RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RGS22 (Homo sapiens)

Ensembl gene IDs: ENSG00000132554

Ensembl transcript IDs: ENST00000360863.11, ENST00000517769.5, ENST00000517828.5, ENST00000517843.5, ENST00000518474.1, ENST00000519092.5, ENST00000519408.5, ENST00000519421.1, ENST00000519725.5, ENST00000520117.5, ENST00000520923.5, ENST00000522064.5, ENST00000523287.5, ENST00000523437.5, ENST00000523600.1, ENST00000524182.1, ENST00000617334.1

Found 444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCAAGAGGGTTGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTaGTTTTGCTTGACGGAGGTGCCAGAATTTCAGTTCAGCACTAGC +
Preference number: 1 (lower is better)
Translates to: WQEGCHLWKRVNILP*FCLTEVPEFQFSTS
Trigger: GCTAGTGCTGAACTGAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCCTCTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR GCA 90 bp GAGGGTTGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTaGTTGACGGAGGTGCCAGAATTTCAGTTCAGCACTAGCATATTT +
Preference number: 1 (lower is better)
Translates to: EGCHLWKRVNILPWF*LTEVPEFQFSTSIF
Trigger: AAATATGCTAGTGCTGAACTGAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR TCA 90 bp AGCTGGGGCTTGAGACATTCAGAAATGTCAGTAAAAGATGTTAAATaGATGACTTTGCTGCTTTCTGACATGTACTTTGACCCTTTCTCA +
Preference number: 1 (lower is better)
Translates to: SWGLRHSEMSVKDVK*MTLLLSDMYFDPFS
Trigger: TGAGAAAGGGTCAAAGTACATGTCAGAAAGCAGCAAAGTCATTCATTTAACATCTTTTACTGACATTTCTGAATGTCTCAAGCCCCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR TCA 90 bp AAGAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCACAAGGCACCAACATCTaGCACGGTTTTAACCCTAGG +
Preference number: 2 (lower is better)
Translates to: KSGRRSNVCGKKILRLLAQGTNI*HGFNPR
Trigger: CCTAGGGTTAAAACCGTGTCAGATGTTGGTGCCTTG...TGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR TCA 90 bp CCTAGGTTCTTCTGTATAAGCGTATCTTCTATCCAGCTGGGGCTTGAGACATTCTTCCTTGGTTTTGCTTaGCGGAGGTGCCAGAATTTC +
Preference number: 2 (lower is better)
Translates to: PRFFCISVSSIQLGLETFFLGFA*RRCQNF
Trigger: GAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAA...GAATGTCTCAAGCCCCAGCTGGATAGAAGATACGCTTATACAGAAGAACCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR TCA 90 bp GTCAAGAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTCCACAACTTGTTCCCTaGATGCTCGCAGAATTTAGT +
Preference number: 2 (lower is better)
Translates to: VKSGRRSNVCGKKILRLLPQLVP*MLAEFS
Trigger: ACTAAATTCTGCGAGCATTCAGGGAACAAGTTGTGG...AAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTCTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CCA 90 bp ATCATCCTTAGAAGAACCTGGATACAAAAGCTCCCGCTTCCAAGGCTTTTGAGTGTAATCCCAGTATTTTaGGAAGCCATGGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: IILRRTWIQKLPLPRLLSVIPVF*EAMVGG
Trigger: TCCTCCCACCATGGCTTCCCAAAATACTGGGATTAC...ACTCAAAAGCCTTGGAAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CCA 90 bp CTCAATCACATCATCCTTAGAAGAACCTGGATACAAAAGCTCCCGCTTCCAAGGGTCAATATCCTTCCTTaGTTTTGCTTGACGGAGGTG +
Preference number: 2 (lower is better)
Translates to: LNHIILRRTWIQKLPLPRVNILP*FCLTEV
Trigger: CACCTCCGTCAAGCAAAACCAAGGAAGGATATTGAC...CCTTGGAAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGATGTGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CCA 90 bp AAGAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCAGTGGAATGCAAGATTTaGGTCTTAATGGCAAGAGGG +
Preference number: 2 (lower is better)
Translates to: KSGRRSNVCGKKILRLLAVECKI*VLMARG
Trigger: CCCTCTTGCCATTAAGACCCAAATCTTGCATTCCAC...TGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR GCA 90 bp GCTGAAGTGTTTCTTGGTAGAAAAGCTGATGATAAGCCTGCAGGTCAAACCAAAATCCTTCCTTGGTTTTaGTTGACGGAGGTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: AEVFLGRKADDKPAGQTKILPWF*LTEVPE
Trigger: TTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGAT...TTTGGTTTGACCTGCAGGCTTATCATCAGCTTTTCTACCAAGAAACACTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR CAA 90 bp CAGGTATCTGTGGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTaGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTGCTT +
Preference number: 2 (lower is better)
Translates to: QVSVECKIWVLMARG*PFVEKGQYPSLVLL
Trigger: AAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CCA 90 bp GGTAGAAAAGCTGATGATAAGCCTGCAGGTCAAACCAAAAGTACACACTGTTCTGATCTCAGGTATCTGTaGAATGCAAGATTTGGGTCT +
Preference number: 2 (lower is better)
Translates to: GRKADDKPAGQTKSTHCSDLRYL*NARFGS
Trigger: AGACCCAAATCTTGCATTCCACAGATACCTGAGATC...AGAACAGTGTGTACTTTTGGTTTGACCTGCAGGCTTATCATCAGCTTTTCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CCA 90 bp GCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCATACTTTATATCTTCTATCCAGCTaGGGCTTGAGACATTCAGAA +
Preference number: 2 (lower is better)
Translates to: AEGATYVAKRYCACLHTLYLLSS*GLRHSE
Trigger: TTCTGAATGTCTCAAGCCCCAGCTGGATAGAAGATA...TAAAGTATGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR TCA 90 bp GCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCATACTTTATTTGTTGAGGCTGAATaGGTAACACAGAATCTTGGT +
Preference number: 2 (lower is better)
Translates to: AEGATYVAKRYCACLHTLFVEAE*VTQNLG
Trigger: ACCAAGATTCTGTGTTACTCATTCAGCCTCAACAAA...TAAAGTATGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CCA 90 bp TTGGGAGATTTAGGAGGTTGTGATAAGCTGAATTCTTCTTTCTGGATCTCAGGTAGTAACACAGAATCTTaGTGCCCTGTAATCCCAGTA +
Preference number: 2 (lower is better)
Translates to: LGDLGGCDKLNSSFWISGSNTES*CPVIPV
Trigger: TACTGGGATTACAGGGCACCAAGATTCTGTGTTACT...ACCTGAGATCCAGAAAGAAGAATTCAGCTTATCACAACCTCCTAAATCTCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CCA 90 bp GCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCATACTTTACTGAATTCTTCTTTCTaGATCTCAGGTATCTGTGGA +
Preference number: 2 (lower is better)
Translates to: AEGATYVAKRYCACLHTLLNSSF*ISGICG
Trigger: TCCACAGATACCTGAGATCCAGAAAGAAGAATTCAG...TAAAGTATGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR GCA 90 bp GGTAGAAAAGCTGATGATAAGCCTGCAGGTCAAACCAAAAGTACACACTGTTCTAACTTGTTCCCTGAATaGTCGCAGAATTTAGTAAAG +
Preference number: 2 (lower is better)
Translates to: GRKADDKPAGQTKSTHCSNLFPE*SQNLVK
Trigger: CTTTACTAAATTCTGCGAGCATTCAGGGAACAAGTT...AGAACAGTGTGTACTTTTGGTTTGACCTGCAGGCTTATCATCAGCTTTTCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR CAA 90 bp GAATTTAGTAAAGAAGAATCCAGCTCTATTTTCTACATACAAAGATaGCAACAAATTTTCCATGTCAGATCCTCCCAAGGCACCAACATC +
Preference number: 2 (lower is better)
Translates to: EFSKEESSSIFYIQR*QQIFHVRSSQGTNI
Trigger: GATGTTGGTGCCTTGGGAGGATCTGACATGGAAAATTTGTTGCAATCTTTGTATGTAGAAAATAGAGCTGGATTCTTCTTTACTAAATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR GCA 90 bp TTTACTTCAGGTGATTTATTGGGAGATTTAGGAGGTTGTGATAAGCTGAATTCTCAGGTATCTGTGGAATaGAAGATTTGGGTCTTAATG +
Preference number: 2 (lower is better)
Translates to: FTSGDLLGDLGGCDKLNSQVSVE*KIWVLM
Trigger: CATTAAGACCCAAATCTTGCATTCCACAGATACCTG...AGAATTCAGCTTATCACAACCTCCTAAATCTCCCAATAAATCACCTGAAGTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CAA 90 bp GGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCATTTGTGGAAAAGGGCTTCCTTGGTTTTGCTaGACGGAGGTGCCAGAATTT +
Preference number: 3 (lower is better)
Translates to: GMQDLGLNGKRVAICGKGLPWFC*TEVPEF
Trigger: AAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAG...CCCTTTTCCACAAATGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CAA 90 bp GAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCATAGGTCAATATCCTTCCTaGGTTTTGCTTGACGGAGGT +
Preference number: 3 (lower is better)
Translates to: EWQKEQRMWQKDIALACIGQYPS*VLLDGG
Trigger: ACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACC...TATGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CAA 90 bp AAGAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCACAAGAGGGTTGCCATTaGTGGAAAAGGGTCAATATC +
Preference number: 3 (lower is better)
Translates to: KSGRRSNVCGKKILRLLAQEGCH*WKRVNI
Trigger: GATATTGACCCTTTTCCACAAATGGCAACCCTCTTG...TGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CAA 90 bp CTCAATCACATCATCCTTAGAAGAACCTGGATACAAAAGCTCCCGCTTCCAAGGTGTGGAATGCAAGATTaGGGTCTTAATGGCAAGAGG +
Preference number: 3 (lower is better)
Translates to: LNHIILRRTWIQKLPLPRCGMQD*GLNGKR
Trigger: CCTCTTGCCATTAAGACCCAAATCTTGCATTCCACA...CCTTGGAAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGATGTGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR TCA 72 bp TGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTGCTTaGCGGAGGTGCCAGAATTTCAGTTCAGCACTAGCA +
Preference number: 3 (lower is better)
Translates to: CGKGSISFLGFA*RRCQNFSSALA
Trigger: TGCTAGTGCTGAACTGAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CAA 90 bp CCCTTTCTCAATCACATCATCCTTAGAAGAACCTGGATACAAAAGCTCCCGCTTTTAATGGCAAGAGGGTaGCCATTTGTGGAAAAGGGT +
Preference number: 3 (lower is better)
Translates to: PFLNHIILRRTWIQKLPLLMARG*PFVEKG
Trigger: ACCCTTTTCCACAAATGGCAACCCTCTTGCCATTAA...AAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGATGTGATTGAGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR TCA 72 bp ATTTTCCATGTCAGATCCTCCCAAGGCACCAACATCTaGCACGGTTTTAACCCTAGGTTCTTCTGTATAAGC +
Preference number: 3 (lower is better)
Translates to: IFHVRSSQGTNI*HGFNPRFFCIS
Trigger: GCTTATACAGAAGAACCTAGGGTTAAAACCGTGTCAGATGTTGGTGCCTTGGGAGGATCTGACATGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR GCA 72 bp CATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTaGTTGACGGAGGTGCCAGAATTTCAGTTCAGCACT +
Preference number: 3 (lower is better)
Translates to: HLWKRVNILPWF*LTEVPEFQFST
Trigger: AGTGCTGAACTGAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR CCA 72 bp CTTTCTGGATCTCAGGTATCTGTGGAATGCAAGATTTaGGTCTTAATGGCAAGAGGGTTGCCATTTGTGGAA +
Preference number: 3 (lower is better)
Translates to: LSGSQVSVECKI*VLMARGLPFVE
Trigger: TTCCACAAATGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTGAGATCCAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CAA 90 bp AAGAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCAACTTCAGGTGATTTATaGGGAGATTTAGGAGGTTGT +
Preference number: 3 (lower is better)
Translates to: KSGRRSNVCGKKILRLLATSGDL*GDLGGC
Trigger: ACAACCTCCTAAATCTCCCAATAAATCACCTGAAGT...TGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGGTTTAAAGAATTCCTaGAACCTATCAGCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTGLKNS*NLSAAG
Trigger: TCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GCAAGAGGGTTGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTGCTTGCCTCTTCTCGGGCATaGCGTCCCCGCTGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: ARGLPFVEKGQYPSLVLLASSRA*RPRCPR
Trigger: GCGCGGGCAGCGGGGACGGCATGCCCGAGAAGAGGC...AAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCCTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR GCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGCCTCTTCTCGGGCATaGCGTCCCCGCTGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSASSRA*RPRCPR
Trigger: GCGCGGGCAGCGGGGACGGCATGCCCGAGAAGAGGC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGCCTCTTCTCGGGCATaGCGTCCCCGCTGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTASSRA*RPRCPR
Trigger: GCGCGGGCAGCGGGGACGGCATGCCCGAGAAGAGGC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCATTTGTGGAAAAGGGTACACCAGTCCGCCCTaGTCTCTGGTCCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: GMQDLGLNGKRVAICGKGYTSPP*SLVQRS
Trigger: AGAGCGCTGGACCAGAGAGCAGGGCGGACTGGTGTA...CCCTTTTCCACAAATGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGCTCCGGAGCTACGCTaGCTAGCGTGGCCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTAPELR*LAWPAP
Trigger: CGGCGCCGGCCACGCTAGCCAGCGTAGCTCCGGAGC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617334.1
CDS-3UTR TCA 90 bp TTGGGAGATTTAGGAGGTTGTGATAAGCTGAATTCTTCTTTCTGGATCTCAGGTTTGGTGGCTCCGCGGTaGGCCTCTTCTCGGGCATGC +
Preference number: 4 (lower is better)
Translates to: LGDLGGCDKLNSSFWISGLVAPR*ASSRAC
Trigger: GCATGCCCGAGAAGAGGCTCACCGCGGAGCCACCAA...ACCTGAGATCCAGAAAGAAGAATTCAGCTTATCACAACCTCCTAAATCTCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGCCTCTTCTCGGGCATaGCGTCCCCGCTGCCCGCGC +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKASSRA*RPRCPR
Trigger: GCGCGGGCAGCGGGGACGGCATGCCCGAGAAGAGGC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATTGGTGGCTCCGCGGTaGGCCTCTTCTCGGGCATGC +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLELVAPR*ASSRAC
Trigger: GCATGCCCGAGAAGAGGCTCACCGCGGAGCCACCAA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTACACCAGTCCGCCCTaGTCTCTGGTCCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSYTSPP*SLVQRS
Trigger: AGAGCGCTGGACCAGAGAGCAGGGCGGACTGGTGTA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CACAGAATCTTGGTGCCCTGTAATCCCAGTATTTTGGGAAGCCATGGTGGGAGGGTAATCCCAGTATTTTaGGAAGCCATGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HRILVPCNPSILGSHGGRVIPVF*EAMVGG
Trigger: TCCTCCCACCATGGCTTCCCAAAATACTGGGATTAC...CCTCCCACCATGGCTTCCCAAAATACTGGGATTACAGGGCACCAAGATTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTGGTGGCTCCGCGGTaGGCCTCTTCTCGGGCATGC +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLVAPR*ASSRAC
Trigger: GCATGCCCGAGAAGAGGCTCACCGCGGAGCCACCAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATACACCAGTCCGCCCTaGTCTCTGGTCCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSYTSPP*SLVQRS
Trigger: AGAGCGCTGGACCAGAGAGCAGGGCGGACTGGTGTA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CACAGAATCTTGGTGCCCTGTAATCCCAGTATTTTGGGAAGCCATGGTGGGAGGGTCAATATCCTTCCTTaGTTTTGCTTGACGGAGGTG +
Preference number: 4 (lower is better)
Translates to: HRILVPCNPSILGSHGGRVNILP*FCLTEV
Trigger: CACCTCCGTCAAGCAAAACCAAGGAAGGATATTGAC...CCTCCCACCATGGCTTCCCAAAATACTGGGATTACAGGGCACCAAGATTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATTGGTGGCTCCGCGGTaGGCCTCTTCTCGGGCATGC +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKLVAPR*ASSRAC
Trigger: GCATGCCCGAGAAGAGGCTCACCGCGGAGCCACCAA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CACAGAATCTTGGTGCCCTGTAATCCCAGTATTTTGGGAAGCCATGGTGGGAGGAATTCATGCCGGACTTaGTCCATCTTACTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: HRILVPCNPSILGSHGGRNSCRT*SILLVR
Trigger: TCTCACAAGTAAGATGGAGCAAGTCCGGCATGAATT...CCTCCCACCATGGCTTCCCAAAATACTGGGATTACAGGGCACCAAGATTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp AAGAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCATTCTGTAATAGTTGGTaGCTCCGCGGTGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KSGRRSNVCGKKILRLLAFCNSW*LRGEPL
Trigger: AAGAGGCTCACCGCGGAGCCACCAACTATTACAGAA...TGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp CACAGAATCTTGGTGCCCTGTAATCCCAGTATTTTGGGAAGCCATGGTGGGAGGGATCTCAGGTATCTGTaGAATGCAAGATTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: HRILVPCNPSILGSHGGRDLRYL*NARFGS
Trigger: AGACCCAAATCTTGCATTCCACAGATACCTGAGATC...CCTCCCACCATGGCTTCCCAAAATACTGGGATTACAGGGCACCAAGATTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCGCCGGGGTTGCTATaGAGCTTAGACAATACGGCC +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSAPGLL*SLDNTA
Trigger: GGCCGTATTGTCTAAGCTCCATAGCAACCCCGGCGC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617334.1
CDS-3UTR TCA 90 bp TCTCAGGTATCTGTGGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCATATCCAGCTGGGGCTTaGGACATTCAGAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: SQVSVECKIWVLMARGLPYPAGA*DIQKCQ
Trigger: CTGACATTTCTGAATGTCTCAAGCCCCAGCTGGATA...TGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGCATCAAGCTGCTCATaGAGAATCTTCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSASSCS*RIFPQP
Trigger: TGGCTGGGGGAAGATTCTTCATGAGCAGCTTGATGC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCATTTGTGGAAAAGGGATCCTTCCTTGGTTTTaGTTGACGGAGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GMQDLGLNGKRVAICGKGILPWF*LTEVPE
Trigger: TTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGAT...CCCTTTTCCACAAATGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp ATCATCCTTAGAAGAACCTGGATACAAAAGCTCCCGCTTCCAAGGCTTTTGAGTTTCTTCTGTAATAGTTaGTGGCTCCGCGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: IILRRTWIQKLPLPRLLSFFCNS*WLRGEP
Trigger: AGGCTCACCGCGGAGCCACCAACTATTACAGAAGAA...ACTCAAAAGCCTTGGAAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp CCTAGGTTCTTCTGTATAAGCGTATCTTCTATCCAGCTGGGGCTTGAGACATTCGATTATCTTCTTCAGTaGCAGGAGGTGGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: PRFFCISVSSIQLGLETFDYLLQ*QEVVDW
Trigger: CCAGTCTACCACCTCCTGCCACTGAAGAAGATAATC...GAATGTCTCAAGCCCCAGCTGGATAGAAGATACGCTTATACAGAAGAACCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp TCTCAGGTATCTGTGGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCAACTCTCAGAAGAGCTTaGGAAGGAGTGTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SQVSVECKIWVLMARGLPTLRRA*EGVSCR
Trigger: TCTACAAGACACTCCTTCTCAAGCTCTTCTGAGAGT...TGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp GGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCATTTGTGGAAAAGGGCCACAACTTGTTCCCTaGATGCTCGCAGAATTTAGT +
Preference number: 4 (lower is better)
Translates to: GMQDLGLNGKRVAICGKGPQLVP*MLAEFS
Trigger: ACTAAATTCTGCGAGCATTCAGGGAACAAGTTGTGG...CCCTTTTCCACAAATGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCATCAAGCTGCTCATaGAGAATCTTCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSASSCS*RIFPQP
Trigger: TGGCTGGGGGAAGATTCTTCATGAGCAGCTTGATGC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATACACCAGTCCGCCCTaGTCTCTGGTCCAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKYTSPP*SLVQRS
Trigger: AGAGCGCTGGACCAGAGAGCAGGGCGGACTGGTGTA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGCTGTCACTTCTGGCTaGTGTGGGCAGACATATTCT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSAVTSG*CGQTYS
Trigger: AGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTTCTGTAATAGTTGGTaGCTCCGCGGTGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSFCNSW*LRGEPL
Trigger: AAGAGGCTCACCGCGGAGCCACCAACTATTACAGAA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GTCAAGAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGTGGAATGCAAGATTTaGGTCTTAATGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VKSGRRSNVCGKKILRLLVECKI*VLMARG
Trigger: CCCTCTTGCCATTAAGACCCAAATCTTGCATTCCAC...AAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTCTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR CAA 72 bp TTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTGCTaGACGGAGGTGCCAGAATTTCAGTTCAGCACTAGC +
Preference number: 4 (lower is better)
Translates to: LWKRVNILPWFC*TEVPEFQFSTS
Trigger: GCTAGTGCTGAACTGAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR CAA 72 bp CCATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTaGCTTGACGGAGGTGCCAGAATTTCAGTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PFVEKGQYPSLV*LDGGARISVQH
Trigger: GTGCTGAACTGAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
3UTR CAA 72 bp GGGTTGCCATTTGTGGAAAAGGGTCAATATCCTTCCTaGGTTTTGCTTGACGGAGGTGCCAGAATTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GLPFVEKGQYPS*VLLDGGARISV
Trigger: AACTGAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTTCCTTGGTTTTGCTTaGCGGAGGTGCCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSFLGFA*RRCQNF
Trigger: GAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCTGAAGTGTTTCTTGGTAGAAAAGCTGATGATAAGCCTGCAGGTCAAACCAAATTCCTTGGTTTTGCTTaGCGGAGGTGCCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: AEVFLGRKADDKPAGQTKFLGFA*RRCQNF
Trigger: GAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAA...TTTGGTTTGACCTGCAGGCTTATCATCAGCTTTTCTACCAAGAAACACTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACAAGGCACCAACATCTaGCACGGTTTTAACCCTAGG +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSQGTNI*HGFNPR
Trigger: CCTAGGGTTAAAACCGTGTCAGATGTTGGTGCCTTG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCATTACCTGGTTCTGCTaGTACAGAGAAGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSITWFC*YREAGL
Trigger: CAGTCCAGCTTCTCTGTATCAGCAGAACCAGGTAAT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAGCATCAAGCTGCTCATaGAGAATCTTCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEASSCS*RIFPQP
Trigger: TGGCTGGGGGAAGATTCTTCATGAGCAGCTTGATGC...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGGCTTCTATATACTTTaGGTAGCACCAGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSGFYIL*VAPGWL
Trigger: CAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCATCCTTCCTTGGTTTTaGTTGACGGAGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSILPWF*LTEVPE
Trigger: TTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGAT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATTCTTCTGTAATAGTTaGTGGCTCCGCGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSFFCNS*WLRGEP
Trigger: AGGCTCACCGCGGAGCCACCAACTATTACAGAAGAA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGATTATCTTCTTCAGTaGCAGGAGGTGGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSDYLLQ*QEVVDW
Trigger: CCAGTCTACCACCTCCTGCCACTGAAGAAGATAATC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GTCAAGAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGAGGGTTGCCATTTGTaGAAAAGGGTCAATATCCTT +
Preference number: 4 (lower is better)
Translates to: VKSGRRSNVCGKKILRLLEGCHL*KRVNIL
Trigger: AAGGATATTGACCCTTTTCCACAAATGGCAACCCTC...AAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTCTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp CTCAATCACATCATCCTTAGAAGAACCTGGATACAAAAGCTCCCGCTTCCAAGGATCCTTAGAAGAACCTaGATACAAAAGCTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: LNHIILRRTWIQKLPLPRILRRT*IQKLPL
Trigger: AAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGAT...CCTTGGAAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGATGTGATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATGTCGGCCATATGGTTaGAGGCCTAGGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSCRPYG*RPRKES
Trigger: TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGAATGCTGTCACTTCTaGCTGCTGTGGGCAGACATA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSECCHF*LLWADI
Trigger: TATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
3UTR CAA 72 bp GTGGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTaGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VECKIWVLMARG*PFVEKGQYPSL
Trigger: CAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCACTCTCAGAAGAGCTTaGGAAGGAGTGTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSTLRRA*EGVSCR
Trigger: TCTACAAGACACTCCTTCTCAAGCTCTTCTGAGAGT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp TCTCAGGTATCTGTGGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCATTTGTTGAGGCTGAATaGGTAACACAGAATCTTGGT +
Preference number: 4 (lower is better)
Translates to: SQVSVECKIWVLMARGLPFVEAE*VTQNLG
Trigger: ACCAAGATTCTGTGTTACTCATTCAGCCTCAACAAA...TGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATATCCAGCTGGGGCTTaGGACATTCAGAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSYPAGA*DIQKCQ
Trigger: CTGACATTTCTGAATGTCTCAAGCCCCAGCTGGATA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCCACAACTTGTTCCCTaGATGCTCGCAGAATTTAGT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSPQLVP*MLAEFS
Trigger: ACTAAATTCTGCGAGCATTCAGGGAACAAGTTGTGG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAATTACCTGGTTCTGCTaGTACAGAGAAGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSITWFC*YREAGL
Trigger: CAGTCCAGCTTCTCTGTATCAGCAGAACCAGGTAAT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGGCTTCTATATACTTTaGGTAGCACCAGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSGFYIL*VAPGWL
Trigger: CAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGTTATTCTCCGGAACTaGTCAATGTCTGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSVILRN*SMSVQH
Trigger: GTGCTGGACAGACATTGAGCAGTTCCGGAGAATAAC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
CDS-3UTR CCA 90 bp GGGTTGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTGCTTGACGGAGAAGTTTATATAGTCTaGGGTTTCTCCAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: GLPFVEKGQYPSLVLLDGEVYIV*GFSNWL
Trigger: AAGCCAGTTGGAGAAACCCCAGACTATATAAACTTC...TCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp TCTCAGGTATCTGTGGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCACTGAATTCTTCTTTCTaGATCTCAGGTATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SQVSVECKIWVLMARGLPLNSSF*ISGICG
Trigger: TCCACAGATACCTGAGATCCAGAAAGAAGAATTCAG...TGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp TTGGGAGATTTAGGAGGTTGTGATAAGCTGAATTCTTCTTTCTGGATCTCAGGTGTCCAATGTCAAGAGTaGCAGAAGGAGCAACGTATG +
Preference number: 4 (lower is better)
Translates to: LGDLGGCDKLNSSFWISGVQCQE*QKEQRM
Trigger: CATACGTTGCTCCTTCTGCCACTCTTGACATTGGAC...ACCTGAGATCCAGAAAGAAGAATTCAGCTTATCACAACCTCCTAAATCTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTACCATCTTTGTCCATaGCTCAAGAAGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSYHLCP*LKKEEK
Trigger: CTTCTCCTCCTTCTTGAGCCATGGACAAAGATGGTA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATGTCGGCCATATGGTTaGAGGCCTAGGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLECRPYG*RPRKES
Trigger: TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAGAATGCTGTCACTTCTaGCTGCTGTGGGCAGACATA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEECCHF*LLWADI
Trigger: TATGTCTGCCCACAGCAGCCAGAAGTGACAGCATTC...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCAAGAGGGTTGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTGCTTAGTAACACAGAATCTTaGTGCCCTGTAATCCCAGTA +
Preference number: 4 (lower is better)
Translates to: ARGLPFVEKGQYPSLVLLSNTES*CPVIPV
Trigger: TACTGGGATTACAGGGCACCAAGATTCTGTGTTACT...AAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCCTCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAATTCAAGGTGGAAGTaGGAAGGAAAGGCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSNSRWK*EGKASG
Trigger: TCCAGAGGCCTTTCCTTCCCACTTCCACCTTGAATT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAGGGAGCAGGAGCTTTaGTGTGTCAATCTAATTTCC +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSREQEL*CVNLIS
Trigger: GGAAATTAGATTGACACACCAAAGCTCCTGCTCCCT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR TCA 90 bp GTCAAGAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGTTGATACTGTTTGCTaGCTTTGTTTTGCTAATGCA +
Preference number: 4 (lower is better)
Translates to: VKSGRRSNVCGKKILRLLVDTVC*LCFANA
Trigger: TGCATTAGCAAAACAAAGTCAGCAAACAGTATCAAC...AAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTCTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAACTCTCAGAAGAGCTTaGGAAGGAGTGTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSTLRRA*EGVSCR
Trigger: TCTACAAGACACTCCTTCTCAAGCTCTTCTGAGAGT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATATCCAGCTGGGGCTTaGGACATTCAGAAATGTCAG +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEYPAGA*DIQKCQ
Trigger: CTGACATTTCTGAATGTCTCAAGCCCCAGCTGGATA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCCAAGGCACCAACATCTaGCACGGTTTTAACCCTAGG +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTQGTNI*HGFNPR
Trigger: CCTAGGGTTAAAACCGTGTCAGATGTTGGTGCCTTG...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAAGCCTGTAGCTTTCTaGAGTATGTGGAGTCTAACT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSKPVAF*SMWSLT
Trigger: AGTTAGACTCCACATACTTCAGAAAGCTACAGGCTT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCACAGACTCATCACAATaGGAATGGCACAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSTDSSQ*EWHKSL
Trigger: TAAGGACTTGTGCCATTCTCATTGTGATGAGTCTGT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAATCCTTCCTTGGTTTTaGTTGACGGAGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEILPWF*LTEVPE
Trigger: TTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGAT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGCTGTCACTTCTGGCTaGTGTGGGCAGACATATTCT +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTAVTSG*CGQTYS
Trigger: AGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAAACATTCACAAGAATaGTGTCACTTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSKHSQE*CHFWLL
Trigger: CAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCTGTAATAGTTGGTaGCTCCGCGGTGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTFCNSW*LRGEPL
Trigger: AAGAGGCTCACCGCGGAGCCACCAACTATTACAGAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGGTTGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTGCTTGACGGATTACAACATCATAAATaGGATTTCGAGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLPFVEKGQYPSLVLLDGLQHHK*DFEVAG
Trigger: ACCAGCAACCTCGAAATCCCATTTATGATGTTGTAA...TCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp GGGTTGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTGCTTGACGGACTTGTGAGACCAATTTaGCTAACCTGTATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GLPFVEKGQYPSLVLLDGLVRPI*LTCIQS
Trigger: ACTTTGAATACAGGTTAGCCAAATTGGTCTCACAAG...TCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGTCAATATCCTTCCTTaGTTTTGCTTGACGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSVNILP*FCLTEV
Trigger: CACCTCCGTCAAGCAAAACCAAGGAAGGATATTGAC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGAGGGTTGCCATTTGTaGAAAAGGGTCAATATCCTT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSEGCHL*KRVNIL
Trigger: AAGGATATTGACCCTTTTCCACAAATGGCAACCCTC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGTGGAATGCAAGATTTaGGTCTTAATGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSVECKI*VLMARG
Trigger: CCCTCTTGCCATTAAGACCCAAATCTTGCATTCCAC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGATCTCAGGTATCTGTaGAATGCAAGATTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSDLRYL*NARFGS
Trigger: AGACCCAAATCTTGCATTCCACAGATACCTGAGATC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCATCCTTAGAAGAACCTaGATACAAAAGCTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSILRRT*IQKLPL
Trigger: AAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGAT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAGTCCAATGTCAAGAGTaGCAGAAGGAGCAACGTATG +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEVQCQE*QKEQRM
Trigger: CATACGTTGCTCCTTCTGCCACTCTTGACATTGGAC...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATACCATCTTTGTCCATaGCTCAAGAAGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSYHLCP*LKKEEK
Trigger: CTTCTCCTCCTTCTTGAGCCATGGACAAAGATGGTA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTTCCAATTTCACAAGTaGTGTCCTCAGCTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSFQFHK*CPQLSW
Trigger: CCAAGAAAGCTGAGGACACCACTTGTGAAATTGGAA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACTGATACAGAGAAGCTaGACTGTTGGGTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSLIQRS*TVGSKE
Trigger: TTCTTTGGACCCAACAGTCCAGCTTCTCTGTATCAG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTGTCGGCCATATGGTTaGAGGCCTAGGAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTCRPYG*RPRKES
Trigger: TGATTCCTTCCTAGGCCTCCAACCATATGGCCGACA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517843.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGGAAGGAAAGGCCTCTaGAATCCTGCCTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKGRKGL*NPAWSL
Trigger: TAGTGACCAGGCAGGATTCCAGAGGCCTTTCCTTCC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR TCA 90 bp CTTTCTGGATCTCAGGTATCTGTGGAATGCAAGATTTGGGTCTTAATGGCAAGAGGAAGCCTCACCAAGTaGTACATAGAACTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LSGSQVSVECKIWVLMARGSLTK*YIELFH
Trigger: ATGAAAAAGTTCTATGTATCACTTGGTGAGGCTTCC...TCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTGAGATCCAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp GCTGAAGTGTTTCTTGGTAGAAAAGCTGATGATAAGCCTGCAGGTCAAACCAAATTGTTCTATCTCTTCTaGCCTCTCCTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: AEVFLGRKADDKPAGQTKLFYLF*PLLCSL
Trigger: CAAACTACAAAGGAGAGGTCAGAAGAGATAGAACAA...TTTGGTTTGACCTGCAGGCTTATCATCAGCTTTTCTACCAAGAAACACTTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTTGTTCTATCTCTTCTaGCCTCTCCTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSLFYLF*PLLCSL
Trigger: CAAACTACAAAGGAGAGGTCAGAAGAGATAGAACAA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTTCTCAAGATGTCTTTaGTGTCTTCCAGGATCCTTA +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSFSRCL*CLPGSL
Trigger: TAAGGATCCTGGAAGACATCAAAGACATCTTGAGAA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTTTGTTGAGGCTGAATaGGTAACACAGAATCTTGGT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSFVEAE*VTQNLG
Trigger: ACCAAGATTCTGTGTTACTCATTCAGCCTCAACAAA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAACAAGGCACCAACATCTaGCACGGTTTTAACCCTAGG +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKQGTNI*HGFNPR
Trigger: CCTAGGGTTAAAACCGTGTCAGATGTTGGTGCCTTG...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCACAACTTGTTCCCTaGATGCTCGCAGAATTTAGT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEPQLVP*MLAEFS
Trigger: ACTAAATTCTGCGAGCATTCAGGGAACAAGTTGTGG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAAGCCTGTAGCTTTCTaGAGTATGTGGAGTCTAACT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSKPVAF*SMWSLT
Trigger: AGTTAGACTCCACATACTTCAGAAAGCTACAGGCTT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATGTACCTTTATCTTCTaGCGTGCTGCAAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSCTFIF*RAANCS
Trigger: TGAACAGTTTGCAGCACGTCAGAAGATAAAGGTACA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAACAGACTCATCACAATaGGAATGGCACAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSTDSSQ*EWHKSL
Trigger: TAAGGACTTGTGCCATTCTCATTGTGATGAGTCTGT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGGCTTCTATATACTTTaGGTAGCACCAGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTGFYIL*VAPGWL
Trigger: CAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517843.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCATAGGTAGTAATCTCCATTaGTCACTAGATAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: EWQKEQRMWQKDIALACIGSNLH*SLDSIF
Trigger: AAAAATGCTATCTAGTGAGCAATGGAGATTACTACC...TATGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCATCCTTCCTTGGTTTTaGTTGACGGAGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTILPWF*LTEVPE
Trigger: TTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGAT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGTAGAAAAGCTGATGATAAGCCTGCAGGTCAAACCAAAAGTACACACTGTTCTCAGGTATCTGTGGAATaGAAGATTTGGGTCTTAATG +
Preference number: 4 (lower is better)
Translates to: GRKADDKPAGQTKSTHCSQVSVE*KIWVLM
Trigger: CATTAAGACCCAAATCTTGCATTCCACAGATACCTG...AGAACAGTGTGTACTTTTGGTTTGACCTGCAGGCTTATCATCAGCTTTTCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR GCA 90 bp GGGTTGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTGCTTGACGGAAAAAGATATTGCGCTTaGTTGCATACTTTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: GLPFVEKGQYPSLVLLDGKRYCA*LHTLKG
Trigger: GCCTTTTAAAGTATGCAAGCAAGCGCAATATCTTTT...TCCGTCAAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGTTATTCTCCGGAACTaGTCAATGTCTGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTVILRN*SMSVQH
Trigger: GTGCTGGACAGACATTGAGCAGTTCCGGAGAATAAC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGCTGTCACTTCTGGCTaGTGTGGGCAGACATATTCT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKAVTSG*CGQTYS
Trigger: AGAATATGTCTGCCCACAGCAGCCAGAAGTGACAGC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCAAGTTTCTCCGGAACTaGTCAATGTCTGTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTKFLRN*SMSVQH
Trigger: GTGCTGGACAGACATTGAGCAGTTCCGGAGAAACTT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGATTATCTTCTTCAGTaGCAGGAGGTGGTAGACTGG +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTDYLLQ*QEVVDW
Trigger: CCAGTCTACCACCTCCTGCCACTGAAGAAGATAATC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGAAGTTTATATAGTCTaGGGTTTCTCCAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSEVYIV*GFSNWL
Trigger: AAGCCAGTTGGAGAAACCCCAGACTATATAAACTTC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAGTCAATATCCTTCCTTaGTTTTGCTTGACGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEVNILP*FCLTEV
Trigger: CACCTCCGTCAAGCAAAACCAAGGAAGGATATTGAC...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGAGGGTTGCCATTTGTaGAAAAGGGTCAATATCCTT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSEGCHL*KRVNIL
Trigger: AAGGATATTGACCCTTTTCCACAAATGGCAACCCTC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAGTGGAATGCAAGATTTaGGTCTTAATGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEVECKI*VLMARG
Trigger: CCCTCTTGCCATTAAGACCCAAATCTTGCATTCCAC...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCTGAATTCTTCTTTCTaGATCTCAGGTATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSLNSSF*ISGICG
Trigger: TCCACAGATACCTGAGATCCAGAAAGAAGAATTCAG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TTGGGAGATTTAGGAGGTTGTGATAAGCTGAATTCTTCTTTCTGGATCTCAGGTTATCTTCTATCCAGCTaGGGCTTGAGACATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LGDLGGCDKLNSSFWISGYLLSS*GLRHSE
Trigger: TTCTGAATGTCTCAAGCCCCAGCTGGATAGAAGATA...ACCTGAGATCCAGAAAGAAGAATTCAGCTTATCACAACCTCCTAAATCTCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATATCTTCTATCCAGCTaGGGCTTGAGACATTCAGAA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSYLLSS*GLRHSE
Trigger: TTCTGAATGTCTCAAGCCCCAGCTGGATAGAAGATA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGTAGAAAAGCTGATGATAAGCCTGCAGGTCAAACCAAAAGTACACACTGTTCTAAGGAGCAACGTATGTaGCAAAAAGATATTGCGCTT +
Preference number: 4 (lower is better)
Translates to: GRKADDKPAGQTKSTHCSKEQRM*QKDIAL
Trigger: AAGCGCAATATCTTTTTGCCACATACGTTGCTCCTT...AGAACAGTGTGTACTTTTGGTTTGACCTGCAGGCTTATCATCAGCTTTTCTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGTCCAATGTCAAGAGTaGCAGAAGGAGCAACGTATG +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTVQCQE*QKEQRM
Trigger: CATACGTTGCTCCTTCTGCCACTCTTGACATTGGAC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAATTTGATCCTACTGTaGAATTCATGCCGGACTTGC +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLENLILL*NSCRTC
Trigger: GCAAGTCCGGCATGAATTTCACAGTAGGATCAAATT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCCAGGGAGAAAAATTTaGTCCTACTGTGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSPGRKI*SYCEIH
Trigger: ATGAATTTCACAGTAGGATCAAATTTTTCTCCCTGG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCATACTTTACCAGGGAGAAAAATTTaGTCCTACTGTGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: AEGATYVAKRYCACLHTLPGRKI*SYCEIH
Trigger: ATGAATTTCACAGTAGGATCAAATTTTTCTCCCTGG...TAAAGTATGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGGAAGCCTCACCAAGTaGTACATAGAACTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSGSLTK*YIELFH
Trigger: ATGAAAAAGTTCTATGTATCACTTGGTGAGGCTTCC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360863.11
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCACTCTCAGAAGAGCTTaGGAAGGAGTGTCTTGTAGA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTTLRRA*EGVSCR
Trigger: TCTACAAGACACTCCTTCTCAAGCTCTTCTGAGAGT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATTCCTTGGTTTTGCTTaGCGGAGGTGCCAGAATTTC +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKFLGFA*RRCQNF
Trigger: GAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCCCACAACTTGTTCCCTaGATGCTCGCAGAATTTAGT +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTPQLVP*MLAEFS
Trigger: ACTAAATTCTGCGAGCATTCAGGGAACAAGTTGTGG...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAAGCCTGTAGCTTTCTaGAGTATGTGGAGTCTAACT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEKPVAF*SMWSLT
Trigger: AGTTAGACTCCACATACTTCAGAAAGCTACAGGCTT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCATAAGATCCATGCTTaGAGAATGAGTCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSHKIHA*RMSLKK
Trigger: TTTCTTGAGACTCATTCTTCAAGCATGGATCTTATG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAATTACCTGGTTCTGCTaGTACAGAGAAGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKITWFC*YREAGL
Trigger: CAGTCCAGCTTCTCTGTATCAGCAGAACCAGGTAAT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATGTACCTTTATCTTCTaGCGTGCTGCAAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLECTFIF*RAANCS
Trigger: TGAACAGTTTGCAGCACGTCAGAAGATAAAGGTACA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAACAGACTCATCACAATaGGAATGGCACAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLETDSSQ*EWHKSL
Trigger: TAAGGACTTGTGCCATTCTCATTGTGATGAGTCTGT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACTAAACTCACAGAACTaGGGCCAGAATTTAAACAGA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSLNSQN*GQNLNR
Trigger: TCTGTTTAAATTCTGGCCTCAGTTCTGTGAGTTTAG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGGCTTCTATATACTTTaGGTAGCACCAGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKGFYIL*VAPGWL
Trigger: CAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517843.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACAAACAAGAACTCCTTaGATATCCTGTGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEQTRTP*ISCGVA
Trigger: AGCAACACCACAGGATATTCAAGGAGTTCTTGTTTG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR GCA 90 bp CCCTTTCTCAATCACATCATCCTTAGAAGAACCTGGATACAAAAGCTCCCGCTTCAAACTCCTTTCTATTaGCAATGTCATAAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: PFLNHIILRRTWIQKLPLQTPFY*QCHKSY
Trigger: ATAGGACTTATGACATTGGCAATAGAAAGGAGTTTG...AAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGATGTGATTGAGAAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAATCCTTCCTTGGTTTTaGTTGACGGAGGTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKILPWF*LTEVPE
Trigger: TTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGAT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACAGGTATCTGTGGAATaGAAGATTTGGGTCTTAATG +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSQVSVE*KIWVLM
Trigger: CATTAAGACCCAAATCTTGCATTCCACAGATACCTG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAACTTGTTCCCTGAATaGTCGCAGAATTTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSNLFPE*SQNLVK
Trigger: CTTTACTAAATTCTGCGAGCATTCAGGGAACAAGTT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAAACATTCACAAGAATaGTGTCACTTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEKHSQE*CHFWLL
Trigger: CAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAATATCCTGTGGTGTTaGTCAGGCTTGTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLENILWC*SGLFLE
Trigger: TTCCAAGAACAAGCCTGAGCAACACCACAGGATATT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCTTGTGAGACCAATTTaGCTAACCTGTATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSLVRPI*LTCIQS
Trigger: ACTTTGAATACAGGTTAGCCAAATTGGTCTCACAAG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGTCAATATCCTTCCTTaGTTTTGCTTGACGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTVNILP*FCLTEV
Trigger: CACCTCCGTCAAGCAAAACCAAGGAAGGATATTGAC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAGAGGGTTGCCATTTGTaGAAAAGGGTCAATATCCTT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEEGCHL*KRVNIL
Trigger: AAGGATATTGACCCTTTTCCACAAATGGCAACCCTC...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAGATCTCAGGTATCTGTaGAATGCAAGATTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEDLRYL*NARFGS
Trigger: AGACCCAAATCTTGCATTCCACAGATACCTGAGATC...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACTGAATTCTTCTTTCTaGATCTCAGGTATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSLNSSF*ISGICG
Trigger: TCCACAGATACCTGAGATCCAGAAAGAAGAATTCAG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAATCCTTAGAAGAACCTaGATACAAAAGCTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEILRRT*IQKLPL
Trigger: AAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGAT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAAGGAGCAACGTATGTaGCAAAAAGATATTGCGCTT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSKEQRM*QKDIAL
Trigger: AAGCGCAATATCTTTTTGCCACATACGTTGCTCCTT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGAGAAGCTGGACTGTTaGGTCCAAAGAAATATTTTT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSEKLDC*VQRNIF
Trigger: AAAAATATTTCTTTGGACCCAACAGTCCAGCTTCTC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCCTGATACAGAGAAGCTaGACTGTTGGGTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLIQRS*TVGSKE
Trigger: TTCTTTGGACCCAACAGTCCAGCTTCTCTGTATCAG...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCAACGTAGCACATTTCTaGCCCTCTGTTCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTNVAHF*PSVHSL
Trigger: CAGAGAATGAACAGAGGGCCAGAAATGTGCTACGTT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACCAGGGAGAAAAATTTaGTCCTACTGTGAAATTCAT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSPGRKI*SYCEIH
Trigger: ATGAATTTCACAGTAGGATCAAATTTTTCTCCCTGG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGTTGATACTGTTTGCTaGCTTTGTTTTGCTAATGCA +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSVDTVC*LCFANA
Trigger: TGCATTAGCAAAACAAAGTCAGCAAACAGTATCAAC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATTGTTCTATCTCTTCTaGCCTCTCCTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLELFYLF*PLLCSL
Trigger: CAAACTACAAAGGAGAGGTCAGAAGAGATAGAACAA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATTTGTTGAGGCTGAATaGGTAACACAGAATCTTGGT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEFVEAE*VTQNLG
Trigger: ACCAAGATTCTGTGTTACTCATTCAGCCTCAACAAA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTGTACCTTTATCTTCTaGCGTGCTGCAAACTGTTCA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTCTFIF*RAANCS
Trigger: TGAACAGTTTGCAGCACGTCAGAAGATAAAGGTACA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAGAGCCACAAAACGTTaGAATTGTCTTGAAGTAACT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSRATKR*NCLEVT
Trigger: AGTTACTTCAAGACAATTTCAACGTTTTGTGGCTCT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACTAAACTCACAGAACTaGGGCCAGAATTTAAACAGA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLELNSQN*GQNLNR
Trigger: TCTGTTTAAATTCTGGCCTCAGTTCTGTGAGTTTAG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAAGGAAATCATCTGTTaGCAGAGAATCTTCAAATTC +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSKEIIC*QRIFKF
Trigger: GAATTTGAAGATTCTCTGGCAACAGATGATTTCCTT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCAATTCATGCCGGACTTaGTCCATCTTACTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTNSCRT*SILLVR
Trigger: TCTCACAAGTAAGATGGAGCAAGTCCGGCATGAATT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGGTAGTAATCTCCATTaGTCACTAGATAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSGSNLH*SLDSIF
Trigger: AAAAATGCTATCTAGTGAGCAATGGAGATTACTACC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAAAAGATATTGCGCTTaGTTGCATACTTTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSKRYCA*LHTLKG
Trigger: GCCTTTTAAAGTATGCAAGCAAGCGCAATATCTTTT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTTTTCTAGCCTATTTTaGACATGCTTCTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSFSSLF*TCFWIS
Trigger: TGAAATCCAGAAGCATGTGCAAAATAGGCTAGAAAA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAATAATCTTCTGGGCTTaGTCTACTGGAATGTCAATT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSIIFWA*STGMSI
Trigger: AATTGACATTCCAGTAGAGCAAGCCCAGAAGATTAT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAAATTTGTGAGAGGTTaGAAGCCTGCAAACAACTTT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSKFVRG*KPANNF
Trigger: AAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTTTTTCCAGAAATTGTaGAGCATCATTAGCTACTTC +
Preference number: 4 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSFFQKL*SIISYF
Trigger: GAAGTAGCTAATGATGCTCCACAATTTCTGGAAAAA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATTACAACATCATAAATaGGATTTCGAGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSLQHHK*DFEVAG
Trigger: ACCAGCAACCTCGAAATCCCATTTATGATGTTGTAA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAGAAGTTTATATAGTCTaGGGTTTCTCCAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEEVYIV*GFSNWL
Trigger: AAGCCAGTTGGAGAAACCCCAGACTATATAAACTTC...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGTGGAATGCAAGATTTaGGTCTTAATGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKVECKI*VLMARG
Trigger: CCCTCTTGCCATTAAGACCCAAATCTTGCATTCCAC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGATCTCAGGTATCTGTaGAATGCAAGATTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTDLRYL*NARFGS
Trigger: AGACCCAAATCTTGCATTCCACAGATACCTGAGATC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTATCTTCTATCCAGCTaGGGCTTGAGACATTCAGAA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTYLLSS*GLRHSE
Trigger: TTCTGAATGTCTCAAGCCCCAGCTGGATAGAAGATA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAAGGAGCAACGTATGTaGCAAAAAGATATTGCGCTT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEKEQRM*QKDIAL
Trigger: AAGCGCAATATCTTTTTGCCACATACGTTGCTCCTT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATACCATCTTTGTCCATaGCTCAAGAAGGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKYHLCP*LKKEEK
Trigger: CTTCTCCTCCTTCTTGAGCCATGGACAAAGATGGTA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCCAATTTCACAAGTaGTGTCCTCAGCTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTFQFHK*CPQLSW
Trigger: CCAAGAAAGCTGAGGACACCACTTGTGAAATTGGAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGAGAAGCTGGACTGTTaGGTCCAAAGAAATATTTTT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSEKLDC*VQRNIF
Trigger: AAAAATATTTCTTTGGACCCAACAGTCCAGCTTCTC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATGTTCAATAATCTTCTaGGCTTGCTCTACTGGAATG +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLECSIIF*ACSTGM
Trigger: CATTCCAGTAGAGCAAGCCCAGAAGATTATTGAACA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTGTTCTATCTCTTCTaGCCTCTCCTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLFYLF*PLLCSL
Trigger: CAAACTACAAAGGAGAGGTCAGAAGAGATAGAACAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCTCAAGATGTCTTTaGTGTCTTCCAGGATCCTTA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTFSRCL*CLPGSL
Trigger: TAAGGATCCTGGAAGACATCAAAGACATCTTGAGAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAAGCCTGTAGCTTTCTaGAGTATGTGGAGTCTAACT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKKPVAF*SMWSLT
Trigger: AGTTAGACTCCACATACTTCAGAAAGCTACAGGCTT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACATAAGATCCATGCTTaGAGAATGAGTCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEHKIHA*RMSLKK
Trigger: TTTCTTGAGACTCATTCTTCAAGCATGGATCTTATG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
CDS-3UTR TCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAGAGCCACAAAACGTTaGAATTGTCTTGAAGTAACT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLERATKR*NCLEVT
Trigger: AGTTACTTCAAGACAATTTCAACGTTTTGTGGCTCT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTTCCTTTGAGTAAATaGAATCATGGGAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTFPLSK*NHGRQH
Trigger: GTGCTGTCTCCCATGATTTCATTTACTCAAAGGAAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAATTCATGCCGGACTTaGTCCATCTTACTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKNSCRT*SILLVR
Trigger: TCTCACAAGTAAGATGGAGCAAGTCCGGCATGAATT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACAAACTCCTTTCTATTaGCAATGTCATAAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSQTPFY*QCHKSY
Trigger: ATAGGACTTATGACATTGGCAATAGAAAGGAGTTTG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGGTAGTAATCTCCATTaGTCACTAGATAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSGSNLH*SLDSIF
Trigger: AAAAATGCTATCTAGTGAGCAATGGAGATTACTACC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAAAAGATATTGCGCTTaGTTGCATACTTTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSKRYCA*LHTLKG
Trigger: GCCTTTTAAAGTATGCAAGCAAGCGCAATATCTTTT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAAGGATATATTCCTCTaGTGTGTCAAAAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEKDIFL*CVKKVF
Trigger: GAAGACCTTTTTGACACAGCAGAGGAATATATCCTT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAGCCTATTTTGCACATaGTTCTGGATTTCAACTAGA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLESLFCT*FWISTR
Trigger: TCTAGTTGAAATCCAGAAGCATGTGCAAAATAGGCT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAAACATTCACAAGAATaGTGTCACTTCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKKHSQE*CHFWLL
Trigger: CAGCAGCCAGAAGTGACAGCATTCTTGTGAATGTTT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATTTTTCCAGAAATTGTaGAGCATCATTAGCTACTTC +
Preference number: 4 (lower is better)
Translates to: LELLMSAESGLKNSLNLSFFQKL*SIISYF
Trigger: GAAGTAGCTAATGATGCTCCACAATTTCTGGAAAAA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACTTGTGAGACCAATTTaGCTAACCTGTATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLELVRPI*LTCIQS
Trigger: ACTTTGAATACAGGTTAGCCAAATTGGTCTCACAAG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGAGGGTTGCCATTTGTaGAAAAGGGTCAATATCCTT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKEGCHL*KRVNIL
Trigger: AAGGATATTGACCCTTTTCCACAAATGGCAACCCTC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGATCTCAGGTATCTGTaGAATGCAAGATTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKDLRYL*NARFGS
Trigger: AGACCCAAATCTTGCATTCCACAGATACCTGAGATC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAATCCTTAGAAGAACCTaGATACAAAAGCTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKILRRT*IQKLPL
Trigger: AAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGAT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATATCTTCTATCCAGCTaGGGCTTGAGACATTCAGAA +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKYLLSS*GLRHSE
Trigger: TTCTGAATGTCTCAAGCCCCAGCTGGATAGAAGATA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCAAGGAGCAACGTATGTaGCAAAAAGATATTGCGCTT +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTKEQRM*QKDIAL
Trigger: AAGCGCAATATCTTTTTGCCACATACGTTGCTCCTT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATGTCCTCAGCTTTCTTaGAAAATGTCTCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLECPQLS*KMSLYA
Trigger: TGCATAAAGAGACATTTTCCAAGAAAGCTGAGGACA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGTTGATACTGTTTGCTaGCTTTGTTTTGCTAATGCA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTVDTVC*LCFANA
Trigger: TGCATTAGCAAAACAAAGTCAGCAAACAGTATCAAC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATTGTTCTATCTCTTCTaGCCTCTCCTTTGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKLFYLF*PLLCSL
Trigger: CAAACTACAAAGGAGAGGTCAGAAGAGATAGAACAA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp TTTACTTCAGGTGATTTATTGGGAGATTTAGGAGGTTGTGATAAGCTGAATTCTTTCTCAAGATGTCTTTaGTGTCTTCCAGGATCCTTA +
Preference number: 4 (lower is better)
Translates to: FTSGDLLGDLGGCDKLNSFSRCL*CLPGSL
Trigger: TAAGGATCCTGGAAGACATCAAAGACATCTTGAGAA...AGAATTCAGCTTATCACAACCTCCTAAATCTCCCAATAAATCACCTGAAGTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATTCTCAAGATGTCTTTaGTGTCTTCCAGGATCCTTA +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKFSRCL*CLPGSL
Trigger: TAAGGATCCTGGAAGACATCAAAGACATCTTGAGAA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATTTGTTGAGGCTGAATaGGTAACACAGAATCTTGGT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKFVEAE*VTQNLG
Trigger: ACCAAGATTCTGTGTTACTCATTCAGCCTCAACAAA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCAGAGCCACAAAACGTTaGAATTGTCTTGAAGTAACT +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTRATKR*NCLEVT
Trigger: AGTTACTTCAAGACAATTTCAACGTTTTGTGGCTCT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAACTAAACTCACAGAACTaGGGCCAGAATTTAAACAGA +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKLNSQN*GQNLNR
Trigger: TCTGTTTAAATTCTGGCCTCAGTTCTGTGAGTTTAG...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACAAACTCCTTTCTATTaGCAATGTCATAAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEQTPFY*QCHKSY
Trigger: ATAGGACTTATGACATTGGCAATAGAAAGGAGTTTG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAGGTAGTAATCTCCATTaGTCACTAGATAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEGSNLH*SLDSIF
Trigger: AAAAATGCTATCTAGTGAGCAATGGAGATTACTACC...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAACAGGTATCTGTGGAATaGAAGATTTGGGTCTTAATG +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKQVSVE*KIWVLM
Trigger: CATTAAGACCCAAATCTTGCATTCCACAGATACCTG...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCAACTTGTTCCCTGAATaGTCGCAGAATTTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTNLFPE*SQNLVK
Trigger: CTTTACTAAATTCTGCGAGCATTCAGGGAACAAGTT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAAAAGATATTGCGCTTaGTTGCATACTTTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEKRYCA*LHTLKG
Trigger: GCCTTTTAAAGTATGCAAGCAAGCGCAATATCTTTT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCAAGGATATATTCCTCTaGTGTGTCAAAAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTKDIFL*CVKKVF
Trigger: GAAGACCTTTTTGACACAGCAGAGGAATATATCCTT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCAGCCTATTTTGCACATaGTTCTGGATTTCAACTAGA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTSLFCT*FWISTR
Trigger: TCTAGTTGAAATCCAGAAGCATGTGCAAAATAGGCT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATTTTCTAGCCTATTTTaGACATGCTTCTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: QITGASHVSRIWFKEFLEFSSLF*TCFWIS
Trigger: TGAAATCCAGAAGCATGTGCAAAATAGGCTAGAAAA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCATAATCTTCTGGGCTTaGTCTACTGGAATGTCAATT +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTIIFWA*STGMSI
Trigger: AATTGACATTCCAGTAGAGCAAGCCCAGAAGATTAT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTACAACATCATAAATaGGATTTCGAGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLQHHK*DFEVAG
Trigger: ACCAGCAACCTCGAAATCCCATTTATGATGTTGTAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGAAGTTTATATAGTCTaGGGTTTCTCCAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKEVYIV*GFSNWL
Trigger: AAGCCAGTTGGAGAAACCCCAGACTATATAAACTTC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTGTCCTCAGCTTTCTTaGAAAATGTCTCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTCPQLS*KMSLYA
Trigger: TGCATAAAGAGACATTTTCCAAGAAAGCTGAGGACA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATGTTCAATAATCTTCTaGGCTTGCTCTACTGGAATG +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKCSIIF*ACSTGM
Trigger: CATTCCAGTAGAGCAAGCCCAGAAGATTATTGAACA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR TCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGTTGATACTGTTTGCTaGCTTTGTTTTGCTAATGCA +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKVDTVC*LCFANA
Trigger: TGCATTAGCAAAACAAAGTCAGCAAACAGTATCAAC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCCAAACTCCTTTCTATTaGCAATGTCATAAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTQTPFY*QCHKSY
Trigger: ATAGGACTTATGACATTGGCAATAGAAAGGAGTTTG...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAACTTGTTCCCTGAATaGTCGCAGAATTTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKNLFPE*SQNLVK
Trigger: CTTTACTAAATTCTGCGAGCATTCAGGGAACAAGTT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAAGGATATATTCCTCTaGTGTGTCAAAAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKKDIFL*CVKKVF
Trigger: GAAGACCTTTTTGACACAGCAGAGGAATATATCCTT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAGCCTATTTTGCACATaGTTCTGGATTTCAACTAGA +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKSLFCT*FWISTR
Trigger: TCTAGTTGAAATCCAGAAGCATGTGCAAAATAGGCT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTTTCTAGCCTATTTTaGACATGCTTCTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTFSSLF*TCFWIS
Trigger: TGAAATCCAGAAGCATGTGCAAAATAGGCTAGAAAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAATAATCTTCTGGGCTTaGTCTACTGGAATGTCAATT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKIIFWA*STGMSI
Trigger: AATTGACATTCCAGTAGAGCAAGCCCAGAAGATTAT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAAATTTGTGAGAGGTTaGAAGCCTGCAAACAACTTT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKKFVRG*KPANNF
Trigger: AAAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTCTCTGTACATGGCTTaGATTTTAAGTTGGAATTCA +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTSLYMA*ILSWNS
Trigger: TGAATTCCAACTTAAAATGCAAGCCATGTACAGAGA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR CCA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTTTTCCAGAAATTGTaGAGCATCATTAGCTACTTC +
Preference number: 4 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTFFQKL*SIISYF
Trigger: GAAGTAGCTAATGATGCTCCACAATTTCTGGAAAAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATTACAACATCATAAATaGGATTTCGAGGTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKLQHHK*DFEVAG
Trigger: ACCAGCAACCTCGAAATCCCATTTATGATGTTGTAA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAACTTGTGAGACCAATTTaGCTAACCTGTATTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKLVRPI*LTCIQS
Trigger: ACTTTGAATACAGGTTAGCCAAATTGGTCTCACAAG...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATGTCCTCAGCTTTCTTaGAAAATGTCTCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKCPQLS*KMSLYA
Trigger: TGCATAAAGAGACATTTTCCAAGAAAGCTGAGGACA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGAGAAGCTGGACTGTTaGGTCCAAAGAAATATTTTT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKEKLDC*VQRNIF
Trigger: AAAAATATTTCTTTGGACCCAACAGTCCAGCTTCTC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAACAAACTCCTTTCTATTaGCAATGTCATAAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKQTPFY*QCHKSY
Trigger: ATAGGACTTATGACATTGGCAATAGAAAGGAGTTTG...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGGTAGTAATCTCCATTaGTCACTAGATAGCATTTTT +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKGSNLH*SLDSIF
Trigger: AAAAATGCTATCTAGTGAGCAATGGAGATTACTACC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR GCA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAAAAGATATTGCGCTTaGTTGCATACTTTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKKRYCA*LHTLKG
Trigger: GCCTTTTAAAGTATGCAAGCAAGCGCAATATCTTTT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
34% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CCA 90 bp TTTACTTCAGGTGATTTATTGGGAGATTTAGGAGGTTGTGATAAGCTGAATTCTTTTTTCCAGAAATTGTaGAGCATCATTAGCTACTTC +
Preference number: 4 (lower is better)
Translates to: FTSGDLLGDLGGCDKLNSFFQKL*SIISYF
Trigger: GAAGTAGCTAATGATGCTCCACAATTTCTGGAAAAA...AGAATTCAGCTTATCACAACCTCCTAAATCTCCCAATAAATCACCTGAAGTAAA
34% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS CCA 90 bp CCAGAGAATCTTCAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGTGGGAGGCAAAAGGTACTTCTTACATGGTGGTGGAGAGAAAA +
Preference number: 5 (lower is better)
Translates to: PENLQFHMAGEASES*WEAKGTSYMVVERK
Trigger: TTTTCTCTCCACCACCATGTAAGAAGTACCTTTTGCCTCCCACCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGAAGATTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520117.5
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGGCGCCGCGCCGGGGTaGCTATGGAGCTTAGACAAT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSGAAPG*LWSLDN
Trigger: ATTGTCTAAGCTCCATAGCAACCCCGGCGCGGCGCC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617334.1
CDS GCA 90 bp ACCATCCTTTGCACAAACAAGAACTCCTTGAATATCCTGTGGTGTTaGTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCTTTGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: TILCTNKNSLNILWC*SGLFLEREQELWCV
Trigger: GACACACCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGTGCAAAGGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523600.1
CDS GCA 90 bp CCTCTGAAAAGGTCAAACAAGAACTCCTTGAATATCCTGTGGTGTTaGTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCTTTGGTGTGTC +
Preference number: 5 (lower is better)
Translates to: PLKRSNKNSLNILWC*SGLFLEREQELWCV
Trigger: GACACACCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGACCTTTTCAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS CCA 90 bp ACAAGGAAATCATCTGTTGCCAGAGAATCTTCAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGTGGGAGGCAAAAGGTACTTCTTA +
Preference number: 5 (lower is better)
Translates to: TRKSSVARESSVPHG*GGLRIMVGGKRYFL
Trigger: TAAGAAGTACCTTTTGCCTCCCACCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGAAGATTCTCTGGCAACAGATGATTTCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520117.5
CDS-3UTR CAA 90 bp CACAGAATCTTGGTGCCCTGTAATCCCAGTATTTTGGGAAGCCATGGTGGGAGGATCGGGGGCATTCATTaGAACAGGTTTAACCTCATT +
Preference number: 5 (lower is better)
Translates to: HRILVPCNPSILGSHGGRIGGIH*NRFNLI
Trigger: AATGAGGTTAAACCTGTTCAAATGAATGCCCCCGAT...CCTCCCACCATGGCTTCCCAAAATACTGGGATTACAGGGCACCAAGATTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS CCA 90 bp CAGCACCTAGCCCTACGTTATACACAGGCAAACGTAGCACATTTCTaGCCCTCTGTTCATTCTCTGTACATGGCTTGCATTTTAAGTTGG +
Preference number: 5 (lower is better)
Translates to: QHLALRYTQANVAHF*PSVHSLYMACILSW
Trigger: CCAACTTAAAATGCAAGCCATGTACAGAGAATGAACAGAGGGCCAGAAATGTGCTACGTTTGCCTGTGTATAACGTAGGGCTAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519092.5
ENST00000522064.5
ENST00000523287.5
ENST00000523600.1
CDS CCA 90 bp TTCAACACCATCCTTTGCACAAACAAGAACTCCTTGAATATCCTGTaGTGTTGCTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCTTTGG +
Preference number: 5 (lower is better)
Translates to: FNTILCTNKNSLNIL*CCSGLFLEREQELW
Trigger: CCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGTGCAAAGGATGGTGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523600.1
CDS-3UTR CAA 90 bp TCTCAGGTATCTGTGGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCACTTCCTTGGTTTTGCTaGACGGAGGTGCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: SQVSVECKIWVLMARGLPLPWFC*TEVPEF
Trigger: AAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAG...TGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp GGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCATTTGTGGAAAAGGGGGTCAATATCCTTCCTaGGTTTTGCTTGACGGAGGT +
Preference number: 5 (lower is better)
Translates to: GMQDLGLNGKRVAICGKGGQYPS*VLLDGG
Trigger: ACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACC...CCCTTTTCCACAAATGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTGGTGTTGCTCAGGCTaGTTCTTGGAAAGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSWCCSG*FLEREQ
Trigger: CTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS TCA 90 bp ACATGCTTCTGGATTTCAACTAGAACAGGTGCATCAAGCTGCTCATaGAGAATCTTCCCCCAGCCACCACTTAAATGCATTACCTGGTTC +
Preference number: 5 (lower is better)
Translates to: TCFWISTRTGASSCS*RIFPQPPLKCITWF
Trigger: GAACCAGGTAATGCATTTAAGTGGTGGCTGGGGGAAGATTCTTCATGAGCAGCTTGATGCACCTGTTCTAGTTGAAATCCAGAAGCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS GCA 90 bp AACGTAGCACATTTCTGGCCCTCTGTTCATTCTCTGTACATGGCTTaGATTTTAAGTTGGAATTCAAGGTGGAAGTGGGAAGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: NVAHFWPSVHSLYMA*ILSWNSRWKWEGKA
Trigger: GGCCTTTCCTTCCCACTTCCACCTTGAATTCCAACTTAAAATGCAAGCCATGTACAGAGAATGAACAGAGGGCCAGAAATGTGCTACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519092.5
ENST00000522064.5
ENST00000523287.5
ENST00000523600.1
CDS-3UTR CAA 90 bp GAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCATAAAATTCATGCCGGACTaGCTCCATCTTACTTGTGAG +
Preference number: 5 (lower is better)
Translates to: EWQKEQRMWQKDIALACIKFMPD*LHLTCE
Trigger: CTCACAAGTAAGATGGAGCAAGTCCGGCATGAATTT...TATGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp GAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTGCATACAAGAGGGTTGCCATTaGTGGAAAAGGGTCAATATC +
Preference number: 5 (lower is better)
Translates to: EWQKEQRMWQKDIALACIQEGCH*WKRVNI
Trigger: GATATTGACCCTTTTCCACAAATGGCAACCCTCTTG...TATGCAAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp GGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCATTTGTGGAAAAGGGTTAATGGCAAGAGGGTaGCCATTTGTGGAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: GMQDLGLNGKRVAICGKGLMARG*PFVEKG
Trigger: ACCCTTTTCCACAAATGGCAACCCTCTTGCCATTAA...CCCTTTTCCACAAATGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp CCTAGGTTCTTCTGTATAAGCGTATCTTCTATCCAGCTGGGGCTTGAGACATTCTGTGGAATGCAAGATTaGGGTCTTAATGGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: PRFFCISVSSIQLGLETFCGMQD*GLNGKR
Trigger: CCTCTTGCCATTAAGACCCAAATCTTGCATTCCACA...GAATGTCTCAAGCCCCAGCTGGATAGAAGATACGCTTATACAGAAGAACCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCTTCCTTGGTTTTGCTaGACGGAGGTGCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSLPWFC*TEVPEF
Trigger: AAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGTAGAAAAGCTGATGATAAGCCTGCAGGTCAAACCAAAAGTACACACTGTTCTCTATCCAGCTGGGGCTaGAGACATTCAGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: GRKADDKPAGQTKSTHCSLSSWG*RHSEMS
Trigger: TGACATTTCTGAATGTCTCAAGCCCCAGCTGGATAG...AGAACAGTGTGTACTTTTGGTTTGACCTGCAGGCTTATCATCAGCTTTTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCTATCCAGCTGGGGCTaGAGACATTCAGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSLSSWG*RHSEMS
Trigger: TGACATTTCTGAATGTCTCAAGCCCCAGCTGGATAG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCTGCAAACTGTTCACTaGCAAGAAACAATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSLQTVH*QETMAA
Trigger: GGCTGCCATTGTTTCTTGCAAGTGAACAGTTTGCAG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATGCTCAGGCTTGTTCTaGGAAAGGGAGCAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLECSGLF*EREQEL
Trigger: AAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS GCA 90 bp TATTGCCAATGTCATAAGTCCTATGAGAAATACACCAGTCCGCCCTaGTCTCTGGTCCAGCGCTCTCATTCTTTGAACTTAAACTTGTTT +
Preference number: 5 (lower is better)
Translates to: YCQCHKSYEKYTSPP*SLVQRSHSLNLNLF
Trigger: AAACAAGTTTAAGTTCAAAGAATGAGAGCGCTGGACCAGAGAGCAGGGCGGACTGGTGTATTTCTCATAGGACTTATGACATTGGCAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360863.11
ENST00000519725.5
ENST00000520923.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CCA 90 bp CAGATACATGTGCCCTTTCTCAATCACATCATCCTTAGAAGAACCTaGATACAAAAGCTCCCGCTTCCAAGGCTTTTGAGTTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: QIHVPFLNHIILRRT*IQKLPLPRLLSCCF
Trigger: AAAACAGCAACTCAAAAGCCTTGGAAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGATGTGATTGAGAAAGGGCACATGTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524182.1
CDS-3UTR CAA 90 bp TCTCAGGTATCTGTGGAATGCAAGATTTGGGTCTTAATGGCAAGAGGGTTGCCAACTTGTGAGACCAATTaGGCTAACCTGTATTCAAAG +
Preference number: 5 (lower is better)
Translates to: SQVSVECKIWVLMARGLPTCETN*ANLYSK
Trigger: CTTTGAATACAGGTTAGCCAAATTGGTCTCACAAGT...TGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp CCTAGGTTCTTCTGTATAAGCGTATCTTCTATCCAGCTGGGGCTTGAGACATTCAGGGTAACGAAAAGGTaGATACTGTTTGCTGACTTT +
Preference number: 5 (lower is better)
Translates to: PRFFCISVSSIQLGLETFRVTKR*ILFADF
Trigger: AAAGTCAGCAAACAGTATCAACCTTTTCGTTACCCT...GAATGTCTCAAGCCCCAGCTGGATAGAAGATACGCTTATACAGAAGAACCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp CCCTTTCTCAATCACATCATCCTTAGAAGAACCTGGATACAAAAGCTCCCGCTTCTTCTCAAGATGTCTTaGATGTCTTCCAGGATCCTT +
Preference number: 5 (lower is better)
Translates to: PFLNHIILRRTWIQKLPLLLKMS*MSSRIL
Trigger: AAGGATCCTGGAAGACATCAAAGACATCTTGAGAAG...AAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGATGTGATTGAGAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGGTCAATATCCTTCCTaGGTTTTGCTTGACGGAGGT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSGQYPS*VLLDGG
Trigger: ACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCAAGAGGGTTGCCATTaGTGGAAAAGGGTCAATATC +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSQEGCH*WKRVNI
Trigger: GATATTGACCCTTTTCCACAAATGGCAACCCTCTTG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACTATCCAGCTGGGGCTaGAGACATTCAGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSLSSWG*RHSEMS
Trigger: TGACATTTCTGAATGTCTCAAGCCCCAGCTGGATAG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAGGCTTCTATATACTTaGAGTAGCACCAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSRLLYT*SSTRLA
Trigger: AGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAAGGGAGCAGGAGCTTaGGTGTGTCAATCTAATTTC +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSKGAGA*VCQSNF
Trigger: GAAATTAGATTGACACACCAAAGCTCCTGCTCCCTT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGAATATCCTGTGGTGTaGCTCAGGCTTGTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSEYPVV*LRLVLG
Trigger: TCCAAGAACAAGCCTGAGCAACACCACAGGATATTC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS TCA 90 bp CTTCTGGCTGCTGTGGGCAGACATATTCTTTTTCAAAGACATAGTTaGAGAGCTAGCCTTAAAATTTGTGAGAGGTTGCAAGCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: LLAAVGRHILFQRHS*RASLKICERLQACK
Trigger: TTTGCAGGCTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCACAGCAGCCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS GCA 90 bp TCACTTGCAAGAAACAATGGCAGCCATACATTTTCTAGCCTATTTTaGACATGCTTCTGGATTTCAACTAGAACAGGTGCATCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: SLARNNGSHTFSSLF*TCFWISTRTGASSC
Trigger: GCAGCTTGATGCACCTGTTCTAGTTGAAATCCAGAAGCATGTGCAAAATAGGCTAGAAAATGTATGGCTGCCATTGTTTCTTGCAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS GCA 90 bp ACATATGGTCCTAACTCCTTCCGGTGTTCAATAATCTTCTGGGCTTaGTCTACTGGAATGTCAATTTGTAAAGCTGGTGGAATACTGGAA +
Preference number: 5 (lower is better)
Translates to: TYGPNSFRCSIIFWA*STGMSICKAGGILE
Trigger: TTCCAGTATTCCACCAGCTTTACAAATTGACATTCCAGTAGAGCAAGCCCAGAAGATTATTGAACACCGGAAGGAGTTAGGACCATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS GCA 90 bp TTGCTGATTTCAAATACAGTAATCCCATGGCAACAATTTAATTGCTaGCTTTTTGCCTGCGATCCCAGATTTCTCGTTTGGGACTGGACA +
Preference number: 5 (lower is better)
Translates to: LLISNTVIPWQQFNC*LFACDPRFLVWDWT
Trigger: TGTCCAGTCCCAAACGAGAAATCTGGGATCGCAGGCAAAAAGGCAGCAATTAAATTGTTGCCATGGGATTACTGTATTTGAAATCAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518474.1
ENST00000520923.5
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTTGCCTCTGAAAAGGTaGGAAGGCTTAGGAATTCAT +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSLPLKR*EGLGIH
Trigger: ATGAATTCCTAAGCCTTCCAACCTTTTCAGAGGCAA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTTTCTGGATCTCAGGTATCTGTGGAATGCAAGATTTGGGTCTTAATGGCAAGATTGCCTCTGAAAAGGTaGGAAGGCTTAGGAATTCAT +
Preference number: 5 (lower is better)
Translates to: LSGSQVSVECKIWVLMARLPLKR*EGLGIH
Trigger: ATGAATTCCTAAGCCTTCCAACCTTTTCAGAGGCAA...TCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTGAGATCCAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCATCGGGGGCATTCATTaGAACAGGTTTAACCTCATT +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSIGGIH*NRFNLI
Trigger: AATGAGGTTAAACCTGTTCAAATGAATGCCCCCGAT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAAATTCATGCCGGACTaGCTCCATCTTACTTGTGAG +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSKFMPD*LHLTCE
Trigger: CTCACAAGTAAGATGGAGCAAGTCCGGCATGAATTT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTCAATCACATCATCCTTAGAAGAACCTGGATACAAAAGCTCCCGCTTCCAAGGATGTTGAGAAATGCATaGTCAGGCTTTCATCAACAT +
Preference number: 5 (lower is better)
Translates to: LNHIILRRTWIQKLPLPRMLRNA*SGFHQH
Trigger: ATGTTGATGAAAGCCTGACAATGCATTTCTCAACAT...CCTTGGAAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGATGTGATTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp GTCAAGAGTGGCAGAAGGAGCAACGTATGTGGCAAAAAGATATTGCGCTTGCTTAAAATTCTTCACATGTaGAGAAATGCATTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: VKSGRRSNVCGKKILRLLKILHM*RNALSG
Trigger: GCCTGACAATGCATTTCTCAACATGTGAAGAATTTT...AAGCAAGCGCAATATCTTTTTGCCACATACGTTGCTCCTTCTGCCACTCTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCTTCTCAAGATGTCTTaGATGTCTTCCAGGATCCTT +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSLLKMS*MSSRIL
Trigger: AAGGATCCTGGAAGACATCAAAGACATCTTGAGAAG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACTTCCTTGGTTTTGCTaGACGGAGGTGCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLELPWFC*TEVPEF
Trigger: AAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACAAGAGGGTTGCCATTaGTGGAAAAGGGTCAATATC +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSQEGCH*WKRVNI
Trigger: GATATTGACCCTTTTCCACAAATGGCAACCCTCTTG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATGTGGAATGCAAGATTaGGGTCTTAATGGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSCGMQD*GLNGKR
Trigger: CCTCTTGCCATTAAGACCCAAATCTTGCATTCCACA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACTATCCAGCTGGGGCTaGAGACATTCAGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLELSSWG*RHSEMS
Trigger: TGACATTTCTGAATGTCTCAAGCCCCAGCTGGATAG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACCGATTTTACCATCTTaGTCCATGGCTCAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSPILPS*SMAQEG
Trigger: TCCTTCTTGAGCCATGGACAAAGATGGTAAAATCGG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGTGTCCTCAGCTTTCTaGGAAAATGTCTCTTTATGC +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSVSSAF*ENVSLC
Trigger: GCATAAAGAGACATTTTCCAAGAAAGCTGAGGACAC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCTGAGTAAAGCAGTTTaGATAGCAGGCACTGAAGTA +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSLSKAV*IAGTEV
Trigger: TACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAGGCTTCTATATACTTaGAGTAGCACCAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSRLLYT*SSTRLA
Trigger: AGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCGGTTTAAAGAATTCCTaGAACCTATCAGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSGLKNS*NLSAAG
Trigger: TCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACC...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTCAAACAAGAACTCCTaGAATATCCTGTGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSSNKNS*NILWCC
Trigger: GCAACACCACAGGATATTCAAGGAGTTCTTGTTTGA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS CCA 90 bp CAATTTAATTGCTGCCTTTTTGCCTGCGATCCCAGATTTCTCGTTTaGGACTGGACACAATTTTCATTTCTCTGTGTACTTAGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: QFNCCLFACDPRFLV*DWTQFSFLCVLSAS
Trigger: TGAAGCACTAAGTACACAGAGAAATGAAAATTGTGTCCAGTCCCAAACGAGAAATCTGGGATCGCAGGCAAAAAGGCAGCAATTAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518474.1
ENST00000520923.5
CDS-3UTR CAA 90 bp AGGCTGAAGTGTTTCTTGGTAGAAAAGCTGATGATAAGCCTGCAGGTCAAACCATTGTTTTTCCAGAAATaGTGGAGCATCATTAGCTAC +
Preference number: 5 (lower is better)
Translates to: RLKCFLVEKLMISLQVKPLFFQK*WSIISY
Trigger: GTAGCTAATGATGCTCCACAATTTCTGGAAAAACAA...TGGTTTGACCTGCAGGCTTATCATCAGCTTTTCTACCAAGAAACACTTCAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAATCGGGGGCATTCATTaGAACAGGTTTAACCTCATT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSIGGIH*NRFNLI
Trigger: AATGAGGTTAAACCTGTTCAAATGAATGCCCCCGAT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAGGGTAACGAAAAGGTaGATACTGTTTGCTGACTTT +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSRVTKR*ILFADF
Trigger: AAAGTCAGCAAACAGTATCAACCTTTTCGTTACCCT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCAAGAGGGTTGCCATTTGTGGAAAAGGGTCAATATCCTTCCTTGGTTTTGCTTCAGCGCTCTCATTCTTaGAACTTAAACTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: ARGLPFVEKGQYPSLVLLQRSHS*NLNLFV
Trigger: AACAAACAAGTTTAAGTTCAAAGAATGAGAGCGCTG...AAGCAAAACCAAGGAAGGATATTGACCCTTTTCCACAAATGGCAACCCTCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACTTCTCAAGATGTCTTaGATGTCTTCCAGGATCCTT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSLLKMS*MSSRIL
Trigger: AAGGATCCTGGAAGACATCAAAGACATCTTGAGAAG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCCTTCCTTGGTTTTGCTaGACGGAGGTGCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLPWFC*TEVPEF
Trigger: AAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAG...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGGTCAATATCCTTCCTaGGTTTTGCTTGACGGAGGT +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTGQYPS*VLLDGG
Trigger: ACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATTAATGGCAAGAGGGTaGCCATTTGTGGAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLELMARG*PFVEKG
Trigger: ACCCTTTTCCACAAATGGCAACCCTCTTGCCATTAA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCCTATCCAGCTGGGGCTaGAGACATTCAGAAATGTCA +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLSSWG*RHSEMS
Trigger: TGACATTTCTGAATGTCTCAAGCCCCAGCTGGATAG...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTTTCTGGATCTCAGGTATCTGTGGAATGCAAGATTTGGGTCTTAATGGCAAGATGTGGCAAAAAGATATaGCGCTTGCTTGCATACTTT +
Preference number: 5 (lower is better)
Translates to: LSGSQVSVECKIWVLMARCGKKI*RLLAYF
Trigger: AAAGTATGCAAGCAAGCGCAATATCTTTTTGCCACA...TCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCTGAGATCCAGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCGATTTTACCATCTTaGTCCATGGCTCAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLEPILPS*SMAQEG
Trigger: TCCTTCTTGAGCCATGGACAAAGATGGTAAAATCGG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCCTGCAAACTGTTCACTaGCAAGAAACAATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLQTVH*QETMAA
Trigger: GGCTGCCATTGTTTCTTGCAAGTGAACAGTTTGCAG...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAGGCTTCTATATACTTaGAGTAGCACCAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLERLLYT*SSTRLA
Trigger: AGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAAAATTTGTGAGAGGTaGCAAGCCTGCAAACAACTT +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSKICER*QACKQL
Trigger: AAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGGTTTAAAGAATTCCTaGAACCTATCAGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSGLKNS*NLSAAG
Trigger: TCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACC...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS TCA 90 bp AGCTGGGGCTTGAGACATTCAGAAATGTCAGTAAAAGATGTTAAATaGATGACTTTGCTGCTTTCTGACATGTACTTTGACCTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: SWGLRHSEMSVKDVK*MTLLLSDMYFDLAG
Trigger: ACCTGCAAGGTCAAAGTACATGTCAGAAAGCAGCAAAGTCATTCATTTAACATCTTTTACTGACATTTCTGAATGTCTCAAGCCCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518474.1
CDS GCA 90 bp CATCTTTGTCCATGGCTCAAGAAGGAGGAGAAGGATATATTCCTCTaGTGTGTCAAAAAGGTCTTCAAATGGTGGCTGTATTTTCATATA +
Preference number: 5 (lower is better)
Translates to: HLCPWLKKEEKDIFL*CVKKVFKWWLYFHI
Trigger: TATATGAAAATACAGCCACCATTTGAAGACCTTTTTGACACAGCAGAGGAATATATCCTTCTCCTCCTTCTTGAGCCATGGACAAAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000517828.5
ENST00000519421.1
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS GCA 90 bp AATACAGTAATCCCATGGCAACAATTTAATTGCTGCCTTTTTGCCTaGGATCCCAGATTTCTCGTTTGGGACTGGACACAATTTTCATTT +
Preference number: 5 (lower is better)
Translates to: NTVIPWQQFNCCLFA*DPRFLVWDWTQFSF
Trigger: AAATGAAAATTGTGTCCAGTCCCAAACGAGAAATCTGGGATCGCAGGCAAAAAGGCAGCAATTAAATTGTTGCCATGGGATTACTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518474.1
ENST00000520923.5
CDS CCA 90 bp CACCTTTTTATAAGCAATTTGGTCCGATTTTACCATCTTTGTCCATaGCTCAAGAAGGAGGAGAAGGATATATTCCTCTGCTGTGTCAAA +
Preference number: 5 (lower is better)
Translates to: HLFISNLVRFYHLCP*LKKEEKDIFLCCVK
Trigger: TTTGACACAGCAGAGGAATATATCCTTCTCCTCCTTCTTGAGCCATGGACAAAGATGGTAAAATCGGACCAAATTGCTTATAAAAAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000517828.5
ENST00000519421.1
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CCA 90 bp CTAAATACATATGGTCCTAACTCCTTCCGGTGTTCAATAATCTTCTaGGCTTGCTCTACTGGAATGTCAATTTGTAAAGCTGGTGGAATA +
Preference number: 5 (lower is better)
Translates to: LNTYGPNSFRCSIIF*ACSTGMSICKAGGI
Trigger: TATTCCACCAGCTTTACAAATTGACATTCCAGTAGAGCAAGCCCAGAAGATTATTGAACACCGGAAGGAGTTAGGACCATATGTATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTGAAGTGTTTCTTGGTAGAAAAGCTGATGATAAGCCTGCAGGTCAAACCAAACAAGGAAATCATCTGTaGCCAGAGAATCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: AEVFLGRKADDKPAGQTKQGNHL*PENLQI
Trigger: AATTTGAAGATTCTCTGGCAACAGATGATTTCCTTG...TTTGGTTTGACCTGCAGGCTTATCATCAGCTTTTCTACCAAGAAACACTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCAAGGAAATCATCTGTaGCCAGAGAATCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSQGNHL*PENLQI
Trigger: AATTTGAAGATTCTCTGGCAACAGATGATTTCCTTG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTTGTTTTTCCAGAAATaGTGGAGCATCATTAGCTAC +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSLFFQK*WSIISY
Trigger: GTAGCTAATGATGCTCCACAATTTCTGGAAAAACAA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAATCGGGGGCATTCATTaGAACAGGTTTAACCTCATT +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLEIGGIH*NRFNLI
Trigger: AATGAGGTTAAACCTGTTCAAATGAATGCCCCCGAT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAGGGTAACGAAAAGGTaGATACTGTTTGCTGACTTT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSRVTKR*ILFADF
Trigger: AAAGTCAGCAAACAGTATCAACCTTTTCGTTACCCT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCAAAATTCTTCACATGTaGAGAAATGCATTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSKILHM*RNALSG
Trigger: GCCTGACAATGCATTTCTCAACATGTGAAGAATTTT...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCAGCGCTCTCATTCTTaGAACTTAAACTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSQRSHS*NLNLFV
Trigger: AACAAACAAGTTTAAGTTCAAAGAATGAGAGCGCTG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAACTTCCTTGGTTTTGCTaGACGGAGGTGCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKLPWFC*TEVPEF
Trigger: AAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAG...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGGTCAATATCCTTCCTaGGTTTTGCTTGACGGAGGT +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKGQYPS*VLLDGG
Trigger: ACCTCCGTCAAGCAAAACCAAGGAAGGATATTGACC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTAATGGCAAGAGGGTaGCCATTTGTGGAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLMARG*PFVEKG
Trigger: ACCCTTTTCCACAAATGGCAACCCTCTTGCCATTAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTGTGGAATGCAAGATTaGGGTCTTAATGGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTCGMQD*GLNGKR
Trigger: CCTCTTGCCATTAAGACCCAAATCTTGCATTCCACA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAACTTCAGGTGATTTATaGGGAGATTTAGGAGGTTGT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSTSGDL*GDLGGC
Trigger: ACAACCTCCTAAATCTCCCAATAAATCACCTGAAGT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TTGGGAGATTTAGGAGGTTGTGATAAGCTGAATTCTTCTTTCTGGATCTCAGGTACTTCAGGTGATTTATaGGGAGATTTAGGAGGTTGT +
Preference number: 5 (lower is better)
Translates to: LGDLGGCDKLNSSFWISGTSGDL*GDLGGC
Trigger: ACAACCTCCTAAATCTCCCAATAAATCACCTGAAGT...ACCTGAGATCCAGAAAGAAGAATTCAGCTTATCACAACCTCCTAAATCTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519725.5
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATGTGGCAAAAAGATATaGCGCTTGCTTGCATACTTT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSCGKKI*RLLAYF
Trigger: AAAGTATGCAAGCAAGCGCAATATCTTTTTGCCACA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAGTGTCCTCAGCTTTCTaGGAAAATGTCTCTTTATGC +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLEVSSAF*ENVSLC
Trigger: GCATAAAGAGACATTTTCCAAGAAAGCTGAGGACAC...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTCAAACTCCAGTTTGTaGTTAAGCAGATCACTAAAC +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSSNSSL*LSRSLN
Trigger: GTTTAGTGATCTGCTTAACAACAAACTGGAGTTTGA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCTGTTCAAACTCCAGTTaGTTGTTAAGCAGATCACTA +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSCSNSS*LLSRSL
Trigger: TAGTGATCTGCTTAACAACAAACTGGAGTTTGAACA...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAATAATCTTCTGGGCTaGCTCTACTGGAATGTCAAT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSNNLLG*LYWNVN
Trigger: ATTGACATTCCAGTAGAGCAAGCCCAGAAGATTATT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACTGAGTAAAGCAGTTTaGATAGCAGGCACTGAAGTA +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLELSKAV*IAGTEV
Trigger: TACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCAGGCTTCTATATACTTaGAGTAGCACCAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTRLLYT*SSTRLA
Trigger: AGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517843.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAGCAGCCACATAAGATCCATCTaGAAGAATGAGTCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: ASHVSRIWFKEFLEPISSHIRSI*KNESQE
Trigger: TTCTTGAGACTCATTCTTCAAGATGGATCTTATGTG...GCTGCTGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACAAGGAAATCATCTGTaGCCAGAGAATCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSQGNHL*PENLQI
Trigger: AATTTGAAGATTCTCTGGCAACAGATGATTTCCTTG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTGCCTCTGAAAAGGTaGGAAGGCTTAGGAATTCAT +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLPLKR*EGLGIH
Trigger: ATGAATTCCTAAGCCTTCCAACCTTTTCAGAGGCAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATTGTTTTTCCAGAAATaGTGGAGCATCATTAGCTAC +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSLFFQK*WSIISY
Trigger: GTAGCTAATGATGCTCCACAATTTCTGGAAAAACAA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAACTTGTGAGACCAATTaGGCTAACCTGTATTCAAAG +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLETCETN*ANLYSK
Trigger: CTTTGAATACAGGTTAGCCAAATTGGTCTCACAAGT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAATGTTGAGAAATGCATaGTCAGGCTTTCATCAACAT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSMLRNA*SGFHQH
Trigger: ATGTTGATGAAAGCCTGACAATGCATTTCTCAACAT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCAAAAATTCTTCACATGTaGAGAAATGCATTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSKILHM*RNALSG
Trigger: GCCTGACAATGCATTTCTCAACATGTGAAGAATTTT...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCACAGCGCTCTCATTCTTaGAACTTAAACTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSQRSHS*NLNLFV
Trigger: AACAAACAAGTTTAAGTTCAAAGAATGAGAGCGCTG...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAACAAGAGGGTTGCCATTaGTGGAAAAGGGTCAATATC +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKQEGCH*WKRVNI
Trigger: GATATTGACCCTTTTCCACAAATGGCAACCCTCTTG...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATTAATGGCAAGAGGGTaGCCATTTGTGGAAAAGGGT +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKLMARG*PFVEKG
Trigger: ACCCTTTTCCACAAATGGCAACCCTCTTGCCATTAA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATGTGGAATGCAAGATTaGGGTCTTAATGGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKCGMQD*GLNGKR
Trigger: CCTCTTGCCATTAAGACCCAAATCTTGCATTCCACA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAACTTCAGGTGATTTATaGGGAGATTTAGGAGGTTGT +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLETSGDL*GDLGGC
Trigger: ACAACCTCCTAAATCTCCCAATAAATCACCTGAAGT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAACCGATTTTACCATCTTaGTCCATGGCTCAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKPILPS*SMAQEG
Trigger: TCCTTCTTGAGCCATGGACAAAGATGGTAAAATCGG...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGTGTCCTCAGCTTTCTaGGAAAATGTCTCTTTATGC +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTVSSAF*ENVSLC
Trigger: GCATAAAGAGACATTTTCCAAGAAAGCTGAGGACAC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATCAAACTCCAGTTTGTaGTTAAGCAGATCACTAAAC +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSSNSSL*LSRSLN
Trigger: GTTTAGTGATCTGCTTAACAACAAACTGGAGTTTGA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAAATAATCTTCTGGGCTaGCTCTACTGGAATGTCAAT +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLENNLLG*LYWNVN
Trigger: ATTGACATTCCAGTAGAGCAAGCCCAGAAGATTATT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCCTGAGTAAAGCAGTTTaGATAGCAGGCACTGAAGTA +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLSKAV*IAGTEV
Trigger: TACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517843.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAGGCTTCTATATACTTaGAGTAGCACCAGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKRLLYT*SSTRLA
Trigger: AGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517843.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCGGCTTGCATTTTAAGTaGGAATTCAAGGTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTGLHFK*EFKVEV
Trigger: CACTTCCACCTTGAATTCCAACTTAAAATGCAAGCC...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR CAA 90 bp CTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACCTATCATTCTCTGTACATGGCTaGCATTTTAAGTTGGAATTC +
Preference number: 5 (lower is better)
Translates to: LELLMSAESGLKNSLNLSFSVHG*HFKLEF
Trigger: GAATTCCAACTTAAAATGCAAGCCATGTACAGAGAA...TGATAGGTTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAACAAGGAAATCATCTGTaGCCAGAGAATCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLEQGNHL*PENLQI
Trigger: AATTTGAAGATTCTCTGGCAACAGATGATTTCCTTG...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCACTTGTGAGACCAATTaGGCTAACCTGTATTCAAAG +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTTCETN*ANLYSK
Trigger: CTTTGAATACAGGTTAGCCAAATTGGTCTCACAAGT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAAATGTTGAGAAATGCATaGTCAGGCTTTCATCAACAT +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLEMLRNA*SGFHQH
Trigger: ATGTTGATGAAAGCCTGACAATGCATTTCTCAACAT...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCACTTCAGGTGATTTATaGGGAGATTTAGGAGGTTGT +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTTSGDL*GDLGGC
Trigger: ACAACCTCCTAAATCTCCCAATAAATCACCTGAAGT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTGTGGCAAAAAGATATaGCGCTTGCTTGCATACTTT +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTCGKKI*RLLAYF
Trigger: AAAGTATGCAAGCAAGCGCAATATCTTTTTGCCACA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATCAAACTCCAGTTTGTaGTTAAGCAGATCACTAAAC +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLESNSSL*LSRSLN
Trigger: GTTTAGTGATCTGCTTAACAACAAACTGGAGTTTGA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp CAAATCACTGGAGCTTCTCATGTCAGCAGAATCTGGTTTAAAGAATTCCTTGAATGTTCAAACTCCAGTTaGTTGTTAAGCAGATCACTA +
Preference number: 5 (lower is better)
Translates to: QITGASHVSRIWFKEFLECSNSS*LLSRSL
Trigger: TAGTGATCTGCTTAACAACAAACTGGAGTTTGAACA...TTCAAGGAATTCTTTAAACCAGATTCTGCTGACATGAGAAGCTCCAGTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCAATAATCTTCTGGGCTaGCTCTACTGGAATGTCAAT +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTNNLLG*LYWNVN
Trigger: ATTGACATTCCAGTAGAGCAAGCCCAGAAGATTATT...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAACTGAGTAAAGCAGTTTaGATAGCAGGCACTGAAGTA +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKLSKAV*IAGTEV
Trigger: TACTTCAGTGCCTGCTATCAAAACTGCTTTACTCAG...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517843.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAGGTTTAAAGAATTCCTaGAACCTATCAGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKGLKNS*NLSAAG
Trigger: TCCTGCTGCTGATAGGTTCAAGGAATTCTTTAAACC...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTGTTTTTCCAGAAATaGTGGAGCATCATTAGCTAC +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTLFFQK*WSIISY
Trigger: GTAGCTAATGATGCTCCACAATTTCTGGAAAAACAA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAACTTGTGAGACCAATTaGGCTAACCTGTATTCAAAG +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKTCETN*ANLYSK
Trigger: CTTTGAATACAGGTTAGCCAAATTGGTCTCACAAGT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360863.11
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAGGGTAACGAAAAGGTaGATACTGTTTGCTGACTTT +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKRVTKR*ILFADF
Trigger: AAAGTCAGCAAACAGTATCAACCTTTTCGTTACCCT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCCAGCGCTCTCATTCTTaGAACTTAAACTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTQRSHS*NLNLFV
Trigger: AACAAACAAGTTTAAGTTCAAAGAATGAGAGCGCTG...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATGTGGCAAAAAGATATaGCGCTTGCTTGCATACTTT +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKCGKKI*RLLAYF
Trigger: AAAGTATGCAAGCAAGCGCAATATCTTTTTGCCACA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp GGAAAATCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTGTTCAAACTCCAGTTaGTTGTTAAGCAGATCACTA +
Preference number: 5 (lower is better)
Translates to: GKSRIKLYLDVRLALIQTCSNSS*LLSRSL
Trigger: TAGTGATCTGCTTAACAACAAACTGGAGTTTGAACA...GGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGATTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAAAATTTGTGAGAGGTaGCAAGCCTGCAAACAACTT +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKKICER*QACKQL
Trigger: AAGTTGTTTGCAGGCTTGCAACCTCTCACAAATTTT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS TCA 90 bp AGCTGGGGCTTGAGACATTCAGAAATGTCAGTAAAAGATGTTAAATaGATGACTTTGCTGCTTTCTGACATGTACTTTGACCTAAATTAT +
Preference number: 5 (lower is better)
Translates to: SWGLRHSEMSVKDVK*MTLLLSDMYFDLNY
Trigger: ATAATTTAGGTCAAAGTACATGTCAGAAAGCAGCAAAGTCATTCATTTAACATCTTTTACTGACATTTCTGAATGTCTCAAGCCCCAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517769.5
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAACAAGGAAATCATCTGTaGCCAGAGAATCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKQGNHL*PENLQI
Trigger: AATTTGAAGATTCTCTGGCAACAGATGATTTCCTTG...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAATGTTGAGAAATGCATaGTCAGGCTTTCATCAACAT +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKMLRNA*SGFHQH
Trigger: ATGTTGATGAAAGCCTGACAATGCATTTCTCAACAT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAAAAAATTCTTCACATGTaGAGAAATGCATTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKKILHM*RNALSG
Trigger: GCCTGACAATGCATTTCTCAACATGTGAAGAATTTT...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS-3UTR CAA 90 bp TCCAGAATCAAACTTTATTTAGATGTTAGGCTTGCTCTGATACAGACCTTCAAATGTTCAAACTCCAGTTaGTTGTTAAGCAGATCACTA +
Preference number: 5 (lower is better)
Translates to: SRIKLYLDVRLALIQTFKCSNSS*LLSRSL
Trigger: TAGTGATCTGCTTAACAACAAACTGGAGTTTGAACA...TTTGAAGGTCTGTATCAGAGCAAGCCTAACATCTAAATAAAGTTTGATTCTGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360863.11
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 90 bp GGCTCCGGAGCTACGCTGGCTAGCGTGGCCGGCGCCGCGCCGGGGTaGCTATGGAGCTTAGACAATACGGCCGCCCAGGGAGGCCGAGGC +
Preference number: 6 (lower is better)
Translates to: GSGATLASVAGAAPG*LWSLDNTAAQGGRG
Trigger: GCCTCGGCCTCCCTGGGCGGCCGTATTGTCTAAGCTCCATAGCAACCCCGGCGCGGCGCCGGCCACGCTAGCCAGCGTAGCTCCGGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617334.1
CDS CCA 72 bp CTGGCTAGCGTGGCCGGCGCCGCGCCGGGGTTGCTATaGAGCTTAGACAATACGGCCGCCCAGGGAGGCCGA +
Preference number: 6 (lower is better)
Translates to: LASVAGAAPGLL*SLDNTAAQGGR
Trigger: TCGGCCTCCCTGGGCGGCCGTATTGTCTAAGCTCCATAGCAACCCCGGCGCGGCGCCGGCCACGCTAGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617334.1
CDS CAA 72 bp GCTACGCTGGCTAGCGTGGCCGGCGCCGCGCCGGGGTaGCTATGGAGCTTAGACAATACGGCCGCCCAGGGA +
Preference number: 6 (lower is better)
Translates to: ATLASVAGAAPG*LWSLDNTAAQG
Trigger: TCCCTGGGCGGCCGTATTGTCTAAGCTCCATAGCAACCCCGGCGCGGCGCCGGCCACGCTAGCCAGCGTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617334.1
CDS CCA 72 bp CAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGTaGGAGGCAAAAGGTACTTCTTACATGGTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: QFHMAGEASESW*EAKGTSYMVVE
Trigger: CTCCACCACCATGTAAGAAGTACCTTTTGCCTCCCACCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520117.5
CDS CCA 72 bp CTTCAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGTGGGAGGCAAAAGGTACTTCTTACATGGTGGTG +
Preference number: 6 (lower is better)
Translates to: LQFHMAGEASES*WEAKGTSYMVV
Trigger: CACCACCATGTAAGAAGTACCTTTTGCCTCCCACCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520117.5
CDS CAA 90 bp CCTGTGGTGTTGCTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCTTaGGTGTGTCAATCTAATTTCCATAATGGGTCCAGAGACCTAGTG +
Preference number: 6 (lower is better)
Translates to: PVVLLRLVLGKGAGA*VCQSNFHNGSRDLV
Trigger: CACTAGGTCTCTGGACCCATTATGGAAATTAGATTGACACACCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523287.5
ENST00000523600.1
CDS CAA 72 bp AAGAACTCCTTGAATATCCTGTGGTGTTGCTCAGGCTaGTTCTTGGAAAGGGAGCAGGAGCTTTGGTGTGTC +
Preference number: 6 (lower is better)
Translates to: KNSLNILWCCSG*FLEREQELWCV
Trigger: GACACACCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523287.5
ENST00000523600.1
CDS CAA 90 bp CACCATCCTTTGCACAAACAAGAACTCCTTGAATATCCTGTGGTGTaGCTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCTTTGGTGTGT +
Preference number: 6 (lower is better)
Translates to: HHPLHKQELLEYPVV*LRLVLGKGAGALVC
Trigger: ACACACCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGTGCAAAGGATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523600.1
CDS CAA 90 bp GCCTCTGAAAAGGTCAAACAAGAACTCCTTGAATATCCTGTGGTGTaGCTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCTTTGGTGTGT +
Preference number: 6 (lower is better)
Translates to: ASEKVKQELLEYPVV*LRLVLGKGAGALVC
Trigger: ACACACCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGACCTTTTCAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS GCA 72 bp TGTCATAAGTCCTATGAGAAATACACCAGTCCGCCCTaGTCTCTGGTCCAGCGCTCTCATTCTTTGAACTTA +
Preference number: 6 (lower is better)
Translates to: CHKSYEKYTSPP*SLVQRSHSLNL
Trigger: TAAGTTCAAAGAATGAGAGCGCTGGACCAGAGAGCAGGGCGGACTGGTGTATTTCTCATAGGACTTATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360863.11
ENST00000519725.5
ENST00000520923.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS GCA 72 bp TGCACAAACAAGAACTCCTTGAATATCCTGTGGTGTTaGTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCTT +
Preference number: 6 (lower is better)
Translates to: CTNKNSLNILWC*SGLFLEREQEL
Trigger: AAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523600.1
CDS GCA 72 bp AGGTCAAACAAGAACTCCTTGAATATCCTGTGGTGTTaGTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCTT +
Preference number: 6 (lower is better)
Translates to: RSNKNSLNILWC*SGLFLEREQEL
Trigger: AAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS CCA 72 bp GCCCTACGTTATACACAGGCAAACGTAGCACATTTCTaGCCCTCTGTTCATTCTCTGTACATGGCTTGCATT +
Preference number: 6 (lower is better)
Translates to: ALRYTQANVAHF*PSVHSLYMACI
Trigger: AATGCAAGCCATGTACAGAGAATGAACAGAGGGCCAGAAATGTGCTACGTTTGCCTGTGTATAACGTAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519092.5
ENST00000522064.5
ENST00000523287.5
ENST00000523600.1
CDS CCA 72 bp TGCTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCTTTaGTGTGTCAATCTAATTTCCATAATGGGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: CSGLFLEREQEL*CVNLISIMGPE
Trigger: CTCTGGACCCATTATGGAAATTAGATTGACACACCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523287.5
ENST00000523600.1
CDS CAA 72 bp AGTCCGCCCTGCTCTCTGGTCCAGCGCTCTCATTCTTaGAACTTAAACTTGTTTGTTCTATCTCTTCTGACC +
Preference number: 6 (lower is better)
Translates to: SPPCSLVQRSHS*NLNLFVLSLLT
Trigger: GGTCAGAAGAGATAGAACAAACAAGTTTAAGTTCAAAGAATGAGAGCGCTGGACCAGAGAGCAGGGCGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360863.11
ENST00000519725.5
ENST00000520923.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 72 bp TTGCACAAACAAGAACTCCTTGAATATCCTGTGGTGTaGCTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: LHKQELLEYPVV*LRLVLGKGAGA
Trigger: AGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523600.1
CDS CAA 72 bp AAGGTCAAACAAGAACTCCTTGAATATCCTGTGGTGTaGCTCAGGCTTGTTCTTGGAAAGGGAGCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: KVKQELLEYPVV*LRLVLGKGAGA
Trigger: AGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS GCA 72 bp ATCCCATGGCAACAATTTAATTGCTGCCTTTTTGCCTaGGATCCCAGATTTCTCGTTTGGGACTGGACACAA +
Preference number: 6 (lower is better)
Translates to: IPWQQFNCCLFA*DPRFLVWDWTQ
Trigger: TTGTGTCCAGTCCCAAACGAGAAATCTGGGATCGCAGGCAAAAAGGCAGCAATTAAATTGTTGCCATGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518474.1
ENST00000520923.5
CDS CCA 72 bp ATCCTTTGCACAAACAAGAACTCCTTGAATATCCTGTaGTGTTGCTCAGGCTTGTTCTTGGAAAGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: ILCTNKNSLNIL*CCSGLFLEREQ
Trigger: CTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGTGCAAAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523600.1
CDS CCA 72 bp GTGCCCTTTCTCAATCACATCATCCTTAGAAGAACCTaGATACAAAAGCTCCCGCTTCCAAGGCTTTTGAGT +
Preference number: 6 (lower is better)
Translates to: VPFLNHIILRRT*IQKLPLPRLLS
Trigger: ACTCAAAAGCCTTGGAAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGATGTGATTGAGAAAGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524182.1
CDS CCA 72 bp CTGAAAAGGTCAAACAAGAACTCCTTGAATATCCTGTaGTGTTGCTCAGGCTTGTTCTTGGAAAGGGAGCAG +
Preference number: 6 (lower is better)
Translates to: LKRSNKNSLNIL*CCSGLFLEREQ
Trigger: CTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGACCTTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS CAA 90 bp AAACGTAGCACATTTCTGGCCCTCTGTTCATTCTCTGTACATGGCTaGCATTTTAAGTTGGAATTCAAGGTGGAAGTGGGAAGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: KRSTFLALCSFSVHG*HFKLEFKVEVGRKG
Trigger: GCCTTTCCTTCCCACTTCCACCTTGAATTCCAACTTAAAATGCAAGCCATGTACAGAGAATGAACAGAGGGCCAGAAATGTGCTACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519092.5
ENST00000522064.5
ENST00000523287.5
ENST00000523600.1
CDS CAA 90 bp TGCACAAACAAGAACTCCTTGAATATCCTGTGGTGTTGCTCAGGCTaGTTCTTGGAAAGGGAGCAGGAGCTTTGGTGTGTCAATCTAATT +
Preference number: 6 (lower is better)
Translates to: CTNKNSLNILWCCSG*FLEREQELWCVNLI
Trigger: AATTAGATTGACACACCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523600.1
CDS CAA 90 bp AGGTCAAACAAGAACTCCTTGAATATCCTGTGGTGTTGCTCAGGCTaGTTCTTGGAAAGGGAGCAGGAGCTTTGGTGTGTCAATCTAATT +
Preference number: 6 (lower is better)
Translates to: RSNKNSLNILWCCSG*FLEREQELWCVNLI
Trigger: AATTAGATTGACACACCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523287.5
CDS TCA 72 bp TGGATTTCAACTAGAACAGGTGCATCAAGCTGCTCATaGAGAATCTTCCCCCAGCCACCACTTAAATGCATT +
Preference number: 6 (lower is better)
Translates to: WISTRTGASSCS*RIFPQPPLKCI
Trigger: AATGCATTTAAGTGGTGGCTGGGGGAAGATTCTTCATGAGCAGCTTGATGCACCTGTTCTAGTTGAAATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000517828.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS GCA 72 bp CCTAACTCCTTCCGGTGTTCAATAATCTTCTGGGCTTaGTCTACTGGAATGTCAATTTGTAAAGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: PNSFRCSIIFWA*STGMSICKAGG
Trigger: TCCACCAGCTTTACAAATTGACATTCCAGTAGAGCAAGCCCAGAAGATTATTGAACACCGGAAGGAGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 72 bp GAAGAATTCTCTCCTGTTCTAAGGCTTCTATATACTTaGAGTAGCACCAGGTTGGCTGTCGGCCATATGGTT +
Preference number: 6 (lower is better)
Translates to: EEFSPVLRLLYT*SSTRLAVGHMV
Trigger: AACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATATAGAAGCCTTAGAACAGGAGAGAATTCTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000517843.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 90 bp CCAGCTCCACCTTTTTATAAGCAATTTGGTCCGATTTTACCATCTTaGTCCATGGCTCAAGAAGGAGGAGAAGGATATATTCCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: PAPPFYKQFGPILPS*SMAQEGGEGYIPLL
Trigger: CAGCAGAGGAATATATCCTTCTCCTCCTTCTTGAGCCATGGACAAAGATGGTAAAATCGGACCAAATTGCTTATAAAAAGGTGGAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000517828.5
ENST00000519421.1
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 90 bp AACAAGAACTCCTTGAATATCCTGTGGTGTTGCTCAGGCTTGTTCTaGGAAAGGGAGCAGGAGCTTTGGTGTGTCAATCTAATTTCCATA +
Preference number: 6 (lower is better)
Translates to: NKNSLNILWCCSGLF*EREQELWCVNLISI
Trigger: TATGGAAATTAGATTGACACACCAAAGCTCCTGCTCCCTTTCCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523287.5
ENST00000523600.1
CDS TCA 72 bp ATTTCAACACCATCCTTTGCACAAACAAGAACTCCTTaGATATCCTGTGGTGTTGCTCAGGCTTGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: ISTPSFAQTRTP*ISCGVAQACSW
Trigger: CCAAGAACAAGCCTGAGCAACACCACAGGATATTCAAGGAGTTCTTGTTTGTGCAAAGGATGGTGTTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523600.1
CDS CAA 72 bp GTACCTTTATCTTCTGACGTGCTGCAAACTGTTCACTaGCAAGAAACAATGGCAGCCATACATTTTCTAGCC +
Preference number: 6 (lower is better)
Translates to: VPLSSDVLQTVH*QETMAAIHFLA
Trigger: GGCTAGAAAATGTATGGCTGCCATTGTTTCTTGCAAGTGAACAGTTTGCAGCACGTCAGAAGATAAAGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS TCA 72 bp TTTTCACGATCCAGGGAGAAAAATTTGATCCTACTGTaGAATTCATGCCGGACTTGCTCCATCTTACTTGTG +
Preference number: 6 (lower is better)
Translates to: FSRSREKNLILL*NSCRTCSILLV
Trigger: CACAAGTAAGATGGAGCAAGTCCGGCATGAATTTCACAGTAGGATCAAATTTTTCTCCCTGGATCGTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360863.11
ENST00000519092.5
ENST00000519408.5
ENST00000519725.5
ENST00000520117.5
ENST00000520923.5
ENST00000523437.5
ENST00000617334.1
CDS GCA 72 bp TCAAATACAGTAATCCCATGGCAACAATTTAATTGCTaGCTTTTTGCCTGCGATCCCAGATTTCTCGTTTGG +
Preference number: 6 (lower is better)
Translates to: SNTVIPWQQFNC*LFACDPRFLVW
Trigger: CCAAACGAGAAATCTGGGATCGCAGGCAAAAAGGCAGCAATTAAATTGTTGCCATGGGATTACTGTATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518474.1
ENST00000520923.5
CDS GCA 72 bp GAATTCATTAAAGTAGTCTACAAGGAAATCATCTGTTaGCAGAGAATCTTCCTGCCAGGTTTCCATTGCTCC +
Preference number: 6 (lower is better)
Translates to: EFIKVVYKEIIC*QRIFLPGFHCS
Trigger: GGAGCAATGGAAACCTGGCAGGAAGATTCTCTGGCAACAGATGATTTCCTTGTAGACTACTTTAATGAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517828.5
CDS GCA 72 bp CTTCATGGGGATCCAGTAAGAATTAGCAGATACATGTaGCCTTTCTCAATCACATCATCCTTAGAAGAACCT +
Preference number: 6 (lower is better)
Translates to: LHGDPVRISRYM*PFSITSSLEEP
Trigger: AGGTTCTTCTAAGGATGATGTGATTGAGAAAGGGCACATGTATCTGCTAATTCTTACTGGATCCCCATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524182.1
CDS CCA 72 bp ATAAGCAATTTGGTCCGATTTTACCATCTTTGTCCATaGCTCAAGAAGGAGGAGAAGGATATATTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: ISNLVRFYHLCP*LKKEEKDIFLC
Trigger: GCAGAGGAATATATCCTTCTCCTCCTTCTTGAGCCATGGACAAAGATGGTAAAATCGGACCAAATTGCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000517828.5
ENST00000519421.1
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CCA 72 bp TATGGTCCTAACTCCTTCCGGTGTTCAATAATCTTCTaGGCTTGCTCTACTGGAATGTCAATTTGTAAAGCT +
Preference number: 6 (lower is better)
Translates to: YGPNSFRCSIIF*ACSTGMSICKA
Trigger: AGCTTTACAAATTGACATTCCAGTAGAGCAAGCCCAGAAGATTATTGAACACCGGAAGGAGTTAGGACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 90 bp ATCCAGGGAGAAAAATTTGATCCTACTGTGAAATTCATGCCGGACTaGCTCCATCTTACTTGTGAGACCAATTTGGCTAACCTGTATTCA +
Preference number: 6 (lower is better)
Translates to: IQGEKFDPTVKFMPD*LHLTCETNLANLYS
Trigger: TGAATACAGGTTAGCCAAATTGGTCTCACAAGTAAGATGGAGCAAGTCCGGCATGAATTTCACAGTAGGATCAAATTTTTCTCCCTGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360863.11
ENST00000519092.5
ENST00000519408.5
ENST00000519725.5
ENST00000520117.5
ENST00000520923.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 90 bp CTTTCATCTGTACCTTTATCTTCTGACGTGCTGCAAACTGTTCACTaGCAAGAAACAATGGCAGCCATACATTTTCTAGCCTATTTTGCA +
Preference number: 6 (lower is better)
Translates to: LSSVPLSSDVLQTVH*QETMAAIHFLAYFA
Trigger: TGCAAAATAGGCTAGAAAATGTATGGCTGCCATTGTTTCTTGCAAGTGAACAGTTTGCAGCACGTCAGAAGATAAAGGTACAGATGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 72 bp GACATTAATGGTCTCATCTTCATCGGGGGCATTCATTaGAACAGGTTTAACCTCATTCTTTCCTTTCCTTAC +
Preference number: 6 (lower is better)
Translates to: DINGLIFIGGIH*NRFNLILSFPY
Trigger: GTAAGGAAAGGAAAGAATGAGGTTAAACCTGTTCAAATGAATGCCCCCGATGAAGATGAGACCATTAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360863.11
ENST00000519092.5
ENST00000519408.5
ENST00000519725.5
ENST00000520923.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 72 bp GAAAAATTTGATCCTACTGTGAAATTCATGCCGGACTaGCTCCATCTTACTTGTGAGACCAATTTGGCTAAC +
Preference number: 6 (lower is better)
Translates to: EKFDPTVKFMPD*LHLTCETNLAN
Trigger: GTTAGCCAAATTGGTCTCACAAGTAAGATGGAGCAAGTCCGGCATGAATTTCACAGTAGGATCAAATTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360863.11
ENST00000519092.5
ENST00000519408.5
ENST00000519725.5
ENST00000520117.5
ENST00000520923.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 72 bp GTTTGTTGTAGGGTACACAACAGGGTAACGAAAAGGTaGATACTGTTTGCTGACTTTGTTTTGCTAATGCAA +
Preference number: 6 (lower is better)
Translates to: VCCRVHNRVTKR*ILFADFVLLMQ
Trigger: TTGCATTAGCAAAACAAAGTCAGCAAACAGTATCAACCTTTTCGTTACCCTGTTGTGTACCCTACAACAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360863.11
ENST00000519725.5
ENST00000520923.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 72 bp CCTTTTTATAAGCAATTTGGTCCGATTTTACCATCTTaGTCCATGGCTCAAGAAGGAGGAGAAGGATATATT +
Preference number: 6 (lower is better)
Translates to: PFYKQFGPILPS*SMAQEGGEGYI
Trigger: AATATATCCTTCTCCTCCTTCTTGAGCCATGGACAAAGATGGTAAAATCGGACCAAATTGCTTATAAAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000360863.11
ENST00000517769.5
ENST00000517828.5
ENST00000519421.1
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 72 bp GTGCTTCACATTGAACCAATATTATTTACTACGTACTaGCGCTTGCTTGCATACTTTAAAAGGCTGAAGTGT +
Preference number: 6 (lower is better)
Translates to: VLHIEPILFTTY*RLLAYFKRLKC
Trigger: ACACTTCAGCCTTTTAAAGTATGCAAGCAAGCGCAAGTACGTAGTAAATAATATTGGTTCAATGTGAAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518474.1
ENST00000520923.5
CDS CAA 90 bp ATTGTAGTTGACATTAATGGTCTCATCTTCATCGGGGGCATTCATTaGAACAGGTTTAACCTCATTCTTTCCTTTCCTTACAACATCATA +
Preference number: 6 (lower is better)
Translates to: IVVDINGLIFIGGIH*NRFNLILSFPYNII
Trigger: TATGATGTTGTAAGGAAAGGAAAGAATGAGGTTAAACCTGTTCAAATGAATGCCCCCGATGAAGATGAGACCATTAATGTCAACTACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360863.11
ENST00000519092.5
ENST00000519408.5
ENST00000519725.5
ENST00000520923.5
ENST00000523287.5
ENST00000523437.5
ENST00000617334.1
CDS CAA 90 bp TTAGTGCTTCACATTGAACCAATATTATTTACTACGTACTTGCGCTaGCTTGCATACTTTAAAAGGCTGAAGTGTTTCTTGGTAGAAAAG +
Preference number: 6 (lower is better)
Translates to: LVLHIEPILFTTYLR*LAYFKRLKCFLVEK
Trigger: CTTTTCTACCAAGAAACACTTCAGCCTTTTAAAGTATGCAAGCAAGCGCAAGTACGTAGTAAATAATATTGGTTCAATGTGAAGCACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518474.1
ENST00000520923.5
CDS CAA 72 bp CACATTGAACCAATATTATTTACTACGTACTTGCGCTaGCTTGCATACTTTAAAAGGCTGAAGTGTTTCTTG +
Preference number: 6 (lower is better)
Translates to: HIEPILFTTYLR*LAYFKRLKCFL
Trigger: CAAGAAACACTTCAGCCTTTTAAAGTATGCAAGCAAGCGCAAGTACGTAGTAAATAATATTGGTTCAATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518474.1
ENST00000520923.5
CDS CCA 72 bp AACAATATTTTGCTGATTTCAAATACAGTAATCCCATaGCAACAATTTAATTGCTGCCTTTTTGCCTGCGAT +
Preference number: 6 (lower is better)
Translates to: NNILLISNTVIP*QQFNCCLFACD
Trigger: ATCGCAGGCAAAAAGGCAGCAATTAAATTGTTGCCATGGGATTACTGTATTTGAAATCAGCAAAATATTGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518474.1
ENST00000520923.5