Pregenerated sensors for RGS10 (Homo sapiens)
Ensembl gene IDs: ENSG00000148908Ensembl transcript IDs: ENST00000369101.7, ENST00000369103.3, ENST00000392865.5, ENST00000469575.1, ENST00000473563.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCTaGGAGGAAATTCCTTTGCTTCTTAAAGCTGCCAGTCCCGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: SVLTNNKAMINPARS*EEIPLLLKAASPGF Trigger: AAAGCCGGGACTGGCAGCTTTAAGAAGCAAAGGAATTTCCTCTCAGGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| 3UTR TCA 72 bp | ACAAATAACAAAGCAATGATAAACCCGGCACGGTCCTaGGAGGAAATTCCTTTGCTTCTTAAAGCTGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: TNNKAMINPARS*EEIPLLLKAAS Trigger: ACTGGCAGCTTTAAGAAGCAAAGGAATTTCCTCTCAGGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| 3UTR-3UTR CAA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAAAAAACACACATCCCATaGAAGGGTTTTGTACATTTC | + |
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Preference number: 3 (lower is better) Translates to: TKCSTCPVLKESLFCKLKKTHIP*KGFVHF Trigger: GAAATGTACAAAACCCTTCAATGGGATGTGTGTTTT...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 37% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR TCA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAAGGCTCACGGCGCGGTTaGACATCGCCGCGGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: TKCSTCPVLKESLFCKLKGSRRG*TSPRAP Trigger: GGGCGCCCGCGGCGATGTTCAACCGCGCCGTGAGCC...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369103.3 |
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| CDS-3UTR GCA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAAACGGCGGCCGCTTCCTaGTCAGCCGGCTCACGGCGC | + |
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Preference number: 4 (lower is better) Translates to: TKCSTCPVLKESLFCKLKTAAAS*SAGSRR Trigger: GCGCCGTGAGCCGGCTGAGCAGGAAGCGGCCGCCGT...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000369103.3 |
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| CDS-3UTR CCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCCTGCCATCGCTGTCGTaGATGTCTGACGGCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSLPSLS*MSDGGR Trigger: GCGGCCGCCGTCAGACATCCACGACAGCGATGGCAG...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369103.3 |
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| CDS-3UTR TCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCCCAGGATCTTCTCGTTaGGCCGAGACTGCCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSPGSSR*AETAPP Trigger: TGGAGGGGCAGTCTCGGCTCAACGAGAAGATCCTGG...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR GCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCGGCTCTGGTGGCTGCTaGTGGAACTGCCATCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSGSGGC*WNCHRC Trigger: ACAGCGATGGCAGTTCCAGCAGCAGCCACCAGAGCC...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR GCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCGGCTGCTGCTGGAACTaGCATCGCTGTCGTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSGCCWN*HRCRGC Trigger: ACATCCACGACAGCGATGGCAGTTCCAGCAGCAGCC...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR GCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCTCGTTGAGCCGAGACTaGCCCTCCACGTTGACCTGT | + |
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Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSSLSRD*PSTLTC Trigger: ACAGGTCAACGTGGAGGGGCAGTCTCGGCTCAACGA...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCTCTGGTGGCTGCTGCTaGAACTGCCATCGCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSSGGCC*NCHRCR Trigger: ACGACAGCGATGGCAGTTCCAGCAGCAGCCACCAGA...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR TCA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACCAGGATCTTCTCGTTaGGCCGAGACTGCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVLYISVLTNNKAMINPAPGSSR*AETAPP Trigger: TGGAGGGGCAGTCTCGGCTCAACGAGAAGATCCTGG...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR TCA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAACCAGGATCTTCTCGTTaGGCCGAGACTGCCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TKCSTCPVLKESLFCKLKPGSSR*AETAPP Trigger: TGGAGGGGCAGTCTCGGCTCAACGAGAAGATCCTGG...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR TCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCAACCCGGCACGGTCCTaGGAGGAAATTCCTTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSNPARS*EEIPLL Trigger: AAGCAAAGGAATTTCCTCTCAGGACCGTGCCGGGTT...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR GCA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAAGGCTGCTGCTGGAACTaGCATCGCTGTCGTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TKCSTCPVLKESLFCKLKGCCWN*HRCRGC Trigger: ACATCCACGACAGCGATGGCAGTTCCAGCAGCAGCC...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR GCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCCGTGGATGTGTTCCATaGTCTGGTGTCCACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSRGCVP*SGVHLR Trigger: TCTCAGGTGGACACCAGAGCATGGAACACATCCACG...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392865.5 |
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| CDS-3UTR CCA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCATCTGGTGGCTGCTGCTaGAACTGCCATCGCTGTCGT | + |
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Preference number: 4 (lower is better) Translates to: RVLYISVLTNNKAMINPASGGCC*NCHRCR Trigger: ACGACAGCGATGGCAGTTCCAGCAGCAGCCACCAGA...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCCTGCCATCGCTGTCGTaGATGTCTGCAAAGCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSLPSLS*MSAKQS Trigger: ACTTTGCTTTGCAGACATCCACGACAGCGATGGCAG...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369101.7 |
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| CDS-3UTR CCA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAACTGCCATCGCTGTCGTaGATGTGTTCCATGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TKCSTCPVLKESLFCKLKLPSLS*MCSMLW Trigger: CCAGAGCATGGAACACATCCACGACAGCGATGGCAG...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000392865.5 |
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| CDS-3UTR TCA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAAAACCCGGCACGGTCCTaGGAGGAAATTCCTTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TKCSTCPVLKESLFCKLKNPARS*EEIPLL Trigger: AAGCAAAGGAATTTCCTCTCAGGACCGTGCCGGGTT...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR GCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCGCTGTCGTGGATGTCTaGAAAGCAAAGTTCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSAVVDV*KAKFRL Trigger: CAGTCTGAACTTTGCTTTGCAGACATCCACGACAGC...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369101.7 |
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| CDS-3UTR GCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCGCCTTTTCCTGCATCTaGGTCTTATCTTGCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSAFSCI*VLSCIF Trigger: GAAAATGCAAGATAAGACGCAGATGCAGGAAAAGGC...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CCA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCAATGTGTTCCATGCTCTaGTGTCCACCTGAGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: RVLYISVLTNNKAMINPAMCSML*CPPEKF Trigger: GAACTTCTCAGGTGGACACCAGAGCATGGAACACAT...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392865.5 |
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| CDS-3UTR TCA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGACGTGTCCAGTGTTaGAGGAATCTCTGTTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: RVLYISVLTNNKAMINPARRVQC*RNLCFV Trigger: TACAAAACAGAGATTCCTTCAACACTGGACACGTCG...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR TCA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAACGACGTGTCCAGTGTTaGAGGAATCTCTGTTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: TKCSTCPVLKESLFCKLKRRVQC*RNLCFV Trigger: TACAAAACAGAGATTCCTTCAACACTGGACACGTCG...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CCA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCATGAGATTAAAGATCTaGTCCTGGAGTTTCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LYISVLTNNKAMINPARSMRLKI*SWSFWN Trigger: GTTCCAGAAACTCCAGGACCAGATCTTTAATCTCAT...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR GCA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCAAAGCAAAGTTCAGACTaGATATGTGGCCAACAGACA | + |
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Preference number: 4 (lower is better) Translates to: RVLYISVLTNNKAMINPAKQSSD*ICGQQT Trigger: TGTCTGTTGGCCACATATGCAGTCTGAACTTTGCTT...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369101.7 |
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| CDS-3UTR GCA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCAGCCTTTTCCTGCATCTaGGTCTTATCTTGCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: RVLYISVLTNNKAMINPAAFSCI*VLSCIF Trigger: GAAAATGCAAGATAAGACGCAGATGCAGGAAAAGGC...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR TCA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACCTTGTGGCCTTACATaGGGTTTAATTAAGCTACAA | + |
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Preference number: 4 (lower is better) Translates to: RVLYISVLTNNKAMINPAPCGLT*GLIKLQ Trigger: TTGTAGCTTAATTAAACCTCATGTAAGGCCACAAGG...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369103.3 |
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| CDS-3UTR CCA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAAATGAGATTAAAGATCTaGTCCTGGAGTTTCTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: TKCSTCPVLKESLFCKLKMRLKI*SWSFWN Trigger: GTTCCAGAAACTCCAGGACCAGATCTTTAATCTCAT...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR TCA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCAAAACACACATCCCATTaGAGGGTTTTGTACATTTCA | + |
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Preference number: 4 (lower is better) Translates to: RVLYISVLTNNKAMINPAKHTSH*RVLYIS Trigger: TGAAATGTACAAAACCCTTCAATGGGATGTGTGTTT...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR TCA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAAAAACACACATCCCATTaGAGGGTTTTGTACATTTCA | + |
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Preference number: 4 (lower is better) Translates to: TKCSTCPVLKESLFCKLKKHTSH*RVLYIS Trigger: TGAAATGTACAAAACCCTTCAATGGGATGTGTGTTT...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 37% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS TCA 90 bp | ACTGCCATCGCTGTCGTGGATGTGTTCCATGCTCTGGTGTCCACCTaGGAAGTTCCACGCAGACCAACAATCCACTGCCTTCCCAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: TAIAVVDVFHALVST*EVPRRPTIHCLPRD Trigger: GTCTCTGGGAAGGCAGTGGATTGTTGGTCTGCGTGGAACTTCTCAGGTGGACACCAGAGCATGGAACACATCCACGACAGCGATGGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392865.5 |
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| CDS-3UTR CAA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAACGGCTCACGGCGCGGTaGAACATCGCCGCGGGCGCC | + |
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Preference number: 5 (lower is better) Translates to: TKCSTCPVLKESLFCKLKRLTAR*NIAAGA Trigger: GGCGCCCGCGGCGATGTTCAACCGCGCCGTGAGCCG...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369103.3 |
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| CDS-3UTR CAA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCTCCAGGATCTTCTCGTaGAGCCGAGACTGCCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LYISVLTNNKAMINPARSSRIFS*SRDCPS Trigger: GGAGGGGCAGTCTCGGCTCAACGAGAAGATCCTGGA...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS CCA 90 bp | GTACTTCATGAGATTAAAGATCTCGGTCTGCCCGGCCGTATGAGATaGTTTCCAGGGAGTCTAACATCGGGTGTTTCAGTAAATTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: VLHEIKDLGLPGRMR*FPGSLTSGVSVNSS Trigger: GGAAGAATTTACTGAAACACCCGATGTTAGACTCCCTGGAAACCATCTCATACGGCCGGGCAGACCGAGATCTTTAATCTCATGAAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469575.1 |
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| CDS-3UTR CAA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCAGACTGCCCCTCCACGTaGACCTGTGATGAGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: RVLYISVLTNNKAMINPADCPST*TCDEAL Trigger: CAAGGCCTCATCACAGGTCAACGTGGAGGGGCAGTC...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CAA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAAGACTGCCCCTCCACGTaGACCTGTGATGAGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: TKCSTCPVLKESLFCKLKDCPST*TCDEAL Trigger: CAAGGCCTCATCACAGGTCAACGTGGAGGGGCAGTC...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CAA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCTCTTTTAGCTGCAGTTaGAGCATCAGGCAAATCTTC | + |
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Preference number: 5 (lower is better) Translates to: LYISVLTNNKAMINPARSSFSCS*SIRQIF Trigger: GAAGATTTGCCTGATGCTCAAACTGCAGCTAAAAGA...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CAA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCTCTTCCTCGGTTCGCTaGTGTTTTAAAAACAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: LYISVLTNNKAMINPARSSSSVR*CFKNKS Trigger: TGACTTGTTTTTAAAACACAAGCGAACCGAGGAAGA...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CAA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCATCTTTTAGCTGCAGTTaGAGCATCAGGCAAATCTTC | + |
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Preference number: 5 (lower is better) Translates to: RVLYISVLTNNKAMINPASFSCS*SIRQIF Trigger: GAAGATTTGCCTGATGCTCAAACTGCAGCTAAAAGA...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CAA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAATCTTTTAGCTGCAGTTaGAGCATCAGGCAAATCTTC | + |
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Preference number: 5 (lower is better) Translates to: TKCSTCPVLKESLFCKLKSFSCS*SIRQIF Trigger: GAAGATTTGCCTGATGCTCAAACTGCAGCTAAAAGA...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CAA 90 bp | TTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCACGGTCCAAAACACACATCCCATaGAAGGGTTTTGTACATTTC | + |
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Preference number: 5 (lower is better) Translates to: LYISVLTNNKAMINPARSKTHIP*KGFVHF Trigger: GAAATGTACAAAACCCTTCAATGGGATGTGTGTTTT...GGACCGTGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CAA 90 bp | ACAAAATGCTCGACGTGTCCAGTGTTGAAGGAATCTCTGTTTTGTAAACTAAAATCTTCCTCGGTTCGCTaGTGTTTTAAAAACAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: TKCSTCPVLKESLFCKLKSSSVR*CFKNKS Trigger: TGACTTGTTTTTAAAACACAAGCGAACCGAGGAAGA...TTTTAGTTTACAAAACAGAGATTCCTTCAACACTGGACACGTCGAGCATTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENST00000369103.3 ENST00000392865.5 |
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| CDS-3UTR CAA 90 bp | AGGGTTTTGTACATTTCAGTCCTTACAAATAACAAAGCAATGATAAACCCGGCAAAAACACACATCCCATaGAAGGGTTTTGTACATTTC | + |
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Preference number: 5 (lower is better) Translates to: RVLYISVLTNNKAMINPAKTHIP*KGFVHF Trigger: GAAATGTACAAAACCCTTCAATGGGATGTGTGTTTT...TGCCGGGTTTATCATTGCTTTGTTATTTGTAAGGACTGAAATGTACAAAACCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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| CDS TCA 72 bp | GCGGCCGCTTCCTGCTCAGCCGGCTCACGGCGCGGTTaGACATCGCCGCGGGCGCCCGAGGAGGAAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: AAASCSAGSRRG*TSPRAPEEEEG Trigger: TCCTTCTTCCTCCTCGGGCGCCCGCGGCGATGTTCAACCGCGCCGTGAGCCGGCTGAGCAGGAAGCGGCCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369103.3 |
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| CDS TCA 72 bp | AGGACACAGAGGTCAGGAGAGGTGGCATGGCTTATCTaGGAGCTTCCGGGAGCCTTAGGACTGTTTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RTQRSGEVAWLI*ELPGALGLFGS Trigger: GGAGCCAAACAGTCCTAAGGCTCCCGGAAGCTCTCAGATAAGCCATGCCACCTCTCCTGACCTCTGTGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473563.1 |
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| CDS CAA 72 bp | AGGATCTTCTCGTTGAGCCGAGACTGCCCCTCCACGTaGACCTGTGATGAGGCCTTGCTGGACAGAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RIFSLSRDCPST*TCDEALLDRKV Trigger: GACCTTTCTGTCCAGCAAGGCCTCATCACAGGTCAACGTGGAGGGGCAGTCTCGGCTCAACGAGAAGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 ENST00000473563.1 |
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| CDS CCA 72 bp | GCATCTGCTTGGAGGGATCCCATTTCCTTAATCCCCTaGACATGCAGCAAAGGGCATTTTCCTGTTAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: ASAWRDPISLIP*TCSKGHFPVSP Trigger: GGGGCTAACAGGAAAATGCCCTTTGCTGCATGTCCAGGGGATTAAGGAAATGGGATCCCTCCAAGCAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473563.1 |
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| CDS CCA 72 bp | GAGATTAAAGATCTCGGTCTGCCCGGCCGTATGAGATaGTTTCCAGGGAGTCTAACATCGGGTGTTTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: EIKDLGLPGRMR*FPGSLTSGVSV Trigger: TACTGAAACACCCGATGTTAGACTCCCTGGAAACCATCTCATACGGCCGGGCAGACCGAGATCTTTAATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469575.1 |
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| CDS CAA 90 bp | GGGGGCTCATGTGTTATAAATTCTGGAAGCTCTTTTAGCTGCAGTTaGAGCATCAGGCAAATCTTCTTCCTCTTCCTCGGTTCGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GGSCVINSGSSFSCS*SIRQIFFLFLGSLV Trigger: CACAAGCGAACCGAGGAAGAGGAAGAAGATTTGCCTGATGCTCAAACTGCAGCTAAAAGAGCTTCCAGAATTTATAACACATGAGCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 ENST00000469575.1 |
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| CDS CCA 72 bp | TTCCTTTGCTTCTTAAAGCTGCCAGTCCCGGCTTTTTaGGGGCTCATGTGTTATAAATTCTGGAAGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: FLCFLKLPVPAF*GLMCYKFWKLF Trigger: AAAGAGCTTCCAGAATTTATAACACATGAGCCCCCAAAAAGCCGGGACTGGCAGCTTTAAGAAGCAAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000369101.7 ENST00000369103.3 ENST00000392865.5 |
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