RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RFX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000132005

Ensembl transcript IDs: ENST00000254325.9, ENST00000586913.1, ENST00000588520.1, ENST00000588885.1, ENST00000589239.5, ENST00000589760.1, ENST00000589937.5, ENST00000671957.1, ENST00000672295.1, ENST00000672484.1, ENST00000672811.1, ENST00000672908.1, ENST00000673115.1, ENST00000673313.1

Found 635 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTaGAGGCCGTGCCCCCTGCCGCCCTCCTCACAGCCGGGCCGGGCA +
Preference number: 1 (lower is better)
Translates to: SVGTPRLRGSLLFGS*RPCPLPPSSQPGRA
Trigger: TGCCCGGCCCGGCTGTGAGGAGGGCGGCAGGGGGCACGGCCTCCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR GCA 90 bp GGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGAGGCCGTGCCCCCTaGCGCCCTCCTCACAGCCGGGCCGGGCAGTGCCCCCTTCTTGAG +
Preference number: 1 (lower is better)
Translates to: GSAARCSLEAGGRAP*RPPHSRAGQCPLLE
Trigger: CTCAAGAAGGGGGCACTGCCCGGCCCGGCTGTGAGGAGGGCGGCAGGGGGCACGGCCTCCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR CCA 90 bp AACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGGGGTaGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGAT +
Preference number: 1 (lower is better)
Translates to: NSARAALTNRTIVMG*GSHGTEEKRGLRED
Trigger: ATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR GCA 90 bp GGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTaGAGCTGCGGCTCCGCCCAGCCCACTGATTGTGCCGGCCCCATA +
Preference number: 1 (lower is better)
Translates to: GHAAGSLRHVFCVRV*SCGSAQPTDCAGPI
Trigger: TATGGGGCCGGCACAATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR GCA 90 bp GCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTaGGGCTCCGCCCAGCCCACTGATTGTGCCGGCCCCATAAGGGAG +
Preference number: 1 (lower is better)
Translates to: AAGSLRHVFCVRVCS*GSAQPTDCAGPIRE
Trigger: CTCCCTTATGGGGCCGGCACAATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTGCCTGCCTGCCCCCTaGGGTGGTGGGAGGACGGGG +
Preference number: 2 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLCLPAP*GGGRTG
Trigger: CCCCGTCCTCCCACCACCCCAGGGGGCAGGCAGGCA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR CAA 90 bp GCCGCCCTCCTCACAGCCGGGCCGGGCAGTGCCCCCTTCTTGAGCTaGGGGGCAAGGGAGGGCCCAGCGCTGGAGAAGATGCGACACCCA +
Preference number: 2 (lower is better)
Translates to: AALLTAGPGSAPFLS*GAREGPALEKMRHP
Trigger: TGGGTGTCGCATCTTCTCCAGCGCTGGGCCCTCCCTTGCCCCCAAGCTCAAGAAGGGGGCACTGCCCGGCCCGGCTGTGAGGAGGGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTAGCTTTGAGGGACCCTaGCGTGGAGGGGTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: EGPGLPCLGVPLPALAEASFEGP*RGGVAG
Trigger: CCCCGCCACCCCTCCACGCCAGGGTCCCTCAAAGCT...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR TCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTAAGCCACAGAAGCTTTaGGGGACCCTGGCGTGGAGG +
Preference number: 2 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAKPQKL*GTLAWR
Trigger: CCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTT...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR CCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAGGGAGGGCCCAGCGCTaGAGAAGATGCGACACCCAC +
Preference number: 2 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTGRAQR*RRCDTH
Trigger: GTGGGTGTCGCATCTTCTCCAGCGCTGGGCCCTCCC...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR GCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGGAAGCTGGAGGCCGTaGCCCCTGCCGCCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: AHESHNSHGVGVARHGGEGSWRP*PLPPSS
Trigger: TGAGGAGGGCGGCAGGGGGCACGGCCTCCAGCTTCC...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR TCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGGCAGTGCCCCCTTCTTaGGCTTGGGGGCAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWAVPPS*AWGQGR
Trigger: CCTCCCTTGCCCCCAAGCTCAAGAAGGGGGCACTGC...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTAGCTTTGAGGGACCCTaGCGTGGAGGGGTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLISFEGP*RGGVAG
Trigger: CCCCGCCACCCCTCCACGCCAGGGTCCCTCAAAGCT...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR TCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTCTCCGCCCAGCCCACTaGTTGTGCCGGCCCCATAAG +
Preference number: 2 (lower is better)
Translates to: TLDYHTCGHFHHREREPRLRPAH*LCRPHK
Trigger: CTTATGGGGCCGGCACAATCAGTGGGCTGGGCGGAG...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR TCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCTCCGCCCAGCCCACTaGTTGTGCCGGCCCCATAAG +
Preference number: 2 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCLRPAH*LCRPHK
Trigger: CTTATGGGGCCGGCACAATCAGTGGGCTGGGCGGAG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR CCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGTGGGAGGACGGGGCTaGGGAGAAGACGCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: LCKASELNKLTVSHGRGPVGGRG*GEDAGA
Trigger: GGCCCCAGCGTCTTCTCCCCAGCCCCGTCCTCCCAC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGACGGCTCGCTGCTCTTTaGAAGCTGGAGGCCGTGCCC +
Preference number: 2 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGRLAAL*KLEAVP
Trigger: GGGCACGGCCTCCAGCTTCCAAAGAGCAGCGAGCCG...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR TCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCCTGAGGCTGGAGCAGTaGCCACGAAGCCACAGAAGC +
Preference number: 2 (lower is better)
Translates to: KASELNKLTVSHGRGPACLRLEQ*PRSHRS
Trigger: GCTTCTGTGGCTTCGTGGTCACTGCTCCAGCCTCAG...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR TCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATCTGAGGCTGGAGCAGTaGCCACGAAGCCACAGAAGC +
Preference number: 2 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHLRLEQ*PRSHRS
Trigger: GCTTCTGTGGCTTCGTGGTCACTGCTCCAGCCTCAG...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR GCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTTTTTGTGTCAGAGTTTaGAGCTGCGGCTCCGCCCAG +
Preference number: 2 (lower is better)
Translates to: TLDYHTCGHFHHREREPRFCVRV*SCGSAQ
Trigger: CTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAA...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR GCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGACAGCGCTGGAGAAGATaGGACACCCACGGCTTTAAT +
Preference number: 2 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGQRWRR*DTHGFN
Trigger: ATTAAAGCCGTGGGTGTCGCATCTTCTCCAGCGCTG...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR GCA 72 bp CTCCGCGGCTCGCTGCTCTTTGGAAGCTGGAGGCCGTaGCCCCTGCCGCCCTCCTCACAGCCGGGCCGGGCA +
Preference number: 3 (lower is better)
Translates to: LRGSLLFGSWRP*PLPPSSQPGRA
Trigger: TGCCCGGCCCGGCTGTGAGGAGGGCGGCAGGGGGCACGGCCTCCAGCTTCCAAAGAGCAGCGAGCCGCGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR TCA 72 bp TGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTaGTTGTGCCGGCCCCATAAGGGAGGAGGGCCCCGG +
Preference number: 3 (lower is better)
Translates to: CQSLQLRLRPAH*LCRPHKGGGPR
Trigger: CCGGGGCCCTCCTCCCTTATGGGGCCGGCACAATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR CAA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGAAGCCACAGAAGCTTaGAGGGACCCTGGCGTGGAG +
Preference number: 3 (lower is better)
Translates to: LDAPRGTWARGGFLKARLEATEA*RDPGVE
Trigger: CTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR CAA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGAAGCCACAGAAGCTTaGAGGGACCCTGGCGTGGAG +
Preference number: 3 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLEATEA*RDPGVE
Trigger: CTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTC...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR CCA 72 bp CGGGCGGCGCTCACGAATCGCACAATAGTCATGGGGTaGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTC +
Preference number: 3 (lower is better)
Translates to: RAALTNRTIVMG*GSHGTEEKRGL
Trigger: GAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGCGCCGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR GCA 72 bp TCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTaGGGCTCCGCCCAGCCCACTGATTGTGCCGGCCCC +
Preference number: 3 (lower is better)
Translates to: SLRHVFCVRVCS*GSAQPTDCAGP
Trigger: GGGGCCGGCACAATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR GCA 72 bp GCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTaGAGCTGCGGCTCCGCCCAGCCCACTGATTGTGCC +
Preference number: 3 (lower is better)
Translates to: AGSLRHVFCVRV*SCGSAQPTDCA
Trigger: GGCACAATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR-3UTR CAA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATCTTAAGGCACGTCTTTaGTGTCAGAGTTTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHLKARL*CQSLQL
Trigger: CAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR CAA 72 bp CTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTaGGAAGCTGGAGGCCGTGCCCCCTGCCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LWALPGSAARCS*EAGGRAPCRPP
Trigger: AGGAGGGCGGCAGGGGGCACGGCCTCCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGCTGCTGTGGCACTGTaGCCGTGGGGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLAAVAL*PWGPRL
Trigger: CAGCCGGGGCCCCCACGGGCACAGTGCCACAGCAGC...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGCCCGTGCTCGGCTGCTaGCCCACCGCCACGCCGTTG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLPVLGC*PTATPL
Trigger: CAACGGCGTGGCGGTGGGGCAGCAGCCGAGCACGGG...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTGGCTGTGCCTGGGGCTaGGGGCTCTGCAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAGCAWG*GLCSSV
Trigger: CACCGAGCTGCAGAGCCCCCAGCCCCAGGCACAGCC...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGGAACGCCGGTCTGGCTaGCGGTGGAGCCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWERRSG*RWSRGW
Trigger: CCAGCCCCGGCTCCACCGCCAGCCAGACCGGCGTTC...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTGTAGGAACGCCGGTCTaGCTGGCGGTGGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAVGTPV*LAVEPG
Trigger: CCCCGGCTCCACCGCCAGCCAGACCGGCGTTCCTAC...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGGCCGCCAGCCGCCAGTaGGATGTCCTGCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWAASRQ*DVLRQL
Trigger: GAGCTGCCGCAGGACATCTCACTGGCGGCTGGCGGC...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGTTGTGGCGGGGCCTGTaGCGGCTGGGATGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWLWRGL*RLGWWR
Trigger: CCGCCACCATCCCAGCCGCCACAGGCCCCGCCACAA...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTTGTGGCGGGGCCTGTaGCGGCTGGGATGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLLWRGL*RLGWWR
Trigger: CCGCCACCATCCCAGCCGCCACAGGCCCCGCCACAA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTGCCACGTGGACTGGCTaGAGGCCCTGCACGGTCAGC +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAATWTG*RPCTVS
Trigger: GCTGACCGTGCAGGGCCTCCAGCCAGTCCACGTGGC...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGTGGGAGGACGGGGCTaGGGAGAAGACGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLVGGRG*GEDAGA
Trigger: GGCCCCAGCGTCTTCTCCCCAGCCCCGTCCTCCCAC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGGTGCACCGGTTGGCTaGGAGGGTGCGGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLGAPVG*EGAGTA
Trigger: GGCTGTACCCGCACCCTCGCAGCCAACCGGTGCACC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTGTGACGGGGACACTCTaGTGGACGCCGTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAVTGTL*WTPWTC
Trigger: GCAGGTCCACGGCGTCCAGCAGAGTGTCCCCGTCAC...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTGCCACCACCTCCGCTaGTGTTGCTGGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLCHHLR*CCWPQP
Trigger: GGGCTGGGGCCAGCAACAGCAGCGGAGGTGGTGGCA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTTGGAGTTGCCCCTGGTaGCCAGACGGCGGGTTCGCA +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAWSCPW*PDGGFA
Trigger: TGCGAACCCGCCGTCTGGGCACCAGGGGCAACTCCA...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTAGCCAGGCCGCCCACTaGTCCAGCGAGTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEASQAAH*SSEFCC
Trigger: GCAGCAGAACTCGCTGGAGCAGTGGGCGGCCTGGCT...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTAGCCGGGCCGGGCAGTaGCCCCTTCTTGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLSRAGQ*PLLELG
Trigger: CCCAAGCTCAAGAAGGGGGCACTGCCCGGCCCGGCT...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGGTGGGTGCACCGGTTaGCTGCGAGGGTGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLGGCTG*LRGCGY
Trigger: GTACCCGCACCCTCGCAGCCAACCGGTGCACCCACC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGTGCAGGCGAAGGGGTaGGTGCACCGGTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLVQAKG*VHRLAA
Trigger: CGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCAC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGGGGCGACACGTGGCCTaGCTTGGCCTGCACGCTCGT +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWGRHVA*LGLHAR
Trigger: ACGAGCGTGCAGGCCAAGCCAGGCCACGTGTCGCCC...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGCACCGGGCCGGGTTTaGGCGCTTGTGGAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLAPGRV*ALVEWP
Trigger: AGGCCACTCCACAAGCGCCCAAACCCGGCCCGGTGC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGCAGTGCTGGTGGAGCTaGCGACGACCTGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLQCWWS*RRPGCR
Trigger: CCGGCAGCCAGGTCGTCGCCAGCTCCACCAGCACTG...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGAGCTTTGAGGGACCCTaGCGTGGAGGGGTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWSFEGP*RGGVAG
Trigger: CCCCGCCACCCCTCCACGCCAGGGTCCCTCAAAGCT...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTAGCTGCTGCACCTCTTaGGCCACGTGGACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEASCCTS*ATWTGW
Trigger: CCAGCCAGTCCACGTGGCTCAAGAGGTGCAGCAGCT...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTCTCCGCCCAGCCCACTaGTTGTGCCGGCCCCATAAG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLLRPAH*LCRPHK
Trigger: CTTATGGGGCCGGCACAATCAGTGGGCTGGGCGGAG...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGCTCCGCCCAGCCCACTaGTTGTGCCGGCCCCATAAG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLLRPAH*LCRPHK
Trigger: CTTATGGGGCCGGCACAATCAGTGGGCTGGGCGGAG...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGGCAGTGCCCCCTTCTTaGGCTTGGGGGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWAVPPS*AWGQGR
Trigger: CCTCCCTTGCCCCCAAGCTCAAGAAGGGGGCACTGC...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGCAGTGCCCCCTTCTTaGGCTTGGGGGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLAVPPS*AWGQGR
Trigger: CCTCCCTTGCCCCCAAGCTCAAGAAGGGGGCACTGC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTCCGTGGACCTGCAGCTaGTGTGGCACTGTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLPWTCS*CGTVPV
Trigger: CACGGGCACAGTGCCACAGCAGCTGCAGGTCCACGG...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTTGGCGACGACCTGGCTaGCGGACACGTACATGGGCA +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAWRRPG*RTRTWA
Trigger: TGCCCATGTACGTGTCCGGCAGCCAGGTCGTCGCCA...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTGGAGTTGCCCCTGGTaGCCAGACGGCGGGTTCGCA +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLWSCPW*PDGGFA
Trigger: TGCGAACCCGCCGTCTGGGCACCAGGGGCAACTCCA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGCTGGAGGGCAGCGCCTaGACGAAGAGGCCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPLEGSA*TKRPRA
Trigger: CGCGCGCGGCCTCTTCGTGCAGGCGCTGCCCTCCAG...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTACACGTGGCCTGGCTTaGCCTGCACGCTCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEATRGLA*PARSSG
Trigger: TCCAGACGAGCGTGCAGGCCAAGCCAGGCCACGTGT...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGACGGGGACACTCTGCTaGACGCCGTGGACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLTGTLC*TPWTCS
Trigger: GCTGCAGGTCCACGGCGTCCAGCAGAGTGTCCCCGT...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTGAGCTGGCGACGACCTaGCTGCCGGACACGTACATG +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAELATT*LPDTYM
Trigger: CATGTACGTGTCCGGCAGCCAGGTCGTCGCCAGCTC...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR CAA 72 bp CTCACAGCCGGGCCGGGCAGTGCCCCCTTCTTGAGCTaGGGGGCAAGGGAGGGCCCAGCGCTGGAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LTAGPGSAPFLS*GAREGPALEKM
Trigger: CATCTTCTCCAGCGCTGGGCCCTCCCTTGCCCCCAAGCTCAAGAAGGGGGCACTGCCCGGCCCGGCTGTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGTGACATATTGGGGCTaGGGGGTGGCAGCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLVTYWG*GVAAAV
Trigger: CACCGCTGCTGCCACCCCTCAGCCCCAATATGTCAC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGGGAGGTCGAGCTCTGTaGAGTCAGGGAGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWGGRAL*SQGGSE
Trigger: CTCGGAGCCTCCCTGACTTCACAGAGCTCGACCTCC...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTCCTCACTGGGCTGGCTaGGGTTGTACCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAPHWAG*GCTSRR
Trigger: CCTTCTGGAGGTACAACCTCAGCCAGCCCAGTGAGG...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGCTCGCGTTGCCGGGTTaGTTGGTCGCCACGACTACC +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLLALPG*LVATTT
Trigger: GGTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAG...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGAGCTCCGTCACGTACTaGTTCTGGCCACCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWSSVTY*FWPPGG
Trigger: GCCACCGGGTGGCCAGAAGCAGTACGTGACGGAGCT...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTGCTCTGGGGGCGAGTaGACCTGCTGGGTACCATGG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLCSGGE*TCWVPW
Trigger: CCATGGTACCCAGCAGGTGCACTCGCCCCCAGAGCA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTGGACGCCGTGGACCTaGAGCTGCTGTGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLWTPWT*SCCGTV
Trigger: CACAGTGCCACAGCAGCTGCAGGTCCACGGCGTCCA...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTGGACGCCGTGGACCTaGAGCTGCTGTGGCACTGTG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLWTPWT*SCCGTV
Trigger: CACAGTGCCACAGCAGCTGCAGGTCCACGGCGTCCA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTCTGGTGCTTGCCGTCTaGGTGTACAGCGGCGTCTCG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLLVLAV*VYSGVS
Trigger: CGAGACGCCGCTGTACACGCAGACGGCAAGCACCAG...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGCTGGTGCTTGCCGTCTaGGTGTACAGCGGCGTCTCG +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWLVLAV*VYSGVS
Trigger: CGAGACGCCGCTGTACACGCAGACGGCAAGCACCAG...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTAGTGGCAGTAGAGGGTaGTCCGTGGCAGACTCACGC +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEASGSRG*SVADSR
Trigger: GCGTGAGTCTGCCACGGAGCACCCTCTACTGCCACT...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGCGCATGGCCATGTGCTaGTGGTCCTCCATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLRMAMC*WSSISR
Trigger: GCGGCTGATGGAGGACCAGCAGCACATGGCCATGCG...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGCTGGGGCTGGGCTTGTaGCGGGGCCTGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWLGLGL*RGLWRL
Trigger: CAGCCGCCACAGGCCCCGCCACAAGCCCAGCCCCAG...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGTCACGTACTGCTTCTaGCCACCCGGTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLVTYCF*PPGGCA
Trigger: GGCACAGCCACCGGGTGGCCAGAAGCAGTACGTGAC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGCCGACACTGTCTCGCTaGCCCGCATGGCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWPTLSR*PAWHLQ
Trigger: CTGAAGGTGCCATGCGGGCCAGCGAGACAGTGTCGG...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGACACGTGGCCTGGCTTaGCCTGCACGCTCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLTRGLA*PARSSG
Trigger: TCCAGACGAGCGTGCAGGCCAAGCCAGGCCACGTGT...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACACACCGGCGACTGCTCTaGGGGCGAGTGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTHRRLL*GRVHLL
Trigger: CAGCAGGTGCACTCGCCCCCAGAGCAGTCGCCGGTG...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGCTGGAGTACACGTGTaGGACGGGCACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLAGVHV*DGHLLE
Trigger: CTCCAGCAGGTGCCCGTCCCACACGTGTACTCCAGC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTCACTGGCCGTGTAGCTaGCATCGCCGCCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLHWPCS*HRRPPH
Trigger: ATGTGGAGGGCGGCGATGCCAGCTACACGGCCAGTG...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTCGGCCTCGTAGTAGCTaGTGCTTGCCGTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEARPRSS*CLPSAC
Trigger: ACACGCAGACGGCAAGCACCAGCTACTACGAGGCCG...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGTAGAGGGTGCTCCGTaGCAGACTCACGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLVEGAP*QTHALS
Trigger: GCTGAGGGCGTGAGTCTGCCACGGAGCACCCTCTAC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGTAGAGGGTGCTCCGTaGCAGACTCACGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLVEGAP*QTHALS
Trigger: GCTGAGGGCGTGAGTCTGCCACGGAGCACCCTCTAC...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGATGTACAGCCAGCGGTaGCGCCTCACTGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLMYSQR*RLTGLA
Trigger: AGCCAGCCCAGTGAGGCGCCACCGCTGGCTGTACAT...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTGCACGGGCTCGAACTTaGAGAGGAGCACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAARART*RGAPGW
Trigger: CCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGC...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGCTTGGGTCAAGGCACTaGGGATGGGCCGCAGCACGT +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLLGSRH*GWAAAR
Trigger: ACGTGCTGCGGCCCATCCCCAGTGCCTTGACCCAAG...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGGGGGGTTCAGGGAGGTaGCCAGATTGGCGAACTCGC +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWGGSGR*PDWRTR
Trigger: GCGAGTTCGCCAATCTGGCCACCTCCCTGAACCCCC...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGTTGGCTGCGAGGGTaGGGGTACAGCCGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPGWLRG*GYSREL
Trigger: GAGCTCCCGGCTGTACCCGCACCCTCGCAGCCAACC...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTCCGCCCTCCACATACTaGACCTGGCTGGAGTACACG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLPPSTY*TWLEYT
Trigger: CGTGTACTCCAGCCAGGTGCAGTATGTGGAGGGCGG...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTAGTGGCAGTAGAGGGTaGTCCGTGGCAGACTCACGC +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLSGSRG*SVADSR
Trigger: GCGTGAGTCTGCCACGGAGCACCCTCTACTGCCACT...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGGGAAGCTGGAGGCCGTaGCCCCTGCCGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGGSWRP*PLPPSS
Trigger: TGAGGAGGGCGGCAGGGGGCACGGCCTCCAGCTTCC...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTCGACTACCGTGGCTATaGCGCCTCCGTTTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLRLPWL*RLRFPH
Trigger: GTGAGGGAAACGGAGGCGCCATAGCCACGGTAGTCG...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAACCCGGTGGCTGTGCCTaGGGCTGGGGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGEPGGCA*GWGLCS
Trigger: GCTGCAGAGCCCCCAGCCCCAGGCACAGCCACCGGG...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGCCTGCTGGGGCACTTaGATGTTGGTCAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLACWGT*MLVSWR
Trigger: CCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGCCCCGGCTGTCTTGCTaGAAGAGCTGTTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLPRLSC*KSCWPA
Trigger: TGCAGGCCAACAGCTCTTCCAGCAAGACAGCCGGGG...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTCATACTGCACCTGGCTaGAGTACACGTGTGGGACGG +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAHTAPG*STRVGR
Trigger: CCGTCCCACACGTGTACTCCAGCCAGGTGCAGTATG...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGAGGTGCTGGAACGGATaGCACTGGCCGTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWRCWNG*HWPCSW
Trigger: CCAGCTACACGGCCAGTGCCATCCGTTCCAGCACCT...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTGCCGGACACGTACATaGGCATGGAGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLCRTRT*AWSHCW
Trigger: CCAGCAGTGGCTCCATGCCCATGTACGTGTCCGGCA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGGGAGCCACTGGACCGTaGCTGGCGAGGCACGGGTGG +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGGATGP*LARHGW
Trigger: CCACCCGTGCCTCGCCAGCCACGGTCCAGTGGCTCC...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAAGGGCTGGCCCCGCATaGCCATGTGCTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTRAGPA*PCAAGP
Trigger: AGGACCAGCAGCACATGGCCATGCGGGGCCAGCCCT...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGGCAGCACCTTGCCCTaGAGGTCGAGCTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLGSTLP*RSSSVK
Trigger: CTTCACAGAGCTCGACCTCCAGGGCAAGGTGCTGCC...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAGGCCAAGGGCTTAGCTaGAGGGCAGCGCCTGCACGA +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTGQGLS*RAAPAR
Trigger: TCGTGCAGGCGCTGCCCTCCAGCTAAGCCCTTGGCC...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAATGCCTGCCTGCCCCCTaGGGTGGTGGGAGGACGGGG +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGECLPAP*GGGRTG
Trigger: CCCCGTCCTCCCACCACCCCAGGGGGCAGGCAGGCA...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGCAGATCTCTCTTGGGTaGCGGGGACACTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWQISLG*RGHSAG
Trigger: TCCAGCAGAGTGTCCCCGTCACCCAAGAGAGATCTG...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAAGCTGCTGCACCTCTTaGGCCACGTGGACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTSCCTS*ATWTGW
Trigger: CCAGCCAGTCCACGTGGCTCAAGAGGTGCAGCAGCT...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGGGACCTGGAAGGCTTTaGTGTCCCCGGGCCCGACGC +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWGPGRL*CPRARR
Trigger: GCGTCGGGCCCGGGGACATCAAAGCCTTCCAGGTCC...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACCTCCGGTGCTGCCACTaGCACCCCCGCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHLRCCH*HPRHRL
Trigger: GAGGCGGTGGCGGGGGTGGCAGTGGCAGCACCGGAG...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTACGGGCTCCAGCTTCTaGTCCTGGCAGTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLTGSSF*SWQCSK
Trigger: CTTACTGCACTGCCAGGAGCAGAAGCTGGAGCCCGT...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCCCGTGCTCGGCTGCTaGCCCACCGCCACGCCGTTG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCPVLGC*PTATPL
Trigger: CAACGGCGTGGCGGTGGGGCAGCAGCCGAGCACGGG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAATGTCCGACAGCCCCGTaGTCGGCTGCTGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGECPTAP*SAAAPP
Trigger: CGGTGGGGCAGCAGCCGAGCACGGGGCTGTCGGACA...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTGCTCCAGCGAGTTCTaGTGCTGCAGCGTCACCTTG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLCSSEF*CCSVTL
Trigger: CAAGGTGACGCTGCAGCAGCAGAACTCGCTGGAGCA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGAGCCAGGCCGCCCACTaGTCCAGCGAGTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPSQAAH*SSEFCC
Trigger: GCAGCAGAACTCGCTGGAGCAGTGGGCGGCCTGGCT...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTCTGGAGGGCAGCGCCTaGACGAAGAGGCCGCGCGCG +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRLEGSA*TKRPRA
Trigger: CGCGCGCGGCCTCTTCGTGCAGGCGCTGCCCTCCAG...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGCCCAGGACAGGCTGTaGAAAGCCAGCGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLAQDRL*KASELN
Trigger: ATTCAGCTCGCTGGCTTTGCACAGCCTGTCCTGGGC...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCTGCTGGCCACCGCCTaGGAGGTGGCGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCLLATA*EVAGVL
Trigger: CAGCACCCCCGCCACCTCCCAGGCGGTGGCCAGCAG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGACTGCTGGCCACCGCCTaGGAGGTGGCGGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGLLATA*EVAGVL
Trigger: CAGCACCCCCGCCACCTCCCAGGCGGTGGCCAGCAG...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGCCCCAGCCCCAGTGCTaGTGGAGCTGGCGACGACCT +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGPQPQC*WSWRRP
Trigger: AGGTCGTCGCCAGCTCCACCAGCACTGGGGCTGGGG...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGCTCCGCTGCTGTTGCTaGCCCCAGCCCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWLRCCC*PQPQCW
Trigger: CCAGCACTGGGGCTGGGGCCAGCAACAGCAGCGGAG...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGAGGGCTGGCCCCGCATaGCCATGTGCTGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPRAGPA*PCAAGP
Trigger: AGGACCAGCAGCACATGGCCATGCGGGGCCAGCCCT...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAATGTACAGCCAGCGGTaGCGCCTCACTGGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTMYSQR*RLTGLA
Trigger: AGCCAGCCCAGTGAGGCGCCACCGCTGGCTGTACAT...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTAAGTTCCGGATCGCTTaGGTCAAGGCACTGGGGATG +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAKFRIA*VKALGM
Trigger: CATCCCCAGTGCCTTGACCCAAGCGATCCGGAACTT...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTATGTTGACCATGGCGTaGGTGAGCCAGCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLMLTMA*VSQLSR
Trigger: CCTGGAGAGCTGGCTCACCCACGCCATGGTCAACAT...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGAGAGCTTGGCGGCCTTaGGGAAGCCGGCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGRAWRP*GSRRCP
Trigger: AGGGCAGCGCCGGCTTCCCCAAGGCCGCCAAGCTCT...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTGGGGGTCTCGCCCTTaGCCTGGGCTACGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWWGSRP*PGLRGA
Trigger: AGCACCGCGTAGCCCAGGCCAAGGGCGAGACCCCCA...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTGCTGCACCTGGGCGCTaGTGTCCGACAGCCCCGTGC +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRAAPGR*CPTAPC
Trigger: GCACGGGGCTGTCGGACATCAGCGCCCAGGTGCAGC...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGTGCCCTGGTAGGGCTTaGGCACCTGGCTCACCACGC +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGCPGRA*APGSPR
Trigger: GCGTGGTGAGCCAGGTGCTCAAGCCCTACCAGGGCA...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTGTAGAAGGACCACTTaGGGAGGAAGAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LDAPRGTWARGGFLKARLCRRTT*GGRAWR
Trigger: CCGCCAAGCTCTTCCTCCTCAAGTGGTCCTTCTACA...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACGCCGCCAGCCGCCAGTaGGATGTCCTGCGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHAASRQ*DVLRQL
Trigger: GAGCTGCCGCAGGACATCTCACTGGCGGCTGGCGGC...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGGCTGCTGTGGCACTGTaGCCGTGGGGGCCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQAAVAL*PWGPRL
Trigger: CAGCCGGGGCCCCCACGGGCACAGTGCCACAGCAGC...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGCTGGGTGGCCGTGCCTaGGGCCTCGTAGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGLGGRA*GLVVAG
Trigger: ACCAGCTACTACGAGGCCGCAGGCACGGCCACCCAG...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTCCGGTGCTGCCACTaGCACCCCCGCCACCGCCTC +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQLRCCH*HPRHRL
Trigger: GAGGCGGTGGCGGGGGTGGCAGTGGCAGCACCGGAG...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGATCTGTGCGGTGTTCTaGAGCACAGCGCGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWICAVF*STARAA
Trigger: GGCGGCGCGCGCTGTGCTGCAGAACACCGCACAGAT...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTCCAGCGAGTTCTGCTaGTGCAGCGTCACCTTGAAG +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLSSEFC*CSVTLK
Trigger: CTTCAAGGTGACGCTGCAGCAGCAGAACTCGCTGGA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCGGAAGCTGGAGGCCGTaGCCCCTGCCGCCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCGSWRP*PLPPSS
Trigger: TGAGGAGGGCGGCAGGGGGCACGGCCTCCAGCTTCC...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACATCGCCACGACTACCGTaGCTATGGCGCCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTSPRLP*LWRLRF
Trigger: GAAACGGAGGCGCCATAGCCACGGTAGTCGTGGCGA...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGGCTGTGCCTGGGGCTaGGGGCTCTGCAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGGCAWG*GLCSSV
Trigger: CACCGAGCTGCAGAGCCCCCAGCCCCAGGCACAGCC...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCCCGGTGGCTGTGCCTaGGGCTGGGGGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQPGGCA*GWGLCS
Trigger: GCTGCAGAGCCCCCAGCCCCAGGCACAGCCACCGGG...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGCCGACACTGTCTCGCTaGCCCGCATGGCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPPTLSR*PAWHLQ
Trigger: CTGAAGGTGCCATGCGGGCCAGCGAGACAGTGTCGG...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACCGGTGGAGCCGGGGCTaGCCTCCGACACTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHRWSRG*PPTLSR
Trigger: GCGAGACAGTGTCGGAGGCCAGCCCCGGCTCCACCG...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGGAACGCCGGTCTGGCTaGCGGTGGAGCCGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQERRSG*RWSRGW
Trigger: CCAGCCCCGGCTCCACCGCCAGCCAGACCGGCGTTC...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAATGGAGGGGCGACACGTaGCCTGGCTTGGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGEWRGDT*PGLACT
Trigger: CGTGCAGGCCAAGCCAGGCCACGTGTCGCCCCTCCA...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACATGGATGTTGGTCAGCTaGAGGGGCGACACGTGGCCT +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTWMLVS*RGDTWP
Trigger: AGGCCACGTGTCGCCCCTCCAGCTGACCAACATCCA...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAGGGGCACTTGGATGTTaGTCAGCTGGAGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTGALGC*SAGGAT
Trigger: TGTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCC...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGGCCACCTTTGCTGCCTaGGGCTGCGCTCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWATFAA*GCALHH
Trigger: GTGGTGCAGAGCGCAGCCCCAGGCAGCAAAGGTGGC...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGACCGTCAGGGAGACCTaGCCACCTTTGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPTVRET*PPLLPG
Trigger: CCCAGGCAGCAAAGGTGGCCAGGTCTCCCTGACGGT...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTGTGGCACTGTGCCCGTaGGGGCCCCGGCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRVALCP*GPRLSC
Trigger: GCAAGACAGCCGGGGCCCCCACGGGCACAGTGCCAC...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGCTCTGCTGGACGCCGTaGACCTGCAGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWLCWTP*TCSCCG
Trigger: GCCACAGCAGCTGCAGGTCCACGGCGTCCAGCAGAG...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGACCACAGATCTCTCTTaGGTGACGGGGACACTCTGC +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLTTDLS*VTGTLC
Trigger: GCAGAGTGTCCCCGTCACCCAAGAGAGATCTGTGGT...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGAGCTGGCGACGACCTaGCTGCCGGACACGTACATG +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPELATT*LPDTYM
Trigger: CATGTACGTGTCCGGCAGCCAGGTCGTCGCCAGCTC...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAACCCCAGCCCCAGTGCTaGTGGAGCTGGCGACGACCT +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGEPQPQC*WSWRRP
Trigger: AGGTCGTCGCCAGCTCCACCAGCACTGGGGCTGGGG...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTGGAGCCACTGGACCGTaGCTGGCGAGGCACGGGTGG +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRGATGP*LARHGW
Trigger: CCACCCGTGCCTCGCCAGCCACGGTCCAGTGGCTCC...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTGCATCCAAAAATTGCTaGTACTGCTGCACCTGGGCG +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAASKNC*YCCTWA
Trigger: CGCCCAGGTGCAGCAGTACCAGCAATTTTTGGATGC...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTATTTCCACCAGGCCCTaGTACAGCACGTTGTCACAG +
Preference number: 4 (lower is better)
Translates to: EGPGLPCLGVPLPALAEAISTRP*YSTLSQ
Trigger: CTGTGACAACGTGCTGTACCAGGGCCTGGTGGAAAT...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGGGTCCCGGATCACCATaGAGCTGTAGAAGGACCACT +
Preference number: 4 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWGPGSP*SCRRTT
Trigger: AGTGGTCCTTCTACAGCTCCATGGTGATCCGGGACC...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGGTCTCGCCCTTGGCCTaGGCTACGCGGTGCTCGATC +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGVSPLA*ATRCSI
Trigger: GATCGAGCACCGCGTAGCCCAGGCCAAGGGCGAGAC...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGACAGTCCGCGCCAGCTTaGCCGGCGGCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGQSAPA*PAAPGS
Trigger: AGACCCTGGAGCCGCCGGCCAAGCTGGCGCGGACTG...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCAGTCCGCGCCAGCTTaGCCGGCGGCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCQSAPA*PAAPGS
Trigger: AGACCCTGGAGCCGCCGGCCAAGCTGGCGCGGACTG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
3UTR CAA 72 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTaGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARL*CQSLQLRLRPA
Trigger: GGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTAGGTGGCGGGGGTGCTaGCCTGGGTGGCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPRWRGC*PGWPCL
Trigger: CAGGCACGGCCACCCAGGTCAGCACCCCCGCCACCT...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGGGAGGTCGAGCTCTGTaGAGTCAGGGAGGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWGGRAL*SQGGSE
Trigger: CTCGGAGCCTCCCTGACTTCACAGAGCTCGACCTCC...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACGGACCTGGAAGGCTTTaGTGTCCCCGGGCCCGACGC +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHGPGRL*CPRARR
Trigger: GCGTCGGGCCCGGGGACATCAAAGCCTTCCAGGTCC...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTTGGCGAACTCGCCCATaGCGGCGATGGGGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRWRTRP*RRWGSR
Trigger: GCGAGACCCCCATCGCCGTCATGGGCGAGTTCGCCA...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTTGGCGAACTCGCCCATaGCGGCGATGGGGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIWRTRP*RRWGSR
Trigger: GCGAGACCCCCATCGCCGTCATGGGCGAGTTCGCCA...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGCTCGCGTTGCCGGGTTaGTTGGTCGCCACGACTACC +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGLALPG*LVATTT
Trigger: GGTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAG...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGAGTATACGCCTGTGTTaGCATGCCAACGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLSIRLC*HANGGE
Trigger: TTCCCCACCGTTGGCATGGCAACACAGGCGTATACT...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCGGTTGGCTGCGAGGGTaGGGGTACAGCCGGGAGCTC +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCGWLRG*GYSREL
Trigger: GAGCTCCCGGCTGTACCCGCACCCTCGCAGCCAACC...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTAGGCGAAGGGGTGGGTaGACCGGTTGGCTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIRRRGG*TGWLRG
Trigger: CCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCT...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTCCTGGGGCTGCGCTCTaGACCACCAGACGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRPGAAL*TTRRCV
Trigger: CACGCAGCGTCTGGTGGTGCAGAGCGCAGCCCCAGG...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTCCTGGGGCTGCGCTCTaGACCACCAGACGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIPGAAL*TTRRCV
Trigger: CACGCAGCGTCTGGTGGTGCAGAGCGCAGCCCCAGG...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGGGGCCCCGGCTGTCTTaGTGGAAGAGCTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGGPRLS*WKSCWP
Trigger: AGGCCAACAGCTCTTCCAGCAAGACAGCCGGGGCCC...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGGGGCCCCGGCTGTCTTaGTGGAAGAGCTGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWGPRLS*WKSCWP
Trigger: AGGCCAACAGCTCTTCCAGCAAGACAGCCGGGGCCC...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGTGCACGGTCAGCGGCTaGACCGGGCCGGGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQCTVSG*TGPGLG
Trigger: GCCCAAACCCGGCCCGGTGCAGCCGCTGACCGTGCA...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTTGGCCCCAGCCCCAGTaGTGGTGGAGCTGGCGACGA +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRWPQPQ*WWSWRR
Trigger: TCGTCGCCAGCTCCACCAGCACTGGGGCTGGGGCCA...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGCCTCAGGCAGCACCTTaGCCTGGAGGTCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWPQAAP*PGGRAL
Trigger: CAGAGCTCGACCTCCAGGGCAAGGTGCTGCCTGAGG...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGGTCAGAGTTTGCAGCTaGGGCTCCGCCCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWVRVCS*GSAQPT
Trigger: AGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGAC...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACAGCCGGGCCGGGCAGTaGCCCCTTCTTGAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHSRAGQ*PLLELG
Trigger: CCCAAGCTCAAGAAGGGGGCACTGCCCGGCCCGGCT...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGTCGCCACGACTACCGTaGCTATGGCGCCTCCGTTTC +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPSPRLP*LWRLRF
Trigger: GAAACGGAGGCGCCATAGCCACGGTAGTCGTGGCGA...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTCTGGGGCTGGGCTTGTaGCGGGGCCTGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPLGLGL*RGLWRL
Trigger: CAGCCGCCACAGGCCCCGCCACAAGCCCAGCCCCAG...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGGTCACGTACTGCTTCTaGCCACCCGGTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGVTYCF*PPGGCA
Trigger: GGCACAGCCACCGGGTGGCCAGAAGCAGTACGTGAC...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTGCCTGCACGCTCGTCTaGACCAGCAGCCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRACTLV*TSSRCW
Trigger: CCAGCAGCGGCTGCTGGTCCAGACGAGCGTGCAGGC...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCTGCACGCTCGTCTaGACCAGCAGCCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGACTLV*TSSRCW
Trigger: CCAGCAGCGGCTGCTGGTCCAGACGAGCGTGCAGGC...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAGTGGGAAGAGCCTGCTaGGGCACTTGGATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTVGRAC*GTWMLV
Trigger: GACCAACATCCAAGTGCCCCAGCAGGCTCTTCCCAC...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGGGCGAGTGCACCTGCTaGGTACCATGGACCGTCAGG +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGGECTC*VPWTVR
Trigger: CCTGACGGTCCATGGTACCCAGCAGGTGCACTCGCC...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGCCCCGGCTGTCTTGCTaGAAGAGCTGTTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPPRLSC*KSCWPA
Trigger: TGCAGGCCAACAGCTCTTCCAGCAAGACAGCCGGGG...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCGTGGCACTGTGCCCGTaGGGGCCCCGGCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACVALCP*GPRLSC
Trigger: GCAAGACAGCCGGGGCCCCCACGGGCACAGTGCCAC...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACGCACCGGGCCGGGTTTaGGCGCTTGTGGAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHAPGRV*ALVEWP
Trigger: AGGCCACTCCACAAGCGCCCAAACCCGGCCCGGTGC...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACGCCACGTGGACTGGCTaGAGGCCCTGCACGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHATWTG*RPCTVS
Trigger: GCTGACCGTGCAGGGCCTCCAGCCAGTCCACGTGGC...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGTTGAGCCACGTGGACTaGCTGGAGGCCCTGCACGGT +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGLSHVD*LEALHG
Trigger: ACCGTGCAGGGCCTCCAGCCAGTCCACGTGGCTCAA...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGGCTGGAGTACACGTGTaGGACGGGCACCTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGAGVHV*DGHLLE
Trigger: CTCCAGCAGGTGCCCGTCCCACACGTGTACTCCAGC...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCTCCGCTGCTGTTGCTaGCCCCAGCCCCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCLRCCC*PQPQCW
Trigger: CCAGCACTGGGGCTGGGGCCAGCAACAGCAGCGGAG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCCACTGGACCGTGGCTaGCGAGGCACGGGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCPLDRG*RGTGGV
Trigger: CACACCACCCGTGCCTCGCCAGCCACGGTCCAGTGG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGTGGTACTGCTGCACCTaGGCGCTGATGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPWYCCT*ALMSDS
Trigger: GCTGTCGGACATCAGCGCCCAGGTGCAGCAGTACCA...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTAGAGCTTGGCGGCCTTaGGGAAGCCGGCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIRAWRP*GSRRCP
Trigger: AGGGCAGCGCCGGCTTCCCCAAGGCCGCCAAGCTCT...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTTGGGGGTCTCGCCCTTaGCCTGGGCTACGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIWGSRP*PGLRGA
Trigger: AGCACCGCGTAGCCCAGGCCAAGGGCGAGACCCCCA...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGGGCGGTTGTTGTTGTTaGCTCGCGTTGCCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGGGCCC*LALPGC
Trigger: GCAACCCGGCAACGCGAGTCAACAACAACAACCGCC...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACACACCTTCAGAGACAGTaGCCACGATGTACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTHLQRQ*PRCTAG
Trigger: CCCAGCAGTACATCGTGGTCACTGTCTCTGAAGGTG...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTTGCCCTGGTAGGGCTTaGGCACCTGGCTCACCACGC +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLICPGRA*APGSPR
Trigger: GCGTGGTGAGCCAGGTGCTCAAGCCCTACCAGGGCA...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGCTGAGGCTGGAGCAGTaGCCACGAAGCCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWLRLEQ*PRSHRS
Trigger: GCTTCTGTGGCTTCGTGGTCACTGCTCCAGCCTCAG...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCAGGCGAAGGGGTGGGTaGACCGGTTGGCTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACRRRGG*TGWLRG
Trigger: CCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCT...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTGGGGGCGAGTGCACCTaGTGGGTACCATGGACCGTC +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRGGECT*WVPWTV
Trigger: GACGGTCCATGGTACCCAGCAGGTGCACTCGCCCCC...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGAAGAGCTGTTGGCCTaGACCGGCGACTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGEEELLA*TGDCSG
Trigger: CCCAGAGCAGTCGCCGGTGCAGGCCAACAGCTCTTC...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGTGACGGGGACACTCTaGTGGACGCCGTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIVTGTL*WTPWTC
Trigger: GCAGGTCCACGGCGTCCAGCAGAGTGTCCCCGTCAC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATTGCACGGTCAGCGGCTaGACCGGGCCGGGTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHCTVSG*TGPGLG
Trigger: GCCCAAACCCGGCCCGGTGCAGCCGCTGACCGTGCA...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCACCTCCGCTGCTGTTaGTGGCCCCAGCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQHLRCC*WPQPQC
Trigger: GCACTGGGGCTGGGGCCAGCAACAGCAGCGGAGGTG...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTTGTCCGACAGCCCCGTaGTCGGCTGCTGCCCCACCG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPCPTAP*SAAAPP
Trigger: CGGTGGGGCAGCAGCCGAGCACGGGGCTGTCGGACA...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACATTTTGTGTCAGAGTTTaGAGCTGCGGCTCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTFCVRV*SCGSAQ
Trigger: CTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAA...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGTAGGAACGCCGGTCTaGCTGGCGGTGGAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPVGTPV*LAVEPG
Trigger: CCCCGGCTCCACCGCCAGCCAGACCGGCGTTCCTAC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTGGATGTTGGTCAGCTaGAGGGGCGACACGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWWMLVS*RGDTWP
Trigger: AGGCCACGTGTCGCCCCTCCAGCTGACCAACATCCA...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGGCCTGCTGGGGCACTTaGATGTTGGTCAGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWACWGT*MLVSWR
Trigger: CCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGC...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGCCACCTTTGCTGCCTaGGGCTGCGCTCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIATFAA*GCALHH
Trigger: GTGGTGCAGAGCGCAGCCCCAGGCAGCAAAGGTGGC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCACCGGCGACTGCTCTaGGGGCGAGTGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQHRRLL*GRVHLL
Trigger: CAGCAGGTGCACTCGCCCCCAGAGCAGTCGCCGGTG...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGGCATGGAGCCACTGCTaGCCACCGCCTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQAWSHC*PPPGRW
Trigger: CCACCTCCCAGGCGGTGGCCAGCAGTGGCTCCATGC...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCCAGTGCTGGTGGAGCTaGCGACGACCTGGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACQCWWS*RRPGCR
Trigger: CCGGCAGCCAGGTCGTCGCCAGCTCCACCAGCACTG...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGCTGGCGAGGCACGGGTaGTGTGAGAGTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGLARHG*CESKTG
Trigger: GCCAGTCTTACTCTCACACCACCCGTGCCTCGCCAG...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAACTTGGAGTTGCCCCTaGTGCCCAGACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGETWSCP*CPDGGF
Trigger: GAACCCGCCGTCTGGGCACCAGGGGCAACTCCAAGT...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGATGGCCATGTGCTGCTaGTCCTCCATCAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGMAMCC*SSISRS
Trigger: GCTGCGGCTGATGGAGGACCAGCAGCACATGGCCAT...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAAGAGGAGCACCAGGATaGCTTTGGGCAGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTRGAPG*LWAVAS
Trigger: AGAAGCGACTGCCCAAAGCCATCCTGGTGCTCCTCT...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGTCTCGCCCTTGGCCTaGGCTACGCGGTGCTCGATC +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGVSPLA*ATRCSI
Trigger: GATCGAGCACCGCGTAGCCCAGGCCAAGGGCGAGAC...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACGGCCAAGGGCTTAGCTaGAGGGCAGCGCCTGCACGA +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHGQGLS*RAAPAR
Trigger: TCGTGCAGGCGCTGCCCTCCAGCTAAGCCCTTGGCC...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGGGAGGGCCCAGCGCTaGAGAAGATGCGACACCCAC +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIGRAQR*RRCDTH
Trigger: GTGGGTGTCGCATCTTCTCCAGCGCTGGGCCCTCCC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTCTGCTCTTTGGAAGCTaGAGGCCGTGCCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLILLFGS*RPCPLP
Trigger: CGGCAGGGGGCACGGCCTCCAGCTTCCAAAGAGCAG...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGACTGCTCTTTGGAAGCTaGAGGCCGTGCCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGLLFGS*RPCPLP
Trigger: CGGCAGGGGGCACGGCCTCCAGCTTCCAAAGAGCAG...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATCAGCCGCAGCAGGGGTaGGCTGGCCTTGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHQPQQG*AGLDAQ
Trigger: CTGCGCATCAAGGCCAGCTCACCCCTGCTGCGGCTG...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGACTGCAGGTTCACCATaGCGTCGACAATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPTAGSP*RRQWPH
Trigger: GTGAGGCCATTGTCGACGTCATGGTGAACCTGCAGT...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAAAGCCACAGAAGCTTTaGGGGACCCTGGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGEKPQKL*GTLAWR
Trigger: CCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTT...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACAGCTCCGTCACGTACTaGTTCTGGCCACCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHSSVTY*FWPPGG
Trigger: GCCACCGGGTGGCCAGAAGCAGTACGTGACGGAGCT...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGGTGCACCGGTTGGCTaGGAGGGTGCGGGTACAGCC +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHGAPVG*EGAGTA
Trigger: GGCTGTACCCGCACCCTCGCAGCCAACCGGTGCACC...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTGATGTACTGCTGGGGTaGAGGCGAAGGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRDVLLG*RRRGGC
Trigger: GCACCCACCCCTTCGCCTGCACCCCAGCAGTACATC...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGTGACCACGATGTACTaGTGGGGTGCAGGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGEVTTMY*WGAGEG
Trigger: CCCTTCGCCTGCACCCCAGCAGTACATCGTGGTCAC...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGGCAGCCGCTGCTGGGTaGCCTGCACCTGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQAAAAG*PAPAEP
Trigger: TGGTTCAGCAGGTGCAGGGCACCCAGCAGCGGCTGC...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCTGCACCACCAGACGCTaGGTGGGAAGAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCCTTRR*VGRACW
Trigger: CCAGCAGGCTCTTCCCACGCAGCGTCTGGTGGTGCA...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTTTTGCTGCCTGGGGCTaGGCTCTGCACCACCAGACG +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIFAAWG*ALHHQT
Trigger: CGTCTGGTGGTGCAGAGCGCAGCCCCAGGCAGCAAA...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGATTTGCTGCCTGGGGCTaGGCTCTGCACCACCAGACG +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGFAAWG*ALHHQT
Trigger: CGTCTGGTGGTGCAGAGCGCAGCCCCAGGCAGCAAA...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTAGACCTGGCCACCTTTaGTGCCTGGGGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIRPGHL*CLGLRS
Trigger: AGAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCT...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTACTGGCTGGAGGCCCTaGACGGTCAGCGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPTGWRP*TVSGCT
Trigger: GGTGCAGCCGCTGACCGTGCAGGGCCTCCAGCCAGT...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGTGGGACGGGCACCTaGTGGAGCTGCTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHCGTGT*WSCCTS
Trigger: AGAGGTGCAGCAGCTCCAGCAGGTGCCCGTCCCACA...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGCGGGATAGGAGTAGGTaGTGGAACGGATGGCACTGG +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGRDRSR*WNGWHW
Trigger: CCAGTGCCATCCGTTCCAGCACCTACTCCTATCCCG...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTCACCTCCGCTGCTGTTaGTGGCCCCAGCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPHLRCC*WPQPQC
Trigger: GCACTGGGGCTGGGGCCAGCAACAGCAGCGGAGGTG...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTTGCCACCACCTCCGCTaGTGTTGCTGGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPCHHLR*CCWPQP
Trigger: GGGCTGGGGCCAGCAACAGCAGCGGAGGTGGTGGCA...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGAAGACTGGCTGGCACTaGCCAGCATGTAGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWKTGWH*PACSRL
Trigger: AAGGCGGCTACATGCTGGGCAGTGCCAGCCAGTCTT...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAAGTGGTACTTGGAGTTaGCCCTGGTGCCCAGACGGC +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGESGTWS*PWCPDG
Trigger: GCCGTCTGGGCACCAGGGGCAACTCCAAGTACCACT...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCCTCAGGCAGCACCTTaGCCTGGAGGTCGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCPQAAP*PGGRAL
Trigger: CAGAGCTCGACCTCCAGGGCAAGGTGCTGCCTGAGG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCATCTGTGCGGTGTTCTaGAGCACAGCGCGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACICAVF*STARAA
Trigger: GGCGGCGCGCGCTGTGCTGCAGAACACCGCACAGAT...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGTCAGAGTTTGCAGCTaGGGCTCCGCCCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGVRVCS*GSAQPT
Trigger: AGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGAC...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGGGCTCCGCGGCTCGCTaGTCTTTGGAAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQGSAAR*SLEAGG
Trigger: GCCTCCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCC...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGGGCGACACGTGGCCTaGCTTGGCCTGCACGCTCGT +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHGRHVA*LGLHAR
Trigger: ACGAGCGTGCAGGCCAAGCCAGGCCACGTGTCGCCC...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAATGGAACGGATGGCACTaGCCGTGTAGCTGGCATCGC +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGEWNGWH*PCSWHR
Trigger: GCGATGCCAGCTACACGGCCAGTGCCATCCGTTCCA...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGCATGGAGCCACTGCTaGCCACCGCCTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHAWSHC*PPPGRW
Trigger: CCACCTCCCAGGCGGTGGCCAGCAGTGGCTCCATGC...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAACACGTACATGGGCATaGAGCCACTGCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGETRTWA*SHCWPP
Trigger: CGGTGGCCAGCAGTGGCTCCATGCCCATGTACGTGT...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGAGAGTAAGACTGGCTaGCACTGCCCAGCATGTAGC +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPESKTG*HCPACS
Trigger: GCTACATGCTGGGCAGTGCCAGCCAGTCTTACTCTC...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTACTTGGAGTTGCCCCTaGTGCCCAGACGGCGGGTTC +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRTWSCP*CPDGGF
Trigger: GAACCCGCCGTCTGGGCACCAGGGGCAACTCCAAGT...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTTCTGCGAGAAGGGCTaGCCCCGCATGGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHFCEKG*PRMAMC
Trigger: GCACATGGCCATGCGGGGCCAGCCCTTCTCGCAGAA...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGCCACCGCCACGCCGTTaGTCATGCCTTCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWPPPRR*SCLPSS
Trigger: AGAAGATGGAAGGCATGACCAACGGCGTGGCGGTGG...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGTCCCGGTACAGGACCTaGAAGGCTTTGATGTCCCCG +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGSRYRT*KALMSP
Trigger: CGGGGACATCAAAGCCTTCCAGGTCCTGTACCGGGA...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTGGCGCCTCACTGGGCTaGCTGAGGTTGTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRGASLG*LRLYLQ
Trigger: CTGGAGGTACAACCTCAGCCAGCCCAGTGAGGCGCC...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTCAAGGCACTGGGGATaGGCCGCAGCACGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHSRHWG*AAARRE
Trigger: TTCCCGACGTGCTGCGGCCCATCCCCAGTGCCTTGA...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCTTGGGTCAAGGCACTaGGGATGGGCCGCAGCACGT +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCLGSRH*GWAAAR
Trigger: ACGTGCTGCGGCCCATCCCCAGTGCCTTGACCCAAG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCGGCTCGCTGCTCTTTaGAAGCTGGAGGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQRLAAL*KLEAVP
Trigger: GGGCACGGCCTCCAGCTTCCAAAGAGCAGCGAGCCG...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGAGGTGGCGGGGGTGCTaGCCTGGGTGGCCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGRWRGC*PGWPCL
Trigger: CAGGCACGGCCACCCAGGTCAGCACCCCCGCCACCT...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTAAGCCACAGAAGCTTTaGGGGACCCTGGCGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIKPQKL*GTLAWR
Trigger: CCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTT...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGGGGCTGGGGGCTCTaGAGCTCGGTGACATATTGG +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHWGWGL*SSVTYW
Trigger: CCAATATGTCACCGAGCTGCAGAGCCCCCAGCCCCA...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCGATGTACTGCTGGGGTaGAGGCGAAGGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACDVLLG*RRRGGC
Trigger: GCACCCACCCCTTCGCCTGCACCCCAGCAGTACATC...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGCAGCCGCTGCTGGGTaGCCTGCACCTGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHAAAAG*PAPAEP
Trigger: TGGTTCAGCAGGTGCAGGGCACCCAGCAGCGGCTGC...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGGGGGCGAGTGCACCTaGTGGGTACCATGGACCGTC +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPGGECT*WVPWTV
Trigger: GACGGTCCATGGTACCCAGCAGGTGCACTCGCCCCC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCTGCTCTGGGGGCGAGTaGACCTGCTGGGTACCATGG +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACCSGGE*TCWVPW
Trigger: CCATGGTACCCAGCAGGTGCACTCGCCCCCAGAGCA...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATCTGGGTGGCCGTGCCTaGGGCCTCGTAGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHLGGRA*GLVVAG
Trigger: ACCAGCTACTACGAGGCCGCAGGCACGGCCACCCAG...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGTTTTGTGTCAGAGTTTaGAGCTGCGGCTCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGFCVRV*SCGSAQ
Trigger: CTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAA...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGGCTCCGCGGCTCGCTaGTCTTTGGAAGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHGSAAR*SLEAGG
Trigger: GCCTCCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCC...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTTCTCGGAGTCGATGTTaGGAAGGGGACGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLISRSRC*EGDGTC
Trigger: GCACGTCCCGTCCCCTTCCCAACATCGACTCCGAGA...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTACCACGATGTACTGCTaGGGTGCAGGCGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLITTMYC*GAGEGV
Trigger: CACCCCTTCGCCTGCACCCCAGCAGTACATCGTGGT...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGGGGCACTTGGATGTTaGTCAGCTGGAGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIGALGC*SAGGAT
Trigger: TGTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCACCGTCAGGGAGACCTaGCCACCTTTGCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACTVRET*PPLLPG
Trigger: CCCAGGCAGCAAAGGTGGCCAGGTCTCCCTGACGGT...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACACCTGCTGGGTACCATaGACCGTCAGGGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHTCWVP*TVRETW
Trigger: CCAGGTCTCCCTGACGGTCCATGGTACCCAGCAGGT...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATACGGGGACACTCTGCTaGACGCCGTGGACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHTGTLC*TPWTCS
Trigger: GCTGCAGGTCCACGGCGTCCAGCAGAGTGTCCCCGT...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCGGGTTTGGGCGCTTGTaGAGTGGCCTGGACCACAGA +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCGFGRL*SGLDHR
Trigger: TCTGTGGTCCAGGCCACTCCACAAGCGCCCAAACCC...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGGTGCTGGAACGGATaGCACTGGCCGTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCRCWNG*HWPCSW
Trigger: CCAGCTACACGGCCAGTGCCATCCGTTCCAGCACCT...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACCGGCCTCGTAGTAGCTaGTGCTTGCCGTCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHRPRSS*CLPSAC
Trigger: ACACGCAGACGGCAAGCACCAGCTACTACGAGGCCG...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCACACGTACATGGGCATaGAGCCACTGCTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCTRTWA*SHCWPP
Trigger: CGGTGGCCAGCAGTGGCTCCATGCCCATGTACGTGT...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGCCGGACACGTACATaGGCATGGAGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHCRTRT*AWSHCW
Trigger: CCAGCAGTGGCTCCATGCCCATGTACGTGTCCGGCA...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCTGGCGAGGCACGGGTaGTGTGAGAGTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCLARHG*CESKTG
Trigger: GCCAGTCTTACTCTCACACCACCCGTGCCTCGCCAG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCTTGTCCAGGAGCCACTaGACCGTGGCTGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACLSRSH*TVAGEA
Trigger: TGCCTCGCCAGCCACGGTCCAGTGGCTCCTGGACAA...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCACCAGGATGGCTTTaGGCAGTCGCTTCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGAPGWL*AVASRP
Trigger: AGGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGC...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGCACCAGGATGGCTTTaGGCAGTCGCTTCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIAPGWL*AVASRP
Trigger: AGGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGAGAGGAGCACCAGGATaGCTTTGGGCAGTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: WSSDHEATEALRDPGVEGRGAPG*LWAVAS
Trigger: AGAAGCGACTGCCCAAAGCCATCCTGGTGCTCCTCT...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTGCACGGGCTCGAACTTaGAGAGGAGCACCAGGATGG +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRARART*RGAPGW
Trigger: CCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGC...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGATTTCCACCAGGCCCTaGTACAGCACGTTGTCACAG +
Preference number: 4 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPISTRP*YSTLSQ
Trigger: CTGTGACAACGTGCTGTACCAGGGCCTGGTGGAAAT...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTGCCTGCCTGCCCCCTaGGGTGGTGGGAGGACGGGG +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGCLPAP*GGGRTG
Trigger: CCCCGTCCTCCCACCACCCCAGGGGGCAGGCAGGCA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTCGGCTCGCTGCTCTTTaGAAGCTGGAGGCCGTGCCC +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPRLAAL*KLEAVP
Trigger: GGGCACGGCCTCCAGCTTCCAAAGAGCAGCGAGCCG...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTACAATAGTCATGGGGTaGGGGTCGCACGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRTIVMG*GSHGTE
Trigger: CTCCGTGCCGTGCGACCCCCACCCCATGACTATTGT...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGTGACATATTGGGGCTaGGGGGTGGCAGCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPVTYWG*GVAAAV
Trigger: CACCGCTGCTGCCACCCCTCAGCCCCAATATGTCAC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGGCTCTGCAGCTCGGTaGCATATTGGGGCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPGSAAR*HIGAEG
Trigger: CCCCTCAGCCCCAATATGTCACCGAGCTGCAGAGCC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGACAGATCTCTCTTGGGTaGCGGGGACACTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGQISLG*RGHSAG
Trigger: TCCAGCAGAGTGTCCCCGTCACCCAAGAGAGATCTG...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCCCTCACTGGGCTGGCTaGGGTTGTACCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACPHWAG*GCTSRR
Trigger: CCTTCTGGAGGTACAACCTCAGCCAGCCCAGTGAGG...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGTTGTTGACTCGCGTTaGCGGGTTGCTTGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIVVDSR*RVAWSP
Trigger: TGGCGACCAAGCAACCCGGCAACGCGAGTCAACAAC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGAGTATACGCCTGTGTTaGCATGCCAACGGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWSIRLC*HANGGE
Trigger: TTCCCCACCGTTGGCATGGCAACACAGGCGTATACT...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATTGCACCACCAGACGCTaGGTGGGAAGAGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHCTTRR*VGRACW
Trigger: CCAGCAGGCTCTTCCCACGCAGCGTCTGGTGGTGCA...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATAGACCTGGCCACCTTTaGTGCCTGGGGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHRPGHL*CLGLRS
Trigger: AGAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCT...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGAAGAGCTGTTGGCCTaGACCGGCGACTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPEELLA*TGDCSG
Trigger: CCCAGAGCAGTCGCCGGTGCAGGCCAACAGCTCTTC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCGGGATAGGAGTAGGTaGTGGAACGGATGGCACTGG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCRDRSR*WNGWHW
Trigger: CCAGTGCCATCCGTTCCAGCACCTACTCCTATCCCG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTAAGACTGGCTGGCACTaGCCAGCATGTAGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIKTGWH*PACSRL
Trigger: AAGGCGGCTACATGCTGGGCAGTGCCAGCCAGTCTT...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTCGCATGGCCATGTGCTaGTGGTCCTCCATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPRMAMC*WSSISR
Trigger: GCGGCTGATGGAGGACCAGCAGCACATGGCCATGCG...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCATGGGCTTGAGCCTCTaGTTCTGCGAGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCMGLSL*FCEKGW
Trigger: CCAGCCCTTCTCGCAGAAGCAGAGGCTCAAGCCCAT...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAAATTGCTGGTACTGCTaGACCTGGGCGCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGENCWYC*TWALMS
Trigger: GGACATCAGCGCCCAGGTGCAGCAGTACCAGCAATT...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAAGCGAGTTCTGCTGCTaGAGCGTCACCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGESEFCC*SVTLKS
Trigger: GGACTTCAAGGTGACGCTGCAGCAGCAGAACTCGCT...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCGACTACCGTGGCTATaGCGCCTCCGTTTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQRLPWL*RLRFPH
Trigger: GTGAGGGAAACGGAGGCGCCATAGCCACGGTAGTCG...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGCGGTGGAGCCGGGGCTaGCCTCCGACACTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGRWSRG*PPTLSR
Trigger: GCGAGACAGTGTCGGAGGCCAGCCCCGGCTCCACCG...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGTGGGAAGAGCCTGCTaGGGCACTTGGATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGVGRAC*GTWMLV
Trigger: GACCAACATCCAAGTGCCCCAGCAGGCTCTTCCCAC...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGACCTGCTGGGTACCATaGACCGTCAGGGAGACCTGG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQTCWVP*TVRETW
Trigger: CCAGGTCTCCCTGACGGTCCATGGTACCCAGCAGGT...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGGCGAGTGCACCTGCTaGGTACCATGGACCGTCAGG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPGECTC*VPWTVR
Trigger: CCTGACGGTCCATGGTACCCAGCAGGTGCACTCGCC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCGGGTTTGGGCGCTTGTaGAGTGGCCTGGACCACAGA +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACGFGRL*SGLDHR
Trigger: TCTGTGGTCCAGGCCACTCCACAAGCGCCCAAACCC...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATTTGAGCCACGTGGACTaGCTGGAGGCCCTGCACGGT +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHLSHVD*LEALHG
Trigger: ACCGTGCAGGGCCTCCAGCCAGTCCACGTGGCTCAA...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAATCCACATACTGCACCTaGCTGGAGTACACGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGESTYCT*LEYTCG
Trigger: CCCACACGTGTACTCCAGCCAGGTGCAGTATGTGGA...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATCACTGGCCGTGTAGCTaGCATCGCCGCCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHHWPCS*HRRPPH
Trigger: ATGTGGAGGGCGGCGATGCCAGCTACACGGCCAGTG...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCTGGAACGGATGGCACTaGCCGTGTAGCTGGCATCGC +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACWNGWH*PCSWHR
Trigger: GCGATGCCAGCTACACGGCCAGTGCCATCCGTTCCA...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGATAGGAGTAGGTGCTaGAACGGATGGCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIDRSRC*NGWHWP
Trigger: CGGCCAGTGCCATCCGTTCCAGCACCTACTCCTATC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTTTGTCCAGGAGCCACTaGACCGTGGCTGGCGAGGCA +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPLSRSH*TVAGEA
Trigger: TGCCTCGCCAGCCACGGTCCAGTGGCTCCTGGACAA...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCCCACCGCCACGCCGTTaGTCATGCCTTCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCPPPRR*SCLPSS
Trigger: AGAAGATGGAAGGCATGACCAACGGCGTGGCGGTGG...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGGCGCCTCACTGGGCTaGCTGAGGTTGTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPGASLG*LRLYLQ
Trigger: CTGGAGGTACAACCTCAGCCAGCCCAGTGAGGCGCC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAACAGTGCTTGGTCCATTaGAGCACGGGCTCGAACTTG +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGEQCLVH*STGSNL
Trigger: CAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTG...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAACGTTGTCACAGTGCTTaGTCCATTGGAGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: AHESHNSHGVGVARHGGERCHSA*SIGARA
Trigger: AGCCCGTGCTCCAATGGACCAAGCACTGTGACAACG...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATTCAAGGCACTGGGGATaGGCCGCAGCACGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHSRHWG*AAARRE
Trigger: TTCCCGACGTGCTGCGGCCCATCCCCAGTGCCTTGA...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGAGGTCGCTCAGCATCTaGTTGATCTGTGCGGTGTTC +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWRSLSI*LICAVF
Trigger: GAACACCGCACAGATCAACCAGATGCTGAGCGACCT...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGGGGGTTCAGGGAGGTaGCCAGATTGGCGAACTCGC +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPGGSGR*PDWRTR
Trigger: GCGAGTTCGCCAATCTGGCCACCTCCCTGAACCCCC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGGTGGGAGGACGGGGCTaGGGAGAAGACGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGVGGRG*GEDAGA
Trigger: GGCCCCAGCGTCTTCTCCCCAGCCCCGTCCTCCCAC...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGCAGCCGCAGCAGGGGTaGGCTGGCCTTGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGQPQQG*AGLDAQ
Trigger: CTGCGCATCAAGGCCAGCTCACCCCTGCTGCGGCTG...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCACTGCAGGTTCACCATaGCGTCGACAATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCTAGSP*RRQWPH
Trigger: GTGAGGCCATTGTCGACGTCATGGTGAACCTGCAGT...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCAGCACGTCGGGAATaGGGATTTCCACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPAARRE*GFPPGP
Trigger: AGGGCCTGGTGGAAATCCTCATTCCCGACGTGCTGC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTTGTAGAAGGACCACTTaGGGAGGAAGAGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLICRRTT*GGRAWR
Trigger: CCGCCAAGCTCTTCCTCCTCAAGTGGTCCTTCTACA...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTCTGAGGCTGGAGCAGTaGCCACGAAGCCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPLRLEQ*PRSHRS
Trigger: GCTTCTGTGGCTTCGTGGTCACTGCTCCAGCCTCAG...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACCTCCCCACTTCTGTCTaGGGAAACGCTTTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHLPTSV*GNAFRR
Trigger: CCTCCGAAAAGCGTTTCCGCAGACAGAAGTGGGGAG...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGACTGGCTGGAGGCCCTaGACGGTCAGCGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGTGWRP*TVSGCT
Trigger: GGTGCAGCCGCTGACCGTGCAGGGCCTCCAGCCAGT...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTCCGCCCTCCACATACTaGACCTGGCTGGAGTACACG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPPPSTY*TWLEYT
Trigger: CGTGTACTCCAGCCAGGTGCAGTATGTGGAGGGCGG...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACCCTCGTAGTAGCTGGTaGTTGCCGTCTGCGTGTACA +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHPRSSW*LPSACT
Trigger: TGTACACGCAGACGGCAAGCACCAGCTACTACGAGG...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTGGCCCCAGCCCCAGTaGTGGTGGAGCTGGCGACGA +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGWPQPQ*WWSWRR
Trigger: TCGTCGCCAGCTCCACCAGCACTGGGGCTGGGGCCA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGATGGGCTTGAGCCTCTaGTTCTGCGAGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQMGLSL*FCEKGW
Trigger: CCAGCCCTTCTCGCAGAAGCAGAGGCTCAAGCCCAT...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACCCACGCCGTTGGTCATaGCTTCCATCTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHPRRWS*LPSSGW
Trigger: CCATCCAGAAGATGGAAGGCATGACCAACGGCGTGG...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGGAGGCATCCAAAAATTaGTGGTACTGCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWEASKN*WYCCTW
Trigger: CCAGGTGCAGCAGTACCAGCAATTTTTGGATGCCTC...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTTCCACCAGGGTGAACTaGAGGTTCACCATGACGTCG +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRSTRVN*RFTMTS
Trigger: CGACGTCATGGTGAACCTGCAGTTCACCCTGGTGGA...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCTCCAGCGAGTTCTGCTaGTGCAGCGTCACCTTGAAG +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCSSEFC*CSVTLK
Trigger: CTTCAAGGTGACGCTGCAGCAGCAGAACTCGCTGGA...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGTGCTCCAGCGAGTTCTaGTGCTGCAGCGTCACCTTG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQCSSEF*CCSVTL
Trigger: CAAGGTGACGCTGCAGCAGCAGAACTCGCTGGAGCA...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGGGTGGGTGCACCGGTTaGCTGCGAGGGTGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGGGCTG*LRGCGY
Trigger: GTACCCGCACCCTCGCAGCCAACCGGTGCACCCACC...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGGTGCAGGCGAAGGGGTaGGTGCACCGGTTGGCTGCG +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGVQAKG*VHRLAA
Trigger: CGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCAC...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATACCACGATGTACTGCTaGGGTGCAGGCGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHTTMYC*GAGEGV
Trigger: CACCCCTTCGCCTGCACCCCAGCAGTACATCGTGGT...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTGGAGGGGCGACACGTaGCCTGGCTTGGCCTGCACG +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGWRGDT*PGLACT
Trigger: CGTGCAGGCCAAGCCAGGCCACGTGTCGCCCCTCCA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGTGGGCGCTTGTGGAGTaGCCTGGACCACAGATCTCT +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQWALVE*PGPQIS
Trigger: AGAGATCTGTGGTCCAGGCCACTCCACAAGCGCCCA...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCATACTGCACCTGGCTaGAGTACACGTGTGGGACGG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQHTAPG*STRVGR
Trigger: CCGTCCCACACGTGTACTCCAGCCAGGTGCAGTATG...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCGAGAGTAAGACTGGCTaGCACTGCCCAGCATGTAGC +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCESKTG*HCPACS
Trigger: GCTACATGCTGGGCAGTGCCAGCCAGTCTTACTCTC...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGGCAGCACCTTGCCCTaGAGGTCGAGCTCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHGSTLP*RSSSVK
Trigger: CTTCACAGAGCTCGACCTCCAGGGCAAGGTGCTGCC...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGTCCCGGTACAGGACCTaGAAGGCTTTGATGTCCCCG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQSRYRT*KALMSP
Trigger: CGGGGACATCAAAGCCTTCCAGGTCCTGTACCGGGA...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGACAGTGCTTGGTCCATTaGAGCACGGGCTCGAACTTG +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGQCLVH*STGSNL
Trigger: CAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTG...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTCGTTGTCACAGTGCTTaGTCCATTGGAGCACGGGCT +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRRCHSA*SIGARA
Trigger: AGCCCGTGCTCCAATGGACCAAGCACTGTGACAACG...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGGTCCCGGATCACCATaGAGCTGTAGAAGGACCACT +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGGPGSP*SCRRTT
Trigger: AGTGGTCCTTCTACAGCTCCATGGTGATCCGGGACC...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATACAATAGTCATGGGGTaGGGGTCGCACGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHTIVMG*GSHGTE
Trigger: CTCCGTGCCGTGCGACCCCCACCCCATGACTATTGT...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTCCCCACTTCTGTCTaGGGAAACGCTTTTCGGAGG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQLPTSV*GNAFRR
Trigger: CCTCCGAAAAGCGTTTCCGCAGACAGAAGTGGGGAG...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGTAGTAGCTGGTGCTTaGCGTCTGCGTGTACAGCGG +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHVVAGA*RLRVQR
Trigger: CCGCTGTACACGCAGACGGCAAGCACCAGCTACTAC...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTACGGGCTCCAGCTTCTaGTCCTGGCAGTGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPTGSSF*SWQCSK
Trigger: CTTACTGCACTGCCAGGAGCAGAAGCTGGAGCCCGT...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCCACGCCGTTGGTCATaGCTTCCATCTTCTGGATGG +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQPRRWS*LPSSGW
Trigger: CCATCCAGAAGATGGAAGGCATGACCAACGGCGTGG...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTAGCACGTTGTCACAGTaGTTGGTCCATTGGAGCACG +
Preference number: 4 (lower is better)
Translates to: TLDYHTCGHFHHREREPRSTLSQ*LVHWST
Trigger: CGTGCTCCAATGGACCAAGCACTGTGACAACGTGCT...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCAGCGAGTTCTGCTGCTaGAGCGTCACCTTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACSEFCC*SVTLKS
Trigger: GGACTTCAAGGTGACGCTGCAGCAGCAGAACTCGCT...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCCAGGACAGGCTGTaGAAAGCCAGCGAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPAQDRL*KASELN
Trigger: ATTCAGCTCGCTGGCTTTGCACAGCCTGTCCTGGGC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGCTCTGCTGGACGCCGTaGACCTGCAGCTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGLCWTP*TCSCCG
Trigger: GCCACAGCAGCTGCAGGTCCACGGCGTCCAGCAGAG...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGACCACAGATCTCTCTTaGGTGACGGGGACACTCTGC +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQTTDLS*VTGTLC
Trigger: GCAGAGTGTCCCCGTCACCCAAGAGAGATCTGTGGT...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACATGCCTTCCATCTTCTaGATGGGCTTGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHMPSIF*MGLSLC
Trigger: GCAGAGGCTCAAGCCCATCCAGAAGATGGAAGGCAT...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTCTCCAGGCTCTTaGCAAAGTTCCGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCSSPGS*QSSGSL
Trigger: AAGCGATCCGGAACTTTGCCAAGAGCCTGGAGAGCT...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATATGTTGACCATGGCGTaGGTGAGCCAGCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHMLTMA*VSQLSR
Trigger: CCTGGAGAGCTGGCTCACCCACGCCATGGTCAACAT...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGGGGAGGGCCCAGCGCTaGAGAAGATGCGACACCCAC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGGRAQR*RRCDTH
Trigger: GTGGGTGTCGCATCTTCTCCAGCGCTGGGCCCTCCC...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAAGACTACCACACGTGTaGACACTTTCACCACCGGGA +
Preference number: 4 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGRLPHV*TLSPPG
Trigger: TCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCT...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTCACCTTCAGAGACAGTaGCCACGATGTACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPHLQRQ*PRCTAG
Trigger: CCCAGCAGTACATCGTGGTCACTGTCTCTGAAGGTG...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTGTGGGACGGGCACCTaGTGGAGCTGCTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGCGTGT*WSCCTS
Trigger: AGAGGTGCAGCAGCTCCAGCAGGTGCCCGTCCCACA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTGGCGACGACCTGGCTaGCGGACACGTACATGGGCA +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGWRRPG*RTRTWA
Trigger: TGCCCATGTACGTGTCCGGCAGCCAGGTCGTCGCCA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACAAAAATTGCTGGTACTaGTGCACCTGGGCGCTGATG +
Preference number: 4 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHKNCWY*CTWALM
Trigger: CATCAGCGCCCAGGTGCAGCAGTACCAGCAATTTTT...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTTCCACCAGGGTGAACTaGAGGTTCACCATGACGTCG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPSTRVN*RFTMTS
Trigger: CGACGTCATGGTGAACCTGCAGTTCACCCTGGTGGA...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCAGCGCTGGAGAAGATaGGACACCCACGGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQQRWRR*DTHGFN
Trigger: ATTAAAGCCGTGGGTGTCGCATCTTCTCCAGCGCTG...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGCGTTGCCGGGTTGCTTaGTCGCCACGACTACCGTGG +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGRCRVA*SPRLPW
Trigger: CCACGGTAGTCGTGGCGACCAAGCAACCCGGCAACG...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTTCTGCGAGAAGGGCTaGCCCCGCATGGCCATGTGC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGFCEKG*PRMAMC
Trigger: GCACATGGCCATGCGGGGCCAGCCCTTCTCGCAGAA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGATGCCTTCCATCTTCTaGATGGGCTTGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TWARGGFLKARLLCQSLQMPSIF*MGLSLC
Trigger: GCAGAGGCTCAAGCCCATCCAGAAGATGGAAGGCAT...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTAAGTTCCGGATCGCTTaGGTCAAGGCACTGGGGATG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPKFRIA*VKALGM
Trigger: CATCCCCAGTGCCTTGACCCAAGCGATCCGGAACTT...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCAGCTCTCCAGGCTCTTaGCAAAGTTCCGGATCGCTT +
Preference number: 4 (lower is better)
Translates to: KASELNKLTVSHGRGPACSSPGS*QSSGSL
Trigger: AAGCGATCCGGAACTTTGCCAAGAGCCTGGAGAGCT...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGGGCGGTTGTTGTTGTTaGCTCGCGTTGCCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGGGCCC*LALPGC
Trigger: GCAACCCGGCAACGCGAGTCAACAACAACAACCGCC...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR TCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGGCAGCACGTCGGGAATaGGGATTTCCACCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGAARRE*GFPPGP
Trigger: AGGGCCTGGTGGAAATCCTCATTCCCGACGTGCTGC...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTGGGGCTGGGGGCTCTaGAGCTCGGTGACATATTGG +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGWGWGL*SSVTYW
Trigger: CCAATATGTCACCGAGCTGCAGAGCCCCCAGCCCCA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGAGTGGTACTTGGAGTTaGCCCTGGTGCCCAGACGGC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGSGTWS*PWCPDG
Trigger: GCCGTCTGGGCACCAGGGGCAACTCCAAGTACCACT...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATAGCACGTTGTCACAGTaGTTGGTCCATTGGAGCACG +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHSTLSQ*LVHWST
Trigger: CGTGCTCCAATGGACCAAGCACTGTGACAACGTGCT...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATCAGCGCTGGAGAAGATaGGACACCCACGGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHQRWRR*DTHGFN
Trigger: ATTAAAGCCGTGGGTGTCGCATCTTCTCCAGCGCTG...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTCTCGGAGTCGATGTTaGGAAGGGGACGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGSRSRC*EGDGTC
Trigger: GCACGTCCCGTCCCCTTCCCAACATCGACTCCGAGA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGATGGCCATGTGCTGCTaGTCCTCCATCAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGMAMCC*SSISRS
Trigger: GCTGCGGCTGATGGAGGACCAGCAGCACATGGCCAT...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTGGTACTGCTGCACCTaGGCGCTGATGTCCGACAGC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGWYCCT*ALMSDS
Trigger: GCTGTCGGACATCAGCGCCCAGGTGCAGCAGTACCA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGCATCCAAAAATTGCTaGTACTGCTGCACCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHASKNC*YCCTWA
Trigger: CGCCCAGGTGCAGCAGTACCAGCAATTTTTGGATGC...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR GCA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTAAAAATTGCTGGTACTaGTGCACCTGGGCGCTGATG +
Preference number: 4 (lower is better)
Translates to: LCKASELNKLTVSHGRGPKNCWY*CTWALM
Trigger: CATCAGCGCCCAGGTGCAGCAGTACCAGCAATTTTT...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGGATAGGAGTAGGTGCTaGAACGGATGGCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGDRSRC*NGWHWP
Trigger: CGGCCAGTGCCATCCGTTCCAGCACCTACTCCTATC...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTCCACATACTGCACCTaGCTGGAGTACACGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGSTYCT*LEYTCG
Trigger: CCCACACGTGTACTCCAGCCAGGTGCAGTATGTGGA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGAGGTCGCTCAGCATCTaGTTGATCTGTGCGGTGTTC +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGRSLSI*LICAVF
Trigger: GAACACCGCACAGATCAACCAGATGCTGAGCGACCT...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CCA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGAGACTACCACACGTGTaGACACTTTCACCACCGGGA +
Preference number: 4 (lower is better)
Translates to: AGEDATPTALIALNTKKGRLPHV*TLSPPG
Trigger: TCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCT...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 90 bp CGCCTTGGATCACGTAGGTGCCTGCTCCGCTGCCGCCGCCTCCGGTaGTGCCACTGCCACCCCCGCCACCGCCTCCCCCGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: RLGSRRCLLRCRRLR*CHCHPRHRLPRRRR
Trigger: GCGGCGGCGGCGGGGGAGGCGGTGGCGGGGGTGGCAGTGGCAGCACCGGAGGCGGCGGCAGCGGAGCAGGCACCTACGTGATCCAAGGCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 90 bp CTTGGATCACGTAGGTGCCTGCTCCGCTGCCGCCGCCTCCGGTGCTaGCACTGCCACCCCCGCCACCGCCTCCCCCGCCGCCGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: LGSRRCLLRCRRLRC*HCHPRHRLPRRRRH
Trigger: GTGGCGGCGGCGGCGGGGGAGGCGGTGGCGGGGGTGGCAGTGGCAGCACCGGAGGCGGCGGCAGCGGAGCAGGCACCTACGTGATCCAAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp GCAGCGCCTGCACGAAGAGGCCGCGCGCGTCAGTCCGCGCCAGCTTaGCCGGCGGCTCCAGGGTCTCCGGGCCCAGCGCGGGTGACTCGC +
Preference number: 5 (lower is better)
Translates to: AAPARRGRARQSAPA*PAAPGSPGPARVTR
Trigger: GCGAGTCACCCGCGCTGGGCCCGGAGACCCTGGAGCCGCCGGCCAAGCTGGCGCGGACTGACGCGCGCGGCCTCTTCGTGCAGGCGCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 90 bp GCATGGAGCCACTGCTGGCCACCGCCTGGGAGGTGGCGGGGGTGCTaGCCTGGGTGGCCGTGCCTGCGGCCTCGTAGTAGCTGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: AWSHCWPPPGRWRGC*PGWPCLRPRSSWCL
Trigger: CAAGCACCAGCTACTACGAGGCCGCAGGCACGGCCACCCAGGTCAGCACCCCCGCCACCTCCCAGGCGGTGGCCAGCAGTGGCTCCATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp CAGTGCTGGTGGAGCTGGCGACGACCTGGCTGCCGGACACGTACATaGGCATGGAGCCACTGCTGGCCACCGCCTGGGAGGTGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: QCWWSWRRPGCRTRT*AWSHCWPPPGRWRG
Trigger: CCCCCGCCACCTCCCAGGCGGTGGCCAGCAGTGGCTCCATGCCCATGTACGTGTCCGGCAGCCAGGTCGTCGCCAGCTCCACCAGCACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp GAGCGGGGCTGTCGAGGAGCCTCGCAGAGGCCGGCGGGACTGGGCTaGACTGGACTGCCTGAGATGACTCGGAGTGGGGGTGGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: ERGCRGASQRPAGLG*TGLPEMTRSGGGPW
Trigger: CCAAGGCCCACCCCCACTCCGAGTCATCTCAGGCAGTCCAGTCCAGCCCAGTCCCGCCGGCCTCTGCGAGGCTCCTCGACAGCCCCGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589239.5
ENST00000672484.1
CDS-3UTR CAA 90 bp CTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGATGGGGGTCTCGCCCTaGGCCTGGGCTACGCGGTGC +
Preference number: 5 (lower is better)
Translates to: LGSVGTPRLRGSLLFGSWMGVSP*AWATRC
Trigger: GCACCGCGTAGCCCAGGCCAAGGGCGAGACCCCCAT...CCAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 90 bp TGCTGGCCCCAGCCCCAGTGCTGGTGGAGCTGGCGACGACCTGGCTaGCGGACACGTACATGGGCATGGAGCCACTGCTGGCCACCGCCT +
Preference number: 5 (lower is better)
Translates to: CWPQPQCWWSWRRPG*RTRTWAWSHCWPPP
Trigger: AGGCGGTGGCCAGCAGTGGCTCCATGCCCATGTACGTGTCCGGCAGCCAGGTCGTCGCCAGCTCCACCAGCACTGGGGCTGGGGCCAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 90 bp GGGCCCAGCGCGGGTGACTCGCCGCCAGCCGCCAGTGAGATGTCCTaGGGCAGCTCGTCCTCGCTCTCCTCCTCCTCTTCTTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GPSAGDSPPAASEMS*GSSSSLSSSSSSSS
Trigger: CGAGGAGGAAGAAGAGGAGGAGGAGAGCGAGGACGAGCTGCCGCAGGACATCTCACTGGCGGCTGGCGGCGAGTCACCCGCGCTGGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGGGGGCCCCGGCTGTCTaGCTGGAAGAGCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLGAPAV*LEELLA
Trigger: GGCCAACAGCTCTTCCAGCAAGACAGCCGGGGCCCC...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 90 bp TGCACCGGCGACTGCTCTGGGGGCGAGTGCACCTGCTGGGTACCATaGACCGTCAGGGAGACCTGGCCACCTTTGCTGCCTGGGGCTGCG +
Preference number: 5 (lower is better)
Translates to: CTGDCSGGECTCWVP*TVRETWPPLLPGAA
Trigger: CGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCTCCCTGACGGTCCATGGTACCCAGCAGGTGCACTCGCCCCCAGAGCAGTCGCCGGTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp TCTGCTGGACGCCGTGGACCTGCAGCTGCTGTGGCACTGTGCCCGTaGGGGCCCCGGCTGTCTTGCTGGAAGAGCTGTTGGCCTGCACCG +
Preference number: 5 (lower is better)
Translates to: SAGRRGPAAAVALCP*GPRLSCWKSCWPAP
Trigger: CGGTGCAGGCCAACAGCTCTTCCAGCAAGACAGCCGGGGCCCCCACGGGCACAGTGCCACAGCAGCTGCAGGTCCACGGCGTCCAGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp CTGTTGCTGGCCCCAGCCCCAGTGCTGGTGGAGCTGGCGACGACCTaGCTGCCGGACACGTACATGGGCATGGAGCCACTGCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: LLLAPAPVLVELATT*LPDTYMGMEPLLAT
Trigger: GGTGGCCAGCAGTGGCTCCATGCCCATGTACGTGTCCGGCAGCCAGGTCGTCGCCAGCTCCACCAGCACTGGGGCTGGGGCCAGCAACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp CACCTCCGCTGCTGTTGCTGGCCCCAGCCCCAGTGCTGGTGGAGCTaGCGACGACCTGGCTGCCGGACACGTACATGGGCATGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: HLRCCCWPQPQCWWS*RRPGCRTRTWAWSH
Trigger: GTGGCTCCATGCCCATGTACGTGTCCGGCAGCCAGGTCGTCGCCAGCTCCACCAGCACTGGGGCTGGGGCCAGCAACAGCAGCGGAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS-3UTR CAA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTCCCTCAGGCAGCACCTaGCCCTGGAGGTCGAGCTCT +
Preference number: 5 (lower is better)
Translates to: LDAPRGTWARGGFLKARLPSGST*PWRSSS
Trigger: AGAGCTCGACCTCCAGGGCAAGGTGCTGCCTGAGGG...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 90 bp CCTCGCAGAGGCCGGCGGGACTGGGCTGGACTGGACTGCCTGAGATaGCTCGGAGTGGGGGTGGGCCTTGGCATGCCCACCAATTCCCCA +
Preference number: 5 (lower is better)
Translates to: PRRGRRDWAGLDCLR*LGVGVGLGMPTNSP
Trigger: TGGGGAATTGGTGGGCATGCCAAGGCCCACCCCCACTCCGAGTCATCTCAGGCAGTCCAGTCCAGCCCAGTCCCGCCGGCCTCTGCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589239.5
ENST00000672484.1
CDS GCA 90 bp GTGGGGGTGGGGGTCGGCCGGGCGGTTGTTGTTGTTGACTCGCGTTaGCGGGTTGCTTGGTCGCCACGACTACCGTGGCTATGGCGCCTC +
Preference number: 5 (lower is better)
Translates to: VGVGVGRAVVVVDSR*RVAWSPRLPWLWRL
Trigger: GAGGCGCCATAGCCACGGTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAGTCAACAACAACAACCGCCCGGCCGACCCCCACCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 90 bp GACAGTGACCACGATGTACTGCTGGGGTGCAGGCGAAGGGGTGGGTaGACCGGTTGGCTGCGAGGGTGCGGGTACAGCCGGGAGCTCCGT +
Preference number: 5 (lower is better)
Translates to: DSDHDVLLGCRRRGG*TGWLRGCGYSRELR
Trigger: ACGGAGCTCCCGGCTGTACCCGCACCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAGTACATCGTGGTCACTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS GCA 90 bp GGACACTCTGCTGGACGCCGTGGACCTGCAGCTGCTGTGGCACTGTaGCCGTGGGGGCCCCGGCTGTCTTGCTGGAAGAGCTGTTGGCCT +
Preference number: 5 (lower is better)
Translates to: GHSAGRRGPAAAVAL*PWGPRLSCWKSCWP
Trigger: AGGCCAACAGCTCTTCCAGCAAGACAGCCGGGGCCCCCACGGGCACAGTGCCACAGCAGCTGCAGGTCCACGGCGTCCAGCAGAGTGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp CACGATGTACTGCTGGGGTGCAGGCGAAGGGGTGGGTGCACCGGTTaGCTGCGAGGGTGCGGGTACAGCCGGGAGCTCCGTCACGTACTG +
Preference number: 5 (lower is better)
Translates to: HDVLLGCRRRGGCTG*LRGCGYSRELRHVL
Trigger: CAGTACGTGACGGAGCTCCCGGCTGTACCCGCACCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAGTACATCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS CCA 90 bp CGCTGCGTGGGAAGAGCCTGCTGGGGCACTTGGATGTTGGTCAGCTaGAGGGGCGACACGTGGCCTGGCTTGGCCTGCACGCTCGTCTGG +
Preference number: 5 (lower is better)
Translates to: RCVGRACWGTWMLVS*RGDTWPGLACTLVW
Trigger: CCAGACGAGCGTGCAGGCCAAGCCAGGCCACGTGTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGCTCTTCCCACGCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp GCCCTGCACGGTCAGCGGCTGCACCGGGCCGGGTTTGGGCGCTTGTaGAGTGGCCTGGACCACAGATCTCTCTTGGGTGACGGGGACACT +
Preference number: 5 (lower is better)
Translates to: ALHGQRLHRAGFGRL*SGLDHRSLLGDGDT
Trigger: AGTGTCCCCGTCACCCAAGAGAGATCTGTGGTCCAGGCCACTCCACAAGCGCCCAAACCCGGCCCGGTGCAGCCGCTGACCGTGCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS-3UTR CAA 90 bp CTGGATGCCCCGCGGGGCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTGGGTCGGCCGGGCGGTaGTTGTTGTTGACTCGCGTT +
Preference number: 5 (lower is better)
Translates to: LDAPRGTWARGGFLKARLGSAGR*LLLTRV
Trigger: AACGCGAGTCAACAACAACAACCGCCCGGCCGACCC...AAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGCCCCGCGGGGCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGCCACCTCCGCTGCTGTaGCTGGCCCCAGCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPPPPLL*LAPAPV
Trigger: CACTGGGGCTGGGGCCAGCAACAGCAGCGGAGGTGG...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTTGAGGAGGAAGAGCTaGGCGGCCTTGGGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLLRRKS*AALGKP
Trigger: CGGCTTCCCCAAGGCCGCCAAGCTCTTCCTCCTCAA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAGCGGCTCGCTGCTCTTaGGAAGCTGGAGGCCGTGCC +
Preference number: 5 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTAARCS*EAGGRA
Trigger: GGCACGGCCTCCAGCTTCCAAAGAGCAGCGAGCCGC...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 90 bp AGGAGCCTCGCAGAGGCCGGCGGGACTGGGCTGGACTGGACTGCCTaGGATGACTCGGAGTGGGGGTGGGCCTTGGCATGCCCACCAATT +
Preference number: 5 (lower is better)
Translates to: RSLAEAGGTGLDWTA*DDSEWGWALACPPI
Trigger: AATTGGTGGGCATGCCAAGGCCCACCCCCACTCCGAGTCATCTCAGGCAGTCCAGTCCAGCCCAGTCCCGCCGGCCTCTGCGAGGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589239.5
ENST00000672484.1
CDS GCA 90 bp CCGCATGGCACCTTCAGAGACAGTGACCACGATGTACTGCTGGGGTaGAGGCGAAGGGGTGGGTGCACCGGTTGGCTGCGAGGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: PHGTFRDSDHDVLLG*RRRGGCTGWLRGCG
Trigger: CCCGCACCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAGTACATCGTGGTCACTGTCTCTGAAGGTGCCATGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS GCA 90 bp CCTGCTGGGTACCATGGACCGTCAGGGAGACCTGGCCACCTTTGCTaGCTGGGGCTGCGCTCTGCACCACCAGACGCTGCGTGGGAAGAG +
Preference number: 5 (lower is better)
Translates to: PAGYHGPSGRPGHLC*LGLRSAPPDAAWEE
Trigger: CTCTTCCCACGCAGCGTCTGGTGGTGCAGAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCTCCCTGACGGTCCATGGTACCCAGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 90 bp GCACCTGCTGGGTACCATGGACCGTCAGGGAGACCTGGCCACCTTTaGTGCCTGGGGCTGCGCTCTGCACCACCAGACGCTGCGTGGGAA +
Preference number: 5 (lower is better)
Translates to: APAGYHGPSGRPGHL*CLGLRSAPPDAAWE
Trigger: TTCCCACGCAGCGTCTGGTGGTGCAGAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCTCCCTGACGGTCCATGGTACCCAGCAGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 90 bp TGCTGCACCTGGGCGCTGATGTCCGACAGCCCCGTGCTCGGCTGCTaGCCCACCGCCACGCCGTTGGTCATGCCTTCCATCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: CCTWALMSDSPVLGC*PTATPLVMPSIFWM
Trigger: CATCCAGAAGATGGAAGGCATGACCAACGGCGTGGCGGTGGGGCAGCAGCCGAGCACGGGGCTGTCGGACATCAGCGCCCAGGTGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 90 bp TACTGCTGCACCTGGGCGCTGATGTCCGACAGCCCCGTGCTCGGCTaGTGCCCCACCGCCACGCCGTTGGTCATGCCTTCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: YCCTWALMSDSPVLG*CPTATPLVMPSIFW
Trigger: CCAGAAGATGGAAGGCATGACCAACGGCGTGGCGGTGGGGCAGCAGCCGAGCACGGGGCTGTCGGACATCAGCGCCCAGGTGCAGCAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 90 bp CTGGGTACCATGGACCGTCAGGGAGACCTGGCCACCTTTGCTGCCTaGGGCTGCGCTCTGCACCACCAGACGCTGCGTGGGAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LGTMDRQGDLATFAA*GCALHHQTLRGKSL
Trigger: CAGGCTCTTCCCACGCAGCGTCTGGTGGTGCAGAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCTCCCTGACGGTCCATGGTACCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp GTGGCCTGGACCACAGATCTCTCTTGGGTGACGGGGACACTCTGCTaGACGCCGTGGACCTGCAGCTGCTGTGGCACTGTGCCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: VAWTTDLSWVTGTLC*TPWTCSCCGTVPVG
Trigger: CCCCACGGGCACAGTGCCACAGCAGCTGCAGGTCCACGGCGTCCAGCAGAGTGTCCCCGTCACCCAAGAGAGATCTGTGGTCCAGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp GCTTTGATGTCCCCGGGCCCGACGCCCTCAGGCAGCACCTTGCCCTaGAGGTCGAGCTCTGTGAAGTCAGGGAGGCTCCGAGAGGCATCC +
Preference number: 5 (lower is better)
Translates to: ALMSPGPTPSGSTLP*RSSSVKSGRLREAS
Trigger: GGATGCCTCTCGGAGCCTCCCTGACTTCACAGAGCTCGACCTCCAGGGCAAGGTGCTGCCTGAGGGCGTCGGGCCCGGGGACATCAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAGCGTTGCCGGGTTGCTaGGTCGCCACGACTACCGTG +
Preference number: 5 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTALPGC*VATTTV
Trigger: CACGGTAGTCGTGGCGACCAAGCAACCCGGCAACGC...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGTGCACCGGGCCGGGTTaGGGCGCTTGTGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: WSSDHEATEALRDPGVEGCTGPG*GACGVA
Trigger: GGCCACTCCACAAGCGCCCAAACCCGGCCCGGTGCA...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 90 bp TCGCTGGCCCGCATGGCACCTTCAGAGACAGTGACCACGATGTACTaGTGGGGTGCAGGCGAAGGGGTGGGTGCACCGGTTGGCTGCGAG +
Preference number: 5 (lower is better)
Translates to: SLARMAPSETVTTMY*WGAGEGVGAPVGCE
Trigger: CTCGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAGTACATCGTGGTCACTGTCTCTGAAGGTGCCATGCGGGCCAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS GCA 90 bp GCTGACCTGGGTGGCCGTGCCTGCGGCCTCGTAGTAGCTGGTGCTTaGCGTCTGCGTGTACAGCGGCGTCTCGGGATAGGAGTAGGTGCT +
Preference number: 5 (lower is better)
Translates to: ADLGGRACGLVVAGA*RLRVQRRLGIGVGA
Trigger: AGCACCTACTCCTATCCCGAGACGCCGCTGTACACGCAGACGGCAAGCACCAGCTACTACGAGGCCGCAGGCACGGCCACCCAGGTCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 90 bp CGGTGGGCCAGTTTCTGGCTTCTTGCGCTGACGTCAGGGGAGGAATaGAGTGACGCAGCGCAGCCCCTCTGTGACGACAGCGGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: RWASFWLLALTSGEE*SDAAQPLCDDSGEG
Trigger: GCCTTCGCCGCTGTCGTCACAGAGGGGCTGCGCTGCGTCACTGCATTCCTCCCCTGACGTCAGCGCAAGAAGCCAGAAACTGGCCCACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586913.1
ENST00000673313.1
CDS CCA 90 bp CTGGCCCGCATGGCACCTTCAGAGACAGTGACCACGATGTACTGCTaGGGTGCAGGCGAAGGGGTGGGTGCACCGGTTGGCTGCGAGGGT +
Preference number: 5 (lower is better)
Translates to: LARMAPSETVTTMYC*GAGEGVGAPVGCEG
Trigger: ACCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAGTACATCGTGGTCACTGTCTCTGAAGGTGCCATGCGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS CCA 90 bp TGGTGGCCAGGTGCAGCAGCATTACCTGCTGGGGCACTTGGATGTTaGTCAGCTGGAGGGGCGACACGTGGCCTGGCTTGGCCTGCACGC +
Preference number: 5 (lower is better)
Translates to: WWPGAAALPAGALGC*SAGGATRGLAWPAR
Trigger: GCGTGCAGGCCAAGCCAGGCCACGTGTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGTAATGCTGCTGCACCTGGCCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672908.1
CDS CCA 90 bp TCCCTCCATCCTGGTGAGGACAGATCCAGGCTTGCCACAGGGGGTTaGTCCTCCACCCTGAGGGAGCCTTCCAGGGTGGTGGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: SLHPGEDRSRLATGG*SSTLREPSRVVARC
Trigger: GCACCTGGCCACCACCCTGGAAGGCTCCCTCAGGGTGGAGGACCAACCCCCTGTGGCAAGCCTGGATCTGTCCTCACCAGGATGGAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672908.1
CDS-3UTR CAA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGGGTGGGTGCACCGGTaGGCTGCGAGGGTGCGGGTA +
Preference number: 5 (lower is better)
Translates to: AHESHNSHGVGVARHGGEGWVHR*AARVRV
Trigger: TACCCGCACCCTCGCAGCCAACCGGTGCACCCACCC...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACATTGCTGGAAGAGCTGTaGGCCTGCACCGGCGACTGC +
Preference number: 5 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTLLEEL*ACTGDC
Trigger: GCAGTCGCCGGTGCAGGCCAACAGCTCTTCCAGCAA...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAGAGCTGCTGCACCTCTaGAGCCACGTGGACTGGCTG +
Preference number: 5 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTELLHL*SHVDWL
Trigger: CAGCCAGTCCACGTGGCTCAAGAGGTGCAGCAGCTC...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GAGGGCCCCGGTCTTCCCTGTCTCGGAGTCCCCCTCCCTGCCCTGGCTGAGGCTACAGTGCTTGGTCCATaGGAGCACGGGCTCGAACTT +
Preference number: 5 (lower is better)
Translates to: EGPGLPCLGVPLPALAEATVLGP*EHGLEL
Trigger: AAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGT...AGCCTCAGCCAGGGCAGGGAGGGGGACTCCGAGACAGGGAAGACCGGGGCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTCAGTCCGCGCCAGCTaGGCCGGCGGCTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHSVRAS*AGGSRV
Trigger: GACCCTGGAGCCGCCGGCCAAGCTGGCGCGGACTGA...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGGCCCCCTTCTTGAGCTaGGGGGCAAGGGAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: WSSDHEATEALRDPGVEGAPFLS*GAREGP
Trigger: TGGGCCCTCCCTTGCCCCCAAGCTCAAGAAGGGGGC...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 90 bp CGACAATGGCCTCACAGTGTTCCCGGTACAGGACCTGGAAGGCTTTaGTGTCCCCGGGCCCGACGCCCTCAGGCAGCACCTTGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: RQWPHSVPGTGPGRL*CPRARRPQAAPCPG
Trigger: TCCAGGGCAAGGTGCTGCCTGAGGGCGTCGGGCCCGGGGACATCAAAGCCTTCCAGGTCCTGTACCGGGAACACTGTGAGGCCATTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 90 bp CGGCCTCGTCATGTACAGCCAGCGGTGGCGCCTCACTGGGCTGGCTaGGGTTGTACCTCCAGAAGGTCTTCCACAGCGTCTCCACCAGGG +
Preference number: 5 (lower is better)
Translates to: RPRHVQPAVAPHWAG*GCTSRRSSTASPPG
Trigger: CCCTGGTGGAGACGCTGTGGAAGACCTTCTGGAGGTACAACCTCAGCCAGCCCAGTGAGGCGCCACCGCTGGCTGTACATGACGAGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 90 bp TGGCTGGCGAGGCACGGGTGGTGTGAGAGTAAGACTGGCTGGCACTaGCCAGCATGTAGCCGCCTTGGATCACGTAGGTGCCTGCTCCGC +
Preference number: 5 (lower is better)
Translates to: WLARHGWCESKTGWH*PACSRLGSRRCLLR
Trigger: GCGGAGCAGGCACCTACGTGATCCAAGGCGGCTACATGCTGGGCAGTGCCAGCCAGTCTTACTCTCACACCACCCGTGCCTCGCCAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 90 bp CTGAGGGAGCCTTCCAGGGTGGTGGCCAGGTGCAGCAGCATTACCTaGTGGGGCACTTGGATGTTGGTCAGCTGGAGGGGCGACACGTGG +
Preference number: 5 (lower is better)
Translates to: LREPSRVVARCSSIT*WGTWMLVSWRGDTW
Trigger: CCACGTGTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGTAATGCTGCTGCACCTGGCCACCACCCTGGAAGGCTCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672908.1
CDS CCA 90 bp GTCGGCCGGGCGGTTGTTGTTGTTGACTCGCGTTGCCGGGTTGCTTaGTCGCCACGACTACCGTGGCTATGGCGCCTCCGTTTCCCTCAC +
Preference number: 5 (lower is better)
Translates to: VGRAVVVVDSRCRVA*SPRLPWLWRLRFPH
Trigger: GTGAGGGAAACGGAGGCGCCATAGCCACGGTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAGTCAACAACAACAACCGCCCGGCCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp GGACCGTGGCTGGCGAGGCACGGGTGGTGTGAGAGTAAGACTGGCTaGCACTGCCCAGCATGTAGCCGCCTTGGATCACGTAGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: GPWLARHGWCESKTG*HCPACSRLGSRRCL
Trigger: CAGGCACCTACGTGATCCAAGGCGGCTACATGCTGGGCAGTGCCAGCCAGTCTTACTCTCACACCACCCGTGCCTCGCCAGCCACGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 90 bp AGGTGCAGCAGCATTACCTGCTGGGGCACTTGGATGTTGGTCAGCTaGAGGGGCGACACGTGGCCTGGCTTGGCCTGCACGCTCGTCTGG +
Preference number: 5 (lower is better)
Translates to: RCSSITCWGTWMLVS*RGDTWPGLACTLVW
Trigger: CCAGACGAGCGTGCAGGCCAAGCCAGGCCACGTGTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGTAATGCTGCTGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672908.1
CDS CCA 90 bp AGGGAGCCTTCCAGGGTGGTGGCCAGGTGCAGCAGCATTACCTGCTaGGGCACTTGGATGTTGGTCAGCTGGAGGGGCGACACGTGGCCT +
Preference number: 5 (lower is better)
Translates to: REPSRVVARCSSITC*GTWMLVSWRGDTWP
Trigger: AGGCCACGTGTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGTAATGCTGCTGCACCTGGCCACCACCCTGGAAGGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672908.1
CDS-3UTR CAA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGCAGCTCGGTGACATATaGGGGCTGAGGGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPQLGDI*GLRGGS
Trigger: GCTGCCACCCCTCAGCCCCAATATGTCACCGAGCTG...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTGGGTGGGTGCACCGGTaGGCTGCGAGGGTGCGGGTA +
Preference number: 5 (lower is better)
Translates to: TLDYHTCGHFHHREREPRGWVHR*AARVRV
Trigger: TACCCGCACCCTCGCAGCCAACCGGTGCACCCACCC...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGTGGGGCACTTGGATGTaGGTCAGCTGGAGGGGCGAC +
Preference number: 5 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPWGTWM*VSWRGD
Trigger: GTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCCA...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCTGCACCGGGCCGGGTTaGGGCGCTTGTGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCCTGPG*GACGVA
Trigger: GGCCACTCCACAAGCGCCCAAACCCGGCCCGGTGCA...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGAGGACCTGGAAGGCTTaGATGTCCCCGGGCCCGACG +
Preference number: 5 (lower is better)
Translates to: WSSDHEATEALRDPGVEGRTWKA*MSPGPT
Trigger: CGTCGGGCCCGGGGACATCAAAGCCTTCCAGGTCCT...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAAGCACGGGCTCGAACTaGGAGAGGAGCACCAGGATG +
Preference number: 5 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTSTGSN*ERSTRM
Trigger: CATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCT...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGCCCTGGTACAGCACGTaGTCACAGTGCTTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLPWYST*SQCLVH
Trigger: ATGGACCAAGCACTGTGACAACGTGCTGTACCAGGG...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGGGTCTGTGGGCACTCCCCGGCTCCGCGGCTCGCTGCTCTTTGGAAGCTGTCGCTCAGCATCTGGTaGATCTGTGCGGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: AGVCGHSPAPRLAALWKLSLSIW*ICAVFC
Trigger: GCAGAACACCGCACAGATCAACCAGATGCTGAGCGA...CAGCTTCCAAAGAGCAGCGAGCCGCGGAGCCGGGGAGTGCCCACAGACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCCCCCTTCTTGAGCTaGGGGGCAAGGGAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: AHESHNSHGVGVARHGGEAPFLS*GAREGP
Trigger: TGGGCCCTCCCTTGCCCCCAAGCTCAAGAAGGGGGC...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 90 bp ACCATGACGTCGACAATGGCCTCACAGTGTTCCCGGTACAGGACCTaGAAGGCTTTGATGTCCCCGGGCCCGACGCCCTCAGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: TMTSTMASQCSRYRT*KALMSPGPTPSGST
Trigger: GGTGCTGCCTGAGGGCGTCGGGCCCGGGGACATCAAAGCCTTCCAGGTCCTGTACCGGGAACACTGTGAGGCCATTGTCGACGTCATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGACTCGCGTTGCCGGGTaGCTTGGTCGCCACGACTAC +
Preference number: 5 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWTRVAG*LGRHDY
Trigger: GTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAGT...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGACACGTGGCCTGGCTaGGCCTGCACGCTCGTCTGG +
Preference number: 5 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGDTWPG*ACTLVW
Trigger: CCAGACGAGCGTGCAGGCCAAGCCAGGCCACGTGTC...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGAGCCTGCTGGGGCACTaGGATGTTGGTCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPSLLGH*DVGQLE
Trigger: CTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGCT...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGAGACCTGGCCACCTTaGCTGCCTGGGGCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIETWPP*LPGAAL
Trigger: GAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCTC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCGGGGCCCCGGCTGTCTaGCTGGAAGAGCTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCGAPAV*LEELLA
Trigger: GGCCAACAGCTCTTCCAGCAAGACAGCCGGGGCCCC...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGCGTAGTAGCTGGTGCTaGCCGTCTGCGTGTACAGCG +
Preference number: 5 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPRSSWC*PSACTA
Trigger: CGCTGTACACGCAGACGGCAAGCACCAGCTACTACG...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGATGGGGGTCTCGCCCTaGGCCTGGGCTACGCGGTGC +
Preference number: 5 (lower is better)
Translates to: TWARGGFLKARLLCQSLQMGVSP*AWATRC
Trigger: GCACCGCGTAGCCCAGGCCAAGGGCGAGACCCCCAT...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGAGGGAGGTGGCCAGATaGGCGAACTCGCCCATGACG +
Preference number: 5 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWREVAR*ANSPMT
Trigger: CGTCATGGGCGAGTTCGCCAATCTGGCCACCTCCCT...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGTCTTCCTCCTCGTCTTaGTCGGGGTCCAGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPSSSSS*SGSRGF
Trigger: GAACCCCCTGGACCCCGACAAAGACGAGGAGGAAGA...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTTCAGTCCGCGCCAGCTaGGCCGGCGGCTCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: LCKASELNKLTVSHGRGPSVRAS*AGGSRV
Trigger: GACCCTGGAGCCGCCGGCCAAGCTGGCGCGGACTGA...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCGGCTCGCTGCTCTTaGGAAGCTGGAGGCCGTGCC +
Preference number: 5 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGAARCS*EAGGRA
Trigger: GGCACGGCCTCCAGCTTCCAAAGAGCAGCGAGCCGC...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 90 bp CAGACTTCTCTCTCGCTCGGTGGGCCAGTTTCTGGCTTCTTGCGCTaGCGTCAGGGGAGGAATGCAGTGACGCAGCGCAGCCCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: QTSLSLGGPVSGFLR*RQGRNAVTQRSPSV
Trigger: CACAGAGGGGCTGCGCTGCGTCACTGCATTCCTCCCCTGACGTCAGCGCAAGAAGCCAGAAACTGGCCCACCGAGCGAGAGAGAAGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586913.1
ENST00000673313.1
CDS CCA 90 bp TTCTCGGCCTCGTCATGTACAGCCAGCGGTGGCGCCTCACTGGGCTaGCTGAGGTTGTACCTCCAGAAGGTCTTCCACAGCGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: FSASSCTASGGASLG*LRLYLQKVFHSVST
Trigger: GGTGGAGACGCTGTGGAAGACCTTCTGGAGGTACAACCTCAGCCAGCCCAGTGAGGCGCCACCGCTGGCTGTACATGACGAGGCCGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 90 bp ATTGGAGCACGGGCTCGAACTTGGAGAGGAGCACCAGGATGGCTTTaGGCAGTCGCTTCTCGGCCTCGTCATGTACAGCCAGCGGTGGCG +
Preference number: 5 (lower is better)
Translates to: IGARARTWRGAPGWL*AVASRPRHVQPAVA
Trigger: CGCCACCGCTGGCTGTACATGACGAGGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCCAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGCGTTGCCGGGTTGCTaGGTCGCCACGACTACCGTG +
Preference number: 5 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIALPGC*VATTTV
Trigger: CACGGTAGTCGTGGCGACCAAGCAACCCGGCAACGC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAACTCGCGTTGCCGGGTaGCTTGGTCGCCACGACTAC +
Preference number: 5 (lower is better)
Translates to: AHESHNSHGVGVARHGGETRVAG*LGRHDY
Trigger: GTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAGT...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGCCGGGCGGTTGTTGTaGTTGACTCGCGTTGCCGGG +
Preference number: 5 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIAGRLL*LTRVAG
Trigger: CCCGGCAACGCGAGTCAACAACAACAACCGCCCGGC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAACAGCTCGGTGACATATaGGGGCTGAGGGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: AHESHNSHGVGVARHGGEQLGDI*GLRGGS
Trigger: GCTGCCACCCCTCAGCCCCAATATGTCACCGAGCTG...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGGCCGGGTTTGGGCGCTaGTGGAGTGGCCTGGACCAC +
Preference number: 5 (lower is better)
Translates to: TWARGGFLKARLLCQSLQAGFGR*WSGLDH
Trigger: GTGGTCCAGGCCACTCCACAAGCGCCCAAACCCGGC...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTCCACCTCCGCTGCTGTaGCTGGCCCCAGCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: LCKASELNKLTVSHGRGPPPPLL*LAPAPV
Trigger: CACTGGGGCTGGGGCCAGCAACAGCAGCGGAGGTGG...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGCAGCATGTAGCCGCCTaGGATCACGTAGGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWQHVAA*DHVGAC
Trigger: GCAGGCACCTACGTGATCCAAGGCGGCTACATGCTG...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTCCCTCAGGCAGCACCTaGCCCTGGAGGTCGAGCTCT +
Preference number: 5 (lower is better)
Translates to: TLDYHTCGHFHHREREPRPSGST*PWRSSS
Trigger: AGAGCTCGACCTCCAGGGCAAGGTGCTGCCTGAGGG...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACAGGACCTGGAAGGCTTaGATGTCCCCGGGCCCGACG +
Preference number: 5 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHRTWKA*MSPGPT
Trigger: CGTCGGGCCCGGGGACATCAAAGCCTTCCAGGTCCT...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp TGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGGGAAGATAGGGGCACAAAAGTTCCGGATCGCTaGGGTCAAGGCACTGGGGAT +
Preference number: 5 (lower is better)
Translates to: WGSHGTEEKRGLREDRGTKVPDR*GQGTGD
Trigger: ATCCCCAGTGCCTTGACCCAAGCGATCCGGAACTTT...TGTGCCCCTATCTTCCCGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGATCTCCTCGGGGATGTaGACCATGGCGTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWISSGM*TMAWVS
Trigger: GCTCACCCACGCCATGGTCAACATCCCCGAGGAGAT...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGTCTCCGCTTTTGTGTCAGAGTTaGCAGCTGCGGCTCCGCCCA +
Preference number: 5 (lower is better)
Translates to: HNSHGVGVARHGGEAWSPLLCQS*QLRLRP
Trigger: TGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAG...CGGAGACCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 90 bp GCCCGACGCCCTCAGGCAGCACCTTGCCCTGGAGGTCGAGCTCTGTaGAGTCAGGGAGGCTCCGAGAGGCATCCAAAAATTGCTGGTACT +
Preference number: 5 (lower is better)
Translates to: ARRPQAAPCPGGRAL*SQGGSERHPKIAGT
Trigger: AGTACCAGCAATTTTTGGATGCCTCTCGGAGCCTCCCTGACTTCACAGAGCTCGACCTCCAGGGCAAGGTGCTGCCTGAGGGCGTCGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 90 bp TCGCTGGCCCGCATGGCACCTTCTCCGCTTCTCCCCACTTCTGTCTaGGGAAACGCTTTTCGGAGGTCTCGGAGTCGATGTTGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: SLARMAPSPLLPTSV*GNAFRRSRSRCWEG
Trigger: CCCTTCCCAACATCGACTCCGAGACCTCCGAAAAGCGTTTCCGCAGACAGAAGTGGGGAGAAGCGGAGAAGGTGCCATGCGGGCCAGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589937.5
ENST00000671957.1
CDS CCA 90 bp TGGTCCATTGGAGCACGGGCTCGAACTTGGAGAGGAGCACCAGGATaGCTTTGGGCAGTCGCTTCTCGGCCTCGTCATGTACAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: WSIGARARTWRGAPG*LWAVASRPRHVQPA
Trigger: CGCTGGCTGTACATGACGAGGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCCAATGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 90 bp GAAGACTCCGCTCCAGACTTCTCTCTCGCTCGGTGGGCCAGTTTCTaGCTTCTTGCGCTGACGTCAGGGGAGGAATGCAGTGACGCAGCG +
Preference number: 5 (lower is better)
Translates to: EDSAPDFSLARWASF*LLALTSGEECSDAA
Trigger: CGCTGCGTCACTGCATTCCTCCCCTGACGTCAGCGCAAGAAGCCAGAAACTGGCCCACCGAGCGAGAGAGAAGTCTGGAGCGGAGTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586913.1
ENST00000673313.1
CDS-3UTR CAA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCGCCGGGCGGTTGTTGTaGTTGACTCGCGTTGCCGGG +
Preference number: 5 (lower is better)
Translates to: KASELNKLTVSHGRGPACAGRLL*LTRVAG
Trigger: CCCGGCAACGCGAGTCAACAACAACAACCGCCCGGC...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGTCTCGGAGTCGATGTaGGGAAGGGGACGGGACGTG +
Preference number: 5 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIVSESM*GRGRDV
Trigger: CACGTCCCGTCCCCTTCCCAACATCGACTCCGAGAC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCGTCTCGGAGTCGATGTaGGGAAGGGGACGGGACGTG +
Preference number: 5 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCVSESM*GRGRDV
Trigger: CACGTCCCGTCCCCTTCCCAACATCGACTCCGAGAC...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGACACGTGGCCTGGCTaGGCCTGCACGCTCGTCTGG +
Preference number: 5 (lower is better)
Translates to: LCKASELNKLTVSHGRGPDTWPG*ACTLVW
Trigger: CCAGACGAGCGTGCAGGCCAAGCCAGGCCACGTGTC...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTTGCTGGAAGAGCTGTaGGCCTGCACCGGCGACTGC +
Preference number: 5 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHLLEEL*ACTGDC
Trigger: GCAGTCGCCGGTGCAGGCCAACAGCTCTTCCAGCAA...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTGAGCTGCTGCACCTCTaGAGCCACGTGGACTGGCTG +
Preference number: 5 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIELLHL*SHVDWL
Trigger: CAGCCAGTCCACGTGGCTCAAGAGGTGCAGCAGCTC...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTCCCACCGCCACGCCGTaGGTCATGCCTTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: TLDYHTCGHFHHREREPRPTATP*VMPSIF
Trigger: GAAGATGGAAGGCATGACCAACGGCGTGGCGGTGGG...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTAGCACCAGGATGGCTTaGGGCAGTCGCTTCTCGGCC +
Preference number: 5 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLISTRMA*GSRFSA
Trigger: GGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGCT...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGACGTTGTCACAGTGCTaGGTCCATTGGAGCACGGGC +
Preference number: 5 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWTLSQC*VHWSTG
Trigger: GCCCGTGCTCCAATGGACCAAGCACTGTGACAACGT...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp TGGAGCAGTGACCACGAAGCCACAGAAGCTTTGAGGGACCCTGGCGTGGAGGGGCAGCTCTCCAGGCTCTaGGCAAAGTTCCGGATCGCT +
Preference number: 5 (lower is better)
Translates to: WSSDHEATEALRDPGVEGQLSRL*AKFRIA
Trigger: AGCGATCCGGAACTTTGCCAAGAGCCTGGAGAGCTG...CCCCTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTCGTGGTCACTGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAAGGGAGGTGGCCAGATaGGCGAACTCGCCCATGACG +
Preference number: 5 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGREVAR*ANSPMT
Trigger: CGTCATGGGCGAGTTCGCCAATCTGGCCACCTCCCT...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAATCTTCCTCCTCGTCTTaGTCGGGGTCCAGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: AHESHNSHGVGVARHGGESSSSS*SGSRGF
Trigger: GAACCCCCTGGACCCCGACAAAGACGAGGAGGAAGA...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGGGCGGTTGTTGTTGTaGACTCGCGTTGCCGGGTTG +
Preference number: 5 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGGRLLL*TRVAGL
Trigger: CAACCCGGCAACGCGAGTCAACAACAACAACCGCCC...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAACAGTATACGCCTGTGTaGCCATGCCAACGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: AHESHNSHGVGVARHGGEQYTPV*PCQRWG
Trigger: TCCCCACCGTTGGCATGGCAACACAGGCGTATACTG...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGTGGGGCACTTGGATGTaGGTCAGCTGGAGGGGCGAC +
Preference number: 5 (lower is better)
Translates to: TWARGGFLKARLLCQSLQWGTWM*VSWRGD
Trigger: GTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCCA...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTAGCCTGCTGGGGCACTaGGATGTTGGTCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLISLLGH*DVGQLE
Trigger: CTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGCT...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCGGCACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGACAGCATGTAGCCGCCTaGGATCACGTAGGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ARHTRLPHVWTLSPPGEGQHVAA*DHVGAC
Trigger: GCAGGCACCTACGTGATCCAAGGCGGCTACATGCTG...TCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGTGCCGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGATCTTCTGGATGGGCTaGAGCCTCTGCTTCTGCGAG +
Preference number: 5 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWIFWMG*SLCFCE
Trigger: CTCGCAGAAGCAGAGGCTCAAGCCCATCCAGAAGAT...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGAGCACCAGGATGGCTTaGGGCAGTCGCTTCTCGGCC +
Preference number: 5 (lower is better)
Translates to: TWARGGFLKARLLCQSLQSTRMA*GSRFSA
Trigger: GGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGCT...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAAGCGTGGACAGTGCTTGGTCCATaGGAGCACGGGCTCGAACTT +
Preference number: 5 (lower is better)
Translates to: ESHNSHGVGVARHGGEAWTVLGP*EHGLEL
Trigger: AAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGT...CCACGCTTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTCACGAATCGCACAATAGTCATGGGGTGGGGGTCGCACGGCACGGAGGAGAACAGCTCTCCAGGCTCTaGGCAAAGTTCCGGATCGCT +
Preference number: 5 (lower is better)
Translates to: AHESHNSHGVGVARHGGEQLSRL*AKFRIA
Trigger: AGCGATCCGGAACTTTGCCAAGAGCCTGGAGAGCTG...TTCTCCTCCGTGCCGTGCGACCCCCACCCCATGACTATTGTGCGATTCGTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCGAAGCCACAGAAGCTTaGAGGGACCCTGGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: APGHAAGSLRHVFCVRVCEATEA*RDPGVE
Trigger: CTCCACGCCAGGGTCCCTCAAAGCTTCTGTGGCTTC...GCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 90 bp TCCACCAGGCCCTGGTACAGCACGTTGTCACAGTGCTTGGTCCATTaGAGCACGGGCTCGAACTTGGAGAGGAGCACCAGGATGGCTTTG +
Preference number: 5 (lower is better)
Translates to: STRPWYSTLSQCLVH*STGSNLERSTRMAL
Trigger: CAAAGCCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGTGACAACGTGCTGTACCAGGGCCTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 90 bp AAGGCGAGAAAGGAAGACTCCGCTCCAGACTTCTCTCTCGCTCGGTaGGCCAGTTTCTGGCTTCTTGCGCTGACGTCAGGGGAGGAATGC +
Preference number: 5 (lower is better)
Translates to: KARKEDSAPDFSLAR*ASFWLLALTSGEEC
Trigger: GCATTCCTCCCCTGACGTCAGCGCAAGAAGCCAGAAACTGGCCCACCGAGCGAGAGAGAAGTCTGGAGCGGAGTCTTCCTTTCTCGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586913.1
ENST00000673313.1
CDS-3UTR CAA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATTCGGCCGGGCGGTTGTaGTTGTTGACTCGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHSAGRL*LLTRVA
Trigger: GGCAACGCGAGTCAACAACAACAACCGCCCGGCCGA...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CTGTGCAAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTTCGGCCGGGCGGTTGTaGTTGTTGACTCGCGTTGCC +
Preference number: 5 (lower is better)
Translates to: LCKASELNKLTVSHGRGPSAGRL*LLTRVA
Trigger: GGCAACGCGAGTCAACAACAACAACCGCCCGGCCGA...AGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTTGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGGGTCGGCCGGGCGGTaGTTGTTGTTGACTCGCGTT +
Preference number: 5 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHGSAGR*LLLTRV
Trigger: AACGCGAGTCAACAACAACAACCGCCCGGCCGACCC...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTCAGTATACGCCTGTGTaGCCATGCCAACGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: TLDYHTCGHFHHREREPRQYTPV*PCQRWG
Trigger: TCCCCACCGTTGGCATGGCAACACAGGCGTATACTG...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATCCCACCGCCACGCCGTaGGTCATGCCTTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHPTATP*VMPSIF
Trigger: GAAGATGGAAGGCATGACCAACGGCGTGGCGGTGGG...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACCTGGGCTGGCTGAGGTaGTACCTCCAGAAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHLGWLR*YLQKVF
Trigger: GAAGACCTTCTGGAGGTACAACCTCAGCCAGCCCAG...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTCTGGGCTGGCTGAGGTaGTACCTCCAGAAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TLDYHTCGHFHHREREPRLGWLR*YLQKVF
Trigger: GAAGACCTTCTGGAGGTACAACCTCAGCCAGCCCAG...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTCTTTTGTGTCAGAGTTaGCAGCTGCGGCTCCGCCCA +
Preference number: 5 (lower is better)
Translates to: TLDYHTCGHFHHREREPRLLCQS*QLRLRP
Trigger: TGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAG...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 90 bp GGAATGAGGATTTCCACCAGGCCCTGGTACAGCACGTTGTCACAGTaGTTGGTCCATTGGAGCACGGGCTCGAACTTGGAGAGGAGCACC +
Preference number: 5 (lower is better)
Translates to: GMRISTRPWYSTLSQ*LVHWSTGSNLERST
Trigger: GGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGTGACAACGTGCTGTACCAGGGCCTGGTGGAAATCCTCATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGGAGACCTGGCCACCTTaGCTGCCTGGGGCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: AGEDATPTALIALNTKKGETWPP*LPGAAL
Trigger: GAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCTC...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGGCCGGGTTTGGGCGCTaGTGGAGTGGCCTGGACCAC +
Preference number: 5 (lower is better)
Translates to: AGEDATPTALIALNTKKGAGFGR*WSGLDH
Trigger: GTGGTCCAGGCCACTCCACAAGCGCCCAAACCCGGC...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACCCCTGGTACAGCACGTaGTCACAGTGCTTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: LKARLLCQSLQLRLRPAHPWYST*SQCLVH
Trigger: ATGGACCAAGCACTGTGACAACGTGCTGTACCAGGG...GTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GGCACGTCTTTTGTGTCAGAGTTTGCAGCTGCGGCTCCGCCCAGCCCACTGATTAAAGTTCCGGATCGCTaGGGTCAAGGCACTGGGGAT +
Preference number: 5 (lower is better)
Translates to: GTSFVSEFAAAAPPSPLIKVPDR*GQGTGD
Trigger: ATCCCCAGTGCCTTGACCCAAGCGATCCGGAACTTT...AATCAGTGGGCTGGGCGGAGCCGCAGCTGCAAACTCTGACACAAAAGACGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATATCTCCTCGGGGATGTaGACCATGGCGTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHISSGM*TMAWVS
Trigger: GCTCACCCACGCCATGGTCAACATCCCCGAGGAGAT...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 90 bp TTGTACCTCCAGAAGGTCTTCCACAGCGTCTCCACCAGGGTGAACTaGAGGTTCACCATGACGTCGACAATGGCCTCACAGTGTTCCCGG +
Preference number: 5 (lower is better)
Translates to: LYLQKVFHSVSTRVN*RFTMTSTMASQCSR
Trigger: CCGGGAACACTGTGAGGCCATTGTCGACGTCATGGTGAACCTGCAGTTCACCCTGGTGGAGACGCTGTGGAAGACCTTCTGGAGGTACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp CCAACAAGTTACCAACTCCGCTCGGGCGGCGCTCACGAATCGCACAATAGTCATGACCACAGATCTCTCTaGGGTGACGGGGACACTCTG +
Preference number: 5 (lower is better)
Translates to: PTSYQLRSGGAHESHNSHDHRSL*GDGDTL
Trigger: CAGAGTGTCCCCGTCACCCAAGAGAGATCTGTGGTC...ATGACTATTGTGCGATTCGTGAGCGCCGCCCGAGCGGAGTTGGTAACTTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACCTGGGCACGCGGCGGGTTCCTTAAGGCACGTCTTTTGTGTCAGAGTTTGCAGATCTTCTGGATGGGCTaGAGCCTCTGCTTCTGCGAG +
Preference number: 5 (lower is better)
Translates to: TWARGGFLKARLLCQSLQIFWMG*SLCFCE
Trigger: CTCGCAGAAGCAGAGGCTCAAGCCCATCCAGAAGAT...CTGCAAACTCTGACACAAAAGACGTGCCTTAAGGAACCCGCCGCGTGCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp AAAGCCAGCGAGCTGAATAAGTTAACAGTTTCGCACGGGAGGGGGCCTGCCTGCTCGCTCAGCATCTGGTaGATCTGTGCGGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: KASELNKLTVSHGRGPACSLSIW*ICAVFC
Trigger: GCAGAACACCGCACAGATCAACCAGATGCTGAGCGA...GCAGGCAGGCCCCCTCCCGTGCGAAACTGTTAACTTATTCAGCTCGCTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGTTGAGGAGGAAGAGCTaGGCGGCCTTGGGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: AGEDATPTALIALNTKKGLRRKS*AALGKP
Trigger: CGGCTTCCCCAAGGCCGCCAAGCTCTTCCTCCTCAA...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGCGTAGTAGCTGGTGCTaGCCGTCTGCGTGTACAGCG +
Preference number: 5 (lower is better)
Translates to: AGEDATPTALIALNTKKGRSSWC*PSACTA
Trigger: CGCTGTACACGCAGACGGCAAGCACCAGCTACTACG...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGAGCACGGGCTCGAACTaGGAGAGGAGCACCAGGATG +
Preference number: 5 (lower is better)
Translates to: AGEDATPTALIALNTKKGSTGSN*ERSTRM
Trigger: CATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCT...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp ACACTAGACTACCACACGTGTGGACACTTTCACCACCGGGAGAGGGAGCCCCGTCTTAAGGCACGTCTTTaGTGTCAGAGTTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TLDYHTCGHFHHREREPRLKARL*CQSLQL
Trigger: CAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG...ACGGGGCTCCCTCTCCCGGTGGTGAAAGTGTCCACACGTGTGGTAGTCTAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGGACCACAGATCTCTCTaGGGTGACGGGGACACTCTG +
Preference number: 5 (lower is better)
Translates to: AGEDATPTALIALNTKKGDHRSL*GDGDTL
Trigger: CAGAGTGTCCCCGTCACCCAAGAGAGATCTGTGGTC...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGACGTTGTCACAGTGCTaGGTCCATTGGAGCACGGGC +
Preference number: 5 (lower is better)
Translates to: AGEDATPTALIALNTKKGTLSQC*VHWSTG
Trigger: GCCCGTGCTCCAATGGACCAAGCACTGTGACAACGT...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS-3UTR CAA 90 bp GCTGGAGAAGATGCGACACCCACGGCTTTAATTGCACTTAATACCAAGAAGGGGCTTAAGGCACGTCTTTaGTGTCAGAGTTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: AGEDATPTALIALNTKKGLKARL*CQSLQL
Trigger: CAGCTGCAAACTCTGACACAAAAGACGTGCCTTAAG...CCCCTTCTTGGTATTAAGTGCAATTAAAGCCGTGGGTGTCGCATCTTCTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 72 bp GCACGAAGAGGCCGCGCGCGTCAGTCCGCGCCAGCTTaGCCGGCGGCTCCAGGGTCTCCGGGCCCAGCGCGG +
Preference number: 6 (lower is better)
Translates to: ARRGRARQSAPA*PAAPGSPGPAR
Trigger: CCGCGCTGGGCCCGGAGACCCTGGAGCCGCCGGCCAAGCTGGCGCGGACTGACGCGCGCGGCCTCTTCGTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 72 bp CACTGCTGGCCACCGCCTGGGAGGTGGCGGGGGTGCTaGCCTGGGTGGCCGTGCCTGCGGCCTCGTAGTAGC +
Preference number: 6 (lower is better)
Translates to: HCWPPPGRWRGC*PGWPCLRPRSS
Trigger: GCTACTACGAGGCCGCAGGCACGGCCACCCAGGTCAGCACCCCCGCCACCTCCCAGGCGGTGGCCAGCAGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp CTGCTGGGGTGCAGGCGAAGGGGTGGGTGCACCGGTTaGCTGCGAGGGTGCGGGTACAGCCGGGAGCTCCGT +
Preference number: 6 (lower is better)
Translates to: LLGCRRRGGCTG*LRGCGYSRELR
Trigger: ACGGAGCTCCCGGCTGTACCCGCACCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS CCA 72 bp GGCGACACGTGGCCTGGCTTGGCCTGCACGCTCGTCTaGACCAGCAGCCGCTGCTGGGTGCCCTGCACCTGC +
Preference number: 6 (lower is better)
Translates to: GDTWPGLACTLV*TSSRCWVPCTC
Trigger: GCAGGTGCAGGGCACCCAGCAGCGGCTGCTGGTCCAGACGAGCGTGCAGGCCAAGCCAGGCCACGTGTCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
CDS CAA 72 bp ACTGCTGGGGTGCAGGCGAAGGGGTGGGTGCACCGGTaGGCTGCGAGGGTGCGGGTACAGCCGGGAGCTCCG +
Preference number: 6 (lower is better)
Translates to: TAGVQAKGWVHR*AARVRVQPGAP
Trigger: CGGAGCTCCCGGCTGTACCCGCACCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS GCA 72 bp GAGGGTGCGGGTACAGCCGGGAGCTCCGTCACGTACTaGTTCTGGCCACCCGGTGGCTGTGCCTGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: EGAGTAGSSVTY*FWPPGGCAWGW
Trigger: CCAGCCCCAGGCACAGCCACCGGGTGGCCAGAAGCAGTACGTGACGGAGCTCCCGGCTGTACCCGCACCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS GCA 72 bp GCTGGACGCCGTGGACCTGCAGCTGCTGTGGCACTGTaGCCGTGGGGGCCCCGGCTGTCTTGCTGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: AGRRGPAAAVAL*PWGPRLSCWKS
Trigger: GCTCTTCCAGCAAGACAGCCGGGGCCCCCACGGGCACAGTGCCACAGCAGCTGCAGGTCCACGGCGTCCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 72 bp GGAGGTGGCGGGGGTGCTGACCTGGGTGGCCGTGCCTaGGGCCTCGTAGTAGCTGGTGCTTGCCGTCTGCGT +
Preference number: 6 (lower is better)
Translates to: GGGGGADLGGRA*GLVVAGACRLR
Trigger: ACGCAGACGGCAAGCACCAGCTACTACGAGGCCGCAGGCACGGCCACCCAGGTCAGCACCCCCGCCACCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 72 bp ACCTGGGCGCTGATGTCCGACAGCCCCGTGCTCGGCTaGTGCCCCACCGCCACGCCGTTGGTCATGCCTTCC +
Preference number: 6 (lower is better)
Translates to: TWALMSDSPVLG*CPTATPLVMPS
Trigger: GGAAGGCATGACCAACGGCGTGGCGGTGGGGCAGCAGCCGAGCACGGGGCTGTCGGACATCAGCGCCCAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 72 bp TGGCGACGACCTGGCTGCCGGACACGTACATGGGCATaGAGCCACTGCTGGCCACCGCCTGGGAGGTGGCGG +
Preference number: 6 (lower is better)
Translates to: WRRPGCRTRTWA*SHCWPPPGRWR
Trigger: CCGCCACCTCCCAGGCGGTGGCCAGCAGTGGCTCCATGCCCATGTACGTGTCCGGCAGCCAGGTCGTCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CAA 90 bp GAGGCCCTGCACGGTCAGCGGCTGCACCGGGCCGGGTTTGGGCGCTaGTGGAGTGGCCTGGACCACAGATCTCTCTTGGGTGACGGGGAC +
Preference number: 6 (lower is better)
Translates to: EALHGQRLHRAGFGR*WSGLDHRSLLGDGD
Trigger: GTCCCCGTCACCCAAGAGAGATCTGTGGTCCAGGCCACTCCACAAGCGCCCAAACCCGGCCCGGTGCAGCCGCTGACCGTGCAGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS TCA 72 bp GCAGAGGCCGGCGGGACTGGGCTGGACTGGACTGCCTaGGATGACTCGGAGTGGGGGTGGGCCTTGGCATGC +
Preference number: 6 (lower is better)
Translates to: AEAGGTGLDWTA*DDSEWGWALAC
Trigger: GCATGCCAAGGCCCACCCCCACTCCGAGTCATCTCAGGCAGTCCAGTCCAGCCCAGTCCCGCCGGCCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000589239.5
ENST00000672484.1
CDS TCA 72 bp GGAAGGCACCGCCAGTGCAAAGGCCTAGAGTGGGAGTaGGCGGGGCTGTCGAGGAGCCTCGCAGAGGCCGGC +
Preference number: 6 (lower is better)
Translates to: GRHRQCKGLEWE*AGLSRSLAEAG
Trigger: GCCGGCCTCTGCGAGGCTCCTCGACAGCCCCGCTCACTCCCACTCTAGGCCTTTGCACTGGCGGTGCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589239.5
ENST00000672484.1
CDS GCA 72 bp CACGATGTACTGCTGGGGTGCAGGCGAAGGGGTGGGTaGACCGGTTGGCTGCGAGGGTGCGGGTACAGCCGG +
Preference number: 6 (lower is better)
Translates to: HDVLLGCRRRGG*TGWLRGCGYSR
Trigger: CCGGCTGTACCCGCACCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAGTACATCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS GCA 72 bp GCCTGCACCGGCGACTGCTCTGGGGGCGAGTGCACCTaGTGGGTACCATGGACCGTCAGGGAGACCTGGCCA +
Preference number: 6 (lower is better)
Translates to: ACTGDCSGGECT*WVPWTVRETWP
Trigger: TGGCCAGGTCTCCCTGACGGTCCATGGTACCCAGCAGGTGCACTCGCCCCCAGAGCAGTCGCCGGTGCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 72 bp TGGGCGCTGATGTCCGACAGCCCCGTGCTCGGCTGCTaGCCCACCGCCACGCCGTTGGTCATGCCTTCCATC +
Preference number: 6 (lower is better)
Translates to: WALMSDSPVLGC*PTATPLVMPSI
Trigger: GATGGAAGGCATGACCAACGGCGTGGCGGTGGGGCAGCAGCCGAGCACGGGGCTGTCGGACATCAGCGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 72 bp CGCAGTGTCTGCGCGAAGGCGCCAGCCGCGGCCACCTaGGTGCAGGGATTGAGGGGCTTGCTGCTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: RSVCAKAPAAAT*VQGLRGLLLPR
Trigger: CCTTGGAAGCAGCAAGCCCCTCAATCCCTGCACGCAGGTGGCCGCGGCTGGCGCCTTCGCGCAGACACTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588520.1
ENST00000672811.1
CDS CCA 72 bp GTGGCACTGTGCCCGTGGGGGCCCCGGCTGTCTTGCTaGAAGAGCTGTTGGCCTGCACCGGCGACTGCTCTG +
Preference number: 6 (lower is better)
Translates to: VALCPWGPRLSC*KSCWPAPATAL
Trigger: CAGAGCAGTCGCCGGTGCAGGCCAACAGCTCTTCCAGCAAGACAGCCGGGGCCCCCACGGGCACAGTGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp CGCCGTGGACCTGCAGCTGCTGTGGCACTGTGCCCGTaGGGGCCCCGGCTGTCTTGCTGGAAGAGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: RRGPAAAVALCP*GPRLSCWKSCW
Trigger: CCAACAGCTCTTCCAGCAAGACAGCCGGGGCCCCCACGGGCACAGTGCCACAGCAGCTGCAGGTCCACGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp CTGCTGGAGCTGCTGCACCTCTTGAGCCACGTGGACTaGCTGGAGGCCCTGCACGGTCAGCGGCTGCACCGG +
Preference number: 6 (lower is better)
Translates to: LLELLHLLSHVD*LEALHGQRLHR
Trigger: CCGGTGCAGCCGCTGACCGTGCAGGGCCTCCAGCCAGTCCACGTGGCTCAAGAGGTGCAGCAGCTCCAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp TGGAGCTGGCGACGACCTGGCTGCCGGACACGTACATaGGCATGGAGCCACTGCTGGCCACCGCCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: WSWRRPGCRTRT*AWSHCWPPPGR
Trigger: CCTCCCAGGCGGTGGCCAGCAGTGGCTCCATGCCCATGTACGTGTCCGGCAGCCAGGTCGTCGCCAGCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp GCCCCAGCCCCAGTGCTGGTGGAGCTGGCGACGACCTaGCTGCCGGACACGTACATGGGCATGGAGCCACTG +
Preference number: 6 (lower is better)
Translates to: APAPVLVELATT*LPDTYMGMEPL
Trigger: CAGTGGCTCCATGCCCATGTACGTGTCCGGCAGCCAGGTCGTCGCCAGCTCCACCAGCACTGGGGCTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CAA 72 bp GGGTGGGGGTGGGGGTCGGCCGGGCGGTTGTTGTTGTaGACTCGCGTTGCCGGGTTGCTTGGTCGCCACGAC +
Preference number: 6 (lower is better)
Translates to: GWGWGSAGRLLL*TRVAGLLGRHD
Trigger: GTCGTGGCGACCAAGCAACCCGGCAACGCGAGTCAACAACAACAACCGCCCGGCCGACCCCCACCCCCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000589937.5
ENST00000671957.1
ENST00000672295.1
ENST00000672484.1
CDS CAA 72 bp TGCTGTGGCACTGTGCCCGTGGGGGCCCCGGCTGTCTaGCTGGAAGAGCTGTTGGCCTGCACCGGCGACTGC +
Preference number: 6 (lower is better)
Translates to: CCGTVPVGAPAV*LEELLACTGDC
Trigger: GCAGTCGCCGGTGCAGGCCAACAGCTCTTCCAGCAAGACAGCCGGGGCCCCCACGGGCACAGTGCCACAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CAA 90 bp CCACGATGTACTGCTGGGGTGCAGGCGAAGGGGTGGGTGCACCGGTaGGCTGCGAGGGTGCGGGTACAGCCGGGAGCTCCGTCACGTACT +
Preference number: 6 (lower is better)
Translates to: PRCTAGVQAKGWVHR*AARVRVQPGAPSRT
Trigger: AGTACGTGACGGAGCTCCCGGCTGTACCCGCACCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAGTACATCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS TCA 72 bp GGTGGGGGTGGGGGTCGGCCGGGCGGTTGTTGTTGTTaGCTCGCGTTGCCGGGTTGCTTGGTCGCCACGACT +
Preference number: 6 (lower is better)
Translates to: GGGGGRPGGCCC*LALPGCLVATT
Trigger: AGTCGTGGCGACCAAGCAACCCGGCAACGCGAGTCAACAACAACAACCGCCCGGCCGACCCCCACCCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000589937.5
ENST00000671957.1
ENST00000672295.1
ENST00000672484.1
CDS GCA 72 bp AGGCGAAGGGGTGGGTGCACCGGTTGGCTGCGAGGGTaGGGGTACAGCCGGGAGCTCCGTCACGTACTGCTT +
Preference number: 6 (lower is better)
Translates to: RRRGGCTGWLRG*GYSRELRHVLL
Trigger: AAGCAGTACGTGACGGAGCTCCCGGCTGTACCCGCACCCTCGCAGCCAACCGGTGCACCCACCCCTTCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS GCA 72 bp CGTCAGGGAGACCTGGCCACCTTTGCTGCCTGGGGCTaGGCTCTGCACCACCAGACGCTGCGTGGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: RQGDLATFAAWG*ALHHQTLRGKS
Trigger: GCTCTTCCCACGCAGCGTCTGGTGGTGCAGAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCTCCCTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 72 bp CCTGGGTGGCCGTGCCTGCGGCCTCGTAGTAGCTGGTaGTTGCCGTCTGCGTGTACAGCGGCGTCTCGGGAT +
Preference number: 6 (lower is better)
Translates to: PGWPCLRPRSSW*LPSACTAASRD
Trigger: ATCCCGAGACGCCGCTGTACACGCAGACGGCAAGCACCAGCTACTACGAGGCCGCAGGCACGGCCACCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 72 bp CAGCCCCAGTGCTGGTGGAGCTGGCGACGACCTGGCTaGCGGACACGTACATGGGCATGGAGCCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: QPQCWWSWRRPG*RTRTWAWSHCW
Trigger: CCAGCAGTGGCTCCATGCCCATGTACGTGTCCGGCAGCCAGGTCGTCGCCAGCTCCACCAGCACTGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp ATGGACCGTCAGGGAGACCTGGCCACCTTTGCTGCCTaGGGCTGCGCTCTGCACCACCAGACGCTGCGTGGG +
Preference number: 6 (lower is better)
Translates to: MDRQGDLATFAA*GCALHHQTLRG
Trigger: CCCACGCAGCGTCTGGTGGTGCAGAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCTCCCTGACGGTCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp TGCACCGGCGACTGCTCTGGGGGCGAGTGCACCTGCTaGGTACCATGGACCGTCAGGGAGACCTGGCCACCT +
Preference number: 6 (lower is better)
Translates to: CTGDCSGGECTC*VPWTVRETWPP
Trigger: AGGTGGCCAGGTCTCCCTGACGGTCCATGGTACCCAGCAGGTGCACTCGCCCCCAGAGCAGTCGCCGGTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CAA 72 bp GGGTGGCCGTGCCTGCGGCCTCGTAGTAGCTGGTGCTaGCCGTCTGCGTGTACAGCGGCGTCTCGGGATAGG +
Preference number: 6 (lower is better)
Translates to: GWPCLRPRSSWC*PSACTAASRDR
Trigger: CCTATCCCGAGACGCCGCTGTACACGCAGACGGCAAGCACCAGCTACTACGAGGCCGCAGGCACGGCCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CAA 90 bp TGCACCTGCTGGGTACCATGGACCGTCAGGGAGACCTGGCCACCTTaGCTGCCTGGGGCTGCGCTCTGCACCACCAGACGCTGCGTGGGA +
Preference number: 6 (lower is better)
Translates to: CTCWVPWTVRETWPP*LPGAALCTTRRCVG
Trigger: TCCCACGCAGCGTCTGGTGGTGCAGAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCTCCCTGACGGTCCATGGTACCCAGCAGGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CAA 90 bp GCGCCAGCCGCGGCCACCTTCACCCGCAGCATCTCCTCGGGGATGTaGACCATGGCGTGGGTGAGCCAGCTCTCCAGGCTCTTGGCAAAG +
Preference number: 6 (lower is better)
Translates to: APAAATFTRSISSGM*TMAWVSQLSRLLAK
Trigger: CTTTGCCAAGAGCCTGGAGAGCTGGCTCACCCACGCCATGGTCAACATCCCCGAGGAGATGCTGCGGGTGAAGGTGGCCGCGGCTGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 72 bp GGGTACCATGGACCGTCAGGGAGACCTGGCCACCTTTaGTGCCTGGGGCTGCGCTCTGCACCACCAGACGCT +
Preference number: 6 (lower is better)
Translates to: GYHGPSGRPGHL*CLGLRSAPPDA
Trigger: AGCGTCTGGTGGTGCAGAGCGCAGCCCCAGGCAGCAAAGGTGGCCAGGTCTCCCTGACGGTCCATGGTACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 72 bp GGTGGCCGTGCCTGCGGCCTCGTAGTAGCTGGTGCTTaGCGTCTGCGTGTACAGCGGCGTCTCGGGATAGGA +
Preference number: 6 (lower is better)
Translates to: GGRACGLVVAGA*RLRVQRRLGIG
Trigger: TCCTATCCCGAGACGCCGCTGTACACGCAGACGGCAAGCACCAGCTACTACGAGGCCGCAGGCACGGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp TCGCGTTGCCGGGTTGCTTGGTCGCCACGACTACCGTaGCTATGGCGCCTCCGTTTCCCTCACCGGGGCAAC +
Preference number: 6 (lower is better)
Translates to: SRCRVAWSPRLP*LWRLRFPHRGN
Trigger: GTTGCCCCGGTGAGGGAAACGGAGGCGCCATAGCCACGGTAGTCGTGGCGACCAAGCAACCCGGCAACGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp GGTCAGCGGCTGCACCGGGCCGGGTTTGGGCGCTTGTaGAGTGGCCTGGACCACAGATCTCTCTTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: GQRLHRAGFGRL*SGLDHRSLLGD
Trigger: GTCACCCAAGAGAGATCTGTGGTCCAGGCCACTCCACAAGCGCCCAAACCCGGCCCGGTGCAGCCGCTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp CCAGGAGCCACTGGACCGTGGCTGGCGAGGCACGGGTaGTGTGAGAGTAAGACTGGCTGGCACTGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: PGATGPWLARHG*CESKTGWHCPA
Trigger: TGCTGGGCAGTGCCAGCCAGTCTTACTCTCACACCACCCGTGCCTCGCCAGCCACGGTCCAGTGGCTCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp CCACCAATTCCCCAGGGACTGCTGGGAGTAGACGGATaGCCCTACCTGGTGCCCAGACGGCGGGTTCGCAGG +
Preference number: 6 (lower is better)
Translates to: PPIPQGLLGVDG*PYLVPRRRVRR
Trigger: CCTGCGAACCCGCCGTCTGGGCACCAGGTAGGGCCATCCGTCTACTCCCAGCAGTCCCTGGGGAATTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589239.5
ENST00000672484.1
CDS CAA 72 bp CACGGTCAGCGGCTGCACCGGGCCGGGTTTGGGCGCTaGTGGAGTGGCCTGGACCACAGATCTCTCTTGGGT +
Preference number: 6 (lower is better)
Translates to: HGQRLHRAGFGR*WSGLDHRSLLG
Trigger: ACCCAAGAGAGATCTGTGGTCCAGGCCACTCCACAAGCGCCCAAACCCGGCCCGGTGCAGCCGCTGACCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CAA 72 bp GCGGCCACCTTCACCCGCAGCATCTCCTCGGGGATGTaGACCATGGCGTGGGTGAGCCAGCTCTCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: AATFTRSISSGM*TMAWVSQLSRL
Trigger: GAGCCTGGAGAGCTGGCTCACCCACGCCATGGTCAACATCCCCGAGGAGATGCTGCGGGTGAAGGTGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CAA 90 bp TGGGGGTCGGCCGGGCGGTTGTTGTTGTTGACTCGCGTTGCCGGGTaGCTTGGTCGCCACGACTACCGTGGCTATGGCGCCTCCGTTTCC +
Preference number: 6 (lower is better)
Translates to: WGSAGRLLLLTRVAG*LGRHDYRGYGASVS
Trigger: GGAAACGGAGGCGCCATAGCCACGGTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAGTCAACAACAACAACCGCCCGGCCGACCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CAA 90 bp TGGAAGGCTTTGATGTCCCCGGGCCCGACGCCCTCAGGCAGCACCTaGCCCTGGAGGTCGAGCTCTGTGAAGTCAGGGAGGCTCCGAGAG +
Preference number: 6 (lower is better)
Translates to: WKALMSPGPTPSGST*PWRSSSVKSGRLRE
Trigger: CTCTCGGAGCCTCCCTGACTTCACAGAGCTCGACCTCCAGGGCAAGGTGCTGCCTGAGGGCGTCGGGCCCGGGGACATCAAAGCCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 72 bp GGGGTCGGCCGGGCGGTTGTTGTTGTTGACTCGCGTTaGCGGGTTGCTTGGTCGCCACGACTACCGTGGCTA +
Preference number: 6 (lower is better)
Translates to: GVGRAVVVVDSR*RVAWSPRLPWL
Trigger: TAGCCACGGTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAGTCAACAACAACAACCGCCCGGCCGACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000589937.5
ENST00000671957.1
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp GACTGCTCTGGGGGCGAGTGCACCTGCTGGGTACCATaGACCGTCAGGGAGACCTGGCCACCTTTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: DCSGGECTCWVP*TVRETWPPLLP
Trigger: AGGCAGCAAAGGTGGCCAGGTCTCCCTGACGGTCCATGGTACCCAGCAGGTGCACTCGCCCCCAGAGCAGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp GGACTGCCTGAGATGACTCGGAGTGGGGGTGGGCCTTaGCATGCCCACCAATTCCCCAGGGACTGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: GLPEMTRSGGGP*HAHQFPRDCWE
Trigger: CTCCCAGCAGTCCCTGGGGAATTGGTGGGCATGCCAAGGCCCACCCCCACTCCGAGTCATCTCAGGCAGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589239.5
ENST00000672484.1
CDS CCA 72 bp CCTGGTGAGGACAGATCCAGGCTTGCCACAGGGGGTTaGTCCTCCACCCTGAGGGAGCCTTCCAGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: PGEDRSRLATGG*SSTLREPSRVV
Trigger: CACCACCCTGGAAGGCTCCCTCAGGGTGGAGGACCAACCCCCTGTGGCAAGCCTGGATCTGTCCTCACCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672908.1
CDS CAA 72 bp GCCGGGCGGTTGTTGTTGTTGACTCGCGTTGCCGGGTaGCTTGGTCGCCACGACTACCGTGGCTATGGCGCC +
Preference number: 6 (lower is better)
Translates to: AGRLLLLTRVAG*LGRHDYRGYGA
Trigger: GGCGCCATAGCCACGGTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAGTCAACAACAACAACCGCCCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CAA 72 bp GGTGGCCAGGTGCAGCAGCATTACCTGCTGGGGCACTaGGATGTTGGTCAGCTGGAGGGGCGACACGTGGCC +
Preference number: 6 (lower is better)
Translates to: GGQVQQHYLLGH*DVGQLEGRHVA
Trigger: GGCCACGTGTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGTAATGCTGCTGCACCTGGCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672908.1
CDS CAA 90 bp TCGACAATGGCCTCACAGTGTTCCCGGTACAGGACCTGGAAGGCTTaGATGTCCCCGGGCCCGACGCCCTCAGGCAGCACCTTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: STMASQCSRYRTWKA*MSPGPTPSGSTLPW
Trigger: CCAGGGCAAGGTGCTGCCTGAGGGCGTCGGGCCCGGGGACATCAAAGCCTTCCAGGTCCTGTACCGGGAACACTGTGAGGCCATTGTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 72 bp CTCTCGCTCGGTGGGCCAGTTTCTGGCTTCTTGCGCTaGCGTCAGGGGAGGAATGCAGTGACGCAGCGCAGC +
Preference number: 6 (lower is better)
Translates to: LSLGGPVSGFLR*RQGRNAVTQRS
Trigger: GCTGCGCTGCGTCACTGCATTCCTCCCCTGACGTCAGCGCAAGAAGCCAGAAACTGGCCCACCGAGCGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586913.1
ENST00000673313.1
CDS GCA 72 bp CCTTCCAGGGTGGTGGCCAGGTGCAGCAGCATTACCTaGTGGGGCACTTGGATGTTGGTCAGCTGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: PSRVVARCSSIT*WGTWMLVSWRG
Trigger: GCCCCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGTAATGCTGCTGCACCTGGCCACCACCCTGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672908.1
CDS CCA 72 bp GTGGCCAGGTGCAGCAGCATTACCTGCTGGGGCACTTaGATGTTGGTCAGCTGGAGGGGCGACACGTGGCCT +
Preference number: 6 (lower is better)
Translates to: VARCSSITCWGT*MLVSWRGDTWP
Trigger: AGGCCACGTGTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGTAATGCTGCTGCACCTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672908.1
CDS CCA 72 bp TCCAGGGTGGTGGCCAGGTGCAGCAGCATTACCTGCTaGGGCACTTGGATGTTGGTCAGCTGGAGGGGCGAC +
Preference number: 6 (lower is better)
Translates to: SRVVARCSSITC*GTWMLVSWRGD
Trigger: GTCGCCCCTCCAGCTGACCAACATCCAAGTGCCCCAGCAGGTAATGCTGCTGCACCTGGCCACCACCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000589760.1
ENST00000589937.5
ENST00000671957.1
ENST00000672908.1
CDS CAA 72 bp ACAGCCAGCGGTGGCGCCTCACTGGGCTGGCTGAGGTaGTACCTCCAGAAGGTCTTCCACAGCGTCTCCACC +
Preference number: 6 (lower is better)
Translates to: TASGGASLGWLR*YLQKVFHSVST
Trigger: GGTGGAGACGCTGTGGAAGACCTTCTGGAGGTACAACCTCAGCCAGCCCAGTGAGGCGCCACCGCTGGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CAA 90 bp GGCAGCTCGTCCTCGCTCTCCTCCTCCTCTTCTTCCTCCTCGTCTTaGTCGGGGTCCAGGGGGTTCAGGGAGGTGGCCAGATTGGCGAAC +
Preference number: 6 (lower is better)
Translates to: GSSSSLSSSSSSSSS*SGSRGFREVARLAN
Trigger: GTTCGCCAATCTGGCCACCTCCCTGAACCCCCTGGACCCCGACAAAGACGAGGAGGAAGAAGAGGAGGAGGAGAGCGAGGACGAGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CAA 90 bp CATTGGAGCACGGGCTCGAACTTGGAGAGGAGCACCAGGATGGCTTaGGGCAGTCGCTTCTCGGCCTCGTCATGTACAGCCAGCGGTGGC +
Preference number: 6 (lower is better)
Translates to: HWSTGSNLERSTRMA*GSRFSASSCTASGG
Trigger: GCCACCGCTGGCTGTACATGACGAGGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 72 bp ACCTTCAGAGACAGTGACCACGATGTACTGCTGGGGTaGAGGCGAAGGGGTGGGTGCACCGGTTGGCTGCGA +
Preference number: 6 (lower is better)
Translates to: TFRDSDHDVLLG*RRRGGCTGWLR
Trigger: TCGCAGCCAACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAGTACATCGTGGTCACTGTCTCTGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS GCA 72 bp CGCATGGCACCTTCAGAGACAGTGACCACGATGTACTaGTGGGGTGCAGGCGAAGGGGTGGGTGCACCGGTT +
Preference number: 6 (lower is better)
Translates to: RMAPSETVTTMY*WGAGEGVGAPV
Trigger: AACCGGTGCACCCACCCCTTCGCCTGCACCCCAGCAGTACATCGTGGTCACTGTCTCTGAAGGTGCCATGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000254325.9
ENST00000588885.1
ENST00000589239.5
ENST00000589760.1
ENST00000672295.1
ENST00000672484.1
ENST00000672908.1
ENST00000673115.1
CDS GCA 72 bp TGGACCACAGATCTCTCTTGGGTGACGGGGACACTCTaGTGGACGCCGTGGACCTGCAGCTGCTGTGGCACT +
Preference number: 6 (lower is better)
Translates to: WTTDLSWVTGTL*WTPWTCSCCGT
Trigger: AGTGCCACAGCAGCTGCAGGTCCACGGCGTCCAGCAGAGTGTCCCCGTCACCCAAGAGAGATCTGTGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 72 bp GGGAGGCTCCGAGAGGCATCCAAAAATTGCTGGTACTaGTGCACCTGGGCGCTGATGTCCGACAGCCCCGTG +
Preference number: 6 (lower is better)
Translates to: GRLREASKNCWY*CTWALMSDSPV
Trigger: CACGGGGCTGTCGGACATCAGCGCCCAGGTGCAGCAGTACCAGCAATTTTTGGATGCCTCTCGGAGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 72 bp GCGGTTGTTGTTGTTGACTCGCGTTGCCGGGTTGCTTaGTCGCCACGACTACCGTGGCTATGGCGCCTCCGT +
Preference number: 6 (lower is better)
Translates to: AVVVVDSRCRVA*SPRLPWLWRLR
Trigger: ACGGAGGCGCCATAGCCACGGTAGTCGTGGCGACCAAGCAACCCGGCAACGCGAGTCAACAACAACAACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp ACCACAGATCTCTCTTGGGTGACGGGGACACTCTGCTaGACGCCGTGGACCTGCAGCTGCTGTGGCACTGTG +
Preference number: 6 (lower is better)
Translates to: TTDLSWVTGTLC*TPWTCSCCGTV
Trigger: CACAGTGCCACAGCAGCTGCAGGTCCACGGCGTCCAGCAGAGTGTCCCCGTCACCCAAGAGAGATCTGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp CTGGCGAGGCACGGGTGGTGTGAGAGTAAGACTGGCTaGCACTGCCCAGCATGTAGCCGCCTTGGATCACGT +
Preference number: 6 (lower is better)
Translates to: LARHGWCESKTG*HCPACSRLGSR
Trigger: ACGTGATCCAAGGCGGCTACATGCTGGGCAGTGCCAGCCAGTCTTACTCTCACACCACCCGTGCCTCGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS CCA 72 bp TCGACAATGGCCTCACAGTGTTCCCGGTACAGGACCTaGAAGGCTTTGATGTCCCCGGGCCCGACGCCCTCA +
Preference number: 6 (lower is better)
Translates to: STMASQCSRYRT*KALMSPGPTPS
Trigger: TGAGGGCGTCGGGCCCGGGGACATCAAAGCCTTCCAGGTCCTGTACCGGGAACACTGTGAGGCCATTGTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CAA 72 bp TCCTCGCTCTCCTCCTCCTCTTCTTCCTCCTCGTCTTaGTCGGGGTCCAGGGGGTTCAGGGAGGTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: SSLSSSSSSSSS*SGSRGFREVAR
Trigger: TCTGGCCACCTCCCTGAACCCCCTGGACCCCGACAAAGACGAGGAGGAAGAAGAGGAGGAGGAGAGCGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CAA 90 bp TCGTCATGTACAGCCAGCGGTGGCGCCTCACTGGGCTGGCTGAGGTaGTACCTCCAGAAGGTCTTCCACAGCGTCTCCACCAGGGTGAAC +
Preference number: 6 (lower is better)
Translates to: SSCTASGGASLGWLR*YLQKVFHSVSTRVN
Trigger: GTTCACCCTGGTGGAGACGCTGTGGAAGACCTTCTGGAGGTACAACCTCAGCCAGCCCAGTGAGGCGCCACCGCTGGCTGTACATGACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 72 bp CATGTACAGCCAGCGGTGGCGCCTCACTGGGCTGGCTaGGGTTGTACCTCCAGAAGGTCTTCCACAGCGTCT +
Preference number: 6 (lower is better)
Translates to: HVQPAVAPHWAG*GCTSRRSSTAS
Trigger: AGACGCTGTGGAAGACCTTCTGGAGGTACAACCTCAGCCAGCCCAGTGAGGCGCCACCGCTGGCTGTACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 72 bp AGGCACGGGTGGTGTGAGAGTAAGACTGGCTGGCACTaGCCAGCATGTAGCCGCCTTGGATCACGTAGGTGC +
Preference number: 6 (lower is better)
Translates to: RHGWCESKTGWH*PACSRLGSRRC
Trigger: GCACCTACGTGATCCAAGGCGGCTACATGCTGGGCAGTGCCAGCCAGTCTTACTCTCACACCACCCGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254325.9
ENST00000589239.5
ENST00000672295.1
ENST00000672484.1
CDS GCA 72 bp AGGCTCCGAGAGGCATCCAAAAATTGCTGGTACTGCTaGACCTGGGCGCTGATGTCCGACAGCCCCGTGCTC +
Preference number: 6 (lower is better)
Translates to: RLREASKNCWYC*TWALMSDSPVL
Trigger: GAGCACGGGGCTGTCGGACATCAGCGCCCAGGTGCAGCAGTACCAGCAATTTTTGGATGCCTCTCGGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 72 bp AGTTTCTGGCTTCTTGCGCTGACGTCAGGGGAGGAATaGAGTGACGCAGCGCAGCCCCTCTGTGACGACAGC +
Preference number: 6 (lower is better)
Translates to: SFWLLALTSGEE*SDAAQPLCDDS
Trigger: GCTGTCGTCACAGAGGGGCTGCGCTGCGTCACTGCATTCCTCCCCTGACGTCAGCGCAAGAAGCCAGAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586913.1
ENST00000673313.1
CDS CCA 72 bp CGGGCTCGAACTTGGAGAGGAGCACCAGGATGGCTTTaGGCAGTCGCTTCTCGGCCTCGTCATGTACAGCCA +
Preference number: 6 (lower is better)
Translates to: RARTWRGAPGWL*AVASRPRHVQP
Trigger: TGGCTGTACATGACGAGGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 72 bp GGAGCACGGGCTCGAACTTGGAGAGGAGCACCAGGATaGCTTTGGGCAGTCGCTTCTCGGCCTCGTCATGTA +
Preference number: 6 (lower is better)
Translates to: GARARTWRGAPG*LWAVASRPRHV
Trigger: TACATGACGAGGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CAA 72 bp ACGGGCTCGAACTTGGAGAGGAGCACCAGGATGGCTTaGGGCAGTCGCTTCTCGGCCTCGTCATGTACAGCC +
Preference number: 6 (lower is better)
Translates to: TGSNLERSTRMA*GSRFSASSCTA
Trigger: GGCTGTACATGACGAGGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CAA 90 bp AGCACGTTGTCACAGTGCTTGGTCCATTGGAGCACGGGCTCGAACTaGGAGAGGAGCACCAGGATGGCTTTGGGCAGTCGCTTCTCGGCC +
Preference number: 6 (lower is better)
Translates to: STLSQCLVHWSTGSN*ERSTRMALGSRFSA
Trigger: GGCCGAGAAGCGACTGCCCAAAGCCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGTGACAACGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS TCA 72 bp GTTGAGGCAGTCAGGGGACGTGCAAGTAAGGAGGGGTaGGAAGCACATGAGGTGGAAGGCACCGCCAGTGCA +
Preference number: 6 (lower is better)
Translates to: VEAVRGRASKEG*EAHEVEGTASA
Trigger: TGCACTGGCGGTGCCTTCCACCTCATGTGCTTCTCACCCCTCCTTACTTGCACGTCCCCTGACTGCCTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589239.5
ENST00000672484.1
CDS CCA 72 bp CCACCAGGCCCTGGTACAGCACGTTGTCACAGTGCTTaGTCCATTGGAGCACGGGCTCGAACTTGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: PPGPGTARCHSA*SIGARARTWRG
Trigger: TCCTCTCCAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGTGACAACGTGCTGTACCAGGGCCTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CCA 72 bp GCTCCAGACTTCTCTCTCGCTCGGTGGGCCAGTTTCTaGCTTCTTGCGCTGACGTCAGGGGAGGAATGCAGT +
Preference number: 6 (lower is better)
Translates to: APDFSLARWASF*LLALTSGEECS
Trigger: ACTGCATTCCTCCCCTGACGTCAGCGCAAGAAGCCAGAAACTGGCCCACCGAGCGAGAGAGAAGTCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586913.1
ENST00000673313.1
CDS CCA 72 bp AAGGAAGACTCCGCTCCAGACTTCTCTCTCGCTCGGTaGGCCAGTTTCTGGCTTCTTGCGCTGACGTCAGGG +
Preference number: 6 (lower is better)
Translates to: KEDSAPDFSLAR*ASFWLLALTSG
Trigger: CCCTGACGTCAGCGCAAGAAGCCAGAAACTGGCCCACCGAGCGAGAGAGAAGTCTGGAGCGGAGTCTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586913.1
ENST00000673313.1
CDS CAA 72 bp GCCCTGGTACAGCACGTTGTCACAGTGCTTGGTCCATaGGAGCACGGGCTCGAACTTGGAGAGGAGCACCAG +
Preference number: 6 (lower is better)
Translates to: ALVQHVVTVLGP*EHGLELGEEHQ
Trigger: CTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGTGACAACGTGCTGTACCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CAA 72 bp TCCACCAGGCCCTGGTACAGCACGTTGTCACAGTGCTaGGTCCATTGGAGCACGGGCTCGAACTTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: STRPWYSTLSQC*VHWSTGSNLER
Trigger: CCTCTCCAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGTGACAACGTGCTGTACCAGGGCCTGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CAA 90 bp TTCCACCAGGCCCTGGTACAGCACGTTGTCACAGTGCTTGGTCCATaGGAGCACGGGCTCGAACTTGGAGAGGAGCACCAGGATGGCTTT +
Preference number: 6 (lower is better)
Translates to: FHQALVQHVVTVLGP*EHGLELGEEHQDGF
Trigger: AAAGCCATCCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGTGACAACGTGCTGTACCAGGGCCTGGTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS CAA 90 bp ATGAGGATTTCCACCAGGCCCTGGTACAGCACGTTGTCACAGTGCTaGGTCCATTGGAGCACGGGCTCGAACTTGGAGAGGAGCACCAGG +
Preference number: 6 (lower is better)
Translates to: MRISTRPWYSTLSQC*VHWSTGSNLERSTR
Trigger: CCTGGTGCTCCTCTCCAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGTGACAACGTGCTGTACCAGGGCCTGGTGGAAATCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 72 bp CGCATGGCACCTTCTCCGCTTCTCCCCACTTCTGTCTaGGGAAACGCTTTTCGGAGGTCTCGGAGTCGATGT +
Preference number: 6 (lower is better)
Translates to: RMAPSPLLPTSV*GNAFRRSRSRC
Trigger: ACATCGACTCCGAGACCTCCGAAAAGCGTTTCCGCAGACAGAAGTGGGGAGAAGCGGAGAAGGTGCCATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589937.5
ENST00000671957.1
CDS CCA 72 bp GACGTGCAAGTAAGGAGGGGTGAGAAGCACATGAGGTaGAAGGCACCGCCAGTGCAAAGGCCTAGAGTGGGA +
Preference number: 6 (lower is better)
Translates to: DVQVRRGEKHMR*KAPPVQRPRVG
Trigger: TCCCACTCTAGGCCTTTGCACTGGCGGTGCCTTCCACCTCATGTGCTTCTCACCCCTCCTTACTTGCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589239.5
ENST00000672484.1
CDS GCA 72 bp CAGAAGGTCTTCCACAGCGTCTCCACCAGGGTGAACTaGAGGTTCACCATGACGTCGACAATGGCCTCACAG +
Preference number: 6 (lower is better)
Translates to: QKVFHSVSTRVN*RFTMTSTMASQ
Trigger: CTGTGAGGCCATTGTCGACGTCATGGTGAACCTGCAGTTCACCCTGGTGGAGACGCTGTGGAAGACCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 72 bp ATTTCCACCAGGCCCTGGTACAGCACGTTGTCACAGTaGTTGGTCCATTGGAGCACGGGCTCGAACTTGGAG +
Preference number: 6 (lower is better)
Translates to: ISTRPWYSTLSQ*LVHWSTGSNLE
Trigger: CTCCAAGTTCGAGCCCGTGCTCCAATGGACCAAGCACTGTGACAACGTGCTGTACCAGGGCCTGGTGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254325.9
ENST00000672295.1
CDS GCA 72 bp CTGGGGATAACGAGAACACCCAATTCATCAAATTGCTaGAAAGATCCAATGAGATCAGGCCGGGCACGGTGG +
Preference number: 6 (lower is better)
Translates to: LGITRTPNSSNC*KDPMRSGRARW
Trigger: CCACCGTGCCCGGCCTGATCTCATTGGATCTTTGCAGCAATTTGATGAATTGGGTGTTCTCGTTATCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588885.1
ENST00000673115.1
CDS GCA 72 bp CACCTGGGGATAACGAGAACACCCAATTCATCAAATTaGTGCAAAGATCCAATGAGATCAGGCCGGGCACGG +
Preference number: 6 (lower is better)
Translates to: HLGITRTPNSSN*CKDPMRSGRAR
Trigger: CCGTGCCCGGCCTGATCTCATTGGATCTTTGCAGCAATTTGATGAATTGGGTGTTCTCGTTATCCCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588885.1
ENST00000673115.1
CDS CAA 72 bp TCACCTGGGGATAACGAGAACACCCAATTCATCAAATaGCTGCAAAGATCCAATGAGATCAGGCCGGGCACG +
Preference number: 6 (lower is better)
Translates to: SPGDNENTQFIK*LQRSNEIRPGT
Trigger: CGTGCCCGGCCTGATCTCATTGGATCTTTGCAGCAATTTGATGAATTGGGTGTTCTCGTTATCCCCAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588885.1
ENST00000673115.1