RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RING1 (Homo sapiens)

Ensembl gene IDs: ENSG00000204227, ENSG00000228520

Ensembl transcript IDs: ENST00000374656.5, ENST00000383212.4, ENST00000415941.2, ENST00000427374.2, ENST00000430233.2, ENST00000436128.2, ENST00000472412.1, ENST00000478431.1, ENST00000479405.1, ENST00000482708.1, ENST00000484884.1, ENST00000498835.1

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCTCTTATTGGCTGGCTaGGCTGGGGGTACTGGGGGA +
Preference number: 2 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGLLLAG*AGGTGG
Trigger: TCCCCCAGTACCCCCAGCCCAGCCAGCCAATAAGAG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTCACAGGGATACCCCATaGTCCCCTTCCTCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRHRDTP*SPSSGC
Trigger: ACAGCCAGAGGAAGGGGACCATGGGGTATCCCTGTG...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTCTTATTGGCTGGCTaGGCTGGGGGTACTGGGGGA +
Preference number: 2 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGLLLAG*AGGTGG
Trigger: TCCCCCAGTACCCCCAGCCCAGCCAGCCAATAAGAG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACTCTTATTGGCTGGCTaGGCTGGGGGTACTGGGGGA +
Preference number: 2 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTLLLAG*AGGTGG
Trigger: TCCCCCAGTACCCCCAGCCCAGCCAGCCAATAAGAG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAACTCTTATTGGCTGGCTaGGCTGGGGGTACTGGGGGA +
Preference number: 2 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQLLLAG*AGGTGG
Trigger: TCCCCCAGTACCCCCAGCCCAGCCAGCCAATAAGAG...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTGTCCTCTTATTGGCTaGCTGGGCTGGGGGTACTGG +
Preference number: 2 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGCPLIG*LGWGYW
Trigger: CCAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACA...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCACAGGGATACCCCATaGTCCCCTTCCTCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGHRDTP*SPSSGC
Trigger: ACAGCCAGAGGAAGGGGACCATGGGGTATCCCTGTG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGTGTCCTCTTATTGGCTaGCTGGGCTGGGGGTACTGG +
Preference number: 2 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGCPLIG*LGWGYW
Trigger: CCAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACA...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGGGGGACAAAGAAGCTaGGGTGATAGACCAGGACAC +
Preference number: 2 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSGGQRS*GDRPGH
Trigger: GTGTCCTGGTCTATCACCCCAGCTTCTTTGTCCCCC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACATTTGTGTCCTCTTATTaGCTGGCTGGGCTGGGGGTA +
Preference number: 2 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTFVSSY*LAGLGV
Trigger: TACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAA...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR GCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGATGGGGGCGTGTTTTaGCCCACTCTGTACAATATA +
Preference number: 2 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGDGGVF*PTLYNI
Trigger: TATATTGTACAGAGTGGGGCAAAACACGCCCCCATC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGGGACAAAGAAGCTaGGGTGATAGACCAGGACAC +
Preference number: 2 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWGGQRS*GDRPGH
Trigger: GTGTCCTGGTCTATCACCCCAGCTTCTTTGTCCCCC...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR GCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAGATGGGGGCGTGTTTTaGCCCACTCTGTACAATATA +
Preference number: 2 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTDGGVF*PTLYNI
Trigger: TATATTGTACAGAGTGGGGCAAAACACGCCCCCATC...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR GCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAGATGGGGGCGTGTTTTaGCCCACTCTGTACAATATA +
Preference number: 2 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQDGGVF*PTLYNI
Trigger: TATATTGTACAGAGTGGGGCAAAACACGCCCCCATC...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACACAGGGATACCCCATaGTCCCCTTCCTCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKHRDTP*SPSSGC
Trigger: ACAGCCAGAGGAAGGGGACCATGGGGTATCCCTGTG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAATTTGTGTCCTCTTATTaGCTGGCTGGGCTGGGGGTA +
Preference number: 2 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKFVSSY*LAGLGV
Trigger: TACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAA...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CAA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTATTTGTGTCCTCTTATaGGCTGGCTGGGCTGGGGGT +
Preference number: 3 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRICVLL*AGWAGG
Trigger: ACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAAT...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CAA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAATTTGTGTCCTCTTATaGGCTGGCTGGGCTGGGGGT +
Preference number: 3 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQICVLL*AGWAGG
Trigger: ACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAAT...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGATTTGTGTCCTCTTATaGGCTGGCTGGGCTGGGGGT +
Preference number: 3 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGICVLL*AGWAGG
Trigger: ACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAAT...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CAA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAGATGGGGGCGTGTTTaGCCCCACTCTGTACAATAT +
Preference number: 3 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGRWGRV*PHSVQY
Trigger: ATATTGTACAGAGTGGGGCAAAACACGCCCCCATCT...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CAA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGCCACGTGTCCTCATTaGTGTCCTCTTATTGGCTGG +
Preference number: 3 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSATCPH*CPLIGW
Trigger: CCAGCCAATAAGAGGACACAAATGAGGACACGTGGC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CAA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAAGATGGGGGCGTGTTTaGCCCCACTCTGTACAATAT +
Preference number: 3 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTRWGRV*PHSVQY
Trigger: ATATTGTACAGAGTGGGGCAAAACACGCCCCCATCT...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGAGATGGGGGCGTGTTTaGCCCCACTCTGTACAATAT +
Preference number: 3 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGRWGRV*PHSVQY
Trigger: ATATTGTACAGAGTGGGGCAAAACACGCCCCCATCT...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CAA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAATTTGTGTCCTCTTATaGGCTGGCTGGGCTGGGGGT +
Preference number: 3 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKICVLL*AGWAGG
Trigger: ACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAAT...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR-3UTR CAA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAAGATGGGGGCGTGTTTaGCCCCACTCTGTACAATAT +
Preference number: 3 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKRWGRV*PHSVQY
Trigger: ATATTGTACAGAGTGGGGCAAAACACGCCCCCATCT...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGGCCGCCTCACACGCTaGGCCCTGTGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGGRLTR*ALCMAC
Trigger: GCAGGCCATGCACAGGGCCCAGCGTGTGAGGCGGCC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGGCTCCCCTGCTTCCTaGTGTTGCCTCCGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLGSPAS*CCLRSR
Trigger: CCTCGAGCGGAGGCAACAGCAGGAAGCAGGGGAGCC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGCTGGGCCCTGTGCATaGCCTGCATGCGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLAGPCA*PACVAP
Trigger: AGGGGCTACGCATGCAGGCCATGCACAGGGCCCAGC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAGGCCGCCTCACACGCTaGGCCCTGTGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTGRLTR*ALCMAC
Trigger: GCAGGCCATGCACAGGGCCCAGCGTGTGAGGCGGCC...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGGGCCGCCTCACACGCTaGGCCCTGTGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGGRLTR*ALCMAC
Trigger: GCAGGCCATGCACAGGGCCCAGCGTGTGAGGCGGCC...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTCCACGGGGTCGCTTaGGAGCAGGGCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGLHGVA*EQGLGQ
Trigger: CTGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGAG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACTCCACGGGGTCGCTTaGGAGCAGGGCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTLHGVA*EQGLGQ
Trigger: CTGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGAG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTTCGGTCCGCAACCGCTaGTCAGACAGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRSVRNR*SDSSSR
Trigger: GCGGGAGCTGCTGTCTGAGCAGCGGTTGCGGACCGA...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGCCCTGTGCATGGCCTaGATGCGTAGCCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLALCMA*MRSPSS
Trigger: TGAGGAGGGGCTACGCATGCAGGCCATGCACAGGGC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGGCTCCCCTGCTTCCTaGTGTTGCCTCCGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRGSPAS*CCLRSR
Trigger: CCTCGAGCGGAGGCAACAGCAGGAAGCAGGGGAGCC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCCCTCCTGGCTCCCCTaGTTCCTGCTGTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGPSWLP*FLLLPP
Trigger: CGGAGGCAACAGCAGGAAGCAGGGGAGCCAGGAGGG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACTAGGCCCGGGCTCCTaGGCCAAGTTCGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTLGPGS*AKFARS
Trigger: GGACCGAGCGAACTTGGCCCAGGAGCCCGGGCCTAG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTAGGCCCGGGCTCCTaGGCCAAGTTCGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGLGPGS*AKFARS
Trigger: GGACCGAGCGAACTTGGCCCAGGAGCCCGGGCCTAG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGCTGGGCCCTGTGCATaGCCTGCATGCGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRAGPCA*PACVAP
Trigger: AGGGGCTACGCATGCAGGCCATGCACAGGGCCCAGC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGCTGGGCCCTGTGCATaGCCTGCATGCGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGAGPCA*PACVAP
Trigger: AGGGGCTACGCATGCAGGCCATGCACAGGGCCCAGC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGGCCGCCTCACACGCTaGGCCCTGTGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSGRLTR*ALCMAC
Trigger: GCAGGCCATGCACAGGGCCCAGCGTGTGAGGCGGCC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCCTCCACGGGGTCGCTTaGGAGCAGGGCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSLHGVA*EQGLGQ
Trigger: CTGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGAG...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCGTTGTGGTCTGATCTaGCCCTGGTATCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLRCGLI*PWYRPP
Trigger: AGGCGGCCGATACCAGGGTCAGATCAGACCACAACG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGTTGGTAGGCGGGCGTaGATGGGAGGGTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLVGRRA*MGGFFT
Trigger: GGTGAAGAACCCTCCCATTCACGCCCGCCTACCAAC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATCGGTCCGCAACCGCTaGTCAGACAGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQSVRNR*SDSSSR
Trigger: GCGGGAGCTGCTGTCTGAGCAGCGGTTGCGGACCGA...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCTGGAGCTCAATGCCTaGTGGTTGTGCAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLLELNA*WLCRRL
Trigger: GAGCCGCCTGCACAACCAGCAGGCATTGAGCTCCAG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGCCCTGTGCATGGCCTaGATGCGTAGCCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGALCMA*MRSPSS
Trigger: TGAGGAGGGGCTACGCATGCAGGCCATGCACAGGGC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTACACGCTGGGCCCTGTaGATGGCCTGCATGCGTAGC +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRTRWAL*MACMRS
Trigger: GCTACGCATGCAGGCCATGCACAGGGCCCAGCGTGT...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCCTCCTGGCTCCCCTaGTTCCTGCTGTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGPSWLP*FLLLPP
Trigger: CGGAGGCAACAGCAGGAAGCAGGGGAGCCAGGAGGG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCCTAGGCCCGGGCTCCTaGGCCAAGTTCGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSLGPGS*AKFARS
Trigger: GGACCGAGCGAACTTGGCCCAGGAGCCCGGGCCTAG...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCTCCACGGGGTCGCTTaGGAGCAGGGCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWLHGVA*EQGLGQ
Trigger: CTGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGAG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACATCCACGAGCAGGGGGTaGGGCCGGAACACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTSTSRG*GRNTSS
Trigger: TGAGCTCGTGTTCCGGCCCCACCCCCTGCTCGTGGA...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGTCCACGAGCAGGGGGTaGGGCCGGAACACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGSTSRG*GRNTSS
Trigger: TGAGCTCGTGTTCCGGCCCCACCCCCTGCTCGTGGA...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCCTCTGGCTGTCCCCTaGTGGGGTCACTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLPLAVP*WGHFGS
Trigger: GGATCCAAAGTGACCCCACCAGGGGACAGCCAGAGG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCTCTTATTGGCTGGCTaGGCTGGGGGTACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLLLLAG*AGGTGG
Trigger: TCCCCCAGTACCCCCAGCCCAGCCAGCCAATAAGAG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCGTTGTGGTCTGATCTaGCCCTGGTATCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGRCGLI*PWYRPP
Trigger: AGGCGGCCGATACCAGGGTCAGATCAGACCACAACG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGTCAGGGGCGGAGTCTaGGCTCACATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLVRGGV*AHIFSI
Trigger: GATGGAGAAGATGTGAGCTCAGACTCCGCCCCTGAC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGTTGGTAGGCGGGCGTaGATGGGAGGGTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGVGRRA*MGGFFT
Trigger: GGTGAAGAACCCTCCCATTCACGCCCGCCTACCAAC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGTTGGTAGGCGGGCGTaGATGGGAGGGTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRVGRRA*MGGFFT
Trigger: GGTGAAGAACCCTCCCATTCACGCCCGCCTACCAAC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCTGGAGCTCAATGCCTaGTGGTTGTGCAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGLELNA*WLCRRL
Trigger: GAGCCGCCTGCACAACCAGCAGGCATTGAGCTCCAG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAGCCCTGTGCATGGCCTaGATGCGTAGCCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTALCMA*MRSPSS
Trigger: TGAGGAGGGGCTACGCATGCAGGCCATGCACAGGGC...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAACACGCTGGGCCCTGTaGATGGCCTGCATGCGTAGC +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTTRWAL*MACMRS
Trigger: GCTACGCATGCAGGCCATGCACAGGGCCCAGCGTGT...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTCCTGCTTCCTGCTGTTaGCTCCGCTCGAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRPASCC*LRSRAM
Trigger: CATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGG...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCCCCTCCTGGCTCCCCTaGTTCCTGCTGTTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSPSWLP*FLLLPP
Trigger: CGGAGGCAACAGCAGGAAGCAGGGGAGCCAGGAGGG...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTCGCCCCGCCTCCAGGTaGGATGTAGATGGTGTACTG +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRRPASR*DVDGVL
Trigger: CAGTACACCATCTACATCGCACCTGGAGGCGGGGCG...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCTGTGCCATCCATTATaGCTTCCTGCGGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLLCHPL*LPAGSG
Trigger: ACCGGACCCCGCAGGAAGCCATAATGGATGGCACAG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGCTGGGCCCTGTGCATaGCCTGCATGCGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSAGPCA*PACVAP
Trigger: AGGGGCTACGCATGCAGGCCATGCACAGGGCCCAGC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCCTCCACGGGGTCGCTTaGGAGCAGGGCCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGLHGVA*EQGLGQ
Trigger: CTGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGAG...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCTCCACGAGCAGGGGGTaGGGCCGGAACACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSSTSRG*GRNTSS
Trigger: TGAGCTCGTGTTCCGGCCCCACCCCCTGCTCGTGGA...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGCAGGGCCAAGTACTTaGAGAGGTGGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLAGPST*RGGPLW
Trigger: CCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCTGGCTGTCCCCTGGTaGGGTCACTTTGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLLAVPW*GHFGSL
Trigger: CAAGGATCCAAAGTGACCCCACCAGGGGACAGCCAG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCCTCTGGCTGTCCCCTaGTGGGGTCACTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGPLAVP*WGHFGS
Trigger: GGATCCAAAGTGACCCCACCAGGGGACAGCCAGAGG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGTGTCCTCTTATTGGCTaGCTGGGCTGGGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLCPLIG*LGWGYW
Trigger: CCAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACA...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTCGCTCCGTAGGGCTGTaGCAATGCAGTCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRRSVGL*QCSQSR
Trigger: TCTGCTCTGACTGCATTGTCACAGCCCTACGGAGCG...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGTCAGGGGCGGAGTCTaGGCTCACATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGVRGGV*AHIFSI
Trigger: GATGGAGAAGATGTGAGCTCAGACTCCGCCCCTGAC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTGTACTGCTTTTCACTaGCGCCCTCCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGCTAFH*RPPGWA
Trigger: TGCCCAGCCTGGAGGGCGTCAGTGAAAAGCAGTACA...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAGTTGGTAGGCGGGCGTaGATGGGAGGGTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQVGRRA*MGGFFT
Trigger: GGTGAAGAACCCTCCCATTCACGCCCGCCTACCAAC...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTAATGCCTGCTGGTTGTaGAGGCGGCTCAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRNACWL*RRLRRI
Trigger: TATCCGCCTGAGCCGCCTGCACAACCAGCAGGCATT...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGAATGCTGGAGCTCAATaGCTGCTGGTTGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLNAGAQ*LLVVQA
Trigger: CGCCTGCACAACCAGCAGGCATTGAGCTCCAGCATT...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCACACGCTGGGCCCTGTaGATGGCCTGCATGCGTAGC +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSTRWAL*MACMRS
Trigger: GCTACGCATGCAGGCCATGCACAGGGCCCAGCGTGT...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCTGCTTCCTGCTGTTaGCTCCGCTCGAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGPASCC*LRSRAM
Trigger: CATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGCCCCGCCTCCAGGTaGGATGTAGATGGTGTACTG +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGRPASR*DVDGVL
Trigger: CAGTACACCATCTACATCGCACCTGGAGGCGGGGCG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAACGCCCCGCCTCCAGGTaGGATGTAGATGGTGTACTG +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQRPASR*DVDGVL
Trigger: CAGTACACCATCTACATCGCACCTGGAGGCGGGGCG...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACGCCCCGCCTCCAGGTaGGATGTAGATGGTGTACTG +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTRPASR*DVDGVL
Trigger: CAGTACACCATCTACATCGCACCTGGAGGCGGGGCG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCCTAGGCCCGGGCTCCTaGGCCAAGTTCGCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGLGPGS*AKFARS
Trigger: GGACCGAGCGAACTTGGCCCAGGAGCCCGGGCCTAG...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGTTCCCACGTTTTGCTaGCATTCTGGGCATTCGCCG +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLVPTFC*HSGHSP
Trigger: CGGCGAATGCCCAGAATGCCAGCAAAACGTGGGAAC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGCCGTAGGGATCGCTTaGACACCAGCTTCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGAVGIA*TPASFG
Trigger: GCCGAAAGAAGCTGGTGTCCAAGCGATCCCTACGGC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAGAGCTCAATGCCTGCTaGTTGTGCAGGCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQELNAC*LCRRLR
Trigger: CCTGAGCCGCCTGCACAACCAGCAGGCATTGAGCTC...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGCCCCTCCTCAATGCTaGAGCTCAATGCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGAPPQC*SSMPAG
Trigger: ACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGCCCCTCCTCAATGCTaGAGCTCAATGCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRAPPQC*SSMPAG
Trigger: ACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGCTGGGCCCTGTGCATaGCCTGCATGCGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWAGPCA*PACVAP
Trigger: AGGGGCTACGCATGCAGGCCATGCACAGGGCCCAGC...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCCGCCTCACACGCTaGGCCCTGTGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKGRLTR*ALCMAC
Trigger: GCAGGCCATGCACAGGGCCCAGCGTGTGAGGCGGCC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGATAGCACAGCTCCAGTaGCCGGGACACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLIAQLQ*PGHLPE
Trigger: TTCTGGAAGGTGTCCCGGCCACTGGAGCTGTGCTAT...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCTGGCTGTCCCCTGGTaGGGTCACTTTGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGLAVPW*GHFGSL
Trigger: CAAGGATCCAAAGTGACCCCACCAGGGGACAGCCAG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAACCTCTGGCTGTCCCCTaGTGGGGTCACTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQPLAVP*WGHFGS
Trigger: GGATCCAAAGTGACCCCACCAGGGGACAGCCAGAGG...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCTCTGGCTGTCCCCTaGTGGGGTCACTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGPLAVP*WGHFGS
Trigger: GGATCCAAAGTGACCCCACCAGGGGACAGCCAGAGG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTTGTCCTCTTATTGGCTaGCTGGGCTGGGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRCPLIG*LGWGYW
Trigger: CCAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACA...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGTAGGCGGGCGTGAATaGGAGGGTTCTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLVGGRE*EGSSPS
Trigger: AGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTAC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGCTCCGTAGGGCTGTaGCAATGCAGTCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGRSVGL*QCSQSR
Trigger: TCTGCTCTGACTGCATTGTCACAGCCCTACGGAGCG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAACGCTCCGTAGGGCTGTaGCAATGCAGTCAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQRSVGL*QCSQSR
Trigger: TCTGCTCTGACTGCATTGTCACAGCCCTACGGAGCG...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCCGTTGTGGTCTGATCTaGCCCTGGTATCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSRCGLI*PWYRPP
Trigger: AGGCGGCCGATACCAGGGTCAGATCAGACCACAACG...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTCTCATCGTTGTGGTCTaGTCTGACCCTGGTATCGGC +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRLIVVV*SDPGIG
Trigger: GCCGATACCAGGGTCAGATCAGACCACAACGATGAG...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATGTACTGCTTTTCACTaGCGCCCTCCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQCTAFH*RPPGWA
Trigger: TGCCCAGCCTGGAGGGCGTCAGTGAAAAGCAGTACA...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACATGTACTGCTTTTCACTaGCGCCCTCCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTCTAFH*RPPGWA
Trigger: TGCCCAGCCTGGAGGGCGTCAGTGAAAAGCAGTACA...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTCGGTCCGCAACCGCTaGTCAGACAGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGSVRNR*SDSSSR
Trigger: GCGGGAGCTGCTGTCTGAGCAGCGGTTGCGGACCGA...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAAATGCCTGCTGGTTGTaGAGGCGGCTCAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTNACWL*RRLRRI
Trigger: TATCCGCCTGAGCCGCCTGCACAACCAGCAGGCATT...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGAATGCCTGCTGGTTGTaGAGGCGGCTCAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGNACWL*RRLRRI
Trigger: TATCCGCCTGAGCCGCCTGCACAACCAGCAGGCATT...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCCTGGAGCTCAATGCCTaGTGGTTGTGCAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSLELNA*WLCRRL
Trigger: GAGCCGCCTGCACAACCAGCAGGCATTGAGCTCCAG...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATGCTGGAGCTCAATaGCTGCTGGTTGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGNAGAQ*LLVVQA
Trigger: CGCCTGCACAACCAGCAGGCATTGAGCTCCAGCATT...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGTAGCCCCTCCTCAATaGTGGAGCTCAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRVAPPQ*WSSMPA
Trigger: AGCAGGCATTGAGCTCCAGCATTGAGGAGGGGCTAC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGTGTGCATGGCCTGCATaGGTAGCCCCTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGCAWPA*VAPPQC
Trigger: GCATTGAGGAGGGGCTACGCATGCAGGCCATGCACA...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACATGTGCATGGCCTGCATaGGTAGCCCCTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTCAWPA*VAPPQC
Trigger: GCATTGAGGAGGGGCTACGCATGCAGGCCATGCACA...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGCCCTGTGCATGGCCTaGATGCGTAGCCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWALCMA*MRSPSS
Trigger: TGAGGAGGGGCTACGCATGCAGGCCATGCACAGGGC...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCGGCTCCCCTGCTTCCTaGTGTTGCCTCCGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGGSPAS*CCLRSR
Trigger: CCTCGAGCGGAGGCAACAGCAGGAAGCAGGGGAGCC...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGTTCCCACGTTTTGCTaGCATTCTGGGCATTCGCCG +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRVPTFC*HSGHSP
Trigger: CGGCGAATGCCCAGAATGCCAGCAAAACGTGGGAAC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACTGTGCCATCCATTATaGCTTCCTGCGGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTLCHPL*LPAGSG
Trigger: ACCGGACCCCGCAGGAAGCCATAATGGATGGCACAG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTGTGCCATCCATTATaGCTTCCTGCGGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGLCHPL*LPAGSG
Trigger: ACCGGACCCCGCAGGAAGCCATAATGGATGGCACAG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGTCAGAGCAGAATCTGTaGAGGCACTCCTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLSEQNL*RHSLVV
Trigger: GACCACCAAGGAGTGCCTCCACAGATTCTGCTCTGA...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGAGCTCAATGCCTGCTaGTTGTGCAGGCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSELNAC*LCRRLR
Trigger: CCTGAGCCGCCTGCACAACCAGCAGGCATTGAGCTC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAGCCCCTCCTCAATGCTaGAGCTCAATGCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQAPPQC*SSMPAG
Trigger: ACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGC...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGGCCCCTCCTCAATGCTaGAGCTCAATGCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGAPPQC*SSMPAG
Trigger: ACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGC...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCGCTGGGCCCTGTGCATaGCCTGCATGCGTAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGAGPCA*PACVAP
Trigger: AGGGGCTACGCATGCAGGCCATGCACAGGGCCCAGC...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTCCACGAGCAGGGGGTaGGGCCGGAACACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGSTSRG*GRNTSS
Trigger: TGAGCTCGTGTTCCGGCCCCACCCCCTGCTCGTGGA...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAGCAGGGCCAAGTACTTaGAGAGGTGGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTAGPST*RGGPLW
Trigger: CCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGC...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAACTGGCTGTCCCCTGGTaGGGTCACTTTGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQLAVPW*GHFGSL
Trigger: CAAGGATCCAAAGTGACCCCACCAGGGGACAGCCAG...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGGGGGACAAAGAAGCTaGGGTGATAGACCAGGACAC +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRGGQRS*GDRPGH
Trigger: GTGTCCTGGTCTATCACCCCAGCTTCTTTGTCCCCC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGGGGGACAAAGAAGCTaGGGTGATAGACCAGGACAC +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGGGQRS*GDRPGH
Trigger: GTGTCCTGGTCTATCACCCCAGCTTCTTTGTCCCCC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATGTCCTCTTATTGGCTaGCTGGGCTGGGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQCPLIG*LGWGYW
Trigger: CCAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACA...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGTAGGCGGGCGTGAATaGGAGGGTTCTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGVGGRE*EGSSPS
Trigger: AGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTAC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCATAAGCACTCGGTCTTaGTGGGCCTCGTATTCCTCC +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGISTRS*WASYSS
Trigger: GGAGGAATACGAGGCCCATCAAGACCGAGTGCTTAT...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACTCATCGTTGTGGTCTaGTCTGACCCTGGTATCGGC +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTLIVVV*SDPGIG
Trigger: GCCGATACCAGGGTCAGATCAGACCACAACGATGAG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAACTCATCGTTGTGGTCTaGTCTGACCCTGGTATCGGC +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQLIVVV*SDPGIG
Trigger: GCCGATACCAGGGTCAGATCAGACCACAACGATGAG...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTCATCGTTGTGGTCTaGTCTGACCCTGGTATCGGC +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGLIVVV*SDPGIG
Trigger: GCCGATACCAGGGTCAGATCAGACCACAACGATGAG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCTGTACTGCTTTTCACTaGCGCCCTCCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSCTAFH*RPPGWA
Trigger: TGCCCAGCCTGGAGGGCGTCAGTGAAAAGCAGTACA...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCTGGAGCTCAATGCCTaGTGGTTGTGCAGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWLELNA*WLCRRL
Trigger: GAGCCGCCTGCACAACCAGCAGGCATTGAGCTCCAG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGAATGCTGGAGCTCAATaGCTGCTGGTTGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGNAGAQ*LLVVQA
Trigger: CGCCTGCACAACCAGCAGGCATTGAGCTCCAGCATT...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAAATGCTGGAGCTCAATaGCTGCTGGTTGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQNAGAQ*LLVVQA
Trigger: CGCCTGCACAACCAGCAGGCATTGAGCTCCAGCATT...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCCTGCTTCCTGCTGTTaGCTCCGCTCGAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWPASCC*LRSRAM
Trigger: CATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCTCCCCTGCTTCCTaGTGTTGCCTCCGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKGSPAS*CCLRSR
Trigger: CCTCGAGCGGAGGCAACAGCAGGAAGCAGGGGAGCC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCGCCCCGCCTCCAGGTaGGATGTAGATGGTGTACTG +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWRPASR*DVDGVL
Trigger: CAGTACACCATCTACATCGCACCTGGAGGCGGGGCG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGGTTCCCACGTTTTGCTaGCATTCTGGGCATTCGCCG +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGVPTFC*HSGHSP
Trigger: CGGCGAATGCCCAGAATGCCAGCAAAACGTGGGAAC...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTCAGAGCAGAATCTGTaGAGGCACTCCTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGSEQNL*RHSLVV
Trigger: GACCACCAAGGAGTGCCTCCACAGATTCTGCTCTGA...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTTCAGAGCAGAATCTGTaGAGGCACTCCTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRSEQNL*RHSLVV
Trigger: GACCACCAAGGAGTGCCTCCACAGATTCTGCTCTGA...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGCCGTAGGGATCGCTTaGACACCAGCTTCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSAVGIA*TPASFG
Trigger: GCCGAAAGAAGCTGGTGTCCAAGCGATCCCTACGGC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCCCCACTCATCGTTGTaGTCTGATCTGACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGPHSSL*SDLTLV
Trigger: TACCAGGGTCAGATCAGACCACAACGATGAGTGGGG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTCCCCACTCATCGTTGTaGTCTGATCTGACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRPHSSL*SDLTLV
Trigger: TACCAGGGTCAGATCAGACCACAACGATGAGTGGGG...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAATCCACGAGCAGGGGGTaGGGCCGGAACACGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKSTSRG*GRNTSS
Trigger: TGAGCTCGTGTTCCGGCCCCACCCCCTGCTCGTGGA...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAATAGCACAGCTCCAGTaGCCGGGACACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTIAQLQ*PGHLPE
Trigger: TTCTGGAAGGTGTCCCGGCCACTGGAGCTGTGCTAT...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGATAGCACAGCTCCAGTaGCCGGGACACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGIAQLQ*PGHLPE
Trigger: TTCTGGAAGGTGTCCCGGCCACTGGAGCTGTGCTAT...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCCACAGGGATACCCCATaGTCCCCTTCCTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSHRDTP*SPSSGC
Trigger: ACAGCCAGAGGAAGGGGACCATGGGGTATCCCTGTG...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCTCTTATTGGCTGGCTaGGCTGGGGGTACTGGGGGA +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWLLLAG*AGGTGG
Trigger: TCCCCCAGTACCCCCAGCCCAGCCAGCCAATAAGAG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTTTTGTGTCCTCTTATTaGCTGGCTGGGCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRFVSSY*LAGLGV
Trigger: TACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAA...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAGTAGGCGGGCGTGAATaGGAGGGTTCTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTVGGRE*EGSSPS
Trigger: AGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTAC...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAGTAGGCGGGCGTGAATaGGAGGGTTCTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQVGGRE*EGSSPS
Trigger: AGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTAC...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCCGTTGTGGTCTGATCTaGCCCTGGTATCGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGRCGLI*PWYRPP
Trigger: AGGCGGCCGATACCAGGGTCAGATCAGACCACAACG...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGTCAGGGGCGGAGTCTaGGCTCACATCTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWVRGGV*AHIFSI
Trigger: GATGGAGAAGATGTGAGCTCAGACTCCGCCCCTGAC...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGTAGCCCCTCCTCAATaGTGGAGCTCAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSVAPPQ*WSSMPA
Trigger: AGCAGGCATTGAGCTCCAGCATTGAGGAGGGGCTAC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGTGTGCATGGCCTGCATaGGTAGCCCCTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWCAWPA*VAPPQC
Trigger: GCATTGAGGAGGGGCTACGCATGCAGGCCATGCACA...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGCCCTGTGCATGGCCTaGATGCGTAGCCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKALCMA*MRSPSS
Trigger: TGAGGAGGGGCTACGCATGCAGGCCATGCACAGGGC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGATGGGGGCGTGTTTTaGCCCACTCTGTACAATATA +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLDGGVF*PTLYNI
Trigger: TATATTGTACAGAGTGGGGCAAAACACGCCCCCATC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGGAGGCACTCCTTGGTaGTCATCGTATTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRGGTPW*SSYSSA
Trigger: TGCTGAAGAATACGATGACCACCAAGGAGTGCCTCC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGTGTGGAGGCACTCCTTaGTGGTCATCGTATTCTTCA +
Preference number: 4 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLCGGTP*WSSYSS
Trigger: TGAAGAATACGATGACCACCAAGGAGTGCCTCCACA...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACATCAGAGCAGAATCTGTaGAGGCACTCCTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTSEQNL*RHSLVV
Trigger: GACCACCAAGGAGTGCCTCCACAGATTCTGCTCTGA...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGCCGTAGGGATCGCTTaGACACCAGCTTCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWAVGIA*TPASFG
Trigger: GCCGAAAGAAGCTGGTGTCCAAGCGATCCCTACGGC...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACCCCACTCATCGTTGTaGTCTGATCTGACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTPHSSL*SDLTLV
Trigger: TACCAGGGTCAGATCAGACCACAACGATGAGTGGGG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAGAGGTGGTCCACTGTaGCATTCCCAGTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGRGGPL*HSQLSS
Trigger: TGAAGACAACTGGGAATGCCACAGTGGACCACCTCT...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTAGAGGTGGTCCACTGTaGCATTCCCAGTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRRGGPL*HSQLSS
Trigger: TGAAGACAACTGGGAATGCCACAGTGGACCACCTCT...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTAAGTACTTGGAGAGGTaGTCCACTGTGGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRKYLER*STVAFP
Trigger: TGGGAATGCCACAGTGGACCACCTCTCCAAGTACTT...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGCAGGGCCAAGTACTTaGAGAGGTGGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWAGPST*RGGPLW
Trigger: CCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGC...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGTCACTTTGGATCCTTaGTGGGAGCATAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGVTLDP*WEHSTA
Trigger: AGCTGTGCTATGCTCCCACCAAGGATCCAAAGTGAC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCTGGCTGTCCCCTGGTaGGGTCACTTTGGATCCTTG +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWLAVPW*GHFGSL
Trigger: CAAGGATCCAAAGTGACCCCACCAGGGGACAGCCAG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCACAGGGATACCCCATaGTCCCCTTCCTCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWHRDTP*SPSSGC
Trigger: ACAGCCAGAGGAAGGGGACCATGGGGTATCCCTGTG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGTGTCCTCTTATTGGCTaGCTGGGCTGGGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWCPLIG*LGWGYW
Trigger: CCAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACA...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATTTGTGTCCTCTTATTaGCTGGCTGGGCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQFVSSY*LAGLGV
Trigger: TACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAA...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGTTTGTGTCCTCTTATTaGCTGGCTGGGCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGFVSSY*LAGLGV
Trigger: TACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAA...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGTAGGCGGGCGTGAATaGGAGGGTTCTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSVGGRE*EGSSPS
Trigger: AGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTAC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
3UTR CAA 72 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTaGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGT +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGT*QGNRKGSRWGR
Trigger: ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGTCAGTTCCCACGTTTTaGTGGCATTCTGGGCATTCG +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGSVPTF*WHSGHS
Trigger: CGAATGCCCAGAATGCCAGCAAAACGTGGGAACTGA...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTCACATGAGTTCTGAATaGAGTGACCGAGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRHMSSE*SDRGET
Trigger: TGTTTCCCCTCGGTCACTGCATTCAGAACTCATGTG...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCAATGCCTGCTGGTTGTaGAGGCGGCTCAGGCGGATA +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGNACWL*RRLRRI
Trigger: TATCCGCCTGAGCCGCCTGCACAACCAGCAGGCATT...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGTAGCCCCTCCTCAATaGTGGAGCTCAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWVAPPQ*WSSMPA
Trigger: AGCAGGCATTGAGCTCCAGCATTGAGGAGGGGCTAC...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACCTGCTTCCTGCTGTTaGCTCCGCTCGAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKPASCC*LRSRAM
Trigger: CATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACGCCCCGCCTCCAGGTaGGATGTAGATGGTGTACTG +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKRPASR*DVDGVL
Trigger: CAGTACACCATCTACATCGCACCTGGAGGCGGGGCG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGATGGGGGCGTGTTTTaGCCCACTCTGTACAATATA +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRDGGVF*PTLYNI
Trigger: TATATTGTACAGAGTGGGGCAAAACACGCCCCCATC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCCTGTGCCATCCATTATaGCTTCCTGCGGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGLCHPL*LPAGSG
Trigger: ACCGGACCCCGCAGGAAGCCATAATGGATGGCACAG...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAGGAGGCACTCCTTGGTaGTCATCGTATTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQGGTPW*SSYSSA
Trigger: TGCTGAAGAATACGATGACCACCAAGGAGTGCCTCC...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGGGAGGCACTCCTTGGTaGTCATCGTATTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGGGTPW*SSYSSA
Trigger: TGCTGAAGAATACGATGACCACCAAGGAGTGCCTCC...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAGGAGGCACTCCTTGGTaGTCATCGTATTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTGGTPW*SSYSSA
Trigger: TGCTGAAGAATACGATGACCACCAAGGAGTGCCTCC...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTTGTGGAGGCACTCCTTaGTGGTCATCGTATTCTTCA +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRCGGTP*WSSYSS
Trigger: TGAAGAATACGATGACCACCAAGGAGTGCCTCCACA...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCGCCGTAGGGATCGCTTaGACACCAGCTTCTTTCGGC +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGAVGIA*TPASFG
Trigger: GCCGAAAGAAGCTGGTGTCCAAGCGATCCCTACGGC...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGAGCTCAATGCCTGCTaGTTGTGCAGGCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKELNAC*LCRRLR
Trigger: CCTGAGCCGCCTGCACAACCAGCAGGCATTGAGCTC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCGCCCCTCCTCAATGCTaGAGCTCAATGCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGAPPQC*SSMPAG
Trigger: ACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGC...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTTCACATACCTCGTCTaGCAGTATTCTCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGFTYLV*QYSPFS
Trigger: GGAGAAGGGAGAATACTGCCAGACGAGGTATGTGAA...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAAGAGGTGGTCCACTGTaGCATTCCCAGTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTRGGPL*HSQLSS
Trigger: TGAAGACAACTGGGAATGCCACAGTGGACCACCTCT...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGAGAGGTGGTCCACTGTaGCATTCCCAGTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGRGGPL*HSQLSS
Trigger: TGAAGACAACTGGGAATGCCACAGTGGACCACCTCT...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAAAGTACTTGGAGAGGTaGTCCACTGTGGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTKYLER*STVAFP
Trigger: TGGGAATGCCACAGTGGACCACCTCTCCAAGTACTT...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCGCAGGGCCAAGTACTTaGAGAGGTGGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGAGPST*RGGPLW
Trigger: CCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGC...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAACTTTGGATCCTTGGTaGGAGCATAGCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQTLDPW*EHSTAP
Trigger: TGGAGCTGTGCTATGCTCCCACCAAGGATCCAAAGT...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGACTTTGGATCCTTGGTaGGAGCATAGCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGTLDPW*EHSTAP
Trigger: TGGAGCTGTGCTATGCTCCCACCAAGGATCCAAAGT...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGGTCACTTTGGATCCTTaGTGGGAGCATAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGVTLDP*WEHSTA
Trigger: AGCTGTGCTATGCTCCCACCAAGGATCCAAAGTGAC...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACCTCTGGCTGTCCCCTaGTGGGGTCACTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKPLAVP*WGHFGS
Trigger: GGATCCAAAGTGACCCCACCAGGGGACAGCCAGAGG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGTCCTCTTATTGGCTaGCTGGGCTGGGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGCPLIG*LGWGYW
Trigger: CCAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACA...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCTTTGTGTCCTCTTATTaGCTGGCTGGGCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSFVSSY*LAGLGV
Trigger: TACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAA...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGTAGGCGGGCGTGAATaGGAGGGTTCTTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWVGGRE*EGSSPS
Trigger: AGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTAC...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAATGTACTGCTTTTCACTaGCGCCCTCCAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKCTAFH*RPPGWA
Trigger: TGCCCAGCCTGGAGGGCGTCAGTGAAAAGCAGTACA...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACACATGAGTTCTGAATaGAGTGACCGAGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTHMSSE*SDRGET
Trigger: TGTTTCCCCTCGGTCACTGCATTCAGAACTCATGTG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCACATGAGTTCTGAATaGAGTGACCGAGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGHMSSE*SDRGET
Trigger: TGTTTCCCCTCGGTCACTGCATTCAGAACTCATGTG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCGTAGCCCCTCCTCAATaGTGGAGCTCAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGVAPPQ*WSSMPA
Trigger: AGCAGGCATTGAGCTCCAGCATTGAGGAGGGGCTAC...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAATGTGCATGGCCTGCATaGGTAGCCCCTCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKCAWPA*VAPPQC
Trigger: GCATTGAGGAGGGGCTACGCATGCAGGCCATGCACA...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGGATGGGGGCGTGTTTTaGCCCACTCTGTACAATATA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGDGGVF*PTLYNI
Trigger: TATATTGTACAGAGTGGGGCAAAACACGCCCCCATC...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGTTTTGCTGGCATTCTaGGCATTCGCCGGCGTCGTC +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKVLLAF*AFAGVV
Trigger: GACGACGCCGGCGAATGCCCAGAATGCCAGCAAAAC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCGTTCCCACGTTTTGCTaGCATTCTGGGCATTCGCCG +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGVPTFC*HSGHSP
Trigger: CGGCGAATGCCCAGAATGCCAGCAAAACGTGGGAAC...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACTGTGCCATCCATTATaGCTTCCTGCGGGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKLCHPL*LPAGSG
Trigger: ACCGGACCCCGCAGGAAGCCATAATGGATGGCACAG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGTGTGGAGGCACTCCTTaGTGGTCATCGTATTCTTCA +
Preference number: 4 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGCGGTP*WSSYSS
Trigger: TGAAGAATACGATGACCACCAAGGAGTGCCTCCACA...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACATGTGGAGGCACTCCTTaGTGGTCATCGTATTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTCGGTP*WSSYSS
Trigger: TGAAGAATACGATGACCACCAAGGAGTGCCTCCACA...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGCCCCTCCTCAATGCTaGAGCTCAATGCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKAPPQC*SSMPAG
Trigger: ACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATTCACATACCTCGTCTaGCAGTATTCTCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQFTYLV*QYSPFS
Trigger: GGAGAAGGGAGAATACTGCCAGACGAGGTATGTGAA...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACATTCACATACCTCGTCTaGCAGTATTCTCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTFTYLV*QYSPFS
Trigger: GGAGAAGGGAGAATACTGCCAGACGAGGTATGTGAA...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGCAGGGCCAAGTACTTaGAGAGGTGGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKAGPST*RGGPLW
Trigger: CCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCACTTTGGATCCTTGGTaGGAGCATAGCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSTLDPW*EHSTAP
Trigger: TGGAGCTGTGCTATGCTCCCACCAAGGATCCAAAGT...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGTCACTTTGGATCCTTaGTGGGAGCATAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSVTLDP*WEHSTA
Trigger: AGCTGTGCTATGCTCCCACCAAGGATCCAAAGTGAC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCGGGGGACAAAGAAGCTaGGGTGATAGACCAGGACAC +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGGGQRS*GDRPGH
Trigger: GTGTCCTGGTCTATCACCCCAGCTTCTTTGTCCCCC...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAATGTCCTCTTATTGGCTaGCTGGGCTGGGGGTACTGG +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKCPLIG*LGWGYW
Trigger: CCAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACA...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGTTTGTGTCCTCTTATTaGCTGGCTGGGCTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWFVSSY*LAGLGV
Trigger: TACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAA...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCATAAGCACTCGGTCTTaGTGGGCCTCGTATTCCTCC +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGISTRS*WASYSS
Trigger: GGAGGAATACGAGGCCCATCAAGACCGAGTGCTTAT...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR TCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACTCATCGTTGTGGTCTaGTCTGACCCTGGTATCGGC +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKLIVVV*SDPGIG
Trigger: GCCGATACCAGGGTCAGATCAGACCACAACGATGAG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGTCAGTTCCCACGTTTTaGTGGCATTCTGGGCATTCG +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWSVPTF*WHSGHS
Trigger: CGAATGCCCAGAATGCCAGCAAAACGTGGGAACTGA...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTAAACAGCAATCTCTGTaGCATCCATTATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRKQQSL*HPLWLP
Trigger: AGGAAGCCATAATGGATGGCACAGAGATTGCTGTTT...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGATGGGGGCGTGTTTTaGCCCACTCTGTACAATATA +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSDGGVF*PTLYNI
Trigger: TATATTGTACAGAGTGGGGCAAAACACGCCCCCATC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTCAGAGCAGAATCTGTaGAGGCACTCCTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGSEQNL*RHSLVV
Trigger: GACCACCAAGGAGTGCCTCCACAGATTCTGCTCTGA...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCCCCCACTCATCGTTGTaGTCTGATCTGACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGPHSSL*SDLTLV
Trigger: TACCAGGGTCAGATCAGACCACAACGATGAGTGGGG...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGAAGTACTTGGAGAGGTaGTCCACTGTGGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWKYLER*STVAFP
Trigger: TGGGAATGCCACAGTGGACCACCTCTCCAAGTACTT...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAATAGCACAGCTCCAGTaGCCGGGACACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKIAQLQ*PGHLPE
Trigger: TTCTGGAAGGTGTCCCGGCCACTGGAGCTGTGCTAT...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGGGGACAAAGAAGCTaGGGTGATAGACCAGGACAC +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKGGQRS*GDRPGH
Trigger: GTGTCCTGGTCTATCACCCCAGCTTCTTTGTCCCCC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAAAACAGCAATCTCTGTaGCATCCATTATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTKQQSL*HPLWLP
Trigger: AGGAAGCCATAATGGATGGCACAGAGATTGCTGTTT...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAAAACAGCAATCTCTGTaGCATCCATTATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQKQQSL*HPLWLP
Trigger: AGGAAGCCATAATGGATGGCACAGAGATTGCTGTTT...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGTGTGGAGGCACTCCTTaGTGGTCATCGTATTCTTCA +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWCGGTP*WSSYSS
Trigger: TGAAGAATACGATGACCACCAAGGAGTGCCTCCACA...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACCCCACTCATCGTTGTaGTCTGATCTGACCCTGGTA +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKPHSSL*SDLTLV
Trigger: TACCAGGGTCAGATCAGACCACAACGATGAGTGGGG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGTTCACATACCTCGTCTaGCAGTATTCTCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWFTYLV*QYSPFS
Trigger: GGAGAAGGGAGAATACTGCCAGACGAGGTATGTGAA...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCAGAGGTGGTCCACTGTaGCATTCCCAGTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGRGGPL*HSQLSS
Trigger: TGAAGACAACTGGGAATGCCACAGTGGACCACCTCT...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCAAGTACTTGGAGAGGTaGTCCACTGTGGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGKYLER*STVAFP
Trigger: TGGGAATGCCACAGTGGACCACCTCTCCAAGTACTT...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCACTTTGGATCCTTGGTaGGAGCATAGCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGTLDPW*EHSTAP
Trigger: TGGAGCTGTGCTATGCTCCCACCAAGGATCCAAAGT...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCGTCACTTTGGATCCTTaGTGGGAGCATAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGVTLDP*WEHSTA
Trigger: AGCTGTGCTATGCTCCCACCAAGGATCCAAAGTGAC...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAAACAGCAATCTCTGTaGCATCCATTATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSKQQSL*HPLWLP
Trigger: AGGAAGCCATAATGGATGGCACAGAGATTGCTGTTT...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCCACATGAGTTCTGAATaGAGTGACCGAGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGHMSSE*SDRGET
Trigger: TGTTTCCCCTCGGTCACTGCATTCAGAACTCATGTG...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGAGGCACTCCTTGGTaGTCATCGTATTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKGGTPW*SSYSSA
Trigger: TGCTGAAGAATACGATGACCACCAAGGAGTGCCTCC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAAGAGGTGGTCCACTGTaGCATTCCCAGTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKRGGPL*HSQLSS
Trigger: TGAAGACAACTGGGAATGCCACAGTGGACCACCTCT...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAACTTTGGATCCTTGGTaGGAGCATAGCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKTLDPW*EHSTAP
Trigger: TGGAGCTGTGCTATGCTCCCACCAAGGATCCAAAGT...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACACATGAGTTCTGAATaGAGTGACCGAGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKHMSSE*SDRGET
Trigger: TGTTTCCCCTCGGTCACTGCATTCAGAACTCATGTG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGATGGGGGCGTGTTTTaGCCCACTCTGTACAATATA +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKDGGVF*PTLYNI
Trigger: TATATTGTACAGAGTGGGGCAAAACACGCCCCCATC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR GCA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAAAACAGCAATCTCTGTaGCATCCATTATGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKKQQSL*HPLWLP
Trigger: AGGAAGCCATAATGGATGGCACAGAGATTGCTGTTT...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS CCA 90 bp CCCATCAGGTCCTCCGGTGTCAGAGGCGCCCCCTCCAGGCCCTCCTaGCTCCCCTGCTTCCTGCTGTTGCCTCCGCTCGAGGGCAATGCG +
Preference number: 5 (lower is better)
Translates to: PIRSSGVRGAPSRPS*LPCFLLLPPLEGNA
Trigger: CGCATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGGGGAGCCAGGAGGGCCTGGAGGGGGCGCCTCTGACACCGGAGGACCTGATGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS GCA 90 bp CACGCTGGGCCCTGTGCATGGCCTGCATGCGTAGCCCCTCCTCAATaGTGGAGCTCAATGCCTGCTGGTTGTGCAGGCGGCTCAGGCGGA +
Preference number: 5 (lower is better)
Translates to: HAGPCAWPACVAPPQ*WSSMPAGCAGGSGG
Trigger: TCCGCCTGAGCCGCCTGCACAACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGCTACGCATGCAGGCCATGCACAGGGCCCAGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS-3UTR CAA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCCTCCACGGGGTCGCTaGGGAGCAGGGCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLPPRGR*GAGPGA
Trigger: TGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGAGG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS GCA 90 bp CTCCTGGCTCCCCTGCTTCCTGCTGTTGCCTCCGCTCGAGGGCAATaGGCAGGGCCAAGTACTTGGAGAGGTGGTCCACTGTGGCATTCC +
Preference number: 5 (lower is better)
Translates to: LLAPLLPAVASARGQ*AGPSTWRGGPLWHS
Trigger: GGAATGCCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCGCATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGGGGAGCCAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS-3UTR CAA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCCTCCACGGGGTCGCTaGGGAGCAGGGCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGPPRGR*GAGPGA
Trigger: TGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGAGG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACCTCCACGGGGTCGCTaGGGAGCAGGGCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTPPRGR*GAGPGA
Trigger: TGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGAGG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCTCCACGGGGTCGCTaGGGAGCAGGGCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGPPRGR*GAGPGA
Trigger: TGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGAGG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS CCA 90 bp CCCTTCCTCTGGCTGTCCCCTGGTGGGGTCACTTTGGATCCTTGGTaGGAGCATAGCACAGCTCCAGTGGCCGGGACACCTTCCAGAATT +
Preference number: 5 (lower is better)
Translates to: PFLWLSPGGVTLDPW*EHSTAPVAGTPSRI
Trigger: AATTCTGGAAGGTGTCCCGGCCACTGGAGCTGTGCTATGCTCCCACCAAGGATCCAAAGTGACCCCACCAGGGGACAGCCAGAGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS-3UTR CAA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCTCAATGCCTGCTGGTaGTGCAGGCGGCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGLNACW*CRRLRR
Trigger: CCGCCTGAGCCGCCTGCACAACCAGCAGGCATTGAG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCCCTGCTTCCTGCTGTaGCCTCCGCTCGAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLPCFLL*PPLEGN
Trigger: ATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGGG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS CCA 90 bp TGCCTCCGCTCGAGGGCAATGCGCAGGGCCAAGTACTTGGAGAGGTaGTCCACTGTGGCATTCCCAGTTGTCTTCACATACCTCGTCTGG +
Preference number: 5 (lower is better)
Translates to: CLRSRAMRRAKYLER*STVAFPVVFTYLVW
Trigger: CCAGACGAGGTATGTGAAGACAACTGGGAATGCCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCGCATTGCCCTCGAGCGGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CCA 90 bp CCTGCTGTTGCCTCCGCTCGAGGGCAATGCGCAGGGCCAAGTACTTaGAGAGGTGGTCCACTGTGGCATTCCCAGTTGTCTTCACATACC +
Preference number: 5 (lower is better)
Translates to: PAVASARGQCAGPST*RGGPLWHSQLSSHT
Trigger: GGTATGTGAAGACAACTGGGAATGCCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCGCATTGCCCTCGAGCGGAGGCAACAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS-3UTR CAA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCAGGTAGGACACTCCTaGTTCCCGCTCCGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLQVGHS*FPLRRA
Trigger: AGCCCTACGGAGCGGGAACAAGGAGTGTCCTACCTG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAACTCAATGCCTGCTGGTaGTGCAGGCGGCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQLNACW*CRRLRR
Trigger: CCGCCTGAGCCGCCTGCACAACCAGCAGGCATTGAG...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACTCAATGCCTGCTGGTaGTGCAGGCGGCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTLNACW*CRRLRR
Trigger: CCGCCTGAGCCGCCTGCACAACCAGCAGGCATTGAG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGGCCGTAGGGATCGCTaGGACACCAGCTTCTTTCGG +
Preference number: 5 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRGRRDR*DTSFFR
Trigger: CCGAAAGAAGCTGGTGTCCAAGCGATCCCTACGGCC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACCTCCACGGGGTCGCTaGGGAGCAGGGCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKPPRGR*GAGPGA
Trigger: TGCCCCAGGCCCTGCTCCCAAGCGACCCCGTGGAGG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTCGCAGGGCCAAGTACTaGGAGAGGTGGTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRRRAKY*ERWSTV
Trigger: CACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCG...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAACCCTGCTTCCTGCTGTaGCCTCCGCTCGAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQPCFLL*PPLEGN
Trigger: ATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGGG...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCCTGCTTCCTGCTGTaGCCTCCGCTCGAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGPCFLL*PPLEGN
Trigger: ATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGGG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCCTGGTGGGGTCACTTaGGATCCTTGGTGGGAGCAT +
Preference number: 5 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLPGGVT*DPWWEH
Trigger: ATGCTCCCACCAAGGATCCAAAGTGACCCCACCAGG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAGGTAGGACACTCCTaGTTCCCGCTCCGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGQVGHS*FPLRRA
Trigger: AGCCCTACGGAGCGGGAACAAGGAGTGTCCTACCTG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAGGCCGTAGGGATCGCTaGGACACCAGCTTCTTTCGG +
Preference number: 5 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTGRRDR*DTSFFR
Trigger: CCGAAAGAAGCTGGTGTCCAAGCGATCCCTACGGCC...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGATCAGGGCATCAAAGTaGGGGTCTGGCCGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLIRASK*GSGRRD
Trigger: ATCCCTACGGCCAGACCCCAACTTTGATGCCCTGAT...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCCTGGTGGGGTCACTTaGGATCCTTGGTGGGAGCAT +
Preference number: 5 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGPGGVT*DPWWEH
Trigger: ATGCTCCCACCAAGGATCCAAAGTGACCCCACCAGG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCTCAGTTCCCACGTTTaGCTGGCATTCTGGGCATTC +
Preference number: 5 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLLSSHV*LAFWAF
Trigger: GAATGCCCAGAATGCCAGCAAAACGTGGGAACTGAG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCGGCCGTAGGGATCGCTaGGACACCAGCTTCTTTCGG +
Preference number: 5 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSGRRDR*DTSFFR
Trigger: CCGAAAGAAGCTGGTGTCCAAGCGATCCCTACGGCC...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCATCAGGGCATCAAAGTaGGGGTCTGGCCGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGIRASK*GSGRRD
Trigger: ATCCCTACGGCCAGACCCCAACTTTGATGCCCTGAT...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGATAAGCACTCGGTCTaGATGGGCCTCGTATTCCTC +
Preference number: 5 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLDKHSV*MGLVFL
Trigger: GAGGAATACGAGGCCCATCAAGACCGAGTGCTTATC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCCTCAATGCCTGCTGGTaGTGCAGGCGGCTCAGGCGG +
Preference number: 5 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGLNACW*CRRLRR
Trigger: CCGCCTGAGCCGCCTGCACAACCAGCAGGCATTGAG...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCCGCAGGGCCAAGTACTaGGAGAGGTGGTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSRRAKY*ERWSTV
Trigger: CACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCG...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCCCTGCTTCCTGCTGTaGCCTCCGCTCGAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWPCFLL*PPLEGN
Trigger: ATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGGG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACCTGGTGGGGTCACTTaGGATCCTTGGTGGGAGCAT +
Preference number: 5 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTPGGVT*DPWWEH
Trigger: ATGCTCCCACCAAGGATCCAAAGTGACCCCACCAGG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGGCCACGTGTCCTCATTaGTGTCCTCTTATTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLATCPH*CPLIGW
Trigger: CCAGCCAATAAGAGGACACAAATGAGGACACGTGGC...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS CCA 90 bp TTCCCGCTCCGTAGGGCTGTGACAATGCAGTCAGAGCAGAATCTGTaGAGGCACTCCTTGGTGGTCATCGTATTCTTCAGCATGTCCAGG +
Preference number: 5 (lower is better)
Translates to: FPLRRAVTMQSEQNL*RHSLVVIVFFSMSR
Trigger: CCTGGACATGCTGAAGAATACGATGACCACCAAGGAGTGCCTCCACAGATTCTGCTCTGACTGCATTGTCACAGCCCTACGGAGCGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS-3UTR CAA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCAGGTAGGACACTCCTaGTTCCCGCTCCGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWQVGHS*FPLRRA
Trigger: AGCCCTACGGAGCGGGAACAAGGAGTGTCCTACCTG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGATCAGGGCATCAAAGTaGGGGTCTGGCCGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGIRASK*GSGRRD
Trigger: ATCCCTACGGCCAGACCCCAACTTTGATGCCCTGAT...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAATCAGGGCATCAAAGTaGGGGTCTGGCCGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQIRASK*GSGRRD
Trigger: ATCCCTACGGCCAGACCCCAACTTTGATGCCCTGAT...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCGATAAGCACTCGGTCTaGATGGGCCTCGTATTCCTC +
Preference number: 5 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGDKHSV*MGLVFL
Trigger: GAGGAATACGAGGCCCATCAAGACCGAGTGCTTATC...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGATAAGCACTCGGTCTaGATGGGCCTCGTATTCCTC +
Preference number: 5 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRDKHSV*MGLVFL
Trigger: GAGGAATACGAGGCCCATCAAGACCGAGTGCTTATC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCCCTGGTGGGGTCACTTaGGATCCTTGGTGGGAGCAT +
Preference number: 5 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSPGGVT*DPWWEH
Trigger: ATGCTCCCACCAAGGATCCAAAGTGACCCCACCAGG...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAATTTGTGTCCTCTTATaGGCTGGCTGGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTICVLL*AGWAGG
Trigger: ACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAAT...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGCCACGTGTCCTCATTaGTGTCCTCTTATTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRATCPH*CPLIGW
Trigger: CCAGCCAATAAGAGGACACAAATGAGGACACGTGGC...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGAGATGGGGGCGTGTTTaGCCCCACTCTGTACAATAT +
Preference number: 5 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLRWGRV*PHSVQY
Trigger: ATATTGTACAGAGTGGGGCAAAACACGCCCCCATCT...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp AGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGGGTACTGCGTATAGATGGGACGTaGCAGGGCAATAGAAAAGGC +
Preference number: 5 (lower is better)
Translates to: SHVSSFVSSYWLAGLGVLRIDGT*QGNRKG
Trigger: GCCTTTTCTATTGCCCTGCAACGTCCCATCTATACG...CAGTACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAAAGCACGTTTGTTGTaGGTAGGCGGGCGTGAATGG +
Preference number: 5 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGKARLL*VGGREW
Trigger: CCATTCACGCCCGCCTACCAACAACAAACGTGCTTT...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACACTCAGTTCCCACGTTTaGCTGGCATTCTGGGCATTC +
Preference number: 5 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTLSSHV*LAFWAF
Trigger: GAATGCCCAGAATGCCAGCAAAACGTGGGAACTGAG...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTCAGTTCCCACGTTTaGCTGGCATTCTGGGCATTC +
Preference number: 5 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGLSSHV*LAFWAF
Trigger: GAATGCCCAGAATGCCAGCAAAACGTGGGAACTGAG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTGTGGAGGCACTCCTaGGTGGTCATCGTATTCTTC +
Preference number: 5 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGLWRHS*VVIVFF
Trigger: GAAGAATACGATGACCACCAAGGAGTGCCTCCACAG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCGGCCGTAGGGATCGCTaGGACACCAGCTTCTTTCGG +
Preference number: 5 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGGRRDR*DTSFFR
Trigger: CCGAAAGAAGCTGGTGTCCAAGCGATCCCTACGGCC...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAGATAAGCACTCGGTCTaGATGGGCCTCGTATTCCTC +
Preference number: 5 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTDKHSV*MGLVFL
Trigger: GAGGAATACGAGGCCCATCAAGACCGAGTGCTTATC...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGGATAAGCACTCGGTCTaGATGGGCCTCGTATTCCTC +
Preference number: 5 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGDKHSV*MGLVFL
Trigger: GAGGAATACGAGGCCCATCAAGACCGAGTGCTTATC...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCCTGTGGCATTCCCAGTaGTCTTCACATACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: WEGSSPSPTPRIDGTLQGLWHSQ*SSHTSS
Trigger: AGACGAGGTATGTGAAGACAACTGGGAATGCCACAG...GCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCCGCAGGGCCAAGTACTaGGAGAGGTGGTCCACTGTG +
Preference number: 5 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGRRAKY*ERWSTV
Trigger: CACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCG...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACCCTGCTTCCTGCTGTaGCCTCCGCTCGAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKPCFLL*PPLEGN
Trigger: ATTGCCCTCGAGCGGAGGCAACAGCAGGAAGCAGGG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCCTGGTGGGGTCACTTaGGATCCTTGGTGGGAGCAT +
Preference number: 5 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWPGGVT*DPWWEH
Trigger: ATGCTCCCACCAAGGATCCAAAGTGACCCCACCAGG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCATTTGTGTCCTCTTATaGGCTGGCTGGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSICVLL*AGWAGG
Trigger: ACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAAT...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGGCCACGTGTCCTCATTaGTGTCCTCTTATTGGCTGG +
Preference number: 5 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGATCPH*CPLIGW
Trigger: CCAGCCAATAAGAGGACACAAATGAGGACACGTGGC...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAGCCACGTGTCCTCATTaGTGTCCTCTTATTGGCTGG +
Preference number: 5 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTATCPH*CPLIGW
Trigger: CCAGCCAATAAGAGGACACAAATGAGGACACGTGGC...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTCGTATAGATGGGACGTaGCAGGGCAATAGAAAAGGC +
Preference number: 5 (lower is better)
Translates to: PRIDGTLQGNRKGSRWGRRIDGT*QGNRKG
Trigger: GCCTTTTCTATTGCCCTGCAACGTCCCATCTATACG...ACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CGTTTGTTGTTGGTAGGCGGGCGTGAATGGGAGGGTTCTTCACCTTCTCCAACAAAAGCACGTTTGTTGTaGGTAGGCGGGCGTGAATGG +
Preference number: 5 (lower is better)
Translates to: RLLLVGGREWEGSSPSPTKARLL*VGGREW
Trigger: CCATTCACGCCCGCCTACCAACAACAAACGTGCTTT...TGTTGGAGAAGGTGAAGAACCCTCCCATTCACGCCCGCCTACCAACAACAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGAAAGCACGTTTGTTGTaGGTAGGCGGGCGTGAATGG +
Preference number: 5 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGKARLL*VGGREW
Trigger: CCATTCACGCCCGCCTACCAACAACAAACGTGCTTT...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACAGGTAGGACACTCCTaGTTCCCGCTCCGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKQVGHS*FPLRRA
Trigger: AGCCCTACGGAGCGGGAACAAGGAGTGTCCTACCTG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGATCAGGGCATCAAAGTaGGGGTCTGGCCGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWIRASK*GSGRRD
Trigger: ATCCCTACGGCCAGACCCCAACTTTGATGCCCTGAT...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp ATGGGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCTGTGGCATTCCCAGTaGTCTTCACATACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: MGGFFTFSNTSYRWDVAGLWHSQ*SSHTSS
Trigger: AGACGAGGTATGTGAAGACAACTGGGAATGCCACAG...CCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAACTGTGGCATTCCCAGTaGTCTTCACATACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQLWHSQ*SSHTSS
Trigger: AGACGAGGTATGTGAAGACAACTGGGAATGCCACAG...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp GGAGGGTTCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAACGTATAGATGGGACGTaGCAGGGCAATAGAAAAGGC +
Preference number: 5 (lower is better)
Translates to: GGFFTFSNTSYRWDVAGQRIDGT*QGNRKG
Trigger: GCCTTTTCTATTGCCCTGCAACGTCCCATCTATACG...TTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGAACCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGCTGTGGAGGCACTCCTaGGTGGTCATCGTATTCTTC +
Preference number: 5 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWLWRHS*VVIVFF
Trigger: GAAGAATACGATGACCACCAAGGAGTGCCTCCACAG...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCCTGTGGCATTCCCAGTaGTCTTCACATACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSLWHSQ*SSHTSS
Trigger: AGACGAGGTATGTGAAGACAACTGGGAATGCCACAG...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCATTTGTGTCCTCTTATaGGCTGGCTGGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGICVLL*AGWAGG
Trigger: ACCCCCAGCCCAGCCAGCCAATAAGAGGACACAAAT...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCTGGGCCACGTGTCCTCATTaGTGTCCTCTTATTGGCTGG +
Preference number: 5 (lower is better)
Translates to: CIKATCPHLCPLIGWLGWATCPH*CPLIGW
Trigger: CCAGCCAATAAGAGGACACAAATGAGGACACGTGGC...CCAGCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGGCAGCAGATGGGGGCGTGTTTaGCCCCACTCTGTACAATAT +
Preference number: 5 (lower is better)
Translates to: PSPTPRIDGTLQGNRKGSRWGRV*PHSVQY
Trigger: ATATTGTACAGAGTGGGGCAAAACACGCCCCCATCT...GCTGCCTTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCAAAGCACGTTTGTTGTaGGTAGGCGGGCGTGAATGG +
Preference number: 5 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGKARLL*VGGREW
Trigger: CCATTCACGCCCGCCTACCAACAACAAACGTGCTTT...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAAGATAAGCACTCGGTCTaGATGGGCCTCGTATTCCTC +
Preference number: 5 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKDKHSV*MGLVFL
Trigger: GAGGAATACGAGGCCCATCAAGACCGAGTGCTTATC...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp CTTTGTATAAAAGCCACGTGTCCTCATTTGTGTCCTCTTATTGGCTGGCTGGGCCTGTGGCATTCCCAGTaGTCTTCACATACCTCGTCT +
Preference number: 5 (lower is better)
Translates to: LCIKATCPHLCPLIGWLGLWHSQ*SSHTSS
Trigger: AGACGAGGTATGTGAAGACAACTGGGAATGCCACAG...GCCCAGCCAGCCAATAAGAGGACACAAATGAGGACACGTGGCTTTTATACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS-3UTR CAA 90 bp TCTTCACCTTCTCCAACACCTCGTATAGATGGGACGTTGCAGGGCAATAGAAAACGTATAGATGGGACGTaGCAGGGCAATAGAAAAGGC +
Preference number: 5 (lower is better)
Translates to: SSPSPTPRIDGTLQGNRKRIDGT*QGNRKG
Trigger: GCCTTTTCTATTGCCCTGCAACGTCCCATCTATACG...TTTTCTATTGCCCTGCAACGTCCCATCTATACGAGGTGTTGGAGAAGGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS GCA 72 bp CCCTGTGCATGGCCTGCATGCGTAGCCCCTCCTCAATaGTGGAGCTCAATGCCTGCTGGTTGTGCAGGCGGC +
Preference number: 6 (lower is better)
Translates to: PCAWPACVAPPQ*WSSMPAGCAGG
Trigger: GCCGCCTGCACAACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGCTACGCATGCAGGCCATGCACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CCA 72 bp CGTAGCCCCTCCTCAATGCTGGAGCTCAATGCCTGCTaGTTGTGCAGGCGGCTCAGGCGGATAAGCACTCGG +
Preference number: 6 (lower is better)
Translates to: RSPSSMLELNAC*LCRRLRRISTR
Trigger: CCGAGTGCTTATCCGCCTGAGCCGCCTGCACAACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGCTACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CCA 72 bp TGGCTGTCCCCTGGTGGGGTCACTTTGGATCCTTGGTaGGAGCATAGCACAGCTCCAGTGGCCGGGACACCT +
Preference number: 6 (lower is better)
Translates to: WLSPGGVTLDPW*EHSTAPVAGTP
Trigger: AGGTGTCCCGGCCACTGGAGCTGTGCTATGCTCCCACCAAGGATCCAAAGTGACCCCACCAGGGGACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CCA 72 bp GTCTGGCAGTATTCTCCCTTCTCCACGAGCAGGGGGTaGGGCCGGAACACGAGCTCAATTTCTCCACCTGGC +
Preference number: 6 (lower is better)
Translates to: VWQYSPFSTSRG*GRNTSSISPPG
Trigger: GCCAGGTGGAGAAATTGAGCTCGTGTTCCGGCCCCACCCCCTGCTCGTGGAGAAGGGAGAATACTGCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CCA 72 bp GCCTCCGCTCGAGGGCAATGCGCAGGGCCAAGTACTTaGAGAGGTGGTCCACTGTGGCATTCCCAGTTGTCT +
Preference number: 6 (lower is better)
Translates to: ASARGQCAGPST*RGGPLWHSQLS
Trigger: AGACAACTGGGAATGCCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCGCATTGCCCTCGAGCGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CAA 72 bp AGCCCCTCCTCAATGCTGGAGCTCAATGCCTGCTGGTaGTGCAGGCGGCTCAGGCGGATAAGCACTCGGTCT +
Preference number: 6 (lower is better)
Translates to: SPSSMLELNACW*CRRLRRISTRS
Trigger: AGACCGAGTGCTTATCCGCCTGAGCCGCCTGCACAACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS GCA 72 bp ATGCGTAGCCCCTCCTCAATGCTGGAGCTCAATGCCTaGTGGTTGTGCAGGCGGCTCAGGCGGATAAGCACT +
Preference number: 6 (lower is better)
Translates to: MRSPSSMLELNA*WLCRRLRRIST
Trigger: AGTGCTTATCCGCCTGAGCCGCCTGCACAACCAGCAGGCATTGAGCTCCAGCATTGAGGAGGGGCTACGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CCA 72 bp TCATACAGACTCAGTTCCCACGTTTTGCTGGCATTCTaGGCATTCGCCGGCGTCGTCATGGTGACCGGGCGC +
Preference number: 6 (lower is better)
Translates to: SYRLSSHVLLAF*AFAGVVMVTGR
Trigger: GCGCCCGGTCACCATGACGACGCCGGCGAATGCCCAGAATGCCAGCAAAACGTGGGAACTGAGTCTGTATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS CAA 90 bp TCCTGCTGTTGCCTCCGCTCGAGGGCAATGCGCAGGGCCAAGTACTaGGAGAGGTGGTCCACTGTGGCATTCCCAGTTGTCTTCACATAC +
Preference number: 6 (lower is better)
Translates to: SCCCLRSRAMRRAKY*ERWSTVAFPVVFTY
Trigger: GTATGTGAAGACAACTGGGAATGCCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCGCATTGCCCTCGAGCGGAGGCAACAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS GCA 72 bp CGAGCCATTCAACGTCGTGAACGCCCCGCCTCCAGGTaGGATGTAGATGGTGTACTGCTTTTCACTGACGCC +
Preference number: 6 (lower is better)
Translates to: RAIQRRERPASR*DVDGVLLFTDA
Trigger: GGCGTCAGTGAAAAGCAGTACACCATCTACATCGCACCTGGAGGCGGGGCGTTCACGACGTTGAATGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CAA 72 bp GTTGTGCAGGCGGCTCAGGCGGATAAGCACTCGGTCTaGATGGGCCTCGTATTCCTCCCGGCTAGGATAGAT +
Preference number: 6 (lower is better)
Translates to: VVQAAQADKHSV*MGLVFLPARID
Trigger: ATCTATCCTAGCCGGGAGGAATACGAGGCCCATCAAGACCGAGTGCTTATCCGCCTGAGCCGCCTGCACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CAA 90 bp TGCCTGCTGGTTGTGCAGGCGGCTCAGGCGGATAAGCACTCGGTCTaGATGGGCCTCGTATTCCTCCCGGCTAGGATAGATCTTAGAGAT +
Preference number: 6 (lower is better)
Translates to: CLLVVQAAQADKHSV*MGLVFLPARIDLRD
Trigger: ATCTCTAAGATCTATCCTAGCCGGGAGGAATACGAGGCCCATCAAGACCGAGTGCTTATCCGCCTGAGCCGCCTGCACAACCAGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS GCA 72 bp CTGAATGCAGTGACCGAGGGGAAACAGCAATCTCTGTaGCATCCATTATGGCTTCCTGCGGGGTCCGGTGCA +
Preference number: 6 (lower is better)
Translates to: LNAVTEGKQQSL*HPLWLPAGSGA
Trigger: TGCACCGGACCCCGCAGGAAGCCATAATGGATGGCACAGAGATTGCTGTTTCCCCTCGGTCACTGCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
CDS CCA 72 bp TGCGCAGGGCCAAGTACTTGGAGAGGTGGTCCACTGTaGCATTCCCAGTTGTCTTCACATACCTCGTCTGGC +
Preference number: 6 (lower is better)
Translates to: CAGPSTWRGGPL*HSQLSSHTSSG
Trigger: GCCAGACGAGGTATGTGAAGACAACTGGGAATGCCACAGTGGACCACCTCTCCAAGTACTTGGCCCTGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CCA 72 bp CTTTGGATCCTTGGTGGGAGCATAGCACAGCTCCAGTaGCCGGGACACCTTCCAGAATTTCTCATTCACCAG +
Preference number: 6 (lower is better)
Translates to: LWILGGSIAQLQ*PGHLPEFLIHQ
Trigger: CTGGTGAATGAGAAATTCTGGAAGGTGTCCCGGCCACTGGAGCTGTGCTATGCTCCCACCAAGGATCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS GCA 72 bp AGCATGTCCAGGCAGATAGGGCACATGAGTTCTGAATaGAGTGACCGAGGGGAAACAGCAATCTCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: SMSRQIGHMSSE*SDRGETAISVP
Trigger: TGGCACAGAGATTGCTGTTTCCCCTCGGTCACTGCATTCAGAACTCATGTGCCCTATCTGCCTGGACATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CCA 72 bp CGTAGGGCTGTGACAATGCAGTCAGAGCAGAATCTGTaGAGGCACTCCTTGGTGGTCATCGTATTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: RRAVTMQSEQNL*RHSLVVIVFFS
Trigger: GCTGAAGAATACGATGACCACCAAGGAGTGCCTCCACAGATTCTGCTCTGACTGCATTGTCACAGCCCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS GCA 72 bp CTGAATGCAGTGACCGAGGGGAAACAGCAATCTCTGTaGCATCCATTATGGCTTCCTGAAGGCATCAGTGAG +
Preference number: 6 (lower is better)
Translates to: LNAVTEGKQQSL*HPLWLPEGISE
Trigger: CTCACTGATGCCTTCAGGAAGCCATAATGGATGGCACAGAGATTGCTGTTTCCCCTCGGTCACTGCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CCA 72 bp CAATGCAGTCAGAGCAGAATCTGTGGAGGCACTCCTTaGTGGTCATCGTATTCTTCAGCATGTCCAGGCAGA +
Preference number: 6 (lower is better)
Translates to: QCSQSRICGGTP*WSSYSSACPGR
Trigger: TCTGCCTGGACATGCTGAAGAATACGATGACCACCAAGGAGTGCCTCCACAGATTCTGCTCTGACTGCATTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CCA 72 bp GGCTTCCTGAAGGCATCAGTGAGTAGAAAGGTGGTGTaGGTTAGAGGGAAAGGGGTTTTAGAAACAGCAGCC +
Preference number: 6 (lower is better)
Translates to: GFLKASVSRKVV*VRGKGVLETAA
Trigger: GGCTGCTGTTTCTAAAACCCCTTTCCCTCTAACCCACACCACCTTTCTACTCACTGATGCCTTCAGGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1
CDS CAA 72 bp ACAATGCAGTCAGAGCAGAATCTGTGGAGGCACTCCTaGGTGGTCATCGTATTCTTCAGCATGTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: TMQSEQNLWRHS*VVIVFFSMSRQ
Trigger: CTGCCTGGACATGCTGAAGAATACGATGACCACCAAGGAGTGCCTCCACAGATTCTGCTCTGACTGCATTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000374656.5
ENST00000383212.4
ENST00000415941.2
ENST00000427374.2
ENST00000430233.2
ENST00000436128.2
ENST00000472412.1
ENST00000478431.1
ENST00000479405.1
ENST00000482708.1
ENST00000484884.1
ENST00000498835.1