RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RHOU (Homo sapiens)

Ensembl gene IDs: ENSG00000116574

Ensembl transcript IDs: ENST00000366691.4, ENST00000646945.2

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACTTTGGTGGCTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTaGGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCA +
Preference number: 1 (lower is better)
Translates to: TLVALGHPPQARPCN*VFRLPCGVSEAFLP
Trigger: TGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAGCCACCAAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CCA 90 bp AGAACTGGGCCACACAGGTGTACTTCACTGAGCACTTTCCACCCATaGCCTAAAGGCAGGAGGTGTGGAAGTCCCCTCCAGGGAGACCAA +
Preference number: 1 (lower is better)
Translates to: RTGPHRCTSLSTFHP*PKGRRCGSPLQGDQ
Trigger: TTGGTCTCCCTGGAGGGGACTTCCACACCTCCTGCCTTTAGGCCATGGGTGGAAAGTGCTCAGTGAAGTACACCTGTGTGGCCCAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CCA 90 bp CCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTaGTGTCTCGGAAGCATTCCTACCAGAGTAAAAGCTATTCTCCTG +
Preference number: 1 (lower is better)
Translates to: PTASPTLQLSVQAAL*CLGSIPTRVKAILL
Trigger: CAGGAGAATAGCTTTTACTCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR TCA 90 bp CCCTCAGGAGTCCTCAGAGTCCACTGGCCTCTGCTGCTACTGCCCTaGAAGCCATCTGTGGCTTTAACTGGTTGTTTTAACAGGTTTCAA +
Preference number: 1 (lower is better)
Translates to: PSGVLRVHWPLLLLP*KPSVALTGCFNRFQ
Trigger: TTGAAACCTGTTAAAACAACCAGTTAAAGCCACAGATGGCTTTCAGGGCAGTAGCAGCAGAGGCCAGTGGACTCTGAGGACTCCTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR TCA 90 bp AACTGTATAAAGCTTTCAGAACTGGGCCACACAGGTGTACTTCACTaGGCACTTTCCACCCATGGCCTAAAGGCAGGAGGTGTGGAAGTC +
Preference number: 1 (lower is better)
Translates to: NCIKLSELGHTGVLH*ALSTHGLKAGGVEV
Trigger: GACTTCCACACCTCCTGCCTTTAGGCCATGGGTGGAAAGTGCTCAGTGAAGTACACCTGTGTGGCCCAGTTCTGAAAGCTTTATACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR TCA 90 bp TGTTGGCCTTTCAAGAGTATTCACCTCCCTGCCGAAGAGACAGCTTaGGTATGGAGGTTTAAAAACAATCCAGACAGGTGCTCCCTGTTG +
Preference number: 1 (lower is better)
Translates to: CWPFKSIHLPAEETA*VWRFKNNPDRCSLL
Trigger: CAACAGGGAGCACCTGTCTGGATTGTTTTTAAACCTCCATACTCAAGCTGTCTCTTCGGCAGGGAGGTGAATACTCTTGAAAGGCCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR GCA 90 bp CAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTaGTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTTCTCTTGAG +
Preference number: 1 (lower is better)
Translates to: QLGKAPGYDSLERRP*SHFGLCNTWVVSLE
Trigger: CTCAAGAGAAACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGCGGCATGCACCTGGCTaGCTACACGCCCCGCCCCTC +
Preference number: 2 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTRHAPG*LHAPPL
Trigger: GAGGGGCGGGGCGTGTAGCCAGCCAGGTGCATGCCG...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGCAAGTATGGGGGCCATaGTCCCGGCATGCACCTGGC +
Preference number: 2 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTQVWGP*SRHAPG
Trigger: GCCAGGTGCATGCCGGGACCATGGCCCCCATACTTG...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGGAGTCCACTGGCCTCTaGTGCTACTGCCCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLESTGL*CYCPES
Trigger: GCTTTCAGGGCAGTAGCAGCAGAGGCCAGTGGACTC...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGTCCTCAGAGTCCACTaGCCTCTGCTGCTACTGCCC +
Preference number: 2 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLVLRVH*PLLLLP
Trigger: GGGCAGTAGCAGCAGAGGCCAGTGGACTCTGAGGAC...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTGTCCCGGCATGCACCTaGCTGGCTACACGCCCCGCC +
Preference number: 2 (lower is better)
Translates to: VRHQVTIVWREGLAPILAVPACT*LATRPA
Trigger: GGCGGGGCGTGTAGCCAGCCAGGTGCATGCCGGGAC...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTCTGCTGCTACTGCCCTaGAAGCCATCTGTGGCTTTA +
Preference number: 2 (lower is better)
Translates to: LWVTHRKPDPATECSGCLLLLLP*KPSVAL
Trigger: TAAAGCCACAGATGGCTTTCAGGGCAGTAGCAGCAG...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTACAGGTGCTCCCTGTTaGCCTCGTTACCTAGGATTG +
Preference number: 2 (lower is better)
Translates to: LWVTHRKPDPATECSGCLTGAPC*PRYLGL
Trigger: CAATCCTAGGTAACGAGGGCAACAGGGAGCACCTGT...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAGCCATGGTCCCGGCATaGACCTGGCTGGCTACACGC +
Preference number: 2 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRAMVPA*TWLATR
Trigger: GCGTGTAGCCAGCCAGGTGCATGCCGGGACCATGGC...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTAACAATCCAGACAGGTaGTCCCTGTTGCCCTCGTTA +
Preference number: 2 (lower is better)
Translates to: LWVTHRKPDPATECSGCLNNPDR*SLLPSL
Trigger: TAACGAGGGCAACAGGGAGCACCTGTCTGGATTGTT...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTGTCCCGGCATGCACCTaGCTGGCTACACGCCCCGCC +
Preference number: 2 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVVPACT*LATRPA
Trigger: GGCGGGGCGTGTAGCCAGCCAGGTGCATGCCGGGAC...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGCAAATGTCACTTTCTaGTCTCCACAGGAACCACTC +
Preference number: 2 (lower is better)
Translates to: LWVTHRKPDPATECSGCLANVTF*SPQEPL
Trigger: GAGTGGTTCCTGTGGAGATCAGAAAGTGACATTTGC...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCGGAAGCAGCCAAGTATaGGGGCCATGGTCCCGGCAT +
Preference number: 2 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSGSSQV*GPWSRH
Trigger: ATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCC...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTGCCCGACCCTGCAACTaGGTGTTCAGGCTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: VRHQVTIVWREGLAPILAARPCN*VFRLPC
Trigger: ACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGC...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGACTACTGACCAACACTTaGTTTCCTCCGCATAGCACT +
Preference number: 2 (lower is better)
Translates to: TASPTLQLSVQAALWCLGLLTNT*FPPHST
Trigger: AGTGCTATGCGGAGGAAAGCAAGTGTTGGTCAGTAG...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTGTCCTCAGAGTCCACTaGCCTCTGCTGCTACTGCCC +
Preference number: 2 (lower is better)
Translates to: VRHQVTIVWREGLAPILAVLRVH*PLLLLP
Trigger: GGGCAGTAGCAGCAGAGGCCAGTGGACTCTGAGGAC...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGGCCGAAGAGACAGCTTaGGTATGGAGGTTTAAAAAC +
Preference number: 2 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTAEETA*VWRFKN
Trigger: GTTTTTAAACCTCCATACTCAAGCTGTCTCTTCGGC...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTATTGAGGCAGTTTGGTaGACGTATTACAGTACCGAA +
Preference number: 2 (lower is better)
Translates to: LWVTHRKPDPATECSGCLIEAVW*TYYSTE
Trigger: TTCGGTACTGTAATACGTGCACCAAACTGCCTCAAT...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCTCCACTGGCCTCTGCTaGTACTGCCCTGAAAGCCAT +
Preference number: 2 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSSTGLC*YCPESH
Trigger: ATGGCTTTCAGGGCAGTAGCAGCAGAGGCCAGTGGA...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGGTGCCATACAGTCAGTaGGATGTTTTCTGTTGGTTG +
Preference number: 2 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTVPYSQ*DVFCWL
Trigger: CAACCAACAGAAAACATCCCACTGACTGTATGGCAC...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGGATTGAGGCAGTTTaGTGCACGTATTACAGTACC +
Preference number: 2 (lower is better)
Translates to: TASPTLQLSVQAALWCLGRIEAV*CTYYST
Trigger: GGTACTGTAATACGTGCACCAAACTGCCTCAATCCT...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGAGGATTGAGGCAGTTTaGTGCACGTATTACAGTACC +
Preference number: 2 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLRIEAV*CTYYST
Trigger: GGTACTGTAATACGTGCACCAAACTGCCTCAATCCT...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTCAAGTATGGGGGCCATaGTCCCGGCATGCACCTGGC +
Preference number: 2 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVQVWGP*SRHAPG
Trigger: GCCAGGTGCATGCCGGGACCATGGCCCCCATACTTG...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGGCTATTCTCCTGAGATaGCACCTTTTTCTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTAILLR*HLFLQK
Trigger: CTTCTGGAGAAAAAGGTGCCATCTCAGGAGAATAGC...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTAATGGTGTGAAAGTCTaGATCAACAGCAAATACAGC +
Preference number: 2 (lower is better)
Translates to: LWVTHRKPDPATECSGCLNGVKV*INSKYS
Trigger: GCTGTATTTGCTGTTGATTCAGACTTTCACACCATT...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGTCCCCATTAATGGTGTaGAAGTCTGAATCAACAGCA +
Preference number: 2 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLSPLMV*KSESTA
Trigger: TGCTGTTGATTCAGACTTTCACACCATTAATGGGGA...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCCAGGCGCGGCAAGATaGGACTGTATTCAGTTAGGT +
Preference number: 2 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSPGAAR*DCIQLG
Trigger: ACCTAACTGAATACAGTCTCATCTTGCCGCGCCTGG...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCGTTCAGGCTGCCTTGTaGTGTCTCGGAAGCATTCCT +
Preference number: 2 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSVQAAL*CLGSIP
Trigger: AGGAATGCTTCCGAGACACCACAAGGCAGCCTGAAC...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGAATGGTGTGAAAGTCTaGATCAACAGCAAATACAGC +
Preference number: 2 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLNGVKV*INSKYS
Trigger: GCTGTATTTGCTGTTGATTCAGACTTTCACACCATT...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTCTGCTGCTACTGCCCTaGAAGCCATCTGTGGCTTTA +
Preference number: 2 (lower is better)
Translates to: VRHQVTIVWREGLAPILALLLLP*KPSVAL
Trigger: TAAAGCCACAGATGGCTTTCAGGGCAGTAGCAGCAG...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAGAGTATTCACCTCCCTaGCGAAGAGACAGCTTGAGT +
Preference number: 2 (lower is better)
Translates to: LQLSVQAALWCLGSIPTREYSPP*RRDSLS
Trigger: ACTCAAGCTGTCTCTTCGGCAGGGAGGTGAATACTC...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTGGCCTCTGCTGCTACTaGCCTGAAAGCCATCTGTGG +
Preference number: 2 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVGLCCY*PESHLW
Trigger: CCACAGATGGCTTTCAGGGCAGTAGCAGCAGAGGCC...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGACAAACACTTGCTGTTaGCCTTTCAAGAGTATTCAC +
Preference number: 2 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTTNTCC*PFKSIH
Trigger: GTGAATACTCTTGAAAGGCCAACAGCAAGTGTTTGT...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGACAAACACTTGCTGTTaGCCTTTCAAGAGTATTCAC +
Preference number: 2 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLTNTCC*PFKSIH
Trigger: GTGAATACTCTTGAAAGGCCAACAGCAAGTGTTTGT...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTGAGTATTCACCTCCCTaGCGAAGAGACAGCTTGAGT +
Preference number: 2 (lower is better)
Translates to: VRHQVTIVWREGLAPILAEYSPP*RRDSLS
Trigger: ACTCAAGCTGTCTCTTCGGCAGGGAGGTGAATACTC...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGGAACTATTGTTACCATaGTTGACCTGTGTACATAAT +
Preference number: 2 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLELLLP*LTCVHN
Trigger: ATTATGTACACAGGTCAACCATGGTAACAATAGTTC...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAGCCGAAGAGACAGCTTaGGTATGGAGGTTTAAAAAC +
Preference number: 2 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRAEETA*VWRFKN
Trigger: GTTTTTAAACCTCCATACTCAAGCTGTCTCTTCGGC...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGTGTTCCTCCCTTTTaGTCTTCTGTACATTATAAT +
Preference number: 2 (lower is better)
Translates to: TASPTLQLSVQAALWCLGSVPPF*SSVHYN
Trigger: ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACT...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CAA 90 bp ATGGCACCTTTTTCTCCAGAAGATTCAGCCCTAACAGCTGCCACCTaGAAGGATGTATTTCACTGTCACAGGAAGCAGCCAAGTATGGGG +
Preference number: 2 (lower is better)
Translates to: MAPFSPEDSALTAAT*KDVFHCHRKQPSMG
Trigger: CCCCATACTTGGCTGCTTCCTGTGACAGTGAAATACATCCTTCAAGGTGGCAGCTGTTAGGGCTGAATCTTCTGGAGAAAAAGGTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCATTGAGGCAGTTTGGTaGACGTATTACAGTACCGAA +
Preference number: 2 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSIEAVW*TYYSTE
Trigger: TTCGGTACTGTAATACGTGCACCAAACTGCCTCAAT...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CAA 90 bp AAAACAATCCAGACAGGTGCTCCCTGTTGCCCTCGTTACCTAGGATaGAGGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTC +
Preference number: 2 (lower is better)
Translates to: KTIQTGAPCCPRYLG*RQFGARITVPKANV
Trigger: GACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCCTCAATCCTAGGTAACGAGGGCAACAGGGAGCACCTGTCTGGATTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CAA 90 bp CCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTaGTGTAATACCTGGGTAGTTTCTCTTGAGTCTGTCAAGCAGAGA +
Preference number: 2 (lower is better)
Translates to: PGYDSLERRPCSHFG*CNTWVVSLESVKQR
Trigger: TCTCTGCTTGACAGACTCAAGAGAAACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGATATTGTTACCATGGTTaGCCTGTGTACATAATGCAC +
Preference number: 2 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRYCYHG*PVYIMH
Trigger: GTGCATTATGTACACAGGTCAACCATGGTAACAATA...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR TCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTGCAAATGTCACTTTCTaGTCTCCACAGGAACCACTC +
Preference number: 2 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVANVTF*SPQEPL
Trigger: GAGTGGTTCCTGTGGAGATCAGAAAGTGACATTTGC...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTGCTATTCTCCTGAGATaGCACCTTTTTCTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVAILLR*HLFLQK
Trigger: CTTCTGGAGAAAAAGGTGCCATCTCAGGAGAATAGC...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR GCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCTACTGACCAACACTTaGTTTCCTCCGCATAGCACT +
Preference number: 2 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLLLTNT*FPPHST
Trigger: AGTGCTATGCGGAGGAAAGCAAGTGTTGGTCAGTAG...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCATTCTTCTATCTAACTaGCTTTACAGATTTCCCTCA +
Preference number: 2 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSILLSN*LYRFPS
Trigger: TGAGGGAAATCTGTAAAGCCAGTTAGATAGAAGAAT...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTGTAGTTCAGCCAAAGTaGCATTCTCTAAAGCAAAAT +
Preference number: 2 (lower is better)
Translates to: VRHQVTIVWREGLAPILAVVQPK*HSLKQN
Trigger: ATTTTGCTTTAGAGAATGCCACTTTGGCTGAACTAC...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTAAGGCATGGTTTGCATaGAGTTTCAAAGCTAAGAAC +
Preference number: 2 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVKAWFA*SFKAKN
Trigger: GTTCTTAGCTTTGAAACTCCATGCAAACCATGCCTT...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCAAGGCATGGTTTGCATaGAGTTTCAAAGCTAAGAAC +
Preference number: 2 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLKAWFA*SFKAKN
Trigger: GTTCTTAGCTTTGAAACTCCATGCAAACCATGCCTT...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGATGTGTCAACACAACTaGACTAAGAAAGAAAAGTCC +
Preference number: 2 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRMCQHN*TKKEKS
Trigger: GGACTTTTCTTTCTTAGTCCAGTTGTGTTGACACAT...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGGAACTATTGTTACCATaGTTGACCTGTGTACATAAT +
Preference number: 2 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRELLLP*LTCVHN
Trigger: ATTATGTACACAGGTCAACCATGGTAACAATAGTTC...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR TCA 72 bp GCTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTaGGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCA +
Preference number: 3 (lower is better)
Translates to: ALGHPPQARPCN*VFRLPCGVSEA
Trigger: TGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CAA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGACAGGTGCTCCCTGTaGCCCTCGTTACCTAGGATT +
Preference number: 3 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLDRCSL*PSLPRI
Trigger: AATCCTAGGTAACGAGGGCAACAGGGAGCACCTGTC...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CAA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGCCTCGTTACCTAGGATaGAGGCAGTTTGGTGCACGT +
Preference number: 3 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLPRYLG*RQFGAR
Trigger: ACGTGCACCAAACTGCCTCAATCCTAGGTAACGAGG...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CCA 72 bp CCACACAGGTGTACTTCACTGAGCACTTTCCACCCATaGCCTAAAGGCAGGAGGTGTGGAAGTCCCCTCCAG +
Preference number: 3 (lower is better)
Translates to: PHRCTSLSTFHP*PKGRRCGSPLQ
Trigger: CTGGAGGGGACTTCCACACCTCCTGCCTTTAGGCCATGGGTGGAAAGTGCTCAGTGAAGTACACCTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CAA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGACTAACAGCTGCCACCTaGAAGGATGTATTTCACTGT +
Preference number: 3 (lower is better)
Translates to: TASPTLQLSVQAALWCLGLTAAT*KDVFHC
Trigger: ACAGTGAAATACATCCTTCAAGGTGGCAGCTGTTAG...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR TCA 72 bp AAGCTTTCAGAACTGGGCCACACAGGTGTACTTCACTaGGCACTTTCCACCCATGGCCTAAAGGCAGGAGGT +
Preference number: 3 (lower is better)
Translates to: KLSELGHTGVLH*ALSTHGLKAGG
Trigger: ACCTCCTGCCTTTAGGCCATGGGTGGAAAGTGCTCAGTGAAGTACACCTGTGTGGCCCAGTTCTGAAAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CAA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGCTATTGTTACCATGGTaGACCTGTGTACATAATGCA +
Preference number: 3 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLLLLPW*TCVHNA
Trigger: TGCATTATGTACACAGGTCAACCATGGTAACAATAG...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CAA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAACAAAAGTGACTGGTTaGAGGTTTTGTAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRTKVTG*RFCRQR
Trigger: CCTCTGCCTACAAAACCTCAAACCAGTCACTTTTGT...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CAA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGACTAACAGCTGCCACCTaGAAGGATGTATTTCACTGT +
Preference number: 3 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRLTAAT*KDVFHC
Trigger: ACAGTGAAATACATCCTTCAAGGTGGCAGCTGTTAG...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR GCA 72 bp GGAGGTTTAAAAACAATCCAGACAGGTGCTCCCTGTTaGCCTCGTTACCTAGGATTGAGGCAGTTTGGTGCA +
Preference number: 3 (lower is better)
Translates to: GGLKTIQTGAPC*PRYLGLRQFGA
Trigger: TGCACCAAACTGCCTCAATCCTAGGTAACGAGGGCAACAGGGAGCACCTGTCTGGATTGTTTTTAAACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR GCA 72 bp AAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTaGTCCCATTTTGGCTTGTGTAATACCTGGGTAGTT +
Preference number: 3 (lower is better)
Translates to: KAPGYDSLERRP*SHFGLCNTWVV
Trigger: AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CCA 72 bp AAGCACAACTTGGTAAGGCACCAGGTTACGATAGTCTaGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTA +
Preference number: 3 (lower is better)
Translates to: KHNLVRHQVTIV*REGLAPILACV
Trigger: TACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CAA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTCTATTGTTACCATGGTaGACCTGTGTACATAATGCA +
Preference number: 3 (lower is better)
Translates to: VRHQVTIVWREGLAPILALLLPW*TCVHNA
Trigger: TGCATTATGTACACAGGTCAACCATGGTAACAATAG...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CAA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGCCTCCGCATAGCACTTaGTCTGTGTTCATATGTGTC +
Preference number: 3 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRPPHST*SVFICV
Trigger: GACACATATGAACACAGACAAAGTGCTATGCGGAGG...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR TCA 72 bp TTCAAGAGTATTCACCTCCCTGCCGAAGAGACAGCTTaGGTATGGAGGTTTAAAAACAATCCAGACAGGTGC +
Preference number: 3 (lower is better)
Translates to: FKSIHLPAEETA*VWRFKNNPDRC
Trigger: GCACCTGTCTGGATTGTTTTTAAACCTCCATACTCAAGCTGTCTCTTCGGCAGGGAGGTGAATACTCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CCA 72 bp AAATTATCTGTGTTGTGTCCCACAAACACTTGCTGTTaGCCTTTCAAGAGTATTCACCTCCCTGCCGAAGAG +
Preference number: 3 (lower is better)
Translates to: KLSVLCPTNTCC*PFKSIHLPAEE
Trigger: CTCTTCGGCAGGGAGGTGAATACTCTTGAAAGGCCAACAGCAAGTGTTTGTGGGACACAACACAGATAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR-3UTR CAA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGACAAAAGTGACTGGTTaGAGGTTTTGTAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRTKVTG*RFCRQR
Trigger: CCTCTGCCTACAAAACCTCAAACCAGTCACTTTTGT...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR TCA 72 bp GTGGCCACGCTTTTCCCCATTAATGGTGTGAAAGTCTaGATCAACAGCAAATACAGCCATACAGACCTATGT +
Preference number: 3 (lower is better)
Translates to: VATLFPINGVKV*INSKYSHTDLC
Trigger: ACATAGGTCTGTATGGCTGTATTTGCTGTTGATTCAGACTTTCACACCATTAATGGGGAAAAGCGTGGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR GCA 72 bp AATCAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTaGTCTTCTGTACATTATAATGTAGCAGAACTTCAT +
Preference number: 3 (lower is better)
Translates to: NQERVNHSVPPF*SSVHYNVAELH
Trigger: ATGAAGTTCTGCTACATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGCGACCAGCACGCACTTaGCGCCGCGCCCCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLRPART*RRAPRH
Trigger: GTGCCGAGGGGCGCGGCGTCAAGTGCGTGCTGGTCG...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGCGGCGCCAGCCGCTCTaGCCTGCGCTGTTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLRRQPL*PALLED
Trigger: GTCCTCCAACAGCGCAGGGCAGAGCGGCTGGCGCCG...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGCGGCATGCACCTGGCTaGCTACACGCCCCGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLRHAPG*LHAPPL
Trigger: GAGGGGCGGGGCGTGTAGCCAGCCAGGTGCATGCCG...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGGTCCCGGCATGCACCTaGCTGGCTACACGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTVPACT*LATRPA
Trigger: GGCGGGGCGTGTAGCCAGCCAGGTGCATGCCGGGAC...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAGCCATGGTCCCGGCATaGACCTGGCTGGCTACACGC +
Preference number: 4 (lower is better)
Translates to: TASPTLQLSVQAALWCLGAMVPA*TWLATR
Trigger: GCGTGTAGCCAGCCAGGTGCATGCCGGGACCATGGC...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGATCTGCCCTGCGCTGTTaGAGGACAGCGGTCCGAGCG +
Preference number: 4 (lower is better)
Translates to: TASPTLQLSVQAALWCLGSALRC*RTAVRA
Trigger: CGCTCGGACCGCTGTCCTCCAACAGCGCAGGGCAGA...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTCAAGTATGGGGGCCATaGTCCCGGCATGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: LWVTHRKPDPATECSGCLQVWGP*SRHAPG
Trigger: GCCAGGTGCATGCCGGGACCATGGCCCCCATACTTG...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCGCTGTCACCGACAGCTaGGGGCGCGTCCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSAVTDS*GRVPGP
Trigger: AGGGCCGGGGACGCGCCCGCAGCTGTCGGTGACAGC...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGCGGTGGGGTAGCCGTTaGTGGTGTAGCTCACCACCA +
Preference number: 4 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLRWGSR*WCSSPP
Trigger: TGGTGGTGAGCTACACCACCAACGGCTACCCCACCG...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGGTCCTCAGAGTCCACTaGCCTCTGCTGCTACTGCCC +
Preference number: 4 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLVLRVH*PLLLLP
Trigger: GGGCAGTAGCAGCAGAGGCCAGTGGACTCTGAGGAC...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCCCGACCCTGCAACTaGGTGTTCAGGCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLARPCN*VFRLPC
Trigger: ACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGC...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAGCCCGACCCTGCAACTaGGTGTTCAGGCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: TASPTLQLSVQAALWCLGARPCN*VFRLPC
Trigger: ACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGC...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGACGGCGCCAGCCGCTCTaGCCTGCGCTGTTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRRRQPL*PALLED
Trigger: GTCCTCCAACAGCGCAGGGCAGAGCGGCTGGCGCCG...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGTGTAGGAGGCGGCTTTaGTTTCCTCGGCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLCRRRL*FPRRTA
Trigger: AGCTGTGCGCCGAGGAAATCAAAGCCGCCTCCTACA...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCCAGCCGCTCTGCCCTaGGCTGTTGGAGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSPAALP*AVGGQR
Trigger: CCGCTGTCCTCCAACAGCGCAGGGCAGAGCGGCTGG...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGACCAGCCGCTCTGCCCTaGGCTGTTGGAGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRPAALP*AVGGQR
Trigger: CCGCTGTCCTCCAACAGCGCAGGGCAGAGCGGCTGG...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGGCCTCTGCTGCTACTaGCCTGAAAGCCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLGLCCY*PESHLW
Trigger: CCACAGATGGCTTTCAGGGCAGTAGCAGCAGAGGCC...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGTCCACTGGCCTCTGCTaGTACTGCCCTGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLSTGLC*YCPESH
Trigger: ATGGCTTTCAGGGCAGTAGCAGCAGAGGCCAGTGGA...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGCACCCATTTCTCACTaGCGTTCTGGAAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LWVTHRKPDPATECSGCLAPISH*RSGRMR
Trigger: CCTCATCCTTCCAGAACGTCAGTGAGAAATGGGTGC...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAGCGTTCCAACTAGGATaGTGGGGGCTTTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: TASPTLQLSVQAALWCLGAFQLG*WGLWDS
Trigger: ACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACGC...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGACAGGTGTACTTCACTaGGCACTTTCCACCCATGGC +
Preference number: 4 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLTGVLH*ALSTHG
Trigger: GCCATGGGTGGAAAGTGCTCAGTGAAGTACACCTGT...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTCAGGTTACGATAGTCTaGAGAGAAGGCCTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LWVTHRKPDPATECSGCLQVTIV*REGLAP
Trigger: GGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTG...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGCTGCTGCTACTGCCCTaGAAGCCATCTGTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLLLLLP*KPSVAL
Trigger: TAAAGCCACAGATGGCTTTCAGGGCAGTAGCAGCAG...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGACTGCTGCTACTGCCCTaGAAGCCATCTGTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: TASPTLQLSVQAALWCLGLLLLP*KPSVAL
Trigger: TAAAGCCACAGATGGCTTTCAGGGCAGTAGCAGCAG...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTGCCATGGTCCCGGCATaGACCTGGCTGGCTACACGC +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILAAMVPA*TWLATR
Trigger: GCGTGTAGCCAGCCAGGTGCATGCCGGGACCATGGC...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGACTGAGTGTTCAGGCTaGCTTGTGGTGTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLTECSG*LVVSRK
Trigger: CTTCCGAGACACCACAAGGCAGCCTGAACACTCAGT...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAACTGAGTGTTCAGGCTaGCTTGTGGTGTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: TASPTLQLSVQAALWCLGTECSG*LVVSRK
Trigger: CTTCCGAGACACCACAAGGCAGCCTGAACACTCAGT...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTCTGGAGAGAAGGCCTTaGTCCCATTTTGGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LWVTHRKPDPATECSGCLLERRP*SHFGLC
Trigger: ACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAG...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTCTGCCCTGCGCTGTTaGAGGACAGCGGTCCGAGCG +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILASALRC*RTAVRA
Trigger: CGCTCGGACCGCTGTCCTCCAACAGCGCAGGGCAGA...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGTTCTCACTGACGTTCTaGAAGGATGAGGGGCTCACG +
Preference number: 4 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTFSLTF*KDEGLT
Trigger: CGTGAGCCCCTCATCCTTCCAGAACGTCAGTGAGAA...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGTTCAGGCTGCCTTGTaGTGTCTCGGAAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLVQAAL*CLGSIP
Trigger: AGGAATGCTTCCGAGACACCACAAGGCAGCCTGAAC...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGAGCACTTTCCACCCATaGCCTAAAGGCAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLSTFHP*PKGRRC
Trigger: ACACCTCCTGCCTTTAGGCCATGGGTGGAAAGTGCT...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCGACCAGCACGCACTTaGCGCCGCGCCCCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLRPART*RRAPRH
Trigger: GTGCCGAGGGGCGCGGCGTCAAGTGCGTGCTGGTCG...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGGCAAATGTCACTTTCTaGTCTCCACAGGAACCACTC +
Preference number: 4 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLANVTF*SPQEPL
Trigger: GAGTGGTTCCTGTGGAGATCAGAAAGTGACATTTGC...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGTCTCTGAGATCCGACTaGGTTCCAACTAGGATGATG +
Preference number: 4 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLSLRSD*VPTRMM
Trigger: CATCATCCTAGTTGGAACGCAGTCGGATCTCAGAGA...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTTCTCTGAGATCCGACTaGGTTCCAACTAGGATGATG +
Preference number: 4 (lower is better)
Translates to: LWVTHRKPDPATECSGCLSLRSD*VPTRMM
Trigger: CATCATCCTAGTTGGAACGCAGTCGGATCTCAGAGA...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGAGTATTCACCTCCCTaGCGAAGAGACAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLEYSPP*RRDSLS
Trigger: ACTCAAGCTGTCTCTTCGGCAGGGAGGTGAATACTC...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCGCAGTGTCACAGAGTTaGAGTCTCACGGGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSAVSQS*SLTGRP
Trigger: TGGGCGGCCCGTGAGACTCCAACTCTGTGACACTGC...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAGGGGCTTTGGGACAGTaGCATCGAATCTCCGGCACC +
Preference number: 4 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRGALGQ*HRISGT
Trigger: GGTGCCGGAGATTCGATGCCACTGTCCCAAAGCCCC...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGGAATGCCAGCGACGATaGCTGCATCAAAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTECQRR*LHQRPL
Trigger: AAGAGGTCTTTGATGCAGCCATCGTCGCTGGCATTC...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTCAAGTATGGGGGCCATaGTCCCGGCATGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILAQVWGP*SRHAPG
Trigger: GCCAGGTGCATGCCGGGACCATGGCCCCCATACTTG...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAGCAAATGTCACTTTCTaGTCTCCACAGGAACCACTC +
Preference number: 4 (lower is better)
Translates to: TASPTLQLSVQAALWCLGANVTF*SPQEPL
Trigger: GAGTGGTTCCTGTGGAGATCAGAAAGTGACATTTGC...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGACTGGGTAGTTTCTCTTaGGTCTGTCAAGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: TASPTLQLSVQAALWCLGLGSFS*VCQAEN
Trigger: GTTCTCTGCTTGACAGACTCAAGAGAAACTACCCAG...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTGCAGTGTCACAGAGTTaGAGTCTCACGGGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILAAVSQS*SLTGRP
Trigger: TGGGCGGCCCGTGAGACTCCAACTCTGTGACACTGC...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGGCTTTTAGACTTCTTTaGCTGTTGCTGAGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLAFRLL*LLLSVR
Trigger: TCGGACACTCAGCAACAGCCAAAGAAGTCTAAAAGC...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGCCATACAGTCAGTaGGATGTTTTCTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: LWVTHRKPDPATECSGCLVPYSQ*DVFCWL
Trigger: CAACCAACAGAAAACATCCCACTGACTGTATGGCAC...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTGGAAGCAGCCAAGTATaGGGGCCATGGTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILAGSSQV*GPWSRH
Trigger: ATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCC...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCGACGTTCTGGAAGGATaGGGGGCTCACGACACTGAA +
Preference number: 4 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSDVLEG*GAHDTE
Trigger: TTCAGTGTCGTGAGCCCCTCATCCTTCCAGAACGTC...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTTCCCCATTAATGGTGTaGAAGTCTGAATCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LWVTHRKPDPATECSGCLSPLMV*KSESTA
Trigger: TGCTGTTGATTCAGACTTTCACACCATTAATGGGGA...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGAGGATTGAGGCAGTTTaGTGCACGTATTACAGTACC +
Preference number: 4 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTRIEAV*CTYYST
Trigger: GGTACTGTAATACGTGCACCAAACTGCCTCAATCCT...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CAA 72 bp CTTTACAGATTTCCCTCATTAGTTGTGGATGTGACTTaGGTGGCTCTGGGTCACCCACCGCAAGCCCGACCC +
Preference number: 4 (lower is better)
Translates to: LYRFPSLVVDVT*VALGHPPQARP
Trigger: GGGTCGGGCTTGCGGTGGGTGACCCAGAGCCACCAAAGTCACATCCACAACTAATGAGGGAAATCTGTAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGAATGGTGTGAAAGTCTaGATCAACAGCAAATACAGC +
Preference number: 4 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLNGVKV*INSKYS
Trigger: GCTGTATTTGCTGTTGATTCAGACTTTCACACCATT...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGACCAGGCGCGGCAAGATaGGACTGTATTCAGTTAGGT +
Preference number: 4 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRPGAAR*DCIQLG
Trigger: ACCTAACTGAATACAGTCTCATCTTGCCGCGCCTGG...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCACAGGTGCTCCCTGTTaGCCTCGTTACCTAGGATTG +
Preference number: 4 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSTGAPC*PRYLGL
Trigger: CAATCCTAGGTAACGAGGGCAACAGGGAGCACCTGT...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTCCACTGGCCTCTGCTaGTACTGCCCTGAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILASTGLC*YCPESH
Trigger: ATGGCTTTCAGGGCAGTAGCAGCAGAGGCCAGTGGA...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTTGGGGTAGCCGTTGGTaGTGTAGCTCACCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVWGSRW*CSSPPG
Trigger: GCCTGGTGGTGAGCTACACCACCAACGGCTACCCCA...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGATATTGTTACCATGGTTaGCCTGTGTACATAATGCAC +
Preference number: 4 (lower is better)
Translates to: TASPTLQLSVQAALWCLGYCYHG*PVYIMH
Trigger: GTGCATTATGTACACAGGTCAACCATGGTAACAATA...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCTGTCCGAGTATTGAATaGCAGCGACGATGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSCPSIE*QRRWLH
Trigger: ATGCAGCCATCGTCGCTGGCATTCAATACTCGGACA...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCGAGTATTCACCTCCCTaGCGAAGAGACAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSEYSPP*RRDSLS
Trigger: ACTCAAGCTGTCTCTTCGGCAGGGAGGTGAATACTC...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTGAGTCCACTGGCCTCTaGTGCTACTGCCCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVESTGL*CYCPES
Trigger: GCTTTCAGGGCAGTAGCAGCAGAGGCCAGTGGACTC...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAGAATGCCAGCGACGATaGCTGCATCAAAGACCTCTT +
Preference number: 4 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRECQRR*LHQRPL
Trigger: AAGAGGTCTTTGATGCAGCCATCGTCGCTGGCATTC...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTTCTTCCACCAGGACTTaGAGAGGTTTTTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: LWVTHRKPDPATECSGCLSSTRT*RGFSFY
Trigger: ATAAAATGAAAAACCTCTCCAAGTCCTGGTGGAAGA...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTAGTTCAGCCAAAGTaGCATTCTCTAAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: LWVTHRKPDPATECSGCLVVQPK*HSLKQN
Trigger: ATTTTGCTTTAGAGAATGCCACTTTGGCTGAACTAC...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCTTTTTGAGTCAAGGCTaGACACTCGATGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSFLSQG*TLDVGG
Trigger: GCCTCCTACATCGAGTGTTCAGCCTTGACTCAAAAA...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGAGTGTTCCTCCCTTTTaGTCTTCTGTACATTATAAT +
Preference number: 4 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLSVPPF*SSVHYN
Trigger: ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACT...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTCTGGAGAGAAGGCCTTaGTCCCATTTTGGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILALERRP*SHFGLC
Trigger: ACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAG...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCTGGGGTAGCCGTTGGTaGTGTAGCTCACCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLWGSRW*CSSPPG
Trigger: GCCTGGTGGTGAGCTACACCACCAACGGCTACCCCA...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAATGTGTCAACACAACTaGACTAAGAAAGAAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TASPTLQLSVQAALWCLGMCQHN*TKKEKS
Trigger: GGACTTTTCTTTCTTAGTCCAGTTGTGTTGACACAT...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGGTCCTCAGAGTCCACTaGCCTCTGCTGCTACTGCCC +
Preference number: 4 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRVLRVH*PLLLLP
Trigger: GGGCAGTAGCAGCAGAGGCCAGTGGACTCTGAGGAC...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CAA 72 bp CAGACAGGTGCTCCCTGTTGCCCTCGTTACCTAGGATaGAGGCAGTTTGGTGCACGTATTACAGTACCGAAA +
Preference number: 4 (lower is better)
Translates to: QTGAPCCPRYLG*RQFGARITVPK
Trigger: TTTCGGTACTGTAATACGTGCACCAAACTGCCTCAATCCTAGGTAACGAGGGCAACAGGGAGCACCTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCGCCGAAGAGACAGCTTaGGTATGGAGGTTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSAEETA*VWRFKN
Trigger: GTTTTTAAACCTCCATACTCAAGCTGTCTCTTCGGC...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTCTACTGACCAACACTTaGTTTCCTCCGCATAGCACT +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILALLTNT*FPPHST
Trigger: AGTGCTATGCGGAGGAAAGCAAGTGTTGGTCAGTAG...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCGGCCTCTGCTGCTACTaGCCTGAAAGCCATCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLGLCCY*PESHLW
Trigger: CCACAGATGGCTTTCAGGGCAGTAGCAGCAGAGGCC...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCGAGTCCACTGGCCTCTaGTGCTACTGCCCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLESTGL*CYCPES
Trigger: GCTTTCAGGGCAGTAGCAGCAGAGGCCAGTGGACTC...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTTTCTCACTGACGTTCTaGAAGGATGAGGGGCTCACG +
Preference number: 4 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVFSLTF*KDEGLT
Trigger: CGTGAGCCCCTCATCCTTCCAGAACGTCAGTGAGAA...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAGTGCCATACAGTCAGTaGGATGTTTTCTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRVPYSQ*DVFCWL
Trigger: CAACCAACAGAAAACATCCCACTGACTGTATGGCAC...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAAGGATTGAGGCAGTTTaGTGCACGTATTACAGTACC +
Preference number: 4 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRRIEAV*CTYYST
Trigger: GGTACTGTAATACGTGCACCAAACTGCCTCAATCCT...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAGCTATTCTCCTGAGATaGCACCTTTTTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRAILLR*HLFLQK
Trigger: CTTCTGGAGAAAAAGGTGCCATCTCAGGAGAATAGC...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGATTCTTCTATCTAACTaGCTTTACAGATTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTILLSN*LYRFPS
Trigger: TGAGGGAAATCTGTAAAGCCAGTTAGATAGAAGAAT...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGAGGGGCTCACGACACTaGAGCAGAGCAGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRRGSRH*SRAGRC
Trigger: ACATCTTCCTGCTCTGCTTCAGTGTCGTGAGCCCCT...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCAGGGGCTCACGACACTaGAGCAGAGCAGGAAGATGT +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLRGSRH*SRAGRC
Trigger: ACATCTTCCTGCTCTGCTTCAGTGTCGTGAGCCCCT...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCGCGTTCCAACTAGGATaGTGGGGGCTTTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLAFQLG*WGLWDS
Trigger: ACTGTCCCAAAGCCCCCATCATCCTAGTTGGAACGC...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGATGCTTCAGGAAACTATaGCCGACATCAATTCCAATG +
Preference number: 4 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRCFRKL*PTSIPM
Trigger: CATTGGAATTGATGTCGGTCATAGTTTCCTGAAGCA...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTTGTCCGAGTATTGAATaGCAGCGACGATGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVCPSIE*QRRWLH
Trigger: ATGCAGCCATCGTCGCTGGCATTCAATACTCGGACA...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGGCACCCATTTCTCACTaGCGTTCTGGAAGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRAPISH*RSGRMR
Trigger: CCTCATCCTTCCAGAACGTCAGTGAGAAATGGGTGC...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGGCCAGCGACGATGGCTaGATCAAAGACCTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRASDDG*IKDLFE
Trigger: CTCAAAGAGGTCTTTGATGCAGCCATCGTCGCTGGC...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTATTGAGGCAGTTTGGTaGACGTATTACAGTACCGAA +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILAIEAVW*TYYSTE
Trigger: TTCGGTACTGTAATACGTGCACCAAACTGCCTCAAT...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTGCTCTTCTGTACATTATAATGGGGCTTTGGGACAGTaGCATCGAATCTCCGGCACC +
Preference number: 4 (lower is better)
Translates to: QERVNHSVPPFCSSVHYNGALGQ*HRISGT
Trigger: GGTGCCGGAGATTCGATGCCACTGTCCCAAAGCCCC...ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCGTTCAGGCTGCCTTGTaGTGTCTCGGAAGCATTCCT +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLVQAAL*CLGSIP
Trigger: AGGAATGCTTCCGAGACACCACAAGGCAGCCTGAAC...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCAGCACTTTCCACCCATaGCCTAAAGGCAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLSTFHP*PKGRRC
Trigger: ACACCTCCTGCCTTTAGGCCATGGGTGGAAAGTGCT...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp CAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTGCTCTTCTGTACATTATAATTGTAGGAGGCGGCTTTaGTTTCCTCGGCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: QERVNHSVPPFCSSVHYNCRRRL*FPRRTA
Trigger: AGCTGTGCGCCGAGGAAATCAAAGCCGCCTCCTACA...ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTAAGGCATGGTTTGCATaGAGTTTCAAAGCTAAGAAC +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILAKAWFA*SFKAKN
Trigger: GTTCTTAGCTTTGAAACTCCATGCAAACCATGCCTT...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CAA 72 bp TTTTCTCCAGAAGATTCAGCCCTAACAGCTGCCACCTaGAAGGATGTATTTCACTGTCACAGGAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FSPEDSALTAAT*KDVFHCHRKQP
Trigger: TGGCTGCTTCCTGTGACAGTGAAATACATCCTTCAAGGTGGCAGCTGTTAGGGCTGAATCTTCTGGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CAA 72 bp GATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTaGTGTAATACCTGGGTAGTTTCTCTTGAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: DSLERRPCSHFG*CNTWVVSLESV
Trigger: GACAGACTCAAGAGAAACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCTTTTTGAGTCAAGGCTaGACACTCGATGTAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLFLSQG*TLDVGG
Trigger: GCCTCCTACATCGAGTGTTCAGCCTTGACTCAAAAA...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGCTGGGTAGTTTCTCTTaGGTCTGTCAAGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRLGSFS*VCQAEN
Trigger: GTTCTCTGCTTGACAGACTCAAGAGAAACTACCCAG...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTCTTCCACCAGGACTTaGAGAGGTTTTTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: VRHQVTIVWREGLAPILASSTRT*RGFSFY
Trigger: ATAAAATGAAAAACCTCTCCAAGTCCTGGTGGAAGA...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAGAACTATTGTTACCATaGTTGACCTGTGTACATAAT +
Preference number: 4 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRELLLP*LTCVHN
Trigger: ATTATGTACACAGGTCAACCATGGTAACAATAGTTC...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCGCCGAAGAGACAGCTTaGGTATGGAGGTTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLAEETA*VWRFKN
Trigger: GTTTTTAAACCTCCATACTCAAGCTGTCTCTTCGGC...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp CAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTGCTCTTCTGTACATTATAATCCAGGCGCGGCAAGATaGGACTGTATTCAGTTAGGT +
Preference number: 4 (lower is better)
Translates to: QERVNHSVPPFCSSVHYNPGAAR*DCIQLG
Trigger: ACCTAACTGAATACAGTCTCATCTTGCCGCGCCTGG...ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp CAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTGCTCTTCTGTACATTATAATACAGGTGCTCCCTGTTaGCCTCGTTACCTAGGATTG +
Preference number: 4 (lower is better)
Translates to: QERVNHSVPPFCSSVHYNTGAPC*PRYLGL
Trigger: CAATCCTAGGTAACGAGGGCAACAGGGAGCACCTGT...ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCGCTTTTAGACTTCTTTaGCTGTTGCTGAGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLAFRLL*LLLSVR
Trigger: TCGGACACTCAGCAACAGCCAAAGAAGTCTAAAAGC...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTACAAACACTTGCTGTTaGCCTTTCAAGAGTATTCAC +
Preference number: 4 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVTNTCC*PFKSIH
Trigger: GTGAATACTCTTGAAAGGCCAACAGCAAGTGTTTGT...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGGCTATTCTCCTGAGATaGCACCTTTTTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRAILLR*HLFLQK
Trigger: CTTCTGGAGAAAAAGGTGCCATCTCAGGAGAATAGC...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CAA 72 bp CTACTGACCAACACTTGCTTTCCTCCGCATAGCACTTaGTCTGTGTTCATATGTGTCAACACAACTGGACTA +
Preference number: 4 (lower is better)
Translates to: LLTNTCFPPHST*SVFICVNTTGL
Trigger: TAGTCCAGTTGTGTTGACACATATGAACACAGACAAAGTGCTATGCGGAGGAAAGCAAGTGTTGGTCAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
3UTR CAA 72 bp AAAATTATCTGTGTTGTGTCCCACAAACACTTGCTGTaGGCCTTTCAAGAGTATTCACCTCCCTGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: KIICVVSHKHLL*AFQEYSPPCRR
Trigger: TCTTCGGCAGGGAGGTGAATACTCTTGAAAGGCCAACAGCAAGTGTTTGTGGGACACAACACAGATAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGTCCCCATTAATGGTGTaGAAGTCTGAATCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRSPLMV*KSESTA
Trigger: TGCTGTTGATTCAGACTTTCACACCATTAATGGGGA...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCTGCTTCAGGAAACTATaGCCGACATCAATTCCAATG +
Preference number: 4 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLCFRKL*PTSIPM
Trigger: CATTGGAATTGATGTCGGTCATAGTTTCCTGAAGCA...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR GCA 90 bp CAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTGCTCTTCTGTACATTATAATAACAATCCAGACAGGTaGTCCCTGTTGCCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: QERVNHSVPPFCSSVHYNNNPDR*SLLPSL
Trigger: TAACGAGGGCAACAGGGAGCACCTGTCTGGATTGTT...ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR TCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGAATGGTGTGAAAGTCTaGATCAACAGCAAATACAGC +
Preference number: 4 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRNGVKV*INSKYS
Trigger: GCTGTATTTGCTGTTGATTCAGACTTTCACACCATT...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTGAACTATTGTTACCATaGTTGACCTGTGTACATAAT +
Preference number: 4 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVELLLP*LTCVHN
Trigger: ATTATGTACACAGGTCAACCATGGTAACAATAGTTC...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CCA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGAAGGCATGGTTTGCATaGAGTTTCAAAGCTAAGAAC +
Preference number: 4 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRKAWFA*SFKAKN
Trigger: GTTCTTAGCTTTGAAACTCCATGCAAACCATGCCTT...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS GCA 90 bp GCCAGGGAGGGTCGTGGCTCCGCGCTCCGGCGGCGCCAGCCGCTCTaGCCTGCGCTGTTGGAGGACAGCGGTCCGAGCGCCGTGGATCCC +
Preference number: 5 (lower is better)
Translates to: AREGRGSALRRRQPL*PALLEDSGPSAVDP
Trigger: GGGATCCACGGCGCTCGGACCGCTGTCCTCCAACAGCGCAGGGCAGAGCGGCTGGCGCCGCCGGAGCGCGGAGCCACGACCCTCCCTGGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS GCA 90 bp GGAGGGTCGTGGCTCCGCGCTCCGGCGGCGCCAGCCGCTCTGCCCTaGGCTGTTGGAGGACAGCGGTCCGAGCGCCGTGGATCCCAAGCG +
Preference number: 5 (lower is better)
Translates to: GGSWLRAPAAPAALP*AVGGQRSERRGSQA
Trigger: CGCTTGGGATCCACGGCGCTCGGACCGCTGTCCTCCAACAGCGCAGGGCAGAGCGGCTGGCGCCGCCGGAGCGCGGAGCCACGACCCTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS CCA 90 bp TTCCGGGCCGCACGGCCAGTAGACAAAGGCGGCCAGGGAGGGTCGTaGCTCCGCGCTCCGGCGGCGCCAGCCGCTCTGCCCTGCGCTGTT +
Preference number: 5 (lower is better)
Translates to: FRAARPVDKGGQGGS*LRAPAAPAALPCAV
Trigger: AACAGCGCAGGGCAGAGCGGCTGGCGCCGCCGGAGCGCGGAGCCACGACCCTCCCTGGCCGCCTTTGTCTACTGGCCGTGCGGCCCGGAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS CCA 90 bp GGAGCTGTCACCGACAGCTGCGGGCGCGTCCCCGGCCCTGGAGAGTaGCGGTTCCGGGCCGCACGGCCAGTAGACAAAGGCGGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: GAVTDSCGRVPGPGE*RFRAARPVDKGGQG
Trigger: TCCCTGGCCGCCTTTGTCTACTGGCCGTGCGGCCCGGAACCGCCACTCTCCAGGGCCGGGGACGCGCCCGCAGCTGTCGGTGACAGCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGCCGACCAGCACGCACTaGACGCCGCGCCCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLPTSTH*TPRPSA
Trigger: TGCCGAGGGGCGCGGCGTCAAGTGCGTGCTGGTCGG...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAGGCAGTGTCACAGAGTaGGAGTCTCACGGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: TASPTLQLSVQAALWCLGGSVTE*ESHGPP
Trigger: GGGCGGCCCGTGAGACTCCAACTCTGTGACACTGCC...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGACCACCGCGGAGAAGTaGTCGAAGGCAGTAGGGATG +
Preference number: 5 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLTTAEK*SKAVGM
Trigger: CATCCCTACTGCCTTCGACAACTTCTCCGCGGTGGT...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCTCTGCCCTGCGCTGTaGGAGGACAGCGGTCCGAGC +
Preference number: 5 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSLCPAL*EDSGPS
Trigger: GCTCGGACCGCTGTCCTCCAACAGCGCAGGGCAGAG...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTCTGAGTGTCCGAGTATaGAATGCCAGCGACGATGGC +
Preference number: 5 (lower is better)
Translates to: LWVTHRKPDPATECSGCLLSVRV*NASDDG
Trigger: GCCATCGTCGCTGGCATTCAATACTCGGACACTCAG...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCGGCAGTGTCACAGAGTaGGAGTCTCACGGGCCGCCC +
Preference number: 5 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSGSVTE*ESHGPP
Trigger: GGGCGGCCCGTGAGACTCCAACTCTGTGACACTGCC...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGACTGAGTGTCCGAGTATaGAATGCCAGCGACGATGGC +
Preference number: 5 (lower is better)
Translates to: TASPTLQLSVQAALWCLGLSVRV*NASDDG
Trigger: GCCATCGTCGCTGGCATTCAATACTCGGACACTCAG...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAGACAGGTGCTCCCTGTaGCCCTCGTTACCTAGGATT +
Preference number: 5 (lower is better)
Translates to: TASPTLQLSVQAALWCLGDRCSL*PSLPRI
Trigger: AATCCTAGGTAACGAGGGCAACAGGGAGCACCTGTC...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGGTTGTGGATGTGACTTaGGTGGCTCTGGGTCACCCA +
Preference number: 5 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTVVDVT*VALGHP
Trigger: TGGGTGACCCAGAGCCACCAAAGTCACATCCACAAC...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGGCCTTGCTCCCATTTaGGCTTGTGTAATACCTGGG +
Preference number: 5 (lower is better)
Translates to: LWVTHRKPDPATECSGCLGLAPI*ACVIPG
Trigger: CCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCC...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGTCTGGAGAGAAGGCCTaGCTCCCATTTTGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLSGEKA*LPFWLV
Trigger: CACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGA...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGTCCGCGAGCGCGGGCTaGCGGTCGCGGGCTAGCAGG +
Preference number: 5 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRSASAG*RSRASR
Trigger: CCTGCTAGCCCGCGACCGCAAGCCCGCGCTCGCGGA...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGCAGAGAGGCCTCAGCTaGTCAAATTCATCCTGTCCG +
Preference number: 5 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLQRGLS*SNSSCP
Trigger: CGGACAGGATGAATTTGACAAGCTGAGGCCTCTCTG...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGACAGAGAGGCCTCAGCTaGTCAAATTCATCCTGTCCG +
Preference number: 5 (lower is better)
Translates to: TASPTLQLSVQAALWCLGQRGLS*SNSSCP
Trigger: CGGACAGGATGAATTTGACAAGCTGAGGCCTCTCTG...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGTCCCACAAACACTaGCTGTTGGCCTTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: LWVTHRKPDPATECSGCLVSHKH*LLAFQE
Trigger: CTCTTGAAAGGCCAACAGCAAGTGTTTGTGGGACAC...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGAGTGTTCAGGCTGCCTaGTGGTGTCTCGGAAGCATT +
Preference number: 5 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLSVQAA*WCLGSI
Trigger: AATGCTTCCGAGACACCACAAGGCAGCCTGAACACT...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGTCTGGAGAGAAGGCCTaGCTCCCATTTTGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLSGEKA*LPFWLV
Trigger: CACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGA...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGCCGACCAGCACGCACTaGACGCCGCGCCCCTCGGCA +
Preference number: 5 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRPTSTH*TPRPSA
Trigger: TGCCGAGGGGCGCGGCGTCAAGTGCGTGCTGGTCGG...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTAGACTTCTTTGGCTGTaGCTGAGTGTCCGAGTATTG +
Preference number: 5 (lower is better)
Translates to: LWVTHRKPDPATECSGCLRLLWL*LSVRVL
Trigger: CAATACTCGGACACTCAGCAACAGCCAAAGAAGTCT...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGACCTCCGCATAGCACTTaGTCTGTGTTCATATGTGTC +
Preference number: 5 (lower is better)
Translates to: TASPTLQLSVQAALWCLGPPHST*SVFICV
Trigger: GACACATATGAACACAGACAAAGTGCTATGCGGAGG...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGGCTGCTAACAGCTGCCACCTaGAAGGATGTATTTCACTGT +
Preference number: 5 (lower is better)
Translates to: CHRKQPSMGAMVPACTWLLTAAT*KDVFHC
Trigger: ACAGTGAAATACATCCTTCAAGGTGGCAGCTGTTAG...CAGCCAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CTCTGGGTCACCCACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTTGCTCCCATTTTGGCTaGTGTAATACCTGGGTAGTT +
Preference number: 5 (lower is better)
Translates to: LWVTHRKPDPATECSGCLCSHFG*CNTWVV
Trigger: AACTACCCAGGTATTACACAAGCCAAAATGGGAGCA...AAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGTGGGTGACCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCAGGATGATGGGGGCTTaGGGACAGTGGCATCGAATC +
Preference number: 5 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSRMMGA*GQWHRI
Trigger: GATTCGATGCCACTGTCCCAAAGCCCCCATCATCCT...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAAGCATTCCTACCAGAAGGATGATGGGGGCTTaGGGACAGTGGCATCGAATC +
Preference number: 5 (lower is better)
Translates to: LQLSVQAALWCLGSIPTRRMMGA*GQWHRI
Trigger: GATTCGATGCCACTGTCCCAAAGCCCCCATCATCCT...TCTGGTAGGAATGCTTCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGAACAAAAGTGACTGGTTaGAGGTTTTGTAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: TASPTLQLSVQAALWCLGTKVTG*RFCRQR
Trigger: CCTCTGCCTACAAAACCTCAAACCAGTCACTTTTGT...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS TCA 90 bp GCATCGAATCTCCGGCACCCATTTCTCACTGACGTTCTGGAAGGATaGGGGGCTCACGACACTGAAGCAGAGCAGGAAGATGTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: ASNLRHPFLTDVLEG*GAHDTEAEQEDVCV
Trigger: AACACAGACATCTTCCTGCTCTGCTTCAGTGTCGTGAGCCCCTCATCCTTCCAGAACGTCAGTGAGAAATGGGTGCCGGAGATTCGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GGTGTGGAAGTCCCCTCCAGGGAGACCAACTGCAGCCCCATACACTGTCACACGGGCTTTTCTTTGCATTaGTCCAACTCAATGAGGACT +
Preference number: 5 (lower is better)
Translates to: GVEVPSRETNCSPIHCHTGFSLH*SNSMRT
Trigger: AGTCCTCATTGAGTTGGACAAATGCAAAGAAAAGCC...CGTGTGACAGTGTATGGGGCTGCAGTTGGTCTCCCTGGAGGGGACTTCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGACACAAACACTTGCTGTaGGCCTTTCAAGAGTATTCA +
Preference number: 5 (lower is better)
Translates to: TASPTLQLSVQAALWCLGHKHLL*AFQEYS
Trigger: TGAATACTCTTGAAAGGCCAACAGCAAGTGTTTGTG...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TCACTGTCACAGGAAGCAGCCAAGTATGGGGGCCATGGTCCCGGCATGCACCTGCACAAACACTTGCTGTaGGCCTTTCAAGAGTATTCA +
Preference number: 5 (lower is better)
Translates to: SLSQEAAKYGGHGPGMHLHKHLL*AFQEYS
Trigger: TGAATACTCTTGAAAGGCCAACAGCAAGTGTTTGTG...CAGGTGCATGCCGGGACCATGGCCCCCATACTTGGCTGCTTCCTGTGACAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp ACCGCAAGCCCGACCCTGCAACTGAGTGTTCAGGCTGCCTTGTGGTGTCTCGGATTCTTCCACCAGGACTaGGAGAGGTTTTTCATTTTA +
Preference number: 5 (lower is better)
Translates to: TASPTLQLSVQAALWCLGFFHQD*ERFFIL
Trigger: TAAAATGAAAAACCTCTCCAAGTCCTGGTGGAAGAA...TCCGAGACACCACAAGGCAGCCTGAACACTCAGTTGCAGGGTCGGGCTTGCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTAGTGTTCAGGCTGCCTaGTGGTGTCTCGGAAGCATT +
Preference number: 5 (lower is better)
Translates to: VRHQVTIVWREGLAPILASVQAA*WCLGSI
Trigger: AATGCTTCCGAGACACCACAAGGCAGCCTGAACACT...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTGGCCTTGCTCCCATTTaGGCTTGTGTAATACCTGGG +
Preference number: 5 (lower is better)
Translates to: VRHQVTIVWREGLAPILAGLAPI*ACVIPG
Trigger: CCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCC...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTGCTCTTCTGTACATTATAATCTCTGCCCTGCGCTGTaGGAGGACAGCGGTCCGAGC +
Preference number: 5 (lower is better)
Translates to: QERVNHSVPPFCSSVHYNLCPAL*EDSGPS
Trigger: GCTCGGACCGCTGTCCTCCAACAGCGCAGGGCAGAG...ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS CCA 90 bp GGCTTTGATTTCCTCGGCGCACAGCTTAGCCGCCTCTTCAGGCACTaGCTTTTCTTTGCATTTGTCCAACTCAATGAGGACTTTGACATC +
Preference number: 5 (lower is better)
Translates to: GFDFLGAQLSRLFRH*LFFAFVQLNEDFDI
Trigger: GATGTCAAAGTCCTCATTGAGTTGGACAAATGCAAAGAAAAGCCAGTGCCTGAAGAGGCGGCTAAGCTGTGCGCCGAGGAAATCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTAGACTTCTTTGGCTGTaGCTGAGTGTCCGAGTATTG +
Preference number: 5 (lower is better)
Translates to: VRHQVTIVWREGLAPILARLLWL*LSVRVL
Trigger: CAATACTCGGACACTCAGCAACAGCCAAAGAAGTCT...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GCACAACTTGGTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCACAAAAGTGACTGGTTaGAGGTTTTGTAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: AQLGKAPGYDSLERRPCSTKVTG*RFCRQR
Trigger: CCTCTGCCTACAAAACCTCAAACCAGTCACTTTTGT...GGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCGTTGTGGATGTGACTTaGGTGGCTCTGGGTCACCCA +
Preference number: 5 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLVVDVT*VALGHP
Trigger: TGGGTGACCCAGAGCCACCAAAGTCACATCCACAAC...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GTAAGGCACCAGGTTACGATAGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGCTCCCATTTTGGCTaGTGTAATACCTGGGTAGTT +
Preference number: 5 (lower is better)
Translates to: VRHQVTIVWREGLAPILACSHFG*CNTWVV
Trigger: AACTACCCAGGTATTACACAAGCCAAAATGGGAGCA...AGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTCCTCCGCATAGCACTTaGTCTGTGTTCATATGTGTC +
Preference number: 5 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVPPHST*SVFICV
Trigger: GACACATATGAACACAGACAAAGTGCTATGCGGAGG...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGCCTCGTTACCTAGGATaGAGGCAGTTTGGTGCACGT +
Preference number: 5 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRPRYLG*RQFGAR
Trigger: ACGTGCACCAAACTGCCTCAATCCTAGGTAACGAGG...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTGCTCTTCTGTACATTATAATACCACCGCGGAGAAGTaGTCGAAGGCAGTAGGGATG +
Preference number: 5 (lower is better)
Translates to: QERVNHSVPPFCSSVHYNTTAEK*SKAVGM
Trigger: CATCCCTACTGCCTTCGACAACTTCTCCGCGGTGGT...ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp AGTCTGGAGAGAAGGCCTTGCTCCCATTTTGGCTTGTGTAATACCTGGGTAGTTGGCTTTTCTTTGCATTaGTCCAACTCAATGAGGACT +
Preference number: 5 (lower is better)
Translates to: SLERRPCSHFGLCNTWVVGFSLH*SNSMRT
Trigger: AGTCCTCATTGAGTTGGACAAATGCAAAGAAAAGCC...AACTACCCAGGTATTACACAAGCCAAAATGGGAGCAAGGCCTTCTCTCCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCACAGAAAAGCACAACTaGGTAAGGCACCAGGTTACG +
Preference number: 5 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLTEKHN*VRHQVT
Trigger: CGTAACCTGGTGCCTTACCAAGTTGTGCTTTTCTGT...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTGCTCTTCTGTACATTATAATCCTCGTTACCTAGGATaGAGGCAGTTTGGTGCACGT +
Preference number: 5 (lower is better)
Translates to: QERVNHSVPPFCSSVHYNPRYLG*RQFGAR
Trigger: ACGTGCACCAAACTGCCTCAATCCTAGGTAACGAGG...ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTGCTCTTCTGTACATTATAATGTGTCCCACAAACACTaGCTGTTGGCCTTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: QERVNHSVPPFCSSVHYNVSHKH*LLAFQE
Trigger: CTCTTGAAAGGCCAACAGCAAGTGTTTGTGGGACAC...ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp GGCAGTTTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCTTCTTCCACCAGGACTaGGAGAGGTTTTTCATTTTA +
Preference number: 5 (lower is better)
Translates to: GSLVHVLQYRKQMSLSDLFFHQD*ERFFIL
Trigger: TAAAATGAAAAACCTCTCCAAGTCCTGGTGGAAGAA...GAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAAACTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp TTGGTGCACGTATTACAGTACCGAAAGCAAATGTCACTTTCTGATCTCCACAGGCTATTGTTACCATGGTaGACCTGTGTACATAATGCA +
Preference number: 5 (lower is better)
Translates to: LVHVLQYRKQMSLSDLHRLLLPW*TCVHNA
Trigger: TGCATTATGTACACAGGTCAACCATGGTAACAATAG...CCTGTGGAGATCAGAAAGTGACATTTGCTTTCGGTACTGTAATACGTGCACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS-3UTR CAA 90 bp CAAGAGAGGGTTAACCATAGTGTTCCTCCCTTTTGCTCTTCTGTACATTATAATACAGAAAAGCACAACTaGGTAAGGCACCAGGTTACG +
Preference number: 5 (lower is better)
Translates to: QERVNHSVPPFCSSVHYNTEKHN*VRHQVT
Trigger: CGTAACCTGGTGCCTTACCAAGTTGTGCTTTTCTGT...ATTATAATGTACAGAAGAGCAAAAGGGAGGAACACTATGGTTAACCCTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS GCA 72 bp GGTCGTGGCTCCGCGCTCCGGCGGCGCCAGCCGCTCTaGCCTGCGCTGTTGGAGGACAGCGGTCCGAGCGCC +
Preference number: 6 (lower is better)
Translates to: GRGSALRRRQPL*PALLEDSGPSA
Trigger: GGCGCTCGGACCGCTGTCCTCCAACAGCGCAGGGCAGAGCGGCTGGCGCCGCCGGAGCGCGGAGCCACGACC
78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS GCA 72 bp TGGCTCCGCGCTCCGGCGGCGCCAGCCGCTCTGCCCTaGGCTGTTGGAGGACAGCGGTCCGAGCGCCGTGGA +
Preference number: 6 (lower is better)
Translates to: WLRAPAAPAALP*AVGGQRSERRG
Trigger: TCCACGGCGCTCGGACCGCTGTCCTCCAACAGCGCAGGGCAGAGCGGCTGGCGCCGCCGGAGCGCGGAGCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS CCA 72 bp GCACGGCCAGTAGACAAAGGCGGCCAGGGAGGGTCGTaGCTCCGCGCTCCGGCGGCGCCAGCCGCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: ARPVDKGGQGGS*LRAPAAPAALP
Trigger: GGGCAGAGCGGCTGGCGCCGCCGGAGCGCGGAGCCACGACCCTCCCTGGCCGCCTTTGTCTACTGGCCGTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS TCA 72 bp CTCCGGCACCCATTTCTCACTGACGTTCTGGAAGGATaGGGGGCTCACGACACTGAAGCAGAGCAGGAAGAT +
Preference number: 6 (lower is better)
Translates to: LRHPFLTDVLEG*GAHDTEAEQED
Trigger: ATCTTCCTGCTCTGCTTCAGTGTCGTGAGCCCCTCATCCTTCCAGAACGTCAGTGAGAAATGGGTGCCGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS CAA 72 bp TTTAGACTTCTTTGGCTGTTGCTGAGTGTCCGAGTATaGAATGCCAGCGACGATGGCTGCATCAAAGACCTC +
Preference number: 6 (lower is better)
Translates to: FRLLWLLLSVRV*NASDDGCIKDL
Trigger: GAGGTCTTTGATGCAGCCATCGTCGCTGGCATTCAATACTCGGACACTCAGCAACAGCCAAAGAAGTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS CAA 90 bp AGTCCTGCTTTTAGACTTCTTTGGCTGTTGCTGAGTGTCCGAGTATaGAATGCCAGCGACGATGGCTGCATCAAAGACCTCTTTGAGGTT +
Preference number: 6 (lower is better)
Translates to: SPAFRLLWLLLSVRV*NASDDGCIKDLFEV
Trigger: AACCTCAAAGAGGTCTTTGATGCAGCCATCGTCGCTGGCATTCAATACTCGGACACTCAGCAACAGCCAAAGAAGTCTAAAAGCAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS CAA 90 bp TCAGGCACTGGCTTTTCTTTGCATTTGTCCAACTCAATGAGGACTTaGACATCTTCTCTGAGATCCGACTGCGTTCCAACTAGGATGATG +
Preference number: 6 (lower is better)
Translates to: SGTGFSLHLSNSMRT*TSSLRSDCVPTRMM
Trigger: CATCATCCTAGTTGGAACGCAGTCGGATCTCAGAGAAGATGTCAAAGTCCTCATTGAGTTGGACAAATGCAAAGAAAAGCCAGTGCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS CCA 72 bp TTTCATTTTATCTGGAGTCCTGCTTTTAGACTTCTTTaGCTGTTGCTGAGTGTCCGAGTATTGAATGCCAGC +
Preference number: 6 (lower is better)
Translates to: FHFIWSPAFRLL*LLLSVRVLNAS
Trigger: GCTGGCATTCAATACTCGGACACTCAGCAACAGCCAAAGAAGTCTAAAAGCAGGACTCCAGATAAAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2
CDS CAA 72 bp TATCGATTTCATCTGAAAATAGCCTTTCTGGGTGTCTaGCCAGCATCATACGAAACAGCAGTACTTCTTCCA +
Preference number: 6 (lower is better)
Translates to: YRFHLKIAFLGV*PASYETAVLLP
Trigger: TGGAAGAAGTACTGCTGTTTCGTATGATGCTGGCAAGACACCCAGAAAGGCTATTTTCAGATGAAATCGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366691.4
ENST00000646945.2