTGGACACTCCAGATCTCATTGGAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CCA 90 bp CCTAATGCATGGTGGTTCTGTGACGACCCTCCACATGGTGAGTGCTaGGGACAGCAGGAAGGTAACCTTGGCATTGCAGGAGGGCCAGTT +
Preference number: 5 (lower is better)
Translates to: PNAWWFCDDPPHGEC*GQQEGNLGIAGGPV
Trigger: AACTGGCCCTCCTGCAATGCCAAGGTTACCTTCCTGCTGTCCCCAGCACTCACCATGTGGAGGGTCGTCACAGAACCACCATGCATTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CCA 90 bp ATGATGCCCATGACCATAGTTTGGGTGCATCCTATGTGGATGGGGTaGGGGGCGTTCATGTGCCCGCGTTGGATGCTGCATCATCCTCCT +
Preference number: 5 (lower is better)
Translates to: MMPMTIVWVHPMWMG*GAFMCPRWMLHHPP
Trigger: AGGAGGATGATGCAGCATCCAACGCGGGCACATGAACGCCCCCCACCCCATCCACATAGGATGCACCCAAACTATGGTCATGGGCATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000558977.1
CDS CCA 90 bp CTGCCTCAAGGGCTGTATAACAGTAGAAATCCTACTGCGGTTCCGTaGCTCCTGTGGCCGACTTGCATGAGAACTGGAACCCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: LPQGLYNSRNPTAVP*LLWPTCMRTGTLAP
Trigger: TGGAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGGATTTCTACTGTTATACAGCCCTTGAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS TCA 90 bp CGTGGGTTCAGAATGCCTAATTTGGTCCCACAAGAACTCCTTCTCTaGAGCTGCGGGCGTTTCTACGCTGCGCAAACCGAACACCTCCTC +
Preference number: 5 (lower is better)
Translates to: RGFRMPNLVPQELLL*SCGRFYAAQTEHLL
Trigger: GAGGAGGTGTTCGGTTTGCGCAGCGTAGAAACGCCCGCAGCTTCAGAGAAGGAGTTCTTGTGGGACCAAATTAGGCATTCTGAACCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559160.1
CDS GCA 90 bp AACAGTAGAAATCCTACTGCGGTTCCGTGGCTCCTGTGGCCGACTTaGATGAGAACTGGAACCCTGGCTCCAATGAGATCTGGAGTGTCC +
Preference number: 5 (lower is better)
Translates to: NSRNPTAVPWLLWPT*MRTGTLAPMRSGVS
Trigger: GGACACTCCAGATCTCATTGGAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGGATTTCTACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS-3UTR CAA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCATGATAAAGGTTGACTaGGGGCAGCAGCAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGMIKVD*GQQQRP
Trigger: AGGCCGCTGCTGCTGCCCCAAGTCAACCTTTATCAT...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CCA 90 bp GTGGCCGACTTGCATGAGAACTGGAACCCTGGCTCCAATGAGATCTaGAGTGTCCAAGGGTTGAACGAGACCGATAGCTTTCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: VADLHENWNPGSNEI*SVQGLNETDSFLQL
Trigger: CAGTTGGAGAAAGCTATCGGTCTCGTTCAACCCTTGGACACTCCAGATCTCATTGGAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CCA 90 bp GGGCTGTATAACAGTAGAAATCCTACTGCGGTTCCGTGGCTCCTGTaGCCGACTTGCATGAGAACTGGAACCCTGGCTCCAATGAGATCT +
Preference number: 5 (lower is better)
Translates to: GLYNSRNPTAVPWLL*PTCMRTGTLAPMRS
Trigger: AGATCTCATTGGAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGGATTTCTACTGTTATACAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACGGGCAGGCAGAAGCTaGATGATGAAGTGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGRAGRS*MMKWPC
Trigger: ACAAGGCCACTTCATCATCAAGCTTCTGCCTGCCCG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGCCTTCATCACTCCATaGTCAAATCGCACTCCCACG +
Preference number: 5 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGAFITP*SNRTPT
Trigger: CGTGGGAGTGCGATTTGACAATGGAGTGATGAAGGC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACCTGATGGCCAAAGATaGCAGCTCGGGAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGPDGQR*QLGRKK
Trigger: TTTCTTCCTCCCGAGCTGCAATCTTTGGCCATCAGG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGATGATGAAGTGGCCTaGTCAAAGAGGCATAAGGGG +
Preference number: 5 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGDDEVA*SKRHKG
Trigger: CCCCTTATGCCTCTTTGACAAGGCCACTTCATCATC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGCCCATGACCATAGTTaGGGTGCATCCTATGTGGAT +
Preference number: 5 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGAHDHS*GASYVD
Trigger: ATCCACATAGGATGCACCCAAACTATGGTCATGGGC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCTCATGCCATCTTTGGTaGACTGCAGTACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGSCHLW*TAVPGR
Trigger: CCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGA...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS TCA 90 bp AATTCCCAGTTCCCAGGCAGACCTCTCTGGAGCCTGTCGAGGATGTaGGGACATAGTCTGAGGCACATGAATATGATGCCCATGACCATA +
Preference number: 5 (lower is better)
Translates to: NSQFPGRPLWSLSRM*GHSLRHMNMMPMTI
Trigger: TATGGTCATGGGCATCATATTCATGTGCCTCAGACTATGTCCTCACATCCTCGACAGGCTCCAGAGAGGTCTGCCTGGGAACTGGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559077.1
ENST00000559209.5
ENST00000561186.5
CDS GCA 90 bp TGCAGCTCGGGAGGAAGAAACAGGGCAGCAGGGGTCAAATGCAGATaGTCCATGAAAACTGCCACTTCCATGACTTCTGATACCACTGTT +
Preference number: 5 (lower is better)
Translates to: CSSGGRNRAAGVKCR*SMKTATSMTSDTTV
Trigger: AACAGTGGTATCAGAAGTCATGGAAGTGGCAGTTTTCATGGAGCATCTGCATTTGACCCCTGCTGCCCTGTTTCTTCCTCCCGAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 90 bp ATAATGGGCCAAGTGAGGATGCAATGCACCAGGTGTATAAGTAGCTaGAGTCACTCCAGCTTCAATTCCCAGTTCCCAGGCAGACCTCTC +
Preference number: 5 (lower is better)
Translates to: IMGQVRMQCTRCISS*SHSSFNSQFPGRPL
Trigger: GAGAGGTCTGCCTGGGAACTGGGAATTGAAGCTGGAGTGACTGCAGCTACTTATACACCTGGTGCATTGCATCCTCACTTGGCCCATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559077.1
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGATGGAGTGTCCAAGGGTaGAACGAGACCGATAGCTTT +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGWSVQG*NETDSF
Trigger: AAAGCTATCGGTCTCGTTCAACCCTTGGACACTCCA...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACTTCTGATACCACTGTaGCTCAGGTCCACTGGCAAT +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGLLIPL*LRSTGN
Trigger: ATTGCCAGTGGACCTGAGCAACAGTGGTATCAGAAG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGCTGCGCAACCATGCTaGATCCATAGCCATCTATTG +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGAAQPC*IHSHLL
Trigger: CAATAGATGGCTATGGATCAAGCATGGTTGCGCAGC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGTTCATGTGCCCGCGTaGGATGCTGCATCATCCTCC +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFVHVPA*DAASSS
Trigger: GGAGGATGATGCAGCATCCAACGCGGGCACATGAAC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGATCATGCCATCTTTGGTaGACTGCAGTACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGSCHLW*TAVPGR
Trigger: CCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGA...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 90 bp AAAGATTGCAGCTCGGGAGGAAGAAACAGGGCAGCAGGGGTCAAATaGAGATGCTCCATGAAAACTGCCACTTCCATGACTTCTGATACC +
Preference number: 5 (lower is better)
Translates to: KDCSSGGRNRAAGVK*RCSMKTATSMTSDT
Trigger: GGTATCAGAAGTCATGGAAGTGGCAGTTTTCATGGAGCATCTGCATTTGACCCCTGCTGCCCTGTTTCTTCCTCCCGAGCTGCAATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 90 bp ATGAAGTCGAGGAGGTGCGTGATAATGGGCCAAGTGAGGATGCAATaGACCAGGTGTATAAGTAGCTGCAGTCACTCCAGCTTCAATTCC +
Preference number: 5 (lower is better)
Translates to: MKSRRCVIMGQVRMQ*TRCISSCSHSSFNS
Trigger: GGAATTGAAGCTGGAGTGACTGCAGCTACTTATACACCTGGTGCATTGCATCCTCACTTGGCCCATTATCACGCACCTCCTCGACTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559077.1
ENST00000559209.5
ENST00000560216.5
ENST00000560952.1
ENST00000561186.5
CDS CCA 90 bp CTATTGCTTGTAAGAGTAGCTGAAGTCTCTGACACTGTGGAAGGTTaGCTACTGGTGACAGCTGAAGCAGTATCAGAGGCCTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LLLVRVAEVSDTVEG*LLVTAEAVSEACSE
Trigger: CTCTGAGCAGGCCTCTGATACTGCTTCAGCTGTCACCAGTAGCCAACCTTCCACAGTGTCAGAGACTTCAGCTACTCTTACAAGCAATAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS-3UTR CAA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGCTGCTGAAAGCAACTaGTATGAGGATGTCCTAATG +
Preference number: 5 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGAAESN*YEDVLM
Trigger: CATTAGGACATCCTCATACAAGTTGCTTTCAGCAGC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAAATAACATAATCCACTaGAGGCGGAGGCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGNNIIH*RRRLSL
Trigger: CAGACTCAGCCTCCGCCTCAAGTGGATTATGTTATT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGATCTTCCCCATCTTGTTaGCAGTGCAGTTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGSSPSC*QCSFLC
Trigger: ACAGAGGAAACTGCACTGCAAACAAGATGGGGAAGA...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557998.5
ENST00000561186.5
CDS TCA 90 bp GGTCAAATGCAGATGCTCCATGAAAACTGCCACTTCCATGACTTCTaGTACCACTGTTGCTCAGGTCCACTGGCAATGCCTGCTGTTCAT +
Preference number: 5 (lower is better)
Translates to: GQMQMLHENCHFHDF*YHCCSGPLAMPAVH
Trigger: ATGAACAGCAGGCATTGCCAGTGGACCTGAGCAACAGTGGTATCAGAAGTCATGGAAGTGGCAGTTTTCATGGAGCATCTGCATTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CCA 90 bp GCTGGTACCAGAACTACTATTTGCTCCACAAGGTGCTTGTACTTGTaGAGGTCTTTCCACAGGGCAAGCAGGATCACTAAAGGAAGGAGA +
Preference number: 5 (lower is better)
Translates to: AGTRTTICSTRCLYL*RSFHRASRITKGRR
Trigger: TCTCCTTCCTTTAGTGATCCTGCTTGCCCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGTACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCTTCCTTCTCTTGCTTTaGAGAATCATCACACAGGTG +
Preference number: 5 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGFLLLL*RIITQV
Trigger: CACCTGTGTGATGATTCTCAAAAGCAAGAGAAGGAA...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGCTCCTGTGGCCGACTaGCATGAGAACTGGAACCCT +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVAPVAD*HENWNP
Trigger: AGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGCTCCTGTGGCCGACTaGCATGAGAACTGGAACCCT +
Preference number: 5 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGAPVAD*HENWNP
Trigger: AGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATAAGGTAACCTTGGCATaGCAGGAGGGCCAGTTTCCG +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHKVTLA*QEGQFP
Trigger: CGGAAACTGGCCCTCCTGCAATGCCAAGGTTACCTT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCGGGCAGGCAGAAGCTaGATGATGAAGTGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIRAGRS*MMKWPC
Trigger: ACAAGGCCACTTCATCATCAAGCTTCTGCCTGCCCG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGAAGATGCTGAGGGATaGGTGCAGCTGTACTGGCTA +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFEDAEG*VQLYWL
Trigger: TAGCCAGTACAGCTGCACCAATCCCTCAGCATCTTC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGTTCATGTGCCCGCGTaGGATGCTGCATCATCCTCC +
Preference number: 5 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGVHVPA*DAASSS
Trigger: GGAGGATGATGCAGCATCCAACGCGGGCACATGAAC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000557998.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGATGGGATGCTCCACGATaGACATTGCCTAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGWDAPR*TLPNLS
Trigger: AGAAAGATTAGGCAATGTCAATCGTGGAGCATCCCA...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCATGGGGCACTTCTTATaGGTAATCAACCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGMGHFL*VINHWS
Trigger: TGACCAATGGTTGATTACCAATAAGAAGTGCCCCAT...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGGTGTCAACTTTCACTaGGCAGCTGGGCCTCAATGT +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFGVNFH*AAGPQC
Trigger: ACATTGAGGCCCAGCTGCCAAGTGAAAGTTGACACC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS GCA 90 bp CTGTTCATGATAGCTGGTACCAGAACTACTATTTGCTCCACAAGGTaGTTGTACTTGTGGAGGTCTTTCCACAGGGCAAGCAGGATCACT +
Preference number: 5 (lower is better)
Translates to: LFMIAGTRTTICSTR*LYLWRSFHRASRIT
Trigger: AGTGATCCTGCTTGCCCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGTACCAGCTATCATGAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 90 bp ATAATGGGCCAAGTGAGGATGCAATGCACCAGGTGTATAAGTAGCTaGAGTCACTCCAGCTTCAATTCCCAGTTCCCTAACGAAAGGATG +
Preference number: 5 (lower is better)
Translates to: IMGQVRMQCTRCISS*SHSSFNSQFPNERM
Trigger: CATCCTTTCGTTAGGGAACTGGGAATTGAAGCTGGAGTGACTGCAGCTACTTATACACCTGGTGCATTGCATCCTCACTTGGCCCATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560216.5
ENST00000560952.1
CDS CCA 90 bp TCATCACTTGGTGTCCCTAGGTGTTGCCTCAGTCCTAATATTCCCTaGTTTTCTTTAACACAATTCTGCACATACGAAGGGCCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SSLGVPRCCLSPNIP*FSLTQFCTYEGPAC
Trigger: GCAGGCTGGCCCTTCGTATGTGCAGAATTGTGTTAAAGAAAACCAGGGAATATTAGGACTGAGGCAACACCTAGGGACACCAAGTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559757.1
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCCTGCAGGAAAACTTTaGGCTGCCCCAATGGGCTCT +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVPAGKL*AAPMGS
Trigger: AGAGCCCATTGGGGCAGCCAAAAGTTTTCCTGCAGG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCTGGAGTGTCCAAGGGTaGAACGAGACCGATAGCTTT +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFWSVQG*NETDSF
Trigger: AAAGCTATCGGTCTCGTTCAACCCTTGGACACTCCA...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGACTTGTGATTCCATTCTaGCAGAAGTGGTTGGTACTA +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGLVIPF*QKWLVL
Trigger: TAGTACCAACCACTTCTGCAAGAATGGAATCACAAG...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCCTTCTGATACCACTGTaGCTCAGGTCCACTGGCAAT +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFLLIPL*LRSTGN
Trigger: ATTGCCAGTGGACCTGAGCAACAGTGGTATCAGAAG...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATGATAAAGGTTGACTaGGGGCAGCAGCAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVMIKVD*GQQQRP
Trigger: AGGCCGCTGCTGCTGCCCCAAGTCAACCTTTATCAT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGATGATGAAGTGGCCTaGTCAAAGAGGCATAAGGGG +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFDDEVA*SKRHKG
Trigger: CCCCTTATGCCTCTTTGACAAGGCCACTTCATCATC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGAAGATGCTGAGGGATaGGTGCAGCTGTACTGGCTA +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIEDAEG*VQLYWL
Trigger: TAGCCAGTACAGCTGCACCAATCCCTCAGCATCTTC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAGCTCCACGATTGACATaGCCTAATCTTTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGAPRLT*PNLSSK
Trigger: TTTGGAAGAAAGATTAGGCAATGTCAATCGTGGAGC...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGGGGCACTTCTTATaGGTAATCAACCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGMGHFL*VINHWS
Trigger: TGACCAATGGTTGATTACCAATAAGAAGTGCCCCAT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGGTGTCAACTTTCACTaGGCAGCTGGGCCTCAATGT +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHGVNFH*AAGPQC
Trigger: ACATTGAGGCCCAGCTGCCAAGTGAAAGTTGACACC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 90 bp TCCCGATACAGATTCTGTCTCAGTCCGAGGCCACTTATGAGACCGTaGACTATGGCTTCTACTTTTAGCATTCAAAATGGTCTGGGAATG +
Preference number: 5 (lower is better)
Translates to: SRYRFCLSPRPLMRP*TMASTFSIQNGLGM
Trigger: CATTCCCAGACCATTTTGAATGCTAAAAGTAGAAGCCATAGTGCACGGTCTCATAAGTGGCCTCGGACTGAGACAGAATCTGTATCGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGACTCTCCTGTGTCTTaGGTGCATCAGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFDSPVS*VHQKES
Trigger: AGATTCCTTCTGATGCACCAAAGACACAGGAGAGTC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCGAGGGAACAGCTGGATaGTTTTGGTGGTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFEGTAG*FWWFSL
Trigger: CAGTGAAAACCACCAAAACAATCCAGCTGTTCCCTC...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCGTAGATGGATTTGAATaGTTAATGGAAGCGCTAGTA +
Preference number: 5 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGVDGFE*LMEALV
Trigger: TACTAGCGCTTCCATTAACAATTCAAATCCATCTAC...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAAGGTAACCTTGGCATaGCAGGAGGGCCAGTTTCCG +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQKVTLA*QEGQFP
Trigger: CGGAAACTGGCCCTCCTGCAATGCCAAGGTTACCTT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTACAAGGTGCTTGTACTaGTGGAGGTCTTTCCACAGG +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCITRCLY*WRSFHR
Trigger: CCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTGCTCCACAAGGTGCTaGTACTTGTGGAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHCSTRC*YLWRSF
Trigger: GAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTCTTCTGATACCACTGTaGCTCAGGTCCACTGGCAAT +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCILLIPL*LRSTGN
Trigger: ATTGCCAGTGGACCTGAGCAACAGTGGTATCAGAAG...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCCTGATGGCCAAAGATaGCAGCTCGGGAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVPDGQR*QLGRKK
Trigger: TTTCTTCCTCCCGAGCTGCAATCTTTGGCCATCAGG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATGAGAGGGAGGGCATCCATAGCCATCTATaGATGATAAAGGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: MPSLVDCSTRKDGNEREGIHSHL*MIKVDL
Trigger: CAAGTCAACCTTTATCATCAATAGATGGCTATGGAT...GCCCTCCCTCTCATTCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGCTGCGCAACCATGCTaGATCCATAGCCATCTATTG +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHAAQPC*IHSHLL
Trigger: CAATAGATGGCTATGGATCAAGCATGGTTGCGCAGC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGCTGCGCAACCATGCTaGATCCATAGCCATCTATTG +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIAAQPC*IHSHLL
Trigger: CAATAGATGGCTATGGATCAAGCATGGTTGCGCAGC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCGGGCAGGCAGAAGCTaGATGATGAAGTGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQRAGRS*MMKWPC
Trigger: ACAAGGCCACTTCATCATCAAGCTTCTGCCTGCCCG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGAAGATGCTGAGGGATaGGTGCAGCTGTACTGGCTA +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVEDAEG*VQLYWL
Trigger: TAGCCAGTACAGCTGCACCAATCCCTCAGCATCTTC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGAAGATGCTGAGGGATaGGTGCAGCTGTACTGGCTA +
Preference number: 5 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGEDAEG*VQLYWL
Trigger: TAGCCAGTACAGCTGCACCAATCCCTCAGCATCTTC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGCCCATGACCATAGTTaGGGTGCATCCTATGTGGAT +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHAHDHS*GASYVD
Trigger: ATCCACATAGGATGCACCCAAACTATGGTCATGGGC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTCATGCCATCTTTGGTaGACTGCAGTACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHSCHLW*TAVPGR
Trigger: CCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CCA 90 bp GGGCACTTCTTATTGGTAATCAACCATTGGTCAACACACACTTGGTaGAAAAGGTGCATACATGGAAGACGTCTCACATCTTCACCTTCC +
Preference number: 5 (lower is better)
Translates to: GHFLLVINHWSTHTW*KRCIHGRRLTSSPS
Trigger: GGAAGGTGAAGATGTGAGACGTCTTCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAATGGTTGATTACCAATAAGAAGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000560952.1
ENST00000561186.5
CDS CCA 90 bp GGGCACTTCTTATTGGTAATCAACCATTGGTCAACACACACTTGGTaGAAAAGGTGCATACATGGAAGACGTGCCTGTAATCCCAGCATT +
Preference number: 5 (lower is better)
Translates to: GHFLLVINHWSTHTW*KRCIHGRRACNPSI
Trigger: AATGCTGGGATTACAGGCACGTCTTCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAATGGTTGATTACCAATAAGAAGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560080.1
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGACTCTCCTGTGTCTTaGGTGCATCAGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIDSPVS*VHQKES
Trigger: AGATTCCTTCTGATGCACCAAAGACACAGGAGAGTC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCATTATCTTCATCACTaGGTGTCCCTAGGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHHYLHH*VSLGVA
Trigger: GGCAACACCTAGGGACACCAAGTGATGAAGATAATG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTGGAGTGTCCAAGGGTaGAACGAGACCGATAGCTTT +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVWSVQG*NETDSF
Trigger: AAAGCTATCGGTCTCGTTCAACCCTTGGACACTCCA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGCTCCTGTGGCCGACTaGCATGAGAACTGGAACCCT +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVAPVAD*HENWNP
Trigger: AGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTGCTCCACAAGGTGCTaGTACTTGTGGAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVCSTRC*YLWRSF
Trigger: GAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGCGCAGGTAAGTCATGCCATCTTTGGTTGACTGCAGTACCAGGAAGGATGGGAATCCATAGCCATCTATaGATGATAAAGGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: CAGKSCHLWLTAVPGRMGIHSHL*MIKVDL
Trigger: CAAGTCAACCTTTATCATCAATAGATGGCTATGGAT...TCCCATCCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGACTTACCTGCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGATGATGAAGTGGCCTaGTCAAAGAGGCATAAGGGG +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVDDEVA*SKRHKG
Trigger: CCCCTTATGCCTCTTTGACAAGGCCACTTCATCATC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTAATAACATAATCCACTaGAGGCGGAGGCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCINNIIH*RRRLSL
Trigger: CAGACTCAGCCTCCGCCTCAAGTGGATTATGTTATT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGCCCATGACCATAGTTaGGGTGCATCCTATGTGGAT +
Preference number: 5 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGAHDHS*GASYVD
Trigger: ATCCACATAGGATGCACCCAAACTATGGTCATGGGC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTATGTACATCTTTCAATaGTCCCCTGGGATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIMYIFQ*SPGMLH
Trigger: GTGGAGCATCCCAGGGGACAATTGAAAGATGTACAT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCTTGGTCAACACACACTaGGTGGAAAAGGTGCATACA +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFLVNTH*VEKVHT
Trigger: TGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAA...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGGTGTCAACTTTCACTaGGCAGCTGGGCCTCAATGT +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQGVNFH*AAGPQC
Trigger: ACATTGAGGCCCAGCTGCCAAGTGAAAGTTGACACC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATCATGCCATCTTTGGTaGACTGCAGTACCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGSCHLW*TAVPGR
Trigger: CCTTCCTGGTACTGCAGTCAACCAAAGATGGCATGA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATCTAAAGCAGCTAACCTaGCCTGCAAGTTTAGGGTCA +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHLKQLT*PASLGS
Trigger: TGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAG...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTAGGAAGACAGGCTACTaGCTCTTTTCCCCAGTAAGA +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIRKTGY*LFSPVR
Trigger: TCTTACTGGGGAAAAGAGCAAGTAGCCTGTCTTCCT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCCACCTGTGCTTTACTaGTATCTGGGGGAACGTCAA +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVPPVLY*YLGERQ
Trigger: TTGACGTTCCCCCAGATACAAGTAAAGCACAGGTGG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATACACAAAAAGACCAGTaGGATGCTGCATCATCCTCC +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHTQKDQ*DAASSS
Trigger: GGAGGATGATGCAGCATCCAACTGGTCTTTTTGTGT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATTCTTCCCCATCTTGTTaGCAGTGCAGTTTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHSSPSC*QCSFLC
Trigger: ACAGAGGAAACTGCACTGCAAACAAGATGGGGAAGA...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557998.5
ENST00000561186.5
CDS CCA 90 bp ATGTCCACTCTGCATATGGGGCACTTCTTATTGGTAATCAACCATTaGTCAACACACACTTGGTGGAAAAGGTGCATACATGGAAGACGT +
Preference number: 5 (lower is better)
Translates to: MSTLHMGHFLLVINH*STHTWWKRCIHGRR
Trigger: ACGTCTTCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAATGGTTGATTACCAATAAGAAGTGCCCCATATGCAGAGTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000560080.1
ENST00000560952.1
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGCATTATCTTCATCACTaGGTGTCCCTAGGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVHYLHH*VSLGVA
Trigger: GGCAACACCTAGGGACACCAAGTGATGAAGATAATG...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATAACAGCTGGATTGTTTaGGTGGTTTTCACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHNSWIV*VVFTGR
Trigger: TCTGCCAGTGAAAACCACCAAAACAATCCAGCTGTT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTAACAGCTGGATTGTTTaGGTGGTTTTCACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCINSWIV*VVFTGR
Trigger: TCTGCCAGTGAAAACCACCAAAACAATCCAGCTGTT...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGAGGGAACAGCTGGATaGTTTTGGTGGTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVEGTAG*FWWFSL
Trigger: CAGTGAAAACCACCAAAACAATCCAGCTGTTCCCTC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCACATTAATTTCTTCATaGGCAGTAACCTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFTLISS*AVTWGV
Trigger: CACTCCCCAGGTTACTGCCAATGAAGAAATTAATGT...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGAGTGTCCAAGGGTaGAACGAGACCGATAGCTTT +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQWSVQG*NETDSF
Trigger: AAAGCTATCGGTCTCGTTCAACCCTTGGACACTCCA...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGTGCCAGTGGTACTATaGCTTGTAAGAGTAGCTGAA +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIVPVVL*LVRVAE
Trigger: TTCAGCTACTCTTACAAGCAATAGTACCACTGGCAC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAAGGTAACCTTGGCATaGCAGGAGGGCCAGTTTCCG +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVKVTLA*QEGQFP
Trigger: CGGAAACTGGCCCTCCTGCAATGCCAAGGTTACCTT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTGCTGCTGAAAGCAACTaGTATGAGGATGTCCTAATG +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIAAESN*YEDVLM
Trigger: CATTAGGACATCCTCATACAAGTTGCTTTCAGCAGC...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGCTGCTGAAAGCAACTaGTATGAGGATGTCCTAATG +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHAAESN*YEDVLM
Trigger: CATTAGGACATCCTCATACAAGTTGCTTTCAGCAGC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGACAAGGTGCTTGTACTaGTGGAGGTCTTTCCACAGG +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQTRCLY*WRSFHR
Trigger: CCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTATGATAAAGGTTGACTaGGGGCAGCAGCAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIMIKVD*GQQQRP
Trigger: AGGCCGCTGCTGCTGCCCCAAGTCAACCTTTATCAT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAATGATAAAGGTTGACTaGGGGCAGCAGCAGCGGCCT +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVMIKVD*GQQQRP
Trigger: AGGCCGCTGCTGCTGCCCCAAGTCAACCTTTATCAT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGCTGCGCAACCATGCTaGATCCATAGCCATCTATTG +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQAAQPC*IHSHLL
Trigger: CAATAGATGGCTATGGATCAAGCATGGTTGCGCAGC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACGGGCAGGCAGAAGCTaGATGATGAAGTGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVRAGRS*MMKWPC
Trigger: ACAAGGCCACTTCATCATCAAGCTTCTGCCTGCCCG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGAATAACATAATCCACTaGAGGCGGAGGCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVNNIIH*RRRLSL
Trigger: CAGACTCAGCCTCCGCCTCAAGTGGATTATGTTATT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTGGGATGCTCCACGATaGACATTGCCTAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIWDAPR*TLPNLS
Trigger: AGAAAGATTAGGCAATGTCAATCGTGGAGCATCCCA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTTGGTCAACACACACTaGGTGGAAAAGGTGCATACA +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCILVNTH*VEKVHT
Trigger: TGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TGTGCTTTACTTGTATCTGGGGGAACGTCAAGAGGACTCCATGACATACAGTTCATTGGTAATCAACCATaGGTCAACACACACTTGGTG +
Preference number: 5 (lower is better)
Translates to: CALLVSGGTSRGLHDIQFIGNQP*VNTHLV
Trigger: CACCAAGTGTGTGTTGACCAATGGTTGATTACCAAT...GAACTGTATGTCATGGAGTCCTCTTGACGTTCCCCCAGATACAAGTAAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCCACCTGTGCTTTACTaGTATCTGGGGGAACGTCAA +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQPPVLY*YLGERQ
Trigger: TTGACGTTCCCCCAGATACAAGTAAAGCACAGGTGG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS TCA 90 bp ATTAACAATCCCGATACAGATTCTGTCTCAGTCCGAGGCCACTTATaGGACCGTGCACTATGGCTTCTACTTTTAGCATTCAAAATGGTC +
Preference number: 5 (lower is better)
Translates to: INNPDTDSVSVRGHL*DRALWLLLLAFKMV
Trigger: GACCATTTTGAATGCTAAAAGTAGAAGCCATAGTGCACGGTCTCATAAGTGGCCTCGGACTGAGACAGAATCTGTATCGGGATTGTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 90 bp TACTACAGTAGGTTCATCTTCATCAACGGTAAGGTCCACAACTTCTaGTGCATTCTGCCTCAAGGGCTGTATAACAGTAGAAATCCTACT +
Preference number: 5 (lower is better)
Translates to: YYSRFIFINGKVHNF*CILPQGLYNSRNPT
Trigger: AGTAGGATTTCTACTGTTATACAGCCCTTGAGGCAGAATGCAGCAGAAGTTGTGGACCTTACCGTTGATGAAGATGAACCTACTGTAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGGAGGGAACAGCTGGATaGTTTTGGTGGTTTTCACTG +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQEGTAG*FWWFSL
Trigger: CAGTGAAAACCACCAAAACAATCCAGCTGTTCCCTC...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGTGCCAGTGGTACTATaGCTTGTAAGAGTAGCTGAA +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVVPVVL*LVRVAE
Trigger: TTCAGCTACTCTTACAAGCAATAGTACCACTGGCAC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTACCAGAACTACTATTaGCTCCACAAGGTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCIYQNYY*LHKVLV
Trigger: TACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGTA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACCTGATGGCCAAAGATaGCAGCTCGGGAGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVPDGQR*QLGRKK
Trigger: TTTCTTCCTCCCGAGCTGCAATCTTTGGCCATCAGG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGCTCCACGATTGACATaGCCTAATCTTTCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHAPRLT*PNLSSK
Trigger: TTTGGAAGAAAGATTAGGCAATGTCAATCGTGGAGC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTGGGATGCTCCACGATaGACATTGCCTAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVWDAPR*TLPNLS
Trigger: AGAAAGATTAGGCAATGTCAATCGTGGAGCATCCCA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGGGATGCTCCACGATaGACATTGCCTAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGWDAPR*TLPNLS
Trigger: AGAAAGATTAGGCAATGTCAATCGTGGAGCATCCCA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGATGTACATCTTTCAATaGTCCCCTGGGATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQMYIFQ*SPGMLH
Trigger: GTGGAGCATCCCAGGGGACAATTGAAAGATGTACAT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATCTTCCCCATCTTGTTaGCAGTGCAGTTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGSSPSC*QCSFLF
Trigger: AAAGAGGAAACTGCACTGCAAACAAGATGGGGAAGA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTCTTCCCCATCTTGTTaGCAGTGCAGTTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVSSPSC*QCSFLF
Trigger: AAAGAGGAAACTGCACTGCAAACAAGATGGGGAAGA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATATTGGTAATCAACCATaGGTCAACACACACTTGGTG +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHIGNQP*VNTHLV
Trigger: CACCAAGTGTGTGTTGACCAATGGTTGATTACCAAT...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGCTAAAGCAGCTAACCTaGCCTGCAAGTTTAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQLKQLT*PASLGS
Trigger: TGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAG...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGAGGAAGACAGGCTACTaGCTCTTTTCCCCAGTAAGA +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQRKTGY*LFSPVR
Trigger: TCTTACTGGGGAAAAGAGCAAGTAGCCTGTCTTCCT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATTCAGAATGCCTAATTaGGTCCCACAAGAACTCCTT +
Preference number: 5 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGFRMPN*VPQELL
Trigger: AAGGAGTTCTTGTGGGACCAAATTAGGCATTCTGAA...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348370.9
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTTCCTTCTCTTGCTTTaGAGAATCATCACACAGGTG +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVFLLLL*RIITQV
Trigger: CACCTGTGTGATGATTCTCAAAAGCAAGAGAAGGAA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGACATTAATTTCTTCATaGGCAGTAACCTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVTLISS*AVTWGV
Trigger: CACTCCCCAGGTTACTGCCAATGAAGAAATTAATGT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTACAAGGTGCTTGTACTaGTGGAGGTCTTTCCACAGG +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHITRCLY*WRSFHR
Trigger: CCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATGCTCCACAAGGTGCTaGTACTTGTGGAGGTCTTTC +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVCSTRC*YLWRSF
Trigger: GAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGTACCAGAACTACTATTaGCTCCACAAGGTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVYQNYY*LHKVLV
Trigger: TACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGTA...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACTTCTGATACCACTGTaGCTCAGGTCCACTGGCAAT +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVLLIPL*LRSTGN
Trigger: ATTGCCAGTGGACCTGAGCAACAGTGGTATCAGAAG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGATGATGAAGTGGCCTaGTCAAAGAGGCATAAGGGG +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIDDEVA*SKRHKG
Trigger: CCCCTTATGCCTCTTTGACAAGGCCACTTCATCATC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGCCCATGACCATAGTTaGGGTGCATCCTATGTGGAT +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIAHDHS*GASYVD
Trigger: ATCCACATAGGATGCACCCAAACTATGGTCATGGGC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATCAGTGATCGACTCTaGGTAATGTATGAAGTGGGA +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVISDRL*VMYEVG
Trigger: TCCCACTTCATACATTACCAAGAGTCGATCACTGAT...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp CCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGATGCATTTGCACACATACTATGTaGAAGCCTGTTAACATTGAC +
Preference number: 5 (lower is better)
Translates to: PWEHVLHIQTVILLTGCICTHTM*KPVNID
Trigger: GTCAATGTTAACAGGCTTCAACATAGTATGTGTGCA...AATGCATCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGACTCTCCTGTGTCTTaGGTGCATCAGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIDSPVS*VHQKES
Trigger: AGATTCCTTCTGATGCACCAAAGACACAGGAGAGTC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACATTATCTTCATCACTaGGTGTCCCTAGGTGTTGCC +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVHYLHH*VSLGVA
Trigger: GGCAACACCTAGGGACACCAAGTGATGAAGATAATG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTCTACTTACTAAAGCAGCTAACCTTGCCTGCAAGTTTAGGGTCACAAGCCCATGTAGATGGATTTGAATaGTTAATGGAAGCGCTAGTA +
Preference number: 5 (lower is better)
Translates to: FYLLKQLTLPASLGSQAHVDGFE*LMEALV
Trigger: TACTAGCGCTTCCATTAACAATTCAAATCCATCTAC...ATGGGCTTGTGACCCTAAACTTGCAGGCAAGGTTAGCTGCTTTAGTAAGTAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAATAACATAATCCACTaGAGGCGGAGGCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVNNIIH*RRRLSL
Trigger: CAGACTCAGCCTCCGCCTCAAGTGGATTATGTTATT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTATGTACATCTTTCAATaGTCCCCTGGGATGCTCCAC +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIMYIFQ*SPGMLH
Trigger: GTGGAGCATCCCAGGGGACAATTGAAAGATGTACAT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGATGGGGCACTTCTTATaGGTAATCAACCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: LLTSSHMIHGNMSSTYRQMGHFL*VINHWS
Trigger: TGACCAATGGTTGATTACCAATAAGAAGTGCCCCAT...CTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTACACAAAAAGACCAGTaGGATGCTGCATCATCCTCC +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHITQKDQ*DAASSS
Trigger: GGAGGATGATGCAGCATCCAACTGGTCTTTTTGTGT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559209.5
ENST00000561186.5
CDS TCA 90 bp GTGGATATGTACATCTTTCAATTGTCCCCTGGGATGCTCCACGATTaGCATTGCCTAATCTTTCTTCCAAATGAATCAGTTCCTCAAAAT +
Preference number: 5 (lower is better)
Translates to: VDMYIFQLSPGMLHD*HCLIFLPNESVPQN
Trigger: ATTTTGAGGAACTGATTCATTTGGAAGAAAGATTAGGCAATGTCAATCGTGGAGCATCCCAGGGGACAATTGAAAGATGTACATATCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000560216.5
ENST00000560952.1
ENST00000561186.5
CDS CCA 90 bp CTTTTAAGGTGTAGAGCTCGTTATATTCAGGAGTCCATTGAGACATaGGAAACTTTAAGGAAAGCCTTAAAACTGCTAATCCAGAACTGC +
Preference number: 5 (lower is better)
Translates to: LLRCRARYIQESIET*ETLRKALKLLIQNC
Trigger: GCAGTTCTGGATTAGCAGTTTTAAGGCTTTCCTTAAAGTTTCCCATGTCTCAATGGACTCCTGAATATAACGAGCTCTACACCTTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559160.1
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAAACAGCTGGATTGTTTaGGTGGTTTTCACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVNSWIV*VVFTGR
Trigger: TCTGCCAGTGAAAACCACCAAAACAATCCAGCTGTT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TATGATCCATGGGAACATGTCCTCCACATACAGACAGTGATATTACTGACTGGAGTAGATGGATTTGAATaGTTAATGGAAGCGCTAGTA +
Preference number: 5 (lower is better)
Translates to: YDPWEHVLHIQTVILLTGVDGFE*LMEALV
Trigger: TACTAGCGCTTCCATTAACAATTCAAATCCATCTAC...TCCAGTCAGTAATATCACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ATTGACATCTTCACATATGATCCATGGGAACATGTCCTCCACATACAGACAGTGGTAGATGGATTTGAATaGTTAATGGAAGCGCTAGTA +
Preference number: 5 (lower is better)
Translates to: IDIFTYDPWEHVLHIQTVVDGFE*LMEALV
Trigger: TACTAGCGCTTCCATTAACAATTCAAATCCATCTAC...CACTGTCTGTATGTGGAGGACATGTTCCCATGGATCATATGTGAAGATGTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAGTGCCAGTGGTACTATaGCTTGTAAGAGTAGCTGAA +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVVPVVL*LVRVAE
Trigger: TTCAGCTACTCTTACAAGCAATAGTACCACTGGCAC...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGTGCCAGTGGTACTATaGCTTGTAAGAGTAGCTGAA +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIVPVVL*LVRVAE
Trigger: TTCAGCTACTCTTACAAGCAATAGTACCACTGGCAC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTGCTGCTGAAAGCAACTaGTATGAGGATGTCCTAATG +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIAAESN*YEDVLM
Trigger: CATTAGGACATCCTCATACAAGTTGCTTTCAGCAGC...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATTGGTCAACACACACTaGGTGGAAAAGGTGCATACA +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVLVNTH*VEKVHT
Trigger: TGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTTTGGTCAACACACACTaGGTGGAAAAGGTGCATACA +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHILVNTH*VEKVHT
Trigger: TGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAA...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTTTCCTTCTCTTGCTTTaGAGAATCATCACACAGGTG +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIFLLLL*RIITQV
Trigger: CACCTGTGTGATGATTCTCAAAAGCAAGAGAAGGAA...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAACATTAATTTCTTCATaGGCAGTAACCTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVTLISS*AVTWGV
Trigger: CACTCCCCAGGTTACTGCCAATGAAGAAATTAATGT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTACTTGTGATTCCATTCTaGCAGAAGTGGTTGGTACTA +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVLVIPF*QKWLVL
Trigger: TAGTACCAACCACTTCTGCAAGAATGGAATCACAAG...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTCTTGTGATTCCATTCTaGCAGAAGTGGTTGGTACTA +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHILVIPF*QKWLVL
Trigger: TAGTACCAACCACTTCTGCAAGAATGGAATCACAAG...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATACCAGAACTACTATTaGCTCCACAAGGTGCTTGTA +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVYQNYY*LHKVLV
Trigger: TACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGTA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTATTGGTAATCAACCATaGGTCAACACACACTTGGTG +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIIGNQP*VNTHLV
Trigger: CACCAAGTGTGTGTTGACCAATGGTTGATTACCAAT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTATGGGGCACTTCTTATaGGTAATCAACCATTGGTCA +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIMGHFL*VINHWS
Trigger: TGACCAATGGTTGATTACCAATAAGAAGTGCCCCAT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTAATCAGTGATCGACTCTaGGTAATGTATGAAGTGGGA +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVISDRL*VMYEVG
Trigger: TCCCACTTCATACATTACCAAGAGTCGATCACTGAT...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTATCAGTGATCGACTCTaGGTAATGTATGAAGTGGGA +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIISDRL*VMYEVG
Trigger: TCCCACTTCATACATTACCAAGAGTCGATCACTGAT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS-3UTR CAA 90 bp TTGGTAATGTATGAAGTGGGAGTATATAACCATAGCAACAGTAGGTTGACAGTATGCACACATACTATGTaGAAGCCTGTTAACATTGAC +
Preference number: 5 (lower is better)
Translates to: LVMYEVGVYNHSNSRLTVCTHTM*KPVNID
Trigger: GTCAATGTTAACAGGCTTCAACATAGTATGTGTGCA...TACTGTCAACCTACTGTTGCTATGGTTATATACTCCCACTTCATACATTACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5
CDS-3UTR CAA 90 bp ACAGTGATATTACTGACTGGATGCATTTGCAATCTGGGGCATATTAAGCATATTATCCATAGCCATCTATaGATGATAAAGGTTGACTTG +
Preference number: 5 (lower is better)
Translates to: TVILLTGCICNLGHIKHIIHSHL*MIKVDL
Trigger: CAAGTCAACCTTTATCATCAATAGATGGCTATGGAT...AATATGCTTAATATGCCCCAGATTGCAAATGCATCCAGTCAGTAATATCACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 72 bp AGAACTCCTTCTCTGAAGCTGCGGGCGTTTCTACGCTaGGCAAACCGAACACCTCCTCGCCGTCGCCGCCAC +
Preference number: 6 (lower is better)
Translates to: RTPSLKLRAFLR*ANRTPPRRRRH
Trigger: GTGGCGGCGACGGCGAGGAGGTGTTCGGTTTGCGCAGCGTAGAAACGCCCGCAGCTTCAGAGAAGGAGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559160.1
CDS TCA 72 bp ATCGCACTCCCACGCCTCGGTCCTCAGCCCCCATCCTaGGACTCTAGGGAGAGTCGGAAGTGGGAGAGAAAT +
Preference number: 6 (lower is better)
Translates to: IALPRLGPQPPS*DSRESRKWERN
Trigger: ATTTCTCTCCCACTTCCGACTCTCCCTAGAGTCTCAGGATGGGGGCTGAGGACCGAGGCGTGGGAGTGCGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS CAA 90 bp ATAAAGGTTGACTTGGGGCAGCAGCAGCGGCCTGATGGCCAAAGATaGCAGCTCGGGAGGAAGAAACAGGGCAGCAGGGGTCAAATGCAG +
Preference number: 6 (lower is better)
Translates to: IKVDLGQQQRPDGQR*QLGRKKQGSRGQMQ
Trigger: CTGCATTTGACCCCTGCTGCCCTGTTTCTTCCTCCCGAGCTGCAATCTTTGGCCATCAGGCCGCTGCTGCTGCCCCAAGTCAACCTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 72 bp TCGGTAGACGAATGCCTTGCCCAAACACAAATCGTCTaGGGAGACCCAGACCCTAAGTCACCACCGAGCCAG +
Preference number: 6 (lower is better)
Translates to: SVDECLAQTQIV*GDPDPKSPPSQ
Trigger: CTGGCTCGGTGGTGACTTAGGGTCTGGGTCTCCGCAGACGATTTGTGTTTGGGCAAGGCATTCGTCTACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS GCA 72 bp ACTGTAGGCTGTGGGTGTGTCGGTAGACGAATGCCTTaGCCAAACACAAATCGTCTGCGGAGACCCAGACCC +
Preference number: 6 (lower is better)
Translates to: TVGCGCVGRRMP*PNTNRLRRPRP
Trigger: GGGTCTGGGTCTCCGCAGACGATTTGTGTTTGGGCAAGGCATTCGTCTACCGACACACCCACAGCCTACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS CCA 72 bp GGTTCCGTGGCTCCTGTGGCCGACTTGCATGAGAACTaGAACCCTGGCTCCAATGAGATCTGGAGTGTCCAA +
Preference number: 6 (lower is better)
Translates to: GSVAPVADLHEN*NPGSNEIWSVQ
Trigger: TTGGACACTCCAGATCTCATTGGAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CCA 72 bp ATGACCATAGTTTGGGTGCATCCTATGTGGATGGGGTaGGGGGCGTTCATGTGCCCGCGTTGGATGCTGCAT +
Preference number: 6 (lower is better)
Translates to: MTIVWVHPMWMG*GAFMCPRWMLH
Trigger: ATGCAGCATCCAACGCGGGCACATGAACGCCCCCCACCCCATCCACATAGGATGCACCCAAACTATGGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000558977.1
CDS GCA 72 bp AATCCTACTGCGGTTCCGTGGCTCCTGTGGCCGACTTaGATGAGAACTGGAACCCTGGCTCCAATGAGATCT +
Preference number: 6 (lower is better)
Translates to: NPTAVPWLLWPT*MRTGTLAPMRS
Trigger: AGATCTCATTGGAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CCA 72 bp AACAGTAGAAATCCTACTGCGGTTCCGTGGCTCCTGTaGCCGACTTGCATGAGAACTGGAACCCTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: NSRNPTAVPWLL*PTCMRTGTLAP
Trigger: TGGAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGGATTTCTACTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CCA 72 bp ATGACCATAGTTTGGGTGCATCCTATGTGGATGGGGTaGGGGGCGTTCATGTGCCCGCCTGGAAACACAGAA +
Preference number: 6 (lower is better)
Translates to: MTIVWVHPMWMG*GAFMCPPGNTE
Trigger: TTCTGTGTTTCCAGGCGGGCACATGAACGCCCCCCACCCCATCCACATAGGATGCACCCAAACTATGGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559077.1
ENST00000559209.5
ENST00000561186.5
CDS CAA 72 bp AAATCCTACTGCGGTTCCGTGGCTCCTGTGGCCGACTaGCATGAGAACTGGAACCCTGGCTCCAATGAGATC +
Preference number: 6 (lower is better)
Translates to: KSYCGSVAPVAD*HENWNPGSNEI
Trigger: GATCTCATTGGAGCCAGGGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CAA 90 bp GGGGCGTTCATGTGCCCGCGTTGGATGCTGCATCATCCTCCTCCTTaGAACTTCCATCCTCTGCATCACTTCATGAGGATGCAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: GAFMCPRWMLHHPPP*NFHPLHHFMRMQSL
Trigger: CAGAGACTGCATCCTCATGAAGTGATGCAGAGGATGGAAGTTCAAAGGAGGAGGATGATGCAGCATCCAACGCGGGCACATGAACGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000558977.1
CDS TCA 72 bp CTGAAGTCTCTGACACTGTGGAAGGTTGGCTACTGGTaGCAGCTGAAGCAGTATCAGAGGCCTGCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: LKSLTLWKVGYW*QLKQYQRPAQR
Trigger: CCTCTGAGCAGGCCTCTGATACTGCTTCAGCTGTCACCAGTAGCCAACCTTCCACAGTGTCAGAGACTTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CCA 72 bp GGGCTGTATAACAGTAGAAATCCTACTGCGGTTCCGTaGCTCCTGTGGCCGACTTGCATGAGAACTGGAACC +
Preference number: 6 (lower is better)
Translates to: GLYNSRNPTAVP*LLWPTCMRTGT
Trigger: GGTTCCAGTTCTCATGCAAGTCGGCCACAGGAGCCACGGAACCGCAGTAGGATTTCTACTGTTATACAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CCA 72 bp TGCTGGAGGTGCTGTGGCTGGAATATGGTGCGAAATTaGCTGGTGTGTAGGAGGAAGATGCTGAGGGATTGG +
Preference number: 6 (lower is better)
Translates to: CWRCCGWNMVRN*LVCRRKMLRDW
Trigger: CCAATCCCTCAGCATCTTCCTCCTACACACCAGCCAATTTCGCACCATATTCCAGCCACAGCACCTCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000558977.1
ENST00000559209.5
ENST00000561186.5
CDS CCA 72 bp ATGAGGATGCAGTCTCTGTGCTGGAGGTGCTGTGGCTaGAATATGGTGCGAAATTGGCTGGTGTGTAGGAGG +
Preference number: 6 (lower is better)
Translates to: MRMQSLCWRCCG*NMVRNWLVCRR
Trigger: CCTCCTACACACCAGCCAATTTCGCACCATATTCCAGCCACAGCACCTCCAGCACAGAGACTGCATCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000558977.1
ENST00000559209.5
ENST00000561186.5
CDS CAA 72 bp GGGGCTGCGCAACCATGCTTGATCCATAGCCATCTATaGATGATAAAGGTTGACTTGGGGCAGCAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: GAAQPCLIHSHL*MIKVDLGQQQR
Trigger: CCGCTGCTGCTGCCCCAAGTCAACCTTTATCATCAATAGATGGCTATGGATCAAGCATGGTTGCGCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 72 bp AGCTCGGGAGGAAGAAACAGGGCAGCAGGGGTCAAATaGAGATGCTCCATGAAAACTGCCACTTCCATGACT +
Preference number: 6 (lower is better)
Translates to: SSGGRNRAAGVK*RCSMKTATSMT
Trigger: AGTCATGGAAGTGGCAGTTTTCATGGAGCATCTGCATTTGACCCCTGCTGCCCTGTTTCTTCCTCCCGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 72 bp AGGAGGTGCGTGATAATGGGCCAAGTGAGGATGCAATaGACCAGGTGTATAAGTAGCTGCAGTCACTCCAGC +
Preference number: 6 (lower is better)
Translates to: RRCVIMGQVRMQ*TRCISSCSHSS
Trigger: GCTGGAGTGACTGCAGCTACTTATACACCTGGTGCATTGCATCCTCACTTGGCCCATTATCACGCACCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559077.1
ENST00000559209.5
ENST00000560216.5
ENST00000560952.1
ENST00000561186.5
CDS CAA 90 bp CAACCATGCTTGATCCATAGCCATCTATTGATGATAAAGGTTGACTaGGGGCAGCAGCAGCGGCCTGATGGCCAAAGATTGCAGCTCGGG +
Preference number: 6 (lower is better)
Translates to: QPCLIHSHLLMIKVD*GQQQRPDGQRLQLG
Trigger: CCCGAGCTGCAATCTTTGGCCATCAGGCCGCTGCTGCTGCCCCAAGTCAACCTTTATCATCAATAGATGGCTATGGATCAAGCATGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS TCA 72 bp AGAATGCCTAATTTGGTCCCACAAGAACTCCTTCTCTaGAGCTGCGGGCGTTTCTACGCTGCGCAAACCGAA +
Preference number: 6 (lower is better)
Translates to: RMPNLVPQELLL*SCGRFYAAQTE
Trigger: TTCGGTTTGCGCAGCGTAGAAACGCCCGCAGCTTCAGAGAAGGAGTTCTTGTGGGACCAAATTAGGCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559160.1
CDS CCA 72 bp GTAAGAGTAGCTGAAGTCTCTGACACTGTGGAAGGTTaGCTACTGGTGACAGCTGAAGCAGTATCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: VRVAEVSDTVEG*LLVTAEAVSEA
Trigger: GGCCTCTGATACTGCTTCAGCTGTCACCAGTAGCCAACCTTCCACAGTGTCAGAGACTTCAGCTACTCTTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CCA 72 bp ATGAGAATGCGGGCAGGCAGAAGCTTGATGATGAAGTaGCCTTGTCAAAGAGGCATAAGGGGGTGGCATGTA +
Preference number: 6 (lower is better)
Translates to: MRMRAGRSLMMK*PCQRGIRGWHV
Trigger: TACATGCCACCCCCTTATGCCTCTTTGACAAGGCCACTTCATCATCAAGCTTCTGCCTGCCCGCATTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CCA 72 bp GATGGGAATGAGAGGGAGGGCAAGAGTTCTGAAACATaGTGTCAACTTTCACTTGGCAGCTGGGCCTCAATG +
Preference number: 6 (lower is better)
Translates to: DGNEREGKSSET*CQLSLGSWASM
Trigger: CATTGAGGCCCAGCTGCCAAGTGAAAGTTGACACCATGTTTCAGAACTCTTGCCCTCCCTCTCATTCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000560080.1
ENST00000560952.1
ENST00000561186.5
CDS CAA 72 bp GCTGGTACCAGAACTACTATTTGCTCCACAAGGTGCTaGTACTTGTGGAGGTCTTTCCACAGGGCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: AGTRTTICSTRC*YLWRSFHRASR
Trigger: CCTGCTTGCCCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGTACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CAA 90 bp CTGGCAATGCCTGCTGTTCATGATAGCTGGTACCAGAACTACTATTaGCTCCACAAGGTGCTTGTACTTGTGGAGGTCTTTCCACAGGGC +
Preference number: 6 (lower is better)
Translates to: LAMPAVHDSWYQNYY*LHKVLVLVEVFPQG
Trigger: GCCCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGTACCAGCTATCATGAACAGCAGGCATTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS TCA 72 bp CAGATGCTCCATGAAAACTGCCACTTCCATGACTTCTaGTACCACTGTTGCTCAGGTCCACTGGCAATGCCT +
Preference number: 6 (lower is better)
Translates to: QMLHENCHFHDF*YHCCSGPLAMP
Trigger: AGGCATTGCCAGTGGACCTGAGCAACAGTGGTATCAGAAGTCATGGAAGTGGCAGTTTTCATGGAGCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 72 bp GGAGGAAGAAACAGGGCAGCAGGGGTCAAATGCAGATaGTCCATGAAAACTGCCACTTCCATGACTTCTGAT +
Preference number: 6 (lower is better)
Translates to: GGRNRAAGVKCR*SMKTATSMTSD
Trigger: ATCAGAAGTCATGGAAGTGGCAGTTTTCATGGAGCATCTGCATTTGACCCCTGCTGCCCTGTTTCTTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CCA 72 bp TTGCATGAGAACTGGAACCCTGGCTCCAATGAGATCTaGAGTGTCCAAGGGTTGAACGAGACCGATAGCTTT +
Preference number: 6 (lower is better)
Translates to: LHENWNPGSNEI*SVQGLNETDSF
Trigger: AAAGCTATCGGTCTCGTTCAACCCTTGGACACTCCAGATCTCATTGGAGCCAGGGTTCCAGTTCTCATGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CCA 72 bp TCCATGACTTCTGATACCACTGTTGCTCAGGTCCACTaGCAATGCCTGCTGTTCATGATAGCTGGTACCAGA +
Preference number: 6 (lower is better)
Translates to: SMTSDTTVAQVH*QCLLFMIAGTR
Trigger: TCTGGTACCAGCTATCATGAACAGCAGGCATTGCCAGTGGACCTGAGCAACAGTGGTATCAGAAGTCATGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CCA 72 bp TCAGGTCCACTGGCAATGCCTGCTGTTCATGATAGCTaGTACCAGAACTACTATTTGCTCCACAAGGTGCTT +
Preference number: 6 (lower is better)
Translates to: SGPLAMPAVHDS*YQNYYLLHKVL
Trigger: AAGCACCTTGTGGAGCAAATAGTAGTTCTGGTACCAGCTATCATGAACAGCAGGCATTGCCAGTGGACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CAA 72 bp ACCAGAACTACTATTTGCTCCACAAGGTGCTTGTACTaGTGGAGGTCTTTCCACAGGGCAAGCAGGATCACT +
Preference number: 6 (lower is better)
Translates to: TRTTICSTRCLY*WRSFHRASRIT
Trigger: AGTGATCCTGCTTGCCCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CAA 72 bp TTGATCCATAGCCATCTATTGATGATAAAGGTTGACTaGGGGCAGCAGCAGCGGCCTGATGGCCAAAGATTG +
Preference number: 6 (lower is better)
Translates to: LIHSHLLMIKVD*GQQQRPDGQRL
Trigger: CAATCTTTGGCCATCAGGCCGCTGCTGCTGCCCCAAGTCAACCTTTATCATCAATAGATGGCTATGGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CAA 90 bp ATAGCTGGTACCAGAACTACTATTTGCTCCACAAGGTGCTTGTACTaGTGGAGGTCTTTCCACAGGGCAAGCAGGATCACTAAAGGAAGG +
Preference number: 6 (lower is better)
Translates to: IAGTRTTICSTRCLY*WRSFHRASRITKGR
Trigger: CCTTCCTTTAGTGATCCTGCTTGCCCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGTACCAGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CAA 90 bp ACAGAACACAAAAAGACCAGTTGGATGCTGCATCATCCTCCTCCTTaGAACTTCCATCCTCTGCATCACTTCATGAGGATGCAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: TEHKKTSWMLHHPPP*NFHPLHHFMRMQSL
Trigger: CAGAGACTGCATCCTCATGAAGTGATGCAGAGGATGGAAGTTCAAAGGAGGAGGATGATGCAGCATCCAACTGGTCTTTTTGTGTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559209.5
ENST00000561186.5
CDS CAA 90 bp TGGGCTCTGGATGCAAAAGGATCCCTTTCAGACTCTCCTGTGTCTTaGGTGCATCAGAAGGAATCTCACTCTTCATATCCACTTTTAAGG +
Preference number: 6 (lower is better)
Translates to: WALDAKGSLSDSPVS*VHQKESHSSYPLLR
Trigger: CCTTAAAAGTGGATATGAAGAGTGAGATTCCTTCTGATGCACCAAAGACACAGGAGAGTCTGAAAGGGATCCTTTTGCATCCAGAGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559160.1
ENST00000559209.5
ENST00000559757.1
ENST00000561186.5
CDS CAA 90 bp GTAGTTCTCCTTGAGTCATCTCCTATAGAAGTGCCAGTGGTACTATaGCTTGTAAGAGTAGCTGAAGTCTCTGACACTGTGGAAGGTTGG +
Preference number: 6 (lower is better)
Translates to: VVLLESSPIEVPVVL*LVRVAEVSDTVEGW
Trigger: CCAACCTTCCACAGTGTCAGAGACTTCAGCTACTCTTACAAGCAATAGTACCACTGGCACTTCTATAGGAGATGACTCAAGGAGAACTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CAA 90 bp TTCATGATAGCTGGTACCAGAACTACTATTTGCTCCACAAGGTGCTaGTACTTGTGGAGGTCTTTCCACAGGGCAAGCAGGATCACTAAA +
Preference number: 6 (lower is better)
Translates to: FMIAGTRTTICSTRC*YLWRSFHRASRITK
Trigger: TTTAGTGATCCTGCTTGCCCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCAAATAGTAGTTCTGGTACCAGCTATCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS GCA 72 bp AGTCCTAATATTCCCTGGTTTTCTTTAACACAATTCTaGACATACGAAGGGCCAGCCTGCTGGCTTTTGCGT +
Preference number: 6 (lower is better)
Translates to: SPNIPWFSLTQF*TYEGPACWLLR
Trigger: ACGCAAAAGCCAGCAGGCTGGCCCTTCGTATGTGCAGAATTGTGTTAAAGAAAACCAGGGAATATTAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559757.1
ENST00000561186.5
CDS GCA 72 bp AGGTTCATCTTCATCAACGGTAAGGTCCACAACTTCTaGTGCATTCTGCCTCAAGGGCTGTATAACAGTAGA +
Preference number: 6 (lower is better)
Translates to: RFIFINGKVHNF*CILPQGLYNSR
Trigger: TCTACTGTTATACAGCCCTTGAGGCAGAATGCAGCAGAAGTTGTGGACCTTACCGTTGATGAAGATGAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS GCA 72 bp ATCAACCATTGGTCAACACACACTTGGTGGAAAAGGTaGATACATGGAAGACGTCTCACATCTTCACCTTCC +
Preference number: 6 (lower is better)
Translates to: INHWSTHTWWKR*IHGRRLTSSPS
Trigger: GGAAGGTGAAGATGTGAGACGTCTTCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAATGGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000560952.1
ENST00000561186.5
CDS GCA 72 bp ATCAACCATTGGTCAACACACACTTGGTGGAAAAGGTaGATACATGGAAGACGTGCCTGTAATCCCAGCATT +
Preference number: 6 (lower is better)
Translates to: INHWSTHTWWKR*IHGRRACNPSI
Trigger: AATGCTGGGATTACAGGCACGTCTTCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAATGGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560080.1
CDS CCA 72 bp AGAACTACTATTTGCTCCACAAGGTGCTTGTACTTGTaGAGGTCTTTCCACAGGGCAAGCAGGATCACTAAA +
Preference number: 6 (lower is better)
Translates to: RTTICSTRCLYL*RSFHRASRITK
Trigger: TTTAGTGATCCTGCTTGCCCTGTGGAAAGACCTCCACAAGTACAAGCACCTTGTGGAGCAAATAGTAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CAA 90 bp GCTGAAGCAGTATCAGAGGCCTGCTCAGAGGTAGATGGATTTGAATaGTTAATGGAAGCGCTAGTAGCTTGTGATTCCATTCTTGCAGAA +
Preference number: 6 (lower is better)
Translates to: AEAVSEACSEVDGFE*LMEALVACDSILAE
Trigger: TTCTGCAAGAATGGAATCACAAGCTACTAGCGCTTCCATTAACAATTCAAATCCATCTACCTCTGAGCAGGCCTCTGATACTGCTTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CAA 90 bp TATGGGGCACTTCTTATTGGTAATCAACCATTGGTCAACACACACTaGGTGGAAAAGGTGCATACATGGAAGACGTCTCACATCTTCACC +
Preference number: 6 (lower is better)
Translates to: YGALLIGNQPLVNTH*VEKVHTWKTSHIFT
Trigger: GGTGAAGATGTGAGACGTCTTCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAATGGTTGATTACCAATAAGAAGTGCCCCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000560952.1
ENST00000561186.5
CDS GCA 72 bp AGATTCTGTCTCAGTCCGAGGCCACTTATGAGACCGTaGACTATGGCTTCTACTTTTAGCATTCAAAATGGT +
Preference number: 6 (lower is better)
Translates to: RFCLSPRPLMRP*TMASTFSIQNG
Trigger: ACCATTTTGAATGCTAAAAGTAGAAGCCATAGTGCACGGTCTCATAAGTGGCCTCGGACTGAGACAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CCA 72 bp TGTAGAGCTCGTTATATTCAGGAGTCCATTGAGACATaGGAAACTTTAAGGAAAGCCCAGAACTCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: CRARYIQESIET*ETLRKAQNSSS
Trigger: GCTGGAAGAGTTCTGGGCTTTCCTTAAAGTTTCCCATGTCTCAATGGACTCCTGAATATAACGAGCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559757.1
CDS CAA 72 bp GATGCAAAAGGATCCCTTTCAGACTCTCCTGTGTCTTaGGTGCATCAGAAGGAATCTCACTCTTCATATCCA +
Preference number: 6 (lower is better)
Translates to: DAKGSLSDSPVS*VHQKESHSSYP
Trigger: TGGATATGAAGAGTGAGATTCCTTCTGATGCACCAAAGACACAGGAGAGTCTGAAAGGGATCCTTTTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559160.1
ENST00000559209.5
ENST00000559757.1
ENST00000561186.5
CDS GCA 72 bp CAAAAGGATCCCTTTCAGACTCTCCTGTGTCTTTGGTaGATCAGAAGGAATCTCACTCTTCATATCCACTTT +
Preference number: 6 (lower is better)
Translates to: QKDPFQTLLCLW*IRRNLTLHIHF
Trigger: AAAGTGGATATGAAGAGTGAGATTCCTTCTGATGCACCAAAGACACAGGAGAGTCTGAAAGGGATCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559160.1
ENST00000559209.5
ENST00000559757.1
ENST00000561186.5
CDS GCA 72 bp CAAATCTCTTTCTGCATGGAAGTCTCCGTAACGAACTaGCATGTAAACAGGGTCTTTTCATTAACAATCCCG +
Preference number: 6 (lower is better)
Translates to: QISFCMEVSVTN*HVNRVFSLTIP
Trigger: CGGGATTGTTAATGAAAAGACCCTGTTTACATGGCAGTTCGTTACGGAGACTTCCATGCAGAAAGAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000561186.5
CDS CCA 72 bp GTTGAGGTAACATTAATTTCTTCATTGGCAGTAACCTaGGGAGTGGAGGAAGCTTCTATCACCACAACATCT +
Preference number: 6 (lower is better)
Translates to: VEVTLISSLAVT*GVEEASITTTS
Trigger: AGATGTTGTGGTGATAGAAGCTTCCTCCACTCCCCAGGTTACTGCCAATGAAGAAATTAATGTTACCTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CCA 72 bp CTGCATATGGGGCACTTCTTATTGGTAATCAACCATTaGTCAACACACACTTGGTGGAAAAGGTGCATACAT +
Preference number: 6 (lower is better)
Translates to: LHMGHFLLVINH*STHTWWKRCIH
Trigger: ATGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAATGGTTGATTACCAATAAGAAGTGCCCCATATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000560080.1
ENST00000560952.1
ENST00000561186.5
CDS CAA 72 bp GTATCAGAGGCCTGCTCAGAGGTAGATGGATTTGAATaGTTAATGGAAGCGCTAGTAGCTTGTGATTCCATT +
Preference number: 6 (lower is better)
Translates to: VSEACSEVDGFE*LMEALVACDSI
Trigger: AATGGAATCACAAGCTACTAGCGCTTCCATTAACAATTCAAATCCATCTACCTCTGAGCAGGCCTCTGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000559592.1
ENST00000561186.5
CDS CAA 72 bp TCTGCATATGGGGCACTTCTTATTGGTAATCAACCATaGGTCAACACACACTTGGTGGAAAAGGTGCATACA +
Preference number: 6 (lower is better)
Translates to: SAYGALLIGNQP*VNTHLVEKVHT
Trigger: TGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAATGGTTGATTACCAATAAGAAGTGCCCCATATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000560080.1
ENST00000560952.1
ENST00000561186.5
CDS CCA 72 bp TTATTGGTAATCAACCATTGGTCAACACACACTTGGTaGAAAAGGTGCATACATGGAAGACGTCTCACATCT +
Preference number: 6 (lower is better)
Translates to: LLVINHWSTHTW*KRCIHGRRLTS
Trigger: AGATGTGAGACGTCTTCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAATGGTTGATTACCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000560952.1
ENST00000561186.5
CDS CCA 72 bp TGTAGAGCTCGTTATATTCAGGAGTCCATTGAGACATaGGAAACTTTAAGGAAAGCCTTCATCACTCCATTG +
Preference number: 6 (lower is better)
Translates to: CRARYIQESIET*ETLRKAFITPL
Trigger: CAATGGAGTGATGAAGGCTTTCCTTAAAGTTTCCCATGTCTCAATGGACTCCTGAATATAACGAGCTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557998.5
CDS CCA 72 bp TTATTGGTAATCAACCATTGGTCAACACACACTTGGTaGAAAAGGTGCATACATGGAAGACGTGCCTGTAAT +
Preference number: 6 (lower is better)
Translates to: LLVINHWSTHTW*KRCIHGRRACN
Trigger: ATTACAGGCACGTCTTCCATGTATGCACCTTTTCCACCAAGTGTGTGTTGACCAATGGTTGATTACCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560080.1
CDS TCA 72 bp TACATCTTTCAATTGTCCCCTGGGATGCTCCACGATTaGCATTGCCTAATCTTTCTTCCAAATGAATCAGTT +
Preference number: 6 (lower is better)
Translates to: YIFQLSPGMLHD*HCLIFLPNESV
Trigger: AACTGATTCATTTGGAAGAAAGATTAGGCAATGTCAATCGTGGAGCATCCCAGGGGACAATTGAAAGATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348370.9
ENST00000557998.5
ENST00000559209.5
ENST00000560216.5
ENST00000560952.1
ENST00000561186.5
CDS CCA 72 bp TGTAGAGCTCGTTATATTCAGGAGTCCATTGAGACATaGGAAACTTTAAGGAAAGCCTTAATCATTAGCCAC +
Preference number: 6 (lower is better)
Translates to: CRARYIQESIET*ETLRKALIISH
Trigger: GTGGCTAATGATTAAGGCTTTCCTTAAAGTTTCCCATGTCTCAATGGACTCCTGAATATAACGAGCTCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348370.9
ENST00000559209.5