Pregenerated sensors for RN7SK (Homo sapiens)

Ensembl gene IDs: ENSG00000283293

Ensembl transcript IDs: ENST00000636484.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	CTTCGACCGAGCGCGCAGCTTCGGGAGGGACGCACATaGAGCGGTGAGGGAGGAAGGGGACACCCGCCTAGC	+
Preference number: 6 (lower is better) Translates to: LRPSAQLREGRT*SGEGGRGHPPS Trigger: GCTAGGCGGGTGTCCCCTTCCTCCCTCACCGCTCCATGTGCGTCCCTCCCGAAGCTGCGCGCTCGGTCGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636484.1
CDS TCA 72 bp	GGTTCTAGCAGGGGAGCGCAGCTACTCGTATACCCTTaGCCGAAGACCGGTCCTCCTCTATCGGGGATGGTC	+
Preference number: 6 (lower is better) Translates to: GSSRGAQLLVYP*PKTGPPLSGMV Trigger: GACCATCCCCGATAGAGGAGGACCGGTCTTCGGTCAAGGGTATACGAGTAGCTGCGCTCCCCTGCTAGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636484.1
CDS CAA 90 bp	GAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTaGAGAGCTTGTTTGGAGGTTCTAGCAGGGGAGCGCAGCTACTCG	+
Preference number: 6 (lower is better) Translates to: ESWKLDYPTFSYKWT*RACLEVLAGERSYS Trigger: CGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAGCTCTCAAGGTCCATTTGTAGGAGAACGTAGGGTAGTCAAGCTTCCAAGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636484.1
CDS CAA 90 bp	CTTGACTACCCTACGTTCTCCTACAAATGGACCTTGAGAGCTTGTTaGGAGGTTCTAGCAGGGGAGCGCAGCTACTCGTATACCCTTGAC	+
Preference number: 6 (lower is better) Translates to: LDYPTFSYKWTLRAC*EVLAGERSYSYTLD Trigger: GTCAAGGGTATACGAGTAGCTGCGCTCCCCTGCTAGAACCTCCAAACAAGCTCTCAAGGTCCATTTGTAGGAGAACGTAGGGTAGTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636484.1
CDS TCA 72 bp	GCGCCTCATTTGGATGTGTCTGGAGTCTTGGAAGCTTaGCTACCCTACGTTCTCCTACAAATGGACCTTGAG	+
Preference number: 6 (lower is better) Translates to: APHLDVSGVLEA*LPYVLLQMDLE Trigger: CTCAAGGTCCATTTGTAGGAGAACGTAGGGTAGTCAAGCTTCCAAGACTCCAGACACATCCAAATGAGGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636484.1
CDS CCA 72 bp	CACATGCAGCGCCTCATTTGGATGTGTCTGGAGTCTTaGAAGCTTGACTACCCTACGTTCTCCTACAAATGG	+
Preference number: 6 (lower is better) Translates to: HMQRLIWMCLES*KLDYPTFSYKW Trigger: CCATTTGTAGGAGAACGTAGGGTAGTCAAGCTTCCAAGACTCCAGACACATCCAAATGAGGCGCTGCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636484.1
CDS CCA 72 bp	TCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATaGACCTTGAGAGCTTGTTTGGAGGTTCTAGCAGGG	+
Preference number: 6 (lower is better) Translates to: SWKLDYPTFSYK*TLRACLEVLAG Trigger: CCCTGCTAGAACCTCCAAACAAGCTCTCAAGGTCCATTTGTAGGAGAACGTAGGGTAGTCAAGCTTCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636484.1

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