Pregenerated sensors for RFXAP (Homo sapiens)
Ensembl gene IDs: ENSG00000133111Ensembl transcript IDs: ENST00000255476.3, ENST00000472888.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTAACATCAAAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTaGTTAGTTAATCCGTCAGGTTTTACTAACACACCTCTGAAAAGA | + |
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Preference number: 1 (lower is better) Translates to: VTSKREANCRRHIPV*LVNPSGFTNTPLKR Trigger: TCTTTTCAGAGGTGTGTTAGTAAAACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTTTGATGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAATGTGGGACTACCCCTaGCACTGCAGAACATTTAGC | + |
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Preference number: 2 (lower is better) Translates to: KREANCRRHIPVCLVNPSMWDYP*HCRTFS Trigger: GCTAAATGTTCTGCAGTGTCAGGGGTAGTCCCACAT...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| 3UTR CAA 90 bp | ATGTTAGCACCACAAAATAGCCATCAACATTTCTTAGGAGTGTTATaGGCACTGCGGGTGAGACAATCTTTAGTATGTGGGACTACCCCT | + |
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Preference number: 2 (lower is better) Translates to: MLAPQNSHQHFLGVL*ALRVRQSLVCGTTP Trigger: AGGGGTAGTCCCACATACTAAAGATTGTCTCACCCGCAGTGCCAATAACACTCCTAAGAAATGTTGATGGCTATTTTGTGGTGCTAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCATTTGGAAAGATAAGCTaGCTTCTTCAAACTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: KREANCRRHIPVCLVNPSFGKIS*LLQTHS Trigger: ACTGTGAGTTTGAAGAAGTCAGCTTATCTTTCCAAA...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTTTACTTATCCCCAAATaGACACATACATTTACAGGA | + |
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Preference number: 2 (lower is better) Translates to: REANCRRHIPVCLVNPSGLLIPK*THTFTG Trigger: TCCTGTAAATGTATGTGTGCATTTGGGGATAAGTAA...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| 3UTR GCA 72 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTaGTTAGTTAATCCGTCAGGTTTTACTAACACACCT | + |
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Preference number: 3 (lower is better) Translates to: KREANCRRHIPV*LVNPSGFTNTP Trigger: AGGTGTGTTAGTAAAACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| 3UTR-3UTR CAA 90 bp | CCATCAACATTTCTTAGGAGTGTTATTGGCACTGCGGGTGAGACAATCTTTAGTACTATGACAATCAAATaGACCCTTGATGAGAACCAC | + |
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Preference number: 3 (lower is better) Translates to: PSTFLRSVIGTAGETIFSTMTIK*TLDENH Trigger: GTGGTTCTCATCAAGGGTCAATTTGATTGTCATAGT...ACTAAAGATTGTCTCACCCGCAGTGCCAATAACACTCCTAAGAAATGTTGATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTAGGCTGGCGCCAAGGTaGGAGCCGCAGCCGGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGRLAPR*EPQPGL Trigger: TAGCCCCGGCTGCGGCTCCCACCTTGGCGCCAGCCT...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR TCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAACTAGCAGGGTGAATTaGGAGGCCGCGGCCGCCACC | + |
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Preference number: 4 (lower is better) Translates to: KREANCRRHIPVCLVNPSTSRVN*EAAAAT Trigger: GGTGGCGGCCGCGGCCTCTCAATTCACCCTGCTAGT...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR TCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGCATCACTAGCAGGGTaGATTGAGAGGCCGCGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KREANCRRHIPVCLVNPSASLAG*IERPRP Trigger: CGGCCGCGGCCTCTCAATTCACCCTGCTAGTGATGC...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTATCCACGGTTTGCGCTaGTTGGCCACCTGGCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGIHGLR*LATWLV Trigger: CACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGAT...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCATGGCCACCTGGCTCGTaGTCTCGCTGCAGCCTTCGT | + |
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Preference number: 4 (lower is better) Translates to: KREANCRRHIPVCLVNPSWPPGS*SRCSLR Trigger: ACGAAGGCTGCAGCGAGACCACGAGCCAGGTGGCCA...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCACCCTCCGCTACACCCTaGGCCTCCATGCTGCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: KREANCRRHIPVCLVNPSPSATP*ASMLLR Trigger: TCTTAGCAGCATGGAGGCGCAGGGTGTAGCGGAGGG...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCATGCACATCCACGGTTTaGGCTGCTTGGCCACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KREANCRRHIPVCLVNPSCTSTV*AAWPPG Trigger: GCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCA...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | CCATCAACATTTCTTAGGAGTGTTATTGGCACTGCGGGTGAGACAATCTTTAGTCGCTGCTTGGCCACCTaGCTCGTGGTCTCGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PSTFLRSVIGTAGETIFSRCLAT*LVVSLQ Trigger: CTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCG...ACTAAAGATTGTCTCACCCGCAGTGCCAATAACACTCCTAAGAAATGTTGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAACGGTTTGCGCTGCTTaGCCACCTGGCTCGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: KREANCRRHIPVCLVNPSTVCAA*PPGSWS Trigger: AGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGT...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR TCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCACACTTTCCTCGAGTTTaGCGTTTCCCGCGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KREANCRRHIPVCLVNPSHFPRV*RFPRCQ Trigger: CTGGCAGCGCGGGAAACGTCAAACTCGAGGAAAGTG...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | CTTCCACAGAAAGTAACTGCTTCATTACCTTCAGTAACAATGACTGAAGAGGAAAGGTCTTGCTCATGCTaGCCCCACCGCTGCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LPQKVTASLPSVTMTEEERSCSC*PHRCPA Trigger: GGCGGGGCAGCGGTGGGGGCAGCATGAGCAAGACCT...TTCCTCTTCAGTCATTGTTACTGAAGGTAATGAAGCAGTTACTTTCTGTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTTGCAGCCTTCGTAGGTaGAGGTCTTGCTCATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGCSLRR*RSCSCC Trigger: GCAGCATGAGCAAGACCTGCACCTACGAAGGCTGCA...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | CCATCAACATTTCTTAGGAGTGTTATTGGCACTGCGGGTGAGACAATCTTTAGTGGCTCGTGGTCTCGCTaGAGCCTTCGTAGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PSTFLRSVIGTAGETIFSGSWSR*SLRRCR Trigger: CCTGCACCTACGAAGGCTGCAGCGAGACCACGAGCC...ACTAAAGATTGTCTCACCCGCAGTGCCAATAACACTCCTAAGAAATGTTGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTTGCCCAGCACAGGGTTaGATCACTAGCAGGGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGCPAQG*ITSRVN Trigger: ATTCACCCTGCTAGTGATGCAACCCTGTGCTGGGCA...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTAGACTCAGGACACGCTaGGGTAAAAGGCGCCTATAC | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGRLRTR*GKRRLY Trigger: GTATAGGCGCCTTTTACCCCAGCGTGTCCTGAGTCT...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | CTTCCACAGAAAGTAACTGCTTCATTACCTTCAGTAACAATGACTGAAGAGGAACGTAGGTGCAGGTCTTaGTCATGCTGCCCCCACCGC | + |
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Preference number: 4 (lower is better) Translates to: LPQKVTASLPSVTMTEEERRCRS*SCCPHR Trigger: GCGGTGGGGGCAGCATGAGCAAGACCTGCACCTACG...TTCCTCTTCAGTCATTGTTACTGAAGGTAATGAAGCAGTTACTTTCTGTGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTTGTTGCGGTGTTTCTTaGACATCCACGGTTTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGCCGVS*TSTVCA Trigger: AGCGCAAACCGTGGATGTGCAAGAAACACCGCAACA...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTCCGCAGTTCAGGGCCTaGTCGCTCTTCTTCTTTTTA | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGPQFRA*SLFFFL Trigger: TAAAAAGAAGAAGAGCGACCAGGCCCTGAACTGCGG...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | AAGATTAGATGCACAAAGTGCAATACTTACTTATCCCCAAATGCACACATACATGCCGCAGCCTCGTCCTaGCCAGCACAGGGTTGCATC | + |
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Preference number: 4 (lower is better) Translates to: KIRCTKCNTYLSPNAHIHAAASS*PAQGCI Trigger: GATGCAACCCTGTGCTGGGCAGGACGAGGCTGCGGC...ATGTATGTGTGCATTTGGGGATAAGTAAGTATTGCACTTTGTGCATCTAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | AAGATTAGATGCACAAAGTGCAATACTTACTTATCCCCAAATGCACACATACATCATGCTGCTAAGACCTaGCCGGGGTCCACGACCCCG | + |
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Preference number: 4 (lower is better) Translates to: KIRCTKCNTYLSPNAHIHHAAKT*PGSTTP Trigger: CGGGGTCGTGGACCCCGGCCAGGTCTTAGCAGCATG...ATGTATGTGTGCATTTGGGGATAAGTAAGTATTGCACTTTGTGCATCTAATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR TCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTTTGGCATTGGTGGGCTaGGATCTATACTGTTCACAA | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGLALVG*DLYCSQ Trigger: TTGTGAACAGTATAGATCTCAGCCCACCAATGCCAA...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTAGACACATCCCAGTGTaGTTAGTTAATCCGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGRHIPV*LVNPSG Trigger: ACCTGACGGATTAACTAAGCACACTGGGATGTGTCT...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR TCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTTTACTAACACACCTCTaGAAAGAGATGCACATCCTA | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGLLTHL*KEMHIL Trigger: TAGGATGTGCATCTCTTTTCAGAGGTGTGTTAGTAA...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCATTGTCTTGGCATTGGTaGGCTGAGATCTATACTGTT | + |
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Preference number: 4 (lower is better) Translates to: KREANCRRHIPVCLVNPSLSWHW*AEIYTV Trigger: AACAGTATAGATCTCAGCCCACCAATGCCAAGACAA...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR TCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTTTTGGAAAGATAAGCTaGCTTCTTCAAACTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGFGKIS*LLQTHS Trigger: ACTGTGAGTTTGAAGAAGTCAGCTTATCTTTCCAAA...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR TCA 90 bp | CTTCCACAGAAAGTAACTGCTTCATTACCTTCAGTAACAATGACTGAAGAGGAAATGTGGGACTACCCCTaGCACTGCAGAACATTTAGC | + |
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Preference number: 4 (lower is better) Translates to: LPQKVTASLPSVTMTEEEMWDYP*HCRTFS Trigger: GCTAAATGTTCTGCAGTGTCAGGGGTAGTCCCACAT...TTCCTCTTCAGTCATTGTTACTGAAGGTAATGAAGCAGTTACTTTCTGTGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTAAAATAATTTTGTCTTaGCATTGGTGGGCTGAGATC | + |
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Preference number: 4 (lower is better) Translates to: REANCRRHIPVCLVNPSGKIILS*HWWAEI Trigger: GATCTCAGCCCACCAATGCCAAGACAAAATTATTTT...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| 3UTR CAA 72 bp | CCACAAAATAGCCATCAACATTTCTTAGGAGTGTTATaGGCACTGCGGGTGAGACAATCTTTAGTATGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PQNSHQHFLGVL*ALRVRQSLVCG Trigger: CCCACATACTAAAGATTGTCTCACCCGCAGTGCCAATAACACTCCTAAGAAATGTTGATGGCTATTTTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | CCATCAACATTTCTTAGGAGTGTTATTGGCACTGCGGGTGAGACAATCTTTAGTGGAGAGTATGTTATCTaGACTTTCCTCGAGTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: PSTFLRSVIGTAGETIFSGEYVI*TFLEFD Trigger: GTCAAACTCGAGGAAAGTGCAGATAACATACTCTCC...ACTAAAGATTGTCTCACCCGCAGTGCCAATAACACTCCTAAGAAATGTTGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | CCATCAACATTTCTTAGGAGTGTTATTGGCACTGCGGGTGAGACAATCTTTAGTGAACCCAATTATAGGTaGCCCAACTACATGTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSTFLRSVIGTAGETIFSEPNYR*PNYMLA Trigger: TGCTAACATGTAGTTGGGGCACCTATAATTGGGTTC...ACTAAAGATTGTCTCACCCGCAGTGCCAATAACACTCCTAAGAAATGTTGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | AAGATTAGATGCACAAAGTGCAATACTTACTTATCCCCAAATGCACACATACATCTTTTAGCACCTGCTTaGCCTAACGGCACTTCGCGA | + |
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Preference number: 4 (lower is better) Translates to: KIRCTKCNTYLSPNAHIHLLAPA*PNGTSR Trigger: TCGCGAAGTGCCGTTAGGCCAAGCAGGTGCTAAAAG...ATGTATGTGTGCATTTGGGGATAAGTAAGTATTGCACTTTGTGCATCTAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | CTTCCACAGAAAGTAACTGCTTCATTACCTTCAGTAACAATGACTGAAGAGGAACCTTGTACATCTTGTTaGGGTGTTTCTTGCACATCC | + |
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Preference number: 4 (lower is better) Translates to: LPQKVTASLPSVTMTEEEPCTSC*GVSCTS Trigger: GGATGTGCAAGAAACACCGCAACAAGATGTACAAGG...TTCCTCTTCAGTCATTGTTACTGAAGGTAATGAAGCAGTTACTTTCTGTGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAATTAGATGCACAAAGTaGAATACTTACTTATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: KREANCRRHIPVCLVNPSIRCTK*NTYLSP Trigger: TGGGGATAAGTAAGTATTGCACTTTGTGCATCTAAT...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CCA 90 bp | CTTCCACAGAAAGTAACTGCTTCATTACCTTCAGTAACAATGACTGAAGAGGAAATTTTGTCTTGGCATTaGTGGGCTGAGATCTATACT | + |
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Preference number: 4 (lower is better) Translates to: LPQKVTASLPSVTMTEEEILSWH*WAEIYT Trigger: AGTATAGATCTCAGCCCACCAATGCCAAGACAAAAT...TTCCTCTTCAGTCATTGTTACTGAAGGTAATGAAGCAGTTACTTTCTGTGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR GCA 90 bp | AAGATTAGATGCACAAAGTGCAATACTTACTTATCCCCAAATGCACACATACATTTACTTATCCCCAAATaGACACATACATTTACAGGA | + |
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Preference number: 4 (lower is better) Translates to: KIRCTKCNTYLSPNAHIHLLIPK*THTFTG Trigger: TCCTGTAAATGTATGTGTGCATTTGGGGATAAGTAA...ATGTATGTGTGCATTTGGGGATAAGTAAGTATTGCACTTTGTGCATCTAATCTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 90 bp | GCTGCTTGGCCACCTGGCTCGTGGTCTCGCTGCAGCCTTCGTAGGTaGAGGTCTTGCTCATGCTGCCCCCACCGCTGCCCCGCCTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: AAWPPGSWSRCSLRR*RSCSCCPHRCPASG Trigger: CCCGGAGGCGGGGCAGCGGTGGGGGCAGCATGAGCAAGACCTGCACCTACGAAGGCTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 90 bp | ACATCCACGGTTTGCGCTGCTTGGCCACCTGGCTCGTGGTCTCGCTaGAGCCTTCGTAGGTGCAGGTCTTGCTCATGCTGCCCCCACCGC | + |
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Preference number: 5 (lower is better) Translates to: TSTVCAAWPPGSWSR*SLRRCRSCSCCPHR Trigger: GCGGTGGGGGCAGCATGAGCAAGACCTGCACCTACGAAGGCTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CCA 90 bp | GTTTCTTGCACATCCACGGTTTGCGCTGCTTGGCCACCTGGCTCGTaGTCTCGCTGCAGCCTTCGTAGGTGCAGGTCTTGCTCATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: VSCTSTVCAAWPPGS*SRCSLRRCRSCSCC Trigger: GCAGCATGAGCAAGACCTGCACCTACGAAGGCTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CCA 90 bp | ACATCTTGTTGCGGTGTTTCTTGCACATCCACGGTTTGCGCTGCTTaGCCACCTGGCTCGTGGTCTCGCTGCAGCCTTCGTAGGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: TSCCGVSCTSTVCAA*PPGSWSRCSLRRCR Trigger: CCTGCACCTACGAAGGCTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 90 bp | TGTCCTTGTACATCTTGTTGCGGTGTTTCTTGCACATCCACGGTTTaGGCTGCTTGGCCACCTGGCTCGTGGTCTCGCTGCAGCCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: CPCTSCCGVSCTSTV*AAWPPGSWSRCSLR Trigger: ACGAAGGCTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CCA 90 bp | TTTCCCGCGCTGCCAGTCGAGGCAGTCCCACCGCAGTTCAGGGCCTaGTCGCTCTTCTTCTTTTTATACTTGTCCTTGTACATCTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: FPALPVEAVPPQFRA*SLFFFLYLSLYILL Trigger: CAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGAGCGACCAGGCCCTGAACTGCGGTGGGACTGCCTCGACTGGCAGCGCGGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CAA 90 bp | CTTCCACAGAAAGTAACTGCTTCATTACCTTCAGTAACAATGACTGAAGAGGAAAGGTACCTAACGGGCTaGCCCGCCCCAACGCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LPQKVTASLPSVTMTEEERYLTG*PAPTLP Trigger: GGGCAGCGTTGGGGCGGGCAAGCCCGTTAGGTACCT...TTCCTCTTCAGTCATTGTTACTGAAGGTAATGAAGCAGTTACTTTCTGTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CAA 90 bp | AGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCAGGTTTGTTGCGGTGTTTCTaGCACATCCACGGTTTGCGC | + |
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Preference number: 5 (lower is better) Translates to: REANCRRHIPVCLVNPSGLLRCF*HIHGLR Trigger: GCGCAAACCGTGGATGTGCAAGAAACACCGCAACAA...ACCTGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 90 bp | TCTTCTTTTTATACTTGTCCTTGTACATCTTGTTGCGGTGTTTCTTaGACATCCACGGTTTGCGCTGCTTGGCCACCTGGCTCGTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SSFYTCPCTSCCGVS*TSTVCAAWPPGSWS Trigger: AGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 90 bp | CCTGGTCGCTCTTCTTCTTTTTATACTTGTCCTTGTACATCTTGTTaGGGTGTTTCTTGCACATCCACGGTTTGCGCTGCTTGGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: PGRSSSFYTCPCTSC*GVSCTSTVCAAWPP Trigger: AGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGAGCGACCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CAA 90 bp | AAGATTAGATGCACAAAGTGCAATACTTACTTATCCCCAAATGCACACATACATTTGCACATCCACGGTTaGCGCTGCTTGGCCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: KIRCTKCNTYLSPNAHIHLHIHG*RCLATW Trigger: CCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAA...ATGTATGTGTGCATTTGGGGATAAGTAAGTATTGCACTTTGTGCATCTAATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CAA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCATCCTTGTACATCTTGTaGCGGTGTTTCTTGCACATC | + |
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Preference number: 5 (lower is better) Translates to: KREANCRRHIPVCLVNPSSLYIL*RCFLHI Trigger: GATGTGCAAGAAACACCGCAACAAGATGTACAAGGA...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CAA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCATTGTCCTTGTACATCTaGTTGCGGTGTTTCTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: KREANCRRHIPVCLVNPSLSLYI*LRCFLH Trigger: GTGCAAGAAACACCGCAACAAGATGTACAAGGACAA...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CAA 90 bp | AAGAGAGAAGCCAACTGTAGGAGACACATCCCAGTGTGCTTAGTTAATCCGTCATCCTGGAAACTGCTGTaGTCTTTGCTCCAAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: KREANCRRHIPVCLVNPSSWKLL*SLLQNL Trigger: CAAGTTTTGGAGCAAAGACAACAGCAGTTTCCAGGA...TGACGGATTAACTAAGCACACTGGGATGTGTCTCCTACAGTTGGCTTCTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CAA 90 bp | AAGATTAGATGCACAAAGTGCAATACTTACTTATCCCCAAATGCACACATACATGCACTTTCCTCGAGTTaGACGTTTCCCGCGCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: KIRCTKCNTYLSPNAHIHALSSS*TFPALP Trigger: TGGCAGCGCGGGAAACGTCAAACTCGAGGAAAGTGC...ATGTATGTGTGCATTTGGGGATAAGTAAGTATTGCACTTTGTGCATCTAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CAA 90 bp | AAGATTAGATGCACAAAGTGCAATACTTACTTATCCCCAAATGCACACATACATAAACTGCTGTTGTCTTaGCTCCAAAACTTGCTGATT | + |
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Preference number: 5 (lower is better) Translates to: KIRCTKCNTYLSPNAHIHKLLLS*LQNLLI Trigger: AATCAGCAAGTTTTGGAGCAAAGACAACAGCAGTTT...ATGTATGTGTGCATTTGGGGATAAGTAAGTATTGCACTTTGTGCATCTAATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS-3UTR CAA 90 bp | AAGATTAGATGCACAAAGTGCAATACTTACTTATCCCCAAATGCACACATACATTTTTTATACTTGTCCTaGTACATCTTGTTGCGGTGT | + |
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Preference number: 5 (lower is better) Translates to: KIRCTKCNTYLSPNAHIHFLYLS*YILLRC Trigger: ACACCGCAACAAGATGTACAAGGACAAGTATAAAAA...ATGTATGTGTGCATTTGGGGATAAGTAAGTATTGCACTTTGTGCATCTAATCTT 36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 72 bp | TCGTGGTCTCGCTGCAGCCTTCGTAGGTGCAGGTCTTaGTCATGCTGCCCCCACCGCTGCCCCGCCTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: SWSRCSLRRCRS*SCCPHRCPASG Trigger: CCCGGAGGCGGGGCAGCGGTGGGGGCAGCATGAGCAAGACCTGCACCTACGAAGGCTGCAGCGAGACCACGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS TCA 72 bp | CGTCCTGCCCAGCACAGGGTTGCATCACTAGCAGGGTaGATTGAGAGGCCGCGGCCGCCACCGAGGCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: RPAQHRVASLAG*IERPRPPPRLA Trigger: CGCCAGCCTCGGTGGCGGCCGCGGCCTCTCAATTCACCCTGCTAGTGATGCAACCCTGTGCTGGGCAGGACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 72 bp | GTTTGCGCTGCTTGGCCACCTGGCTCGTGGTCTCGCTaGAGCCTTCGTAGGTGCAGGTCTTGCTCATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VCAAWPPGSWSR*SLRRCRSCSCC Trigger: GCAGCATGAGCAAGACCTGCACCTACGAAGGCTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CCA 72 bp | ACATCCACGGTTTGCGCTGCTTGGCCACCTGGCTCGTaGTCTCGCTGCAGCCTTCGTAGGTGCAGGTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: TSTVCAAWPPGS*SRCSLRRCRSC Trigger: GCAAGACCTGCACCTACGAAGGCTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CCA 72 bp | TGCGGTGTTTCTTGCACATCCACGGTTTGCGCTGCTTaGCCACCTGGCTCGTGGTCTCGCTGCAGCCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: CGVSCTSTVCAA*PPGSWSRCSLR Trigger: ACGAAGGCTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 72 bp | TTGTTGCGGTGTTTCTTGCACATCCACGGTTTGCGCTaGTTGGCCACCTGGCTCGTGGTCTCGCTGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LLRCFLHIHGLR*LATWLVVSLQP Trigger: AGGCTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 72 bp | ACATCTTGTTGCGGTGTTTCTTGCACATCCACGGTTTaGGCTGCTTGGCCACCTGGCTCGTGGTCTCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TSCCGVSCTSTV*AAWPPGSWSRC Trigger: GCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 90 bp | TTGTCCTTGTACATCTTGTTGCGGTGTTTCTTGCACATCCACGGTTaGCGCTGCTTGGCCACCTGGCTCGTGGTCTCGCTGCAGCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: LSLYILLRCFLHIHG*RCLATWLVVSLQPS Trigger: CGAAGGCTGCAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 72 bp | TACATCTTGTTGCGGTGTTTCTTGCACATCCACGGTTaGCGCTGCTTGGCCACCTGGCTCGTGGTCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: YILLRCFLHIHG*RCLATWLVVSL Trigger: CAGCGAGACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CCA 72 bp | CTGCCAGTCGAGGCAGTCCCACCGCAGTTCAGGGCCTaGTCGCTCTTCTTCTTTTTATACTTGTCCTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: LPVEAVPPQFRA*SLFFFLYLSLY Trigger: GTACAAGGACAAGTATAAAAAGAAGAAGAGCGACCAGGCCCTGAACTGCGGTGGGACTGCCTCGACTGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 72 bp | TATACTTGTCCTTGTACATCTTGTTGCGGTGTTTCTTaGACATCCACGGTTTGCGCTGCTTGGCCACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: YTCPCTSCCGVS*TSTVCAAWPPG Trigger: GCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 90 bp | GCCTGGTCGCTCTTCTTCTTTTTATACTTGTCCTTGTACATCTTGTaGCGGTGTTTCTTGCACATCCACGGTTTGCGCTGCTTGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: AWSLFFFLYLSLYIL*RCFLHIHGLRCLAT Trigger: GGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGAGCGACCAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 90 bp | AGGGCCTGGTCGCTCTTCTTCTTTTTATACTTGTCCTTGTACATCTaGTTGCGGTGTTTCTTGCACATCCACGGTTTGCGCTGCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RAWSLFFFLYLSLYI*LRCFLHIHGLRCLA Trigger: GGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGAGCGACCAGGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 90 bp | CCGCAGTTCAGGGCCTGGTCGCTCTTCTTCTTTTTATACTTGTCCTaGTACATCTTGTTGCGGTGTTTCTTGCACATCCACGGTTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: PQFRAWSLFFFLYLS*YILLRCFLHIHGLR Trigger: GCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGAGCGACCAGGCCCTGAACTGCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 90 bp | GTCCCACCGCAGTTCAGGGCCTGGTCGCTCTTCTTCTTTTTATACTaGTCCTTGTACATCTTGTTGCGGTGTTTCTTGCACATCCACGGT | + |
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Preference number: 6 (lower is better) Translates to: VPPQFRAWSLFFFLY*SLYILLRCFLHIHG Trigger: ACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGAGCGACCAGGCCCTGAACTGCGGTGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 72 bp | TTATACTTGTCCTTGTACATCTTGTTGCGGTGTTTCTaGCACATCCACGGTTTGCGCTGCTTGGCCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: LYLSLYILLRCF*HIHGLRCLATW Trigger: CCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 90 bp | TTCTTCTTTTTATACTTGTCCTTGTACATCTTGTTGCGGTGTTTCTaGCACATCCACGGTTTGCGCTGCTTGGCCACCTGGCTCGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: FFFLYLSLYILLRCF*HIHGLRCLATWLVV Trigger: GACCACGAGCCAGGTGGCCAAGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 72 bp | AGGGCCTGGTCGCTCTTCTTCTTTTTATACTTGTCCTaGTACATCTTGTTGCGGTGTTTCTTGCACATCCAC | + |
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Preference number: 6 (lower is better) Translates to: RAWSLFFFLYLS*YILLRCFLHIH Trigger: GTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGAGCGACCAGGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 72 bp | CAGTTCAGGGCCTGGTCGCTCTTCTTCTTTTTATACTaGTCCTTGTACATCTTGTTGCGGTGTTTCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: QFRAWSLFFFLY*SLYILLRCFLH Trigger: GTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGAGCGACCAGGCCCTGAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 72 bp | CTCTTCTTCTTTTTATACTTGTCCTTGTACATCTTGTaGCGGTGTTTCTTGCACATCCACGGTTTGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LFFFLYLSLYIL*RCFLHIHGLRC Trigger: GCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 72 bp | TCGCTCTTCTTCTTTTTATACTTGTCCTTGTACATCTaGTTGCGGTGTTTCTTGCACATCCACGGTTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: SLFFFLYLSLYI*LRCFLHIHGLR Trigger: GCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGAGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS GCA 72 bp | TCTTCTTCTTTTTATACTTGTCCTTGTACATCTTGTTaGGGTGTTTCTTGCACATCCACGGTTTGCGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSSFYTCPCTSC*GVSCTSTVCAA Trigger: AGCAGCGCAAACCGTGGATGTGCAAGAAACACCGCAACAAGATGTACAAGGACAAGTATAAAAAGAAGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000255476.3 |
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| CDS CAA 72 bp | AGGTCTTGCAGGACGATCCCCAAAAGATCCTGTTCTTaGTTTAACAATGGAGAGTATGTTATCTGCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: RSCRTIPKRSCS*FNNGEYVICTF Trigger: GAAAGTGCAGATAACATACTCTCCATTGTTAAACAAAGAACAGGATCTTTTGGGGATCGTCCTGCAAGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000255476.3 ENST00000472888.1 |
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