RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RELCH (Homo sapiens)

Ensembl gene IDs: ENSG00000134444

Ensembl transcript IDs: ENST00000256858.10, ENST00000398130.6, ENST00000586920.1, ENST00000587198.1, ENST00000587725.5, ENST00000587764.5, ENST00000588446.1, ENST00000590713.1, ENST00000591227.1, ENST00000592479.5, ENST00000593217.1, ENST00000644646.2

Found 420 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGTTCTCCATGTAGATATGCGGGGGACAGAATTTCCCAGATTTATTaGCGCCTCTCTGGAGAAAAGCAAACAGTTTACATTCCTCATAAC +
Preference number: 1 (lower is better)
Translates to: SSPCRYAGDRISQIY*RLSGEKQTVYIPHN
Trigger: GTTATGAGGAATGTAAACTGTTTGCTTTTCTCCAGAGAGGCGTCAATAAATCTGGGAAATTCTGTCCCCCGCATATCTACATGGAGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644646.2
3UTR GCA 90 bp TACTATACACCAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATaGCTATGTGCTGTCTTTCCTCAGGTAAGTCCATTATATGCATCT +
Preference number: 1 (lower is better)
Translates to: YYTPVCKIHLGYLSP*LCAVFPQVSPLYAS
Trigger: AGATGCATATAATGGACTTACCTGAGGAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTGGTGTATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
3UTR GCA 90 bp TTAAGAAAATATAACCAGCACAGAATGTTAGCTGTAGTTAGCTACTaGAGTTCAAAGATCAGCAGGGTAGTAACTACAGAAAGTTACATC +
Preference number: 1 (lower is better)
Translates to: LRKYNQHRMLAVVSY*SSKISRVVTTESYI
Trigger: GATGTAACTTTCTGTAGTTACTACCCTGCTGATCTTTGAACTGCAGTAGCTAACTACAGCTAACATTCTGTGCTGGTTATATTTTCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644646.2
3UTR-3UTR GCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACTCCCCATGCCTATGTaGTGTCTTTCCTCAGGTAAG +
Preference number: 2 (lower is better)
Translates to: STLFYFELHDCRDNCQIPLPMPM*CLSSGK
Trigger: CTTACCTGAGGAAAGACAGCACATAGGCATGGGGAG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR GCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGGTTACCTCTCCCCATaGCTATGTGCTGTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: STLFYFELHDCRDNCQIPGYLSP*LCAVFP
Trigger: AGGAAAGACAGCACATAGGCATGGGGAGAGGTAACC...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAACAGAACACACAAACTaGTGTCCAAAAGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQTEHTN*CPKGTE
Trigger: CTCTGTGCCTTTTGGACATCAGTTTGTGTGTTCTGT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR GCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGGTTACCTCTCCCCATaGCTATGTGCTGTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: LDSVQISVSMISVCLVCKGYLSP*LCAVFP
Trigger: AGGAAAGACAGCACATAGGCATGGGGAGAGGTAACC...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR TCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAACAGAACACACAAACTaGTGTCCAAAAGGCACAGAG +
Preference number: 2 (lower is better)
Translates to: LDSVQISVSMISVCLVCKTEHTN*CPKGTE
Trigger: CTCTGTGCCTTTTGGACATCAGTTTGTGTGTTCTGT...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR GCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCTTATATGCATCTAAGTaGTGGGGAGGTTTAAATAGC +
Preference number: 2 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFLYASK*WGGLNS
Trigger: GCTATTTAAACCTCCCCAGCACTTAGATGCATATAA...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACATAGACAAGGGACTTaGTACAGACCATCAACTCAA +
Preference number: 2 (lower is better)
Translates to: STLFYFELHDCRDNCQIPHRQGT*YRPSTQ
Trigger: TTGAGTTGATGGTCTGTACCAAGTCCCTTGTCTATG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR CCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATATGCATCTAAGTGCTaGGGAGGTTTAAATAGCACT +
Preference number: 2 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQYASKC*GGLNST
Trigger: AGTGCTATTTAAACCTCCCCAGCACTTAGATGCATA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTAGTGGAACTGTACACTaGCTTAAGACTCTATGTAAT +
Preference number: 2 (lower is better)
Translates to: SSTLFYFELHDCRDNCQISGTVH*LKTLCN
Trigger: ATTACATAGAGTCTTAAGTCAGTGTACAGTTCCACT...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR CCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGTATGCATCTAAGTGCTaGGGAGGTTTAAATAGCACT +
Preference number: 2 (lower is better)
Translates to: SVQISVSMISVCLVCKDKYASKC*GGLNST
Trigger: AGTGCTATTTAAACCTCCCCAGCACTTAGATGCATA...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR CCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAATATGCATCTAAGTGCTaGGGAGGTTTAAATAGCACT +
Preference number: 2 (lower is better)
Translates to: LDSVQISVSMISVCLVCKYASKC*GGLNST
Trigger: AGTGCTATTTAAACCTCCCCAGCACTTAGATGCATA...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR TCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAAGTGGAACTGTACACTaGCTTAAGACTCTATGTAAT +
Preference number: 2 (lower is better)
Translates to: LDSVQISVSMISVCLVCKSGTVH*LKTLCN
Trigger: ATTACATAGAGTCTTAAGTCAGTGTACAGTTCCACT...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
3UTR CAA 90 bp TACTTCTGTTTAAAAGGAATGAGTATGGGAGTTTTATGCCCTATTTaGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTT +
Preference number: 2 (lower is better)
Translates to: YFCLKGMSMGVLCPI*DSVQISVSMISVCL
Trigger: AAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAAAATAGGGCATAAAACTCCCATACTCATTCCTTTTAAACAGAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAAAGGAACCAGTCGGCTaGAGGTCCATCTTAGTGTTT +
Preference number: 3 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQKEPVG*RSILVF
Trigger: AAACACTAAGATGGACCTCAAGCCGACTGGTTCCTT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
3UTR GCA 72 bp CCAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATaGCTATGTGCTGTCTTTCCTCAGGTAAGTCCATTA +
Preference number: 3 (lower is better)
Translates to: PVCKIHLGYLSP*LCAVFPQVSPL
Trigger: TAATGGACTTACCTGAGGAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
3UTR-3UTR CAA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGAAGGAACCAGTCGGCTaGAGGTCCATCTTAGTGTTT +
Preference number: 3 (lower is better)
Translates to: SVQISVSMISVCLVCKDKKEPVG*RSILVF
Trigger: AAACACTAAGATGGACCTCAAGCCGACTGGTTCCTT...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
3UTR TCA 72 bp TGTAGATATGCGGGGGACAGAATTTCCCAGATTTATTaGCGCCTCTCTGGAGAAAAGCAAACAGTTTACATT +
Preference number: 3 (lower is better)
Translates to: CRYAGDRISQIY*RLSGEKQTVYI
Trigger: AATGTAAACTGTTTGCTTTTCTCCAGAGAGGCGTCAATAAATCTGGGAAATTCTGTCCCCCGCATATCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644646.2
3UTR-3UTR CAA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGCTTTTCTACTTCGAGTaGCATGACTGTAGAGACAAC +
Preference number: 3 (lower is better)
Translates to: SVQISVSMISVCLVCKDKLFYFE*HDCRDN
Trigger: GTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAG...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGTCCACAGCCCCGGCCTaGCCACGTCCTGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRSTAPA*PRPASR
Trigger: TCGGGAGGCAGGACGTGGTCAGGCCGGGGCTGTGGA...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGCAGGCTGGAGTGCAGTaGTGCAATAGCGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRQAGVQ*CNSGPL
Trigger: CAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGTTGGCTCGGAGGGCCTaGATGGTCTCCTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRLARRA*MVSLAF
Trigger: GAAAGCCAAGGAGACCATTCAGGCCCTCCGAGCCAA...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGGCTGGAGTGCAGTGGTaGAATAGCGGCCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRAGVQW*NSGPLQ
Trigger: TTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGC...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGTGTGGGCGCCTCCCTaGCTGGTTCCGACGGGCCGC +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGVWAPP*LVPTGR
Trigger: GCGGCCCGTCGGAACCAGTCAGGGAGGCGCCCACAC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGGGCGCCTCCCTGACTaGTTCCGACGGGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGGRLPD*FRRAAA
Trigger: GGCTGCGGCCCGTCGGAACCAGTCAGGGAGGCGCCC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGGGGATCACCCAAGGCTaGCAGCAACAATTCAAAACC +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRGITQG*QQQFKT
Trigger: GGTTTTGAATTGTTGCTGTCAGCCTTGGGTGATCCC...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGGCCACGGGATCCTGTaGCGACAGCGAGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGGHGIL*RQRARR
Trigger: TCTGCGGGCTCGCTGTCGCCACAGGATCCCGTGGCC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGGAGTTCTCTGCAGGCTaGGGAGTTTCAAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPREFSAG*GVSRVG
Trigger: TCCAACTCTTGAAACTCCCCAGCCTGCAGAGAACTC...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGAGTATGTGGAGAAGCTaGTCTCGCTCTTTAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRSMWRS*SRSLGS
Trigger: TGAGCCTAAAGAGCGAGATCAGCTTCTCCACATACT...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCTGCCTCAGCCTCTGCTaGACCAGCAGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGCLSLC*TSSPAL
Trigger: CAGAGCCGGGCTGCTGGTGCAGCAGAGGCTGAGGCA...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGCCTGTCAGTATCATTTaGCTTTGCTCATCATCTGGC +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRPVSII*LCSSSG
Trigger: GCCAGATGATGAGCAAAGGCAAATGATACTGACAGG...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGCATCTTAGTGTTTACTaGGGGCTTCTTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRHLSVY*GLLSCF
Trigger: GAAGCAGGAAAGAAGCCCCCAGTAAACACTAAGATG...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTTCCACAGCCCCGGCCTaGCCACGTCCTGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTSTAPA*PRPASR
Trigger: TCGGGAGGCAGGACGTGGTCAGGCCGGGGCTGTGGA...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGTGGGCGCCTCCCTaGCTGGTTCCGACGGGCCGC +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPVWAPP*LVPTGR
Trigger: GCGGCCCGTCGGAACCAGTCAGGGAGGCGCCCACAC...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCTGGACCAGGCTGGAGTaGAGTGGTGCAATAGCGGCC +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGWTRLE*SGAIAA
Trigger: GGCCGCTATTGCACCACTGCACTCCAGCCTGGTCCA...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGGGCGCCTCCCTGACTaGTTCCGACGGGCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPGRLPD*FRRAAA
Trigger: GGCTGCGGCCCGTCGGAACCAGTCAGGGAGGCGCCC...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATGCTCCCAGCTCGATTaGGCTGTCCCCCGCCCGACG +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQCSQLD*AVPRPT
Trigger: CGTCGGGCGGGGGACAGCTCAATCGAGCTGGGAGCA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCCAGCAGCCCGGCTCTaGAGGCGTCTTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYPAARL*RRLPGL
Trigger: GAGACCAGGAAGACGCCTGCAGAGCCGGGCTGCTGG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256858.10
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGCTTAAAATAACCTCATaGTCTGGAGAGAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRLKITS*SGERCS
Trigger: GGAACATCTCTCTCCAGAGCATGAGGTTATTTTAAG...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAGGCATGAGCCACCGTaGCCGGCCAGTCTCTATTTC +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGRHEPP*PASLYF
Trigger: GAAATAGAGACTGGCCGGGCACGGTGGCTCATGCCT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAGGCCACGGGATCCTGTaGCGACAGCGAGCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQGHGIL*RQRARR
Trigger: TCTGCGGGCTCGCTGTCGCCACAGGATCCCGTGGCC...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAATCCACAGCCCCGGCCTaGCCACGTCCTGCCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKSTAPA*PRPASR
Trigger: TCGGGAGGCAGGACGTGGTCAGGCCGGGGCTGTGGA...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATGCTCCCAGCTCGATTaGGCTGTCCCCCGCCCGACG +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPCSQLD*AVPRPT
Trigger: CGTCGGGCGGGGGACAGCTCAATCGAGCTGGGAGCA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTTGCTCCCAGCTCGATTaGGCTGTCCCCCGCCCGACG +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQICSQLD*AVPRPT
Trigger: CGTCGGGCGGGGGACAGCTCAATCGAGCTGGGAGCA...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGTTAAATCCTCTGAAATaGAACAACAGGAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRLNPLK*NNRKVH
Trigger: GTGCACTTTCCTGTTGTTTCATTTCAGAGGATTTAA...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACCAGCAGCCCGGCTCTaGAGGCGTCTTCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQPAARL*RRLPGL
Trigger: GAGACCAGGAAGACGCCTGCAGAGCCGGGCTGCTGG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256858.10
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATGCCTCAGCCTCTGCTaGACCAGCAGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQCLSLC*TSSPAL
Trigger: CAGAGCCGGGCTGCTGGTGCAGCAGAGGCTGAGGCA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATCACGCCGCCACCACTaGCACTACCTCCAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQSRRHH*HYLQAP
Trigger: TGGCGCCTGGAGGTAGTGGCAGTGGTGGCGGCGTGA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACGCCCAGCCGAAGTACTaGCCGCCGTTCCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYAQPKY*PPFLCC
Trigger: GCAACAGAGGAACGGCGGGCAGTACTTCGGCTGGGC...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTGCCCTGGCCGCGCACTaGTTCCTAAGGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTALAAH*FLRPRD
Trigger: ATCCCGTGGCCTTAGGAAGCAGTGCGCGGCCAGGGC...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCCTCGGAGGGCCTGAATaGTCTCCTTGGCTTTCCGTA +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGLGGPE*SPWLSV
Trigger: TACGGAAAGCCAAGGAGACCATTCAGGCCCTCCGAG...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTACTCCCGGCCTCAAGTaGTCTTCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTTPGLK*SSRLSL
Trigger: GAGGCTGAGGCGGGAAGATCACTTGAGGCCGGGAGT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR GCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATCACGCCGCCACCACTaGCACTACCTCCAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPSRRHH*HYLQAP
Trigger: TGGCGCCTGGAGGTAGTGGCAGTGGTGGCGGCGTGA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAGCCCAGCCGAAGTACTaGCCGCCGTTCCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQAQPKY*PPFLCC
Trigger: GCAACAGAGGAACGGCGGGCAGTACTTCGGCTGGGC...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTGCCCAGCCGAAGTACTaGCCGCCGTTCCTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTAQPKY*PPFLCC
Trigger: GCAACAGAGGAACGGCGGGCAGTACTTCGGCTGGGC...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTGCCCTGGCCGCGCACTaGTTCCTAAGGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIALAAH*FLRPRD
Trigger: ATCCCGTGGCCTTAGGAAGCAGTGCGCGGCCAGGGC...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCGGCCTTTGTCAGGTTaGCTCGGAGGGCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYRPLSG*LGGPEW
Trigger: CCATTCAGGCCCTCCGAGCCAACCTGACAAAGGCCG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCTTGGCTCGGAGGGCCTaGATGGTCTCCTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFLARRA*MVSLAF
Trigger: GAAAGCCAAGGAGACCATTCAGGCCCTCCGAGCCAA...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGTGCCTCAGCCTCTGCTaGACCAGCAGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKCLSLC*TSSPAL
Trigger: CAGAGCCGGGCTGCTGGTGCAGCAGAGGCTGAGGCA...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCCCGCCGTTCCTCTGTTaGAGCTACCTCGTCATCGTC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFPPFLC*SYLVIV
Trigger: GACGATGACGAGGTAGCTGCAACAGAGGAACGGCGG...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGGCCCTGGCCGCGCACTaGTTCCTAAGGCCACGGGAT +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKALAAH*FLRPRD
Trigger: ATCCCGTGGCCTTAGGAAGCAGTGCGCGGCCAGGGC...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTCTAACAGCTCGGTATaGAGCTCCAGGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYSNSSV*SSRAVS
Trigger: GCTGACCGCCCTGGAGCTGCATACCGAGCTGTTAGA...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACGGCGGGGTTCCACTTTaGCTCTCGAAGTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYGGVPL*LSKLPG
Trigger: TCCAGGCAACTTCGAGAGGCAAAGTGGAACCCCGCC...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAAGTTGCAGCAGCACTaGCAATTGCTCACGACTTCC +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGKLQQH*QLLTTS
Trigger: GGAAGTCGTGAGCAATTGGCAGTGCTGCTGCAACTT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGGTTACCTCTCCCCATaGCTATGTGCTGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGGYLSP*LCAVFP
Trigger: AGGAAAGACAGCACATAGGCATGGGGAGAGGTAACC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGAGTTCTCTGCAGGCTaGGGAGTTTCAAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGEFSAG*GVSRVG
Trigger: TCCAACTCTTGAAACTCCCCAGCCTGCAGAGAACTC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATTGGCTCGGAGGGCCTaGATGGTCTCCTTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQLARRA*MVSLAF
Trigger: GAAAGCCAAGGAGACCATTCAGGCCCTCCGAGCCAA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCACACCTCACGAGTGCTaGAGTATGGACAACACCATA +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGTPHEC*SMDNTI
Trigger: TATGGTGTTGTCCATACTTCAGCACTCGTGAGGTGT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACGGCCAACATGGCACCTaGTGTTGTCAACTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYGQHGT*CCQLAH
Trigger: ATGGGCCAGTTGACAACATCAGGTGCCATGTTGGCC...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACTGAGATTACAGGCGTaGGCCACAGCGCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQLRLQA*ATAHSP
Trigger: TGGACTGTGCGCTGTGGCTCACGCCTGTAATCTCAG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACCGCCGTTCCTCTGTTaGAGCTACCTCGTCATCGTC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQPPFLC*SYLVIV
Trigger: GACGATGACGAGGTAGCTGCAACAGAGGAACGGCGG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAGGCGGGGTTCCACTTTaGCTCTCGAAGTTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQGGVPL*LSKLPG
Trigger: TCCAGGCAACTTCGAGAGGCAAAGTGGAACCCCGCC...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCCGTAAGGACTCCTGTTaGATAAATGGGGACTGTAGC +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGRKDSC*INGDCS
Trigger: GCTACAGTCCCCATTTATGCAACAGGAGTCCTTACG...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTCGGAACCTGGGTTCTaGGTTAGGGCCAACTCTACC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYSEPGF*VRANST
Trigger: GGTAGAGTTGGCCCTAACGCAGAACCCAGGTTCCGA...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACGGCCTTTGTCAGGTTaGCTCGGAGGGCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPRPLSG*LGGPEW
Trigger: CCATTCAGGCCCTCCGAGCCAACCTGACAAAGGCCG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCGGCCTTTGTCAGGTTaGCTCGGAGGGCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIRPLSG*LGGPEW
Trigger: CCATTCAGGCCCTCCGAGCCAACCTGACAAAGGCCG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCTTGCCAATAGCACATTaGGAACAATGTGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGLPIAH*EQCVAG
Trigger: GCCTGCCACACATTGTTCCCAATGTGCTATTGGCAA...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAGCTTCTACACGTGTTaGTCCAACATGACGCGCAAA +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGSFYTC*SNMTRK
Trigger: TTTGCGCGTCATGTTGGACCAACACGTGTAGAAGCT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCTGTGGCACTTCACCATaGAGCTTGGCTTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFCGTSP*SLALLE
Trigger: CTCCAGCAAAGCCAAGCTTCATGGTGAAGTGCCACA...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCACAGAACACACAAACTaGTGTCCAAAAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGTEHTN*CPKGTE
Trigger: CTCTGTGCCTTTTGGACATCAGTTTGTGTGTTCTGT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTTCTAACAGCTCGGTATaGAGCTCCAGGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQISNSSV*SSRAVS
Trigger: GCTGACCGCCCTGGAGCTGCATACCGAGCTGTTAGA...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATCTAACAGCTCGGTATaGAGCTCCAGGGCGGTCAGC +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPSNSSV*SSRAVS
Trigger: GCTGACCGCCCTGGAGCTGCATACCGAGCTGTTAGA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAACAGAGTCACAAACTaGTGGGATGGCAAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGNRVTN*WDGKVF
Trigger: GAACACTTTGCCATCCCAGCAGTTTGTGACTCTGTT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAGCAGCACTGCCAATTaGTCACGACTTCCGATAATA +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGSSTAN*SRLPII
Trigger: TATTATCGGAAGTCGTGAGCAATTGGCAGTGCTGCT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGCTGTAGTTAGCTACTaGAGTTCAAAGATCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGAVVSY*SSKISR
Trigger: CCTGCTGATCTTTGAACTGCAGTAGCTAACTACAGC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACGAAGTTGCCTGGATTaGAGAAGTAGTCGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQRSCLD*RSSRAA
Trigger: GGCTGCGCGACTACTTCTCCAATCCAGGCAACTTCG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCATTGGGAACAATGTGTaGCAGGCAGCGTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFIGNNV*QAASQH
Trigger: ATGCTGGGACGCTGCCTGCCACACATTGTTCCCAAT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACCTCATCCGAATCACTaGGAAATGGATTCACGCCGC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQPHPNH*EMDSRR
Trigger: GCGGCGTGAATCCATTTCTCAGTGATTCGGATGAGG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCCTCATCCGAATCACTaGGAAATGGATTCACGCCGC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTPHPNH*EMDSRR
Trigger: GCGGCGTGAATCCATTTCTCAGTGATTCGGATGAGG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGGTTTGATTGGCTCCTaGATTTCAGGACTTGATTTG +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGGLIGS*ISGLDL
Trigger: CAAATCAAGTCCTGAAATTCAGGAGCCAATCAAACC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAAAGAGAGTAGTGCTTaGTGGAATGCAGGAGACAAT +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGKESSA*WNAGDN
Trigger: ATTGTCTCCTGCATTCCATCAAGCACTACTCTCTTT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCGGGATCACCCAAGGCTaGCAGCAACAATTCAAAACC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFGITQG*QQQFKT
Trigger: GGTTTTGAATTGTTGCTGTCAGCCTTGGGTGATCCC...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATGTGGCACTTCACCATaGAGCTTGGCTTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQCGTSP*SLALLE
Trigger: CTCCAGCAAAGCCAAGCTTCATGGTGAAGTGCCACA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCATAGTGGACACATCTTaGAGAGGCGACATAGGCCGA +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFIVDTS*RGDIGR
Trigger: TCGGCCTATGTCGCCTCTTCAAGATGTGTCCACTAT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCGCAGGAACAACCCTCTaGGCTACCAGAGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFAGTTL*ATRVSF
Trigger: GAATGAAACTCTGGTAGCTCAGAGGGTTGTTCCTGC...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256858.10
ENST00000644646.2
CDS-3UTR TCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACGCAGGAACAACCCTCTaGGCTACCAGAGTTTCATTC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYAGTTL*ATRVSF
Trigger: GAATGAAACTCTGGTAGCTCAGAGGGTTGTTCCTGC...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256858.10
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCCAGTCCGTAAACATCTaGGACCAGGTAAAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGQSVNI*DQVKSD
Trigger: ATCACTTTTTACCTGGTCTCAGATGTTTACGGACTG...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCATTGACATTGAGCCTTaGGGCTCTTGGACGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFIDIEP*GSWTVL
Trigger: CAAGACCGTCCAAGAGCCTCAAGGCTCAATGTCAAT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTGGCCAACATGGCACCTaGTGTTGTCAACTGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIGQHGT*CCQLAH
Trigger: ATGGGCCAGTTGACAACATCAGGTGCCATGTTGGCC...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCATTTCCCAGATTTATTaGCGCCTCTCTGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGISQIY*RLSGEK
Trigger: CTTTTCTCCAGAGAGGCGTCAATAAATCTGGGAAAT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR GCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAACCGCCGTTCCTCTGTTaGAGCTACCTCGTCATCGTC +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKPPFLC*SYLVIV
Trigger: GACGATGACGAGGTAGCTGCAACAGAGGAACGGCGG...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACAGGAACTTCATGTTCTaGGGCCTTTGTCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYRNFMF*GLCQVG
Trigger: GCCAACCTGACAAAGGCCGCAGAACATGAAGTTCCT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAGTATCATTTGCCTTTaGTCATCATCTGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGSIICL*SSSGLL
Trigger: CAAGAGGCCAGATGATGAGCAAAGGCAAATGATACT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCCGAATCACTGAGAAATaGATTCACGCCGCCACCACT +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFRITEK*IHAATT
Trigger: AGTGGTGGCGGCGTGAATCCATTTCTCAGTGATTCG...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCGAAGTTGCCTGGATTaGAGAAGTAGTCGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIRSCLD*RSSRAA
Trigger: GGCTGCGCGACTACTTCTCCAATCCAGGCAACTTCG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCCTCTCGAAGTTGCCTaGATTGGAGAAGTAGTCGCG +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTPLEVA*IGEVVA
Trigger: CGCGACTACTTCTCCAATCCAGGCAACTTCGAGAGG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCTCGGAGGGCCTGAATaGTCTCCTTGGCTTTCCGTA +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQILGGPE*SPWLSV
Trigger: TACGGAAAGCCAAGGAGACCATTCAGGCCCTCCGAG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCCTTCTTCTACTCCACTaGCCACATCTACAAGATCTT +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGLLLLH*PHLQDL
Trigger: AAGATCTTGTAGATGTGGCCAGTGGAGTAGAAGAAG...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTATTGGGAACAATGTGTaGCAGGCAGCGTCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTIGNNV*QAASQH
Trigger: ATGCTGGGACGCTGCCTGCCACACATTGTTCCCAAT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCACGAGTGCTGAAGTATaGACAACACCATACCACAAA +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGTSAEV*TTPYHK
Trigger: TTTGTGGTATGGTGTTGTCCATACTTCAGCACTCGT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGCTGCAGGCGTCTTCCTaGTCTCCAGTCTCGCGAGAA +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKLQASS*SPVSRE
Trigger: TTCTCGCGAGACTGGAGACCAGGAAGACGCCTGCAG...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCTCATCCGAATCACTaGGAAATGGATTCACGCCGC +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIPHPNH*EMDSRR
Trigger: GCGGCGTGAATCCATTTCTCAGTGATTCGGATGAGG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACAGTATGTGGAGAAGCTaGTCTCGCTCTTTAGGCTCA +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYSMWRS*SRSLGS
Trigger: TGAGCCTAAAGAGCGAGATCAGCTTCTCCACATACT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCGTGTTGGTCCAACATaGCGCGCAAATGCCACACAA +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIRVGPT*RANATQ
Trigger: TTGTGTGGCATTTGCGCGTCATGTTGGACCAACACG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCCATGTTCTCCTTCCCTaGGAAGTTTTTCAATCTTGT +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGHVLLP*EVFQSC
Trigger: ACAAGATTGAAAAACTTCTCAGGGAAGGAGAACATG...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATGTGGCACTTCACCATaGAGCTTGGCTTTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPCGTSP*SLALLE
Trigger: CTCCAGCAAAGCCAAGCTTCATGGTGAAGTGCCACA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATAGTGGACACATCTTaGAGAGGCGACATAGGCCGA +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQIVDTS*RGDIGR
Trigger: TCGGCCTATGTCGCCTCTTCAAGATGTGTCCACTAT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAGTTGTGGCAACAATTaGTTGACAACCCACAGTAAA +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGSCGNN*LTTHSK
Trigger: TTTACTGTGGGTTGTCAATCAATTGTTGCCACAACT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCTGGTCTTGAACTACTaGCCTCAAGTGATTCGTCAC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYLVLNY*PQVIRH
Trigger: GTGACGAATCACTTGAGGTCAGTAGTTCAAGACCAG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCTTCAAACTCCAGGACTaGCACTTTTTCATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGFKLQD*HFFICF
Trigger: GAAACAGATGAAAAAGTGGCAGTCCTGGAGTTTGAA...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTAGGAACTTCATGTTCTaGGGCCTTTGTCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTRNFMF*GLCQVG
Trigger: GCCAACCTGACAAAGGCCGCAGAACATGAAGTTCCT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAAGGAACTTCATGTTCTaGGGCCTTTGTCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQRNFMF*GLCQVG
Trigger: GCCAACCTGACAAAGGCCGCAGAACATGAAGTTCCT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTTGCTCCACAGGATTCTaGCACAAGCAGTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTCSTGF*HKQSSF
Trigger: GAAAGACGACTGCTTGTGGCAGAATCCTGTGGAGCA...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAAAGTTGCAGCAGCACTaGCAATTGCTCACGACTTCC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQKLQQH*QLLTTS
Trigger: GGAAGTCGTGAGCAATTGGCAGTGCTGCTGCAACTT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCCGTAAGGACTCCTGTTaGATAAATGGGGACTGTAGC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFRKDSC*INGDCS
Trigger: GCTACAGTCCCCATTTATGCAACAGGAGTCCTTACG...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAATCGGAACCTGGGTTCTaGGTTAGGGCCAACTCTACC +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKSEPGF*VRANST
Trigger: GGTAGAGTTGGCCCTAACGCAGAACCCAGGTTCCGA...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGTCGGAACCTGGGTTCTaGGTTAGGGCCAACTCTACC +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKSEPGF*VRANST
Trigger: GGTAGAGTTGGCCCTAACGCAGAACCCAGGTTCCGA...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGAAACAACAGGAAAGTaGACTGTAGGCTTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGETTGK*TVGFKK
Trigger: CTTTTTGAAGCCTACAGTGCACTTTCCTGTTGTTTC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACTCCCCATGCCTATGTaGTGTCTTTCCTCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQLPMPM*CLSSGK
Trigger: CTTACCTGAGGAAAGACAGCACATAGGCATGGGGAG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAGGTTACCTCTCCCCATaGCTATGTGCTGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQGYLSP*LCAVFP
Trigger: AGGAAAGACAGCACATAGGCATGGGGAGAGGTAACC...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCGAATCACTGAGAAATaGATTCACGCCGCCACCACT +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTRITEK*IHAATT
Trigger: AGTGGTGGCGGCGTGAATCCATTTCTCAGTGATTCG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCTCTCGAAGTTGCCTaGATTGGAGAAGTAGTCGCG +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIPLEVA*IGEVVA
Trigger: CGCGACTACTTCTCCAATCCAGGCAACTTCGAGAGG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAACTCGGAGGGCCTGAATaGTCTCCTTGGCTTTCCGTA +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKLGGPE*SPWLSV
Trigger: TACGGAAAGCCAAGGAGACCATTCAGGCCCTCCGAG...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGGGAGTTTCAAGAGTTaGAGGAAGGTTGCTTATAAT +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGGSFKS*RKVAYN
Trigger: ATTATAAGCAACCTTCCTCCAACTCTTGAAACTCCC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAGAGTTCTCTGCAGGCTaGGGAGTTTCAAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQEFSAG*GVSRVG
Trigger: TCCAACTCTTGAAACTCCCCAGCCTGCAGAGAACTC...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTTGCCAATAGCACATTaGGAACAATGTGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYLPIAH*EQCVAG
Trigger: GCCTGCCACACATTGTTCCCAATGTGCTATTGGCAA...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTAGTGATTCGTCACCTTaGCCTCCCAAAGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTSDSSP*PPKVLR
Trigger: TCTCAGCACTTTGGGAGGCCAAGGTGACGAATCACT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
3UTR CAA 72 bp AAAGGCAAGTACTTCAAGTACAAGGAACCAGTCGGCTaGAGGTCCATCTTAGTGTTTACTGGGGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KGKYFKYKEPVG*RSILVFTGGFF
Trigger: AAAGAAGCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAAGTATGTGGAGAAGCTaGTCTCGCTCTTTAGGCTCA +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQSMWRS*SRSLGS
Trigger: TGAGCCTAAAGAGCGAGATCAGCTTCTCCACATACT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAATAGTGGACACATCTTaGAGAGGCGACATAGGCCGA +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPIVDTS*RGDIGR
Trigger: TCGGCCTATGTCGCCTCTTCAAGATGTGTCCACTAT...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCCTATCAAGAGGAGCATaGGATAATGAAAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFLSRGA*DNESSV
Trigger: GACGCTGCTTTCATTATCTCATGCTCCTCTTGATAG...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCTATCAAGAGGAGCATaGGATAATGAAAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYLSRGA*DNESSV
Trigger: GACGCTGCTTTCATTATCTCATGCTCCTCTTGATAG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTACACCTCACGAGTGCTaGAGTATGGACAACACCATA +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTTPHEC*SMDNTI
Trigger: TATGGTGTTGTCCATACTTCAGCACTCGTGAGGTGT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAGAATTGTGGCAATCCTaGCAGAGATTTCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQELWQS*QRFQGH
Trigger: GTGACCCTGAAATCTCTGTCAGGATTGCCACAATTC...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256858.10
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCTTAAATCCTCTGAAATaGAACAACAGGAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGLNPLK*NNRKVH
Trigger: GTGCACTTTCCTGTTGTTTCATTTCAGAGGATTTAA...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAATTGACATTGAGCCTTaGGGCTCTTGGACGGTCTTG +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPIDIEP*GSWTVL
Trigger: CAAGACCGTCCAAGAGCCTCAAGGCTCAATGTCAAT...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACACAGAACACACAAACTaGTGTCCAAAAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYTEHTN*CPKGTE
Trigger: CTCTGTGCCTTTTGGACATCAGTTTGTGTGTTCTGT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAGTGGAACTGTACACTaGCTTAAGACTCTATGTAAT +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGSGTVH*LKTLCN
Trigger: ATTACATAGAGTCTTAAGTCAGTGTACAGTTCCACT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCGAATTGTGGCAATCCTaGCAGAGAATTCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFELWQS*QRIQDH
Trigger: GTGATCCTGAATTCTCTGTCAGGATTGCCACAATTC...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398130.6
CDS-3UTR TCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCATCTCTCTAAAGGGGTaGATAATGCAAACCAATGAA +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGISLKG*IMQTNE
Trigger: TTCATTGGTTTGCATTATTCACCCCTTTAGAGAGAT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCTTTGCCTCTCGAAGTTaGCTGGATTGGAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFFASRS*LDWRSS
Trigger: ACTACTTCTCCAATCCAGGCAACTTCGAGAGGCAAA...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCCTGTCAGTATCATTTaGCTTTGCTCATCATCTGGC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYPVSII*LCSSSG
Trigger: GCCAGATGATGAGCAAAGGCAAATGATACTGACAGG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCAGCAGCACTGCCAATTaGTCACGACTTCCGATAATA +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFSSTAN*SRLPII
Trigger: TATTATCGGAAGTCGTGAGCAATTGGCAGTGCTGCT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACATGGTAGGCTGGGTTTaGACCCAATTCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYMVGWV*TQFHKR
Trigger: TCTTTTGTGGAATTGGGTGCAAACCCAGCCTACCAT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCATTTCTGTACTAACATaGAGTTCTCTGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFISVLT*SSLQAG
Trigger: CCCAGCCTGCAGAGAACTCCATGTTAGTACAGAAAT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACAATAGTGCCAAAGGCTaGAATTGTGGCAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYNSAKG*NCGNPD
Trigger: GTCAGGATTGCCACAATTCCAGCCTTTGGCACTATT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCCATCTTAGTGTTTACTaGGGGCTTCTTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFHLSVY*GLLSCF
Trigger: GAAGCAGGAAAGAAGCCCCCAGTAAACACTAAGATG...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTTCTCTCCTGGGGAATaGATTTGGGGAATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYFSPGE*IWGILF
Trigger: AAAGAGAATTCCCCAAATTCATTCCCCAGGAGAGAA...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCCATTTGTTGCAACATTaGAAGAACCAAGGAGCTACG +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFHLLQH*KNQGAT
Trigger: CGTAGCTCCTTGGTTCTTTCAATGTTGCAACAAATG...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGGGATCACCCAAGGCTaGCAGCAACAATTCAAAACC +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKGITQG*QQQFKT
Trigger: GGTTTTGAATTGTTGCTGTCAGCCTTGGGTGATCCC...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACTATCAAGAGGAGCATaGGATAATGAAAGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQLSRGA*DNESSV
Trigger: GACGCTGCTTTCATTATCTCATGCTCCTCTTGATAG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTGAATTGTGGCAATCCTaGCAGAGATTTCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIELWQS*QRFQGH
Trigger: GTGACCCTGAAATCTCTGTCAGGATTGCCACAATTC...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256858.10
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTACAGAACACACAAACTaGTGTCCAAAAGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTTEHTN*CPKGTE
Trigger: CTCTGTGCCTTTTGGACATCAGTTTGTGTGTTCTGT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTAATGTGATAGCACCTTaGCTTGAGACCCCCATTAGA +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTNVIAP*LETPIR
Trigger: TCTAATGGGGGTCTCAAGTCAAGGTGCTATCACATT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATTTGCCTCTCGAAGTTaGCTGGATTGGAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQFASRS*LDWRSS
Trigger: ACTACTTCTCCAATCCAGGCAACTTCGAGAGGCAAA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTTTTGCCTCTCGAAGTTaGCTGGATTGGAGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTFASRS*LDWRSS
Trigger: ACTACTTCTCCAATCCAGGCAACTTCGAGAGGCAAA...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAAACAGAGTCACAAACTaGTGGGATGGCAAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQNRVTN*WDGKVF
Trigger: GAACACTTTGCCATCCCAGCAGTTTGTGACTCTGTT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTAACAGAGTCACAAACTaGTGGGATGGCAAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTNRVTN*WDGKVF
Trigger: GAACACTTTGCCATCCCAGCAGTTTGTGACTCTGTT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCTATTTACATCTGGATaGTGTCCACTGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTLFTSG*CPLSSE
Trigger: CTCTGAGGACAGTGGACAGCATCCAGATGTAAATAG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAAACATGACGCGCAAATaGCACACAACCTGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQNMTRK*HTTCQY
Trigger: ATACTGACAGGTTGTGTGGCATTTGCGCGTCATGTT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGTGCTCCACAGGATTCTaGCACAAGCAGTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKCSTGF*HKQSSF
Trigger: GAAAGACGACTGCTTGTGGCAGAATCCTGTGGAGCA...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAATGCTCCACAGGATTCTaGCACAAGCAGTCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKCSTGF*HKQSSF
Trigger: GAAAGACGACTGCTTGTGGCAGAATCCTGTGGAGCA...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAAAGTTGCAGCAGCACTaGCAATTGCTCACGACTTCC +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKKLQQH*QLLTTS
Trigger: GGAAGTCGTGAGCAATTGGCAGTGCTGCTGCAACTT...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAACTCCCCATGCCTATGTaGTGTCTTTCCTCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKLPMPM*CLSSGK
Trigger: CTTACCTGAGGAAAGACAGCACATAGGCATGGGGAG...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGGGTTACCTCTCCCCATaGCTATGTGCTGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKGYLSP*LCAVFP
Trigger: AGGAAAGACAGCACATAGGCATGGGGAGAGGTAACC...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCTATAGAGATAGATACTaGCATCATTCAAGCACTGTT +
Preference number: 4 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGYRDRY*HHSSTV
Trigger: AACAGTGCTTGAATGATGGCAGTATCTATCTCTATA...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGCGAATCACTGAGAAATaGATTCACGCCGCCACCACT +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKRITEK*IHAATT
Trigger: AGTGGTGGCGGCGTGAATCCATTTCTCAGTGATTCG...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTATTTCTGTACTAACATaGAGTTCTCTGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTISVLT*SSLQAG
Trigger: CCCAGCCTGCAGAGAACTCCATGTTAGTACAGAAAT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAAGCTTCTACACGTGTTaGTCCAACATGACGCGCAAA +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPSFYTC*SNMTRK
Trigger: TTTGCGCGTCATGTTGGACCAACACGTGTAGAAGCT...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAGAAGCTTGGCTTTGCTaGAGAAAGGTGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQEAWLC*RKVHSV
Trigger: TACAGAATGCACCTTTCTCCAGCAAAGCCAAGCTTC...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCACGAGTGCTGAAGTATaGACAACACCATACCACAAA +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFTSAEV*TTPYHK
Trigger: TTTGTGGTATGGTGTTGTCCATACTTCAGCACTCGT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTAATAGTGCCAAAGGCTaGAATTGTGGCAATCCTGAC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTNSAKG*NCGNPD
Trigger: GTCAGGATTGCCACAATTCCAGCCTTTGGCACTATT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACATACATTGGCCAACATaGCACCTGATGTTGTCAACT +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYIHWPT*HLMLST
Trigger: AGTTGACAACATCAGGTGCCATGTTGGCCAATGTAT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCATACATTGGCCAACATaGCACCTGATGTTGTCAACT +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFIHWPT*HLMLST
Trigger: AGTTGACAACATCAGGTGCCATGTTGGCCAATGTAT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCTTCTCTGAAATACATTaGCCAACATGGCACCTGATG +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFFSEIH*PTWHLM
Trigger: CATCAGGTGCCATGTTGGCCAATGTATTTCAGAGAA...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTTCTCTGAAATACATTaGCCAACATGGCACCTGATG +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYFSEIH*PTWHLM
Trigger: CATCAGGTGCCATGTTGGCCAATGTATTTCAGAGAA...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCATCTTAGTGTTTACTaGGGGCTTCTTTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTHLSVY*GLLSCF
Trigger: GAAGCAGGAAAGAAGCCCCCAGTAAACACTAAGATG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCATAGACAAGGGACTTaGTACAGACCATCAACTCAA +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYHRQGT*YRPSTQ
Trigger: TTGAGTTGATGGTCTGTACCAAGTCCCTTGTCTATG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTGGTTTGATTGGCTCCTaGATTTCAGGACTTGATTTG +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTGLIGS*ISGLDL
Trigger: CAAATCAAGTCCTGAAATTCAGGAGCCAATCAAACC...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTAAAGAGAGTAGTGCTTaGTGGAATGCAGGAGACAAT +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTKESSA*WNAGDN
Trigger: ATTGTCTCCTGCATTCCATCAAGCACTACTCTCTTT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCCTTTCTGGGTATTTGTaGTTAATCTGTTCCCAACAC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFLSGYL*LICSQH
Trigger: GTGTTGGGAACAGATTAATCACAAATACCCAGAAAG...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCATTTGTTGCAACATTaGAAGAACCAAGGAGCTACG +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTHLLQH*KNQGAT
Trigger: CGTAGCTCCTTGGTTCTTTCAATGTTGCAACAAATG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCTATTTACATCTGGATaGTGTCCACTGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQILFTSG*CPLSSE
Trigger: CTCTGAGGACAGTGGACAGCATCCAGATGTAAATAG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACTATTTACATCTGGATaGTGTCCACTGTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPLFTSG*CPLSSE
Trigger: CTCTGAGGACAGTGGACAGCATCCAGATGTAAATAG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTAGTATCATTTGCCTTTaGTCATCATCTGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTSIICL*SSSGLL
Trigger: CAAGAGGCCAGATGATGAGCAAAGGCAAATGATACT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAAGTATCATTTGCCTTTaGTCATCATCTGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQSIICL*SSSGLL
Trigger: CAAGAGGCCAGATGATGAGCAAAGGCAAATGATACT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACCTGTCAGTATCATTTaGCTTTGCTCATCATCTGGC +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPPVSII*LCSSSG
Trigger: GCCAGATGATGAGCAAAGGCAAATGATACTGACAGG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTAACATGACGCGCAAATaGCACACAACCTGTCAGTAT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQINMTRK*HTTCQY
Trigger: ATACTGACAGGTTGTGTGGCATTTGCGCGTCATGTT...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGCGTAAGGACTCCTGTTaGATAAATGGGGACTGTAGC +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKRKDSC*INGDCS
Trigger: GCTACAGTCCCCATTTATGCAACAGGAGTCCTTACG...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTATGGTAGGCTGGGTTTaGACCCAATTCCACAAAAGA +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIMVGWV*TQFHKR
Trigger: TCTTTTGTGGAATTGGGTGCAAACCCAGCCTACCAT...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCGAAACAACAGGAAAGTaGACTGTAGGCTTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFETTGK*TVGFKK
Trigger: CTTTTTGAAGCCTACAGTGCACTTTCCTGTTGTTTC...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCCTTAAAATAACCTCATaGTCTGGAGAGAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFLKITS*SGERCS
Trigger: GGAACATCTCTCTCCAGAGCATGAGGTTATTTTAAG...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGCTAACGCTTCACTCATaGCTCGAAGAGTCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKLTLHS*LEESAQ
Trigger: TTGAGCTGACTCTTCGAGGCATGAGTGAAGCGTTAG...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398130.6
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACAGTATGGGAGTTTTATaGCCTATTTTGGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYSMGVL*PILDSV
Trigger: GACTGAGTCCAAAATAGGGCATAAAACTCCCATACT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCTTCAAGAGGTTTGATTaGCTCCTGAATTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFFKRFD*LLNFRT
Trigger: AGTCCTGAAATTCAGGAGCCAATCAAACCTCTTGAA...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCGGGAGTTTCAAGAGTTaGAGGAAGGTTGCTTATAAT +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFGSFKS*RKVAYN
Trigger: ATTATAAGCAACCTTCCTCCAACTCTTGAAACTCCC...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAATTGCCAATAGCACATTaGGAACAATGTGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKLPIAH*EQCVAG
Trigger: GCCTGCCACACATTGTTCCCAATGTGCTATTGGCAA...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGAAGCTTGGCTTTGCTaGAGAAAGGTGCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPEAWLC*RKVHSV
Trigger: TACAGAATGCACCTTTCTCCAGCAAAGCCAAGCTTC...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTTTCTCTGAAATACATTaGCCAACATGGCACCTGATG +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTFSEIH*PTWHLM
Trigger: CATCAGGTGCCATGTTGGCCAATGTATTTCAGAGAA...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCTATGCATCTAAGTGCTaGGGAGGTTTAAATAGCACT +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFYASKC*GGLNST
Trigger: AGTGCTATTTAAACCTCCCCAGCACTTAGATGCATA...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTAAAGAGAGTAGTGCTTaGTGGAATGCAGGAGACAAT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIKESSA*WNAGDN
Trigger: ATTGTCTCCTGCATTCCATCAAGCACTACTCTCTTT...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCGCTGGTAAAAATACTTaGTGTGTAGCACTAACTACT +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFAGKNT*CVALTT
Trigger: AGTAGTTAGTGCTACACATCAAGTATTTTTACCAGC...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTGTGGCAACAATTGATTaGCAACCCACAGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIVATID*QPTVNS
Trigger: AGAGTTTACTGTGGGTTGTCAATCAATTGTTGCCAC...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCAGTCCGTAAACATCTaGGACCAGGTAAAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIQSVNI*DQVKSD
Trigger: ATCACTTTTTACCTGGTCTCAGATGTTTACGGACTG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCAGTGGAACTGTACACTaGCTTAAGACTCTATGTAAT +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFSGTVH*LKTLCN
Trigger: ATTACATAGAGTCTTAAGTCAGTGTACAGTTCCACT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACAGTGGAACTGTACACTaGCTTAAGACTCTATGTAAT +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYSGTVH*LKTLCN
Trigger: ATTACATAGAGTCTTAAGTCAGTGTACAGTTCCACT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACTTAAAATAACCTCATaGTCTGGAGAGAGATGTTCC +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQLKITS*SGERCS
Trigger: GGAACATCTCTCTCCAGAGCATGAGGTTATTTTAAG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCTTTTCTACTTCGAGTTaGATGACTGTAGAGACAACT +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFFSTSS*MTVETT
Trigger: AGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAA...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTCAATTTCTCAGGAATaGCTAGAACCCAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYSISQE*LEPNSF
Trigger: AAAACTGTTGGGTTCTAGGCATTCCTGAGAAATTGA...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATTCAAGAGGTTTGATTaGCTCCTGAATTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQFKRFD*LLNFRT
Trigger: AGTCCTGAAATTCAGGAGCCAATCAAACCTCTTGAA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACTTCTTCTACTCCACTaGCCACATCTACAAGATCTT +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPLLLLH*PHLQDL
Trigger: AAGATCTTGTAGATGTGGCCAGTGGAGTAGAAGAAG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAATTTCTGTACTAACATaGAGTTCTCTGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKISVLT*SSLQAG
Trigger: CCCAGCCTGCAGAGAACTCCATGTTAGTACAGAAAT...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCAAGCAGTCGTCTTTCTaGGTATTTGTGATTAATCTG +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFKQSSF*VFVINL
Trigger: CAGATTAATCACAAATACCCAGAAAGACGACTGCTT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACAAGCAGTCGTCTTTCTaGGTATTTGTGATTAATCTG +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYKQSSF*VFVINL
Trigger: CAGATTAATCACAAATACCCAGAAAGACGACTGCTT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCCTGATGTTGTCAACTaGCCCATTTTGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTPDVVN*PILFKN
Trigger: GTTTTTGAACAAAATGGGCCAGTTGACAACATCAGG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTATACATTGGCCAACATaGCACCTGATGTTGTCAACT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIIHWPT*HLMLST
Trigger: AGTTGACAACATCAGGTGCCATGTTGGCCAATGTAT...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCATAGACAAGGGACTTaGTACAGACCATCAACTCAA +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIHRQGT*YRPSTQ
Trigger: TTGAGTTGATGGTCTGTACCAAGTCCCTTGTCTATG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTTATGCATCTAAGTGCTaGGGAGGTTTAAATAGCACT +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTYASKC*GGLNST
Trigger: AGTGCTATTTAAACCTCCCCAGCACTTAGATGCATA...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAATTCTCTCCTGGGGAATaGATTTGGGGAATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKFSPGE*IWGILF
Trigger: AAAGAGAATTCCCCAAATTCATTCCCCAGGAGAGAA...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACTTTCTGGGTATTTGTaGTTAATCTGTTCCCAACAC +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPLSGYL*LICSQH
Trigger: GTGTTGGGAACAGATTAATCACAAATACCCAGAAAG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGCATTTGTTGCAACATTaGAAGAACCAAGGAGCTACG +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKHLLQH*KNQGAT
Trigger: CGTAGCTCCTTGGTTCTTTCAATGTTGCAACAAATG...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTGCTGGTAAAAATACTTaGTGTGTAGCACTAACTACT +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTAGKNT*CVALTT
Trigger: AGTAGTTAGTGCTACACATCAAGTATTTTTACCAGC...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCATGTTCTCCTTCCCTaGGAAGTTTTTCAATCTTGT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIHVLLP*EVFQSC
Trigger: ACAAGATTGAAAAACTTCTCAGGGAAGGAGAACATG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACATGTTCTCCTTCCCTaGGAAGTTTTTCAATCTTGT +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPHVLLP*EVFQSC
Trigger: ACAAGATTGAAAAACTTCTCAGGGAAGGAGAACATG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGTGGCAACAATTGATTaGCAACCCACAGTAAACTCT +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKVATID*QPTVNS
Trigger: AGAGTTTACTGTGGGTTGTCAATCAATTGTTGCCAC...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAAGTTGTGGCAACAATTaGTTGACAACCCACAGTAAA +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPSCGNN*LTTHSK
Trigger: TTTACTGTGGGTTGTCAATCAATTGTTGCCACAACT...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTTTAAATCCTCTGAAATaGAACAACAGGAAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTLNPLK*NNRKVH
Trigger: GTGCACTTTCCTGTTGTTTCATTTCAGAGGATTTAA...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGCAGTCCGTAAACATCTaGGACCAGGTAAAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKQSVNI*DQVKSD
Trigger: ATCACTTTTTACCTGGTCTCAGATGTTTACGGACTG...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAAAATCTCAGTCTCAATaGTTAGTGTCTGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQKSQSQ*LVSVLS
Trigger: AGACAAGACAGACACTAATCATTGAGACTGAGATTT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATTCAAACTCCAGGACTaGCACTTTTTCATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPFKLQD*HFFICF
Trigger: GAAACAGATGAAAAAGTGGCAGTCCTGGAGTTTGAA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCTTAAGTCTTCTGATTTaGTCCATCAATGACCATTTC +
Preference number: 4 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFLSLLI*SINDHF
Trigger: GAAATGGTCATTGATGGAGCAAATCAGAAGACTTAA...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTTAAGTCTTCTGATTTaGTCCATCAATGACCATTTC +
Preference number: 4 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYLSLLI*SINDHF
Trigger: GAAATGGTCATTGATGGAGCAAATCAGAAGACTTAA...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTGAAACAACAGGAAAGTaGACTGTAGGCTTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIETTGK*TVGFKK
Trigger: CTTTTTGAAGCCTACAGTGCACTTTCCTGTTGTTTC...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTTTTTCTACTTCGAGTTaGATGACTGTAGAGACAACT +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTFSTSS*MTVETT
Trigger: AGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAA...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATTCAAGAGGTTTGATTaGCTCCTGAATTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPFKRFD*LLNFRT
Trigger: AGTCCTGAAATTCAGGAGCCAATCAAACCTCTTGAA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAACTTCTTCTACTCCACTaGCCACATCTACAAGATCTT +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKLLLLH*PHLQDL
Trigger: AAGATCTTGTAGATGTGGCCAGTGGAGTAGAAGAAG...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGGGAGTTTCAAGAGTTaGAGGAAGGTTGCTTATAAT +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPGSFKS*RKVAYN
Trigger: ATTATAAGCAACCTTCCTCCAACTCTTGAAACTCCC...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTAAGCAGTCGTCTTTCTaGGTATTTGTGATTAATCTG +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTKQSSF*VFVINL
Trigger: CAGATTAATCACAAATACCCAGAAAGACGACTGCTT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACCTGATGTTGTCAACTaGCCCATTTTGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPPDVVN*PILFKN
Trigger: GTTTTTGAACAAAATGGGCCAGTTGACAACATCAGG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGCATAGACAAGGGACTTaGTACAGACCATCAACTCAA +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKHRQGT*YRPSTQ
Trigger: TTGAGTTGATGGTCTGTACCAAGTCCCTTGTCTATG...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTTATGCATCTAAGTGCTaGGGAGGTTTAAATAGCACT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIYASKC*GGLNST
Trigger: AGTGCTATTTAAACCTCCCCAGCACTTAGATGCATA...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTTTTTATGCCCTATTTTaGACTCAGTCCAAATCTCAG +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTFYALF*TQSKSQ
Trigger: CTGAGATTTGGACTGAGTCCAAAATAGGGCATAAAA...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTTTCTACTTCTTTCTCTaGAATACATTGGCCAACATG +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIFYFFL*NTLANM
Trigger: CATGTTGGCCAATGTATTTCAGAGAAAGAAGTAGAA...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGTTCAAACTCCAGGACTaGCACTTTTTCATCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKFKLQD*HFFICF
Trigger: GAAACAGATGAAAAAGTGGCAGTCCTGGAGTTTGAA...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTTTAAGTCTTCTGATTTaGTCCATCAATGACCATTTC +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTLSLLI*SINDHF
Trigger: GAAATGGTCATTGATGGAGCAAATCAGAAGACTTAA...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTTTATATGCATCTAAGTaGTGGGGAGGTTTAAATAGC +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQILYASK*WGGLNS
Trigger: GCTATTTAAACCTCCCCAGCACTTAGATGCATATAA...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATTATATGCATCTAAGTaGTGGGGAGGTTTAAATAGC +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPLYASK*WGGLNS
Trigger: GCTATTTAAACCTCCCCAGCACTTAGATGCATATAA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTTTTTCTACTTCGAGTTaGATGACTGTAGAGACAACT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIFSTSS*MTVETT
Trigger: AGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAA...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTTCAATTTCTCAGGAATaGCTAGAACCCAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQISISQE*LEPNSF
Trigger: AAAACTGTTGGGTTCTAGGCATTCCTGAGAAATTGA...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAAGTATGGGAGTTTTATaGCCTATTTTGGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKSMGVL*PILDSV
Trigger: GACTGAGTCCAAAATAGGGCATAAAACTCCCATACT...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCTGATGATATTTGTCTaGATCATCAATGTATCCCAT +
Preference number: 4 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTLMIFV*IINVSH
Trigger: ATGGGATACATTGATGATCCAGACAAATATCATCAG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAACCTGATGTTGTCAACTaGCCCATTTTGTTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKPDVVN*PILFKN
Trigger: GTTTTTGAACAAAATGGGCCAGTTGACAACATCAGG...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATTTTATGCCCTATTTTaGACTCAGTCCAAATCTCAG +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPFYALF*TQSKSQ
Trigger: CTGAGATTTGGACTGAGTCCAAAATAGGGCATAAAA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATTATTGACGCCTCTCTaGAGAAAAGCAAACAGTTTA +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPLLTPL*RKANSL
Trigger: TAAACTGTTTGCTTTTCTCCAGAGAGGCGTCAATAA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR TCA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGGCTGGTAAAAATACTTaGTGTGTAGCACTAACTACT +
Preference number: 4 (lower is better)
Translates to: SVQISVSMISVCLVCKDKAGKNT*CVALTT
Trigger: AGTAGTTAGTGCTACACATCAAGTATTTTTACCAGC...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR TCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAAAATCTCAGTCTCAATaGTTAGTGTCTGTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKKSQSQ*LVSVLS
Trigger: AGACAAGACAGACACTAATCATTGAGACTGAGATTT...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR GCA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAATTATATGCATCTAAGTaGTGGGGAGGTTTAAATAGC +
Preference number: 4 (lower is better)
Translates to: LDSVQISVSMISVCLVCKLYASK*WGGLNS
Trigger: GCTATTTAAACCTCCCCAGCACTTAGATGCATATAA...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCTGATGATATTTGTCTaGATCATCAATGTATCCCAT +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQILMIFV*IINVSH
Trigger: ATGGGATACATTGATGATCCAGACAAATATCATCAG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAATCTCTGGATTACTCTaGAAACACAGGTATAATTTC +
Preference number: 4 (lower is better)
Translates to: STLFYFELHDCRDNCQIPISGLL*KHRYNF
Trigger: GAAATTATACCTGTGTTTCCAGAGTAATCCAGAGAT...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CCA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTATCTCTGGATTACTCTaGAAACACAGGTATAATTTC +
Preference number: 4 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIISGLL*KHRYNF
Trigger: GAAATTATACCTGTGTTTCCAGAGTAATCCAGAGAT...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
3UTR CAA 72 bp TTAAAAGGAATGAGTATGGGAGTTTTATGCCCTATTTaGGACTCAGTCCAAATCTCAGTCTCAATGATTAGT +
Preference number: 4 (lower is better)
Translates to: LKGMSMGVLCPI*DSVQISVSMIS
Trigger: ACTAATCATTGAGACTGAGATTTGGACTGAGTCCAAAATAGGGCATAAAACTCCCATACTCATTCCTTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS GCA 90 bp CCACTGCAGCCGCCGACGCCTCCCCAGGGAGCCCTGGCCGCGCACTaGTTCCTAAGGCCACGGGATCCTGTGGCGACAGCGAGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: PLQPPTPPQGALAAH*FLRPRDPVATASPQ
Trigger: CTGCGGGCTCGCTGTCGCCACAGGATCCCGTGGCCTTAGGAAGCAGTGCGCGGCCAGGGCTCCCTGGGGAGGCGTCGGCGGCTGCAGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS TCA 90 bp TCCTCTAGGCCTCAGGGGACACAGCGCACCTCCACAGCCCCGGCCTaGCCACGTCCTGCCTCCCGACTTAGAGACAAGGAGTACGCTCCA +
Preference number: 5 (lower is better)
Translates to: SSRPQGTQRTSTAPA*PRPASRLRDKEYAP
Trigger: TGGAGCGTACTCCTTGTCTCTAAGTCGGGAGGCAGGACGTGGTCAGGCCGGGGCTGTGGAGGTGCGCTGTGTCCCCTGAGGCCTAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS GCA 90 bp GCCACTTCCGGCGCCCAGCCGAAGTACTGCCCGCCGTTCCTCTGTTaGAGCTACCTCGTCATCGTCCTCATCCGAATCACTGAGAAATGG +
Preference number: 5 (lower is better)
Translates to: ATSGAQPKYCPPFLC*SYLVIVLIRITEKW
Trigger: CCATTTCTCAGTGATTCGGATGAGGACGATGACGAGGTAGCTGCAACAGAGGAACGGCGGGCAGTACTTCGGCTGGGCGCCGGAAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGAACTCTCCCAGCCTGTaGTACCCTCTTGTTCTAGCT +
Preference number: 5 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRNSPSL*YPLVLA
Trigger: AGCTAGAACAAGAGGGTACAACAGGCTGGGAGAGTT...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS TCA 90 bp GTTCCTCTGTTGCAGCTACCTCGTCATCGTCCTCATCCGAATCACTaGGAAATGGATTCACGCCGCCACCACTGCCACTACCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: VPLLQLPRHRPHPNH*EMDSRRHHCHYLQA
Trigger: CGCCTGGAGGTAGTGGCAGTGGTGGCGGCGTGAATCCATTTCTCAGTGATTCGGATGAGGACGATGACGAGGTAGCTGCAACAGAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS-3UTR CAA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCATGCTCCCAGCTCGATaGAGCTGTCCCCCGCCCGAC +
Preference number: 5 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGMLPAR*SCPPPD
Trigger: GTCGGGCGGGGGACAGCTCAATCGAGCTGGGAGCAT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGCTGGTAGTCATAAAGTaGCAGCAGCACTGCCAATTG +
Preference number: 5 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRLVVIK*QQHCQL
Trigger: CAATTGGCAGTGCTGCTGCAACTTTATGACTACCAG...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CAA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCCGGCGGGGTTCCACTTaGCCTCTCGAAGTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGRRGST*PLEVAW
Trigger: CCAGGCAACTTCGAGAGGCAAAGTGGAACCCCGCCG...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGCTTCACTCACTAAGCTaGCAGCAATTGACATTGAGC +
Preference number: 5 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRLHSLS*QQLTLS
Trigger: GCTCAATGTCAATTGCTGCAAGCTTAGTGAGTGAAG...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CAA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGGCGGTCAGCAAGTATaGATCGCGCAACAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGGGQQV*IAQQLS
Trigger: GCTCAGCTGTTGCGCGATCAATACTTGCTGACCGCC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACATGCTCCCAGCTCGATaGAGCTGTCCCCCGCCCGAC +
Preference number: 5 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYMLPAR*SCPPPD
Trigger: GTCGGGCGGGGGACAGCTCAATCGAGCTGGGAGCAT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGGCTGGAGTGCAGTGGTGCAATAGCGGCCCACTGCAATCTCCGCTTCCCAGGTGTATGCAAAGAATGTaGGTCTTGATACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: QAGVQWCNSGPLQSPLPRCMQRM*VLILRI
Trigger: GATCCTCAGTATCAAGACCAACATTCTTTGCATACA...CCTGGGAAGCGGAGATTGCAGTGGGCCGCTATTGCACCACTGCACTCCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CAA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCGGCGGGGTTCCACTTaGCCTCTCGAAGTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYRRGST*PLEVAW
Trigger: CCAGGCAACTTCGAGAGGCAAAGTGGAACCCCGCCG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCCCCGCCGTTCCTCTGTaGCAGCTACCTCGTCATCGT +
Preference number: 5 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFPAVPL*QLPRHR
Trigger: ACGATGACGAGGTAGCTGCAACAGAGGAACGGCGGG...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCCCGCCGTTCCTCTGTaGCAGCTACCTCGTCATCGT +
Preference number: 5 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYPAVPL*QLPRHR
Trigger: ACGATGACGAGGTAGCTGCAACAGAGGAACGGCGGG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTATGCTCCCAGCTCGATaGAGCTGTCCCCCGCCCGAC +
Preference number: 5 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIMLPAR*SCPPPD
Trigger: GTCGGGCGGGGGACAGCTCAATCGAGCTGGGAGCAT...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAATAGTGGACACATCTaGAAGAGGCGACATAGGCCG +
Preference number: 5 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGNSGHI*KRRHRP
Trigger: CGGCCTATGTCGCCTCTTCAAGATGTGTCCACTATT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS TCA 90 bp ATTTCAGGGTCACTGGAGAGAGTAATGAGAGCAGGAACAACCCTCTaGGCTACCAGAGTTTCATTCACCCCCTTCACCAACAGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: ISGSLERVMRAGTTL*ATRVSFTPFTNSSN
Trigger: GTTTGAGCTGTTGGTGAAGGGGGTGAATGAAACTCTGGTAGCTCAGAGGGTTGTTCCTGCTCTCATTACTCTCTCCAGTGACCCTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000256858.10
ENST00000644646.2
CDS-3UTR CAA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCCGCCGTTCCTCTGTaGCAGCTACCTCGTCATCGT +
Preference number: 5 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIPAVPL*QLPRHR
Trigger: ACGATGACGAGGTAGCTGCAACAGAGGAACGGCGGG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAGGCGGTCAGCAAGTATaGATCGCGCAACAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQGGQQV*IAQQLS
Trigger: GCTCAGCTGTTGCGCGATCAATACTTGCTGACCGCC...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTGGCGGTCAGCAAGTATaGATCGCGCAACAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTGGQQV*IAQQLS
Trigger: GCTCAGCTGTTGCGCGATCAATACTTGCTGACCGCC...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAACGGCGGGGTTCCACTTaGCCTCTCGAAGTTGCCTGG +
Preference number: 5 (lower is better)
Translates to: LDSVQISVSMISVCLVCKRRGST*PLEVAW
Trigger: CCAGGCAACTTCGAGAGGCAAAGTGGAACCCCGCCG...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCCTAAGCTTGCAGCAATaGACATTGAGCCTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGLSLQQ*TLSLEA
Trigger: AGCCTCAAGGCTCAATGTCAATTGCTGCAAGCTTAG...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTTGGTCAGGCTAGTCTaGAACTCCCGGCCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYLVRLV*NSRPQV
Trigger: CACTTGAGGCCGGGAGTTCAAGACTAGCCTGACCAA...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS TCA 90 bp AGCACTGCCAATTGCTCACGACTTCCGATAATAGTGGACACATCTTaGAGAGGCGACATAGGCCGAGGAAACCTAGTCACTTCTATCTGT +
Preference number: 5 (lower is better)
Translates to: STANCSRLPIIVDTS*RGDIGRGNLVTSIC
Trigger: ACAGATAGAAGTGACTAGGTTTCCTCGGCCTATGTCGCCTCTTCAAGATGTGTCCACTATTATCGGAAGTCGTGAGCAATTGGCAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000588446.1
ENST00000644646.2
CDS TCA 90 bp ATTTCAGGGTCACTGGAGAGAGTAATGAGAGCAGGAACAACCCTCTaGGCTACCAGAGTTTCATTCACCCCCTTCACCAACAGCCTATTA +
Preference number: 5 (lower is better)
Translates to: ISGSLERVMRAGTTL*ATRVSFTPFTNSLL
Trigger: TAATAGGCTGTTGGTGAAGGGGGTGAATGAAACTCTGGTAGCTCAGAGGGTTGTTCCTGCTCTCATTACTCTCTCCAGTGACCCTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587764.5
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACAGCGATCGCATCAATaGATAATCGGGCCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQQRSHQ*IIGPGS
Trigger: AGACCCCGGCCCGATTATCAATTGATGCGATCGCTG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCAGCTTCTACACGTGTaGGTCCAACATGACGCGCAA +
Preference number: 5 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYQLLHV*VQHDAQ
Trigger: TTGCGCGTCATGTTGGACCAACACGTGTAGAAGCTG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS TCA 90 bp ATAGGCCGAGGAAACCTAGTCACTTCTATCTGTGGCACTTCACCATaGAGCTTGGCTTTGCTGGAGAAAGGTGCATTCTGTAGCACTAAT +
Preference number: 5 (lower is better)
Translates to: IGRGNLVTSICGTSP*SLALLEKGAFCSTN
Trigger: ATTAGTGCTACAGAATGCACCTTTCTCCAGCAAAGCCAAGCTTCATGGTGAAGTGCCACAGATAGAAGTGACTAGGTTTCCTCGGCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACAGCGATCGCATCAATaGATAATCGGGCCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPQRSHQ*IIGPGS
Trigger: AGACCCCGGCCCGATTATCAATTGATGCGATCGCTG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCAGAGTTGGAGGAAGGTaGCTTATAATTGGTGTAAGG +
Preference number: 5 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGRVGGR*LIIGVR
Trigger: CCTTACACCAATTATAAGCAACCTTCCTCCAACTCT...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCAGCTTCTACACGTGTaGGTCCAACATGACGCGCAA +
Preference number: 5 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTQLLHV*VQHDAQ
Trigger: TTGCGCGTCATGTTGGACCAACACGTGTAGAAGCTG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACAGCTTCTACACGTGTaGGTCCAACATGACGCGCAA +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQQLLHV*VQHDAQ
Trigger: TTGCGCGTCATGTTGGACCAACACGTGTAGAAGCTG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCAATAGTGGACACATCTaGAAGAGGCGACATAGGCCG +
Preference number: 5 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFNSGHI*KRRHRP
Trigger: CGGCCTATGTCGCCTCTTCAAGATGTGTCCACTATT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGCCGGAGCAACCCGCTaGTCAACTAACGCTTCACTC +
Preference number: 5 (lower is better)
Translates to: LDSVQISVSMISVCLVCKAGATR*STNASL
Trigger: GAGTGAAGCGTTAGTTGACAAGCGGGTTGCTCCGGC...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398130.6
CDS-3UTR CAA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCAGCAGCACTGCCAATaGCTCACGACTTCCGATAAT +
Preference number: 5 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTQQHCQ*LTTSDN
Trigger: ATTATCGGAAGTCGTGAGCAATTGGCAGTGCTGCTG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTAACTCTCCCAGCCTGTaGTACCCTCTTGTTCTAGCT +
Preference number: 5 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTNSPSL*YPLVLA
Trigger: AGCTAGAACAAGAGGGTACAACAGGCTGGGAGAGTT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCTGTATGCAAAGAATGTaGGTCTTGATACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGCMQRM*VLILRI
Trigger: GATCCTCAGTATCAAGACCAACATTCTTTGCATACA...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCTCCACAATCTGTAAGTaGTTCACCAAGGCTAACTTA +
Preference number: 5 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGSTICK*FTKANL
Trigger: TAAGTTAGCCTTGGTGAACAACTTACAGATTGTGGA...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACTGGGGGCGTCAACTGGCCCATTTaGTTCAAAAACTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: FKYKEPVGLRSILVFTGGVNWPI*FKNLVF
Trigger: AAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGAC...GCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCACATGGCACCTGATGTaGTCAACTGGCCCATTTTGT +
Preference number: 5 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFTWHLM*STGPFC
Trigger: ACAAAATGGGCCAGTTGACAACATCAGGTGCCATGT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCAAGGAACCAGTCGGCTaGAGGTCCATCTTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFKEPVG*RSILVF
Trigger: AAACACTAAGATGGACCTCAAGCCGACTGGTTCCTT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACAAGGAACCAGTCGGCTaGAGGTCCATCTTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYKEPVG*RSILVF
Trigger: AAACACTAAGATGGACCTCAAGCCGACTGGTTCCTT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTGACGGTTTCACCATGTaGGTCAGGCTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTDGFTM*VRLVLN
Trigger: GTTCAAGACTAGCCTGACCAACATGGTGAAACCGTC...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAGATGAGATGTGCCACTaGGAGACTGTGATCACAGTG +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQDEMCH*ETVITV
Trigger: CACTGTGATCACAGTCTCCAAGTGGCACATCTCATC...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATTTGCCAATAGCACATaGGGAACAATGTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQFANST*GTMCGR
Trigger: CCTGCCACACATTGTTCCCAATGTGCTATTGGCAAA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCTCAACTCCTCTCTCTTaGCCAATAGCACATTGGGAA +
Preference number: 5 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFSTPLS*PIAHWE
Trigger: TTCCCAATGTGCTATTGGCAAAGAGAGAGGAGTTGA...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCAGTATCATTTGCCTTaGCTCATCATCTGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYQYHLP*LIIWPL
Trigger: AAGAGGCCAGATGATGAGCAAAGGCAAATGATACTG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCAGCAGCACTGCCAATaGCTCACGACTTCCGATAAT +
Preference number: 5 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIQQHCQ*LTTSDN
Trigger: ATTATCGGAAGTCGTGAGCAATTGGCAGTGCTGCTG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTCTAAGCTTGCAGCAATaGACATTGAGCCTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTLSLQQ*TLSLEA
Trigger: AGCCTCAAGGCTCAATGTCAATTGCTGCAAGCTTAG...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTACATGGCACCTGATGTaGTCAACTGGCCCATTTTGT +
Preference number: 5 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTTWHLM*STGPFC
Trigger: ACAAAATGGGCCAGTTGACAACATCAGGTGCCATGT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS GCA 90 bp GACAGGCTAATTCTAAAACTGACACTCATCTCGGAACCTGGGTTCTaGGTTAGGGCCAACTCTACCAAATGTTTTTATGATCTCTGTATG +
Preference number: 5 (lower is better)
Translates to: DRLILKLTLISEPGF*VRANSTKCFYDLCM
Trigger: CATACAGAGATCATAAAAACATTTGGTAGAGTTGGCCCTAACGCAGAACCCAGGTTCCGAGATGAGTGTCAGTTTTAGAATTAGCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593217.1
CDS-3UTR CAA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACAGAGTTGGAGGAAGGTaGCTTATAATTGGTGTAAGG +
Preference number: 5 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYRVGGR*LIIGVR
Trigger: CCTTACACCAATTATAAGCAACCTTCCTCCAACTCT...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATTTGCCAATAGCACATaGGGAACAATGTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPFANST*GTMCGR
Trigger: CCTGCCACACATTGTTCCCAATGTGCTATTGGCAAA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATCAACTCCTCTCTCTTaGCCAATAGCACATTGGGAA +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQSTPLS*PIAHWE
Trigger: TTCCCAATGTGCTATTGGCAAAGAGAGAGGAGTTGA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACAGTATCATTTGCCTTaGCTCATCATCTGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQQYHLP*LIIWPL
Trigger: AAGAGGCCAGATGATGAGCAAAGGCAAATGATACTG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACTGGTAGTCATAAAGTaGCAGCAGCACTGCCAATTG +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPLVVIK*QQHCQL
Trigger: CAATTGGCAGTGCTGCTGCAACTTTATGACTACCAG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAAACTCTCCCAGCCTGTaGTACCCTCTTGTTCTAGCT +
Preference number: 5 (lower is better)
Translates to: LDSVQISVSMISVCLVCKNSPSL*YPLVLA
Trigger: AGCTAGAACAAGAGGGTACAACAGGCTGGGAGAGTT...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACCTTTTCTACTTCGAGTaGCATGACTGTAGAGACAAC +
Preference number: 5 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYLFYFE*HDCRDN
Trigger: GTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAG...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS TCA 90 bp GCACCCAATTCCACAAAAGAAGCCTTCAGGCTATCAAGAGGAGCATaGGATAATGAAAGCAGCGTCATTACATCTTCTAAGAATCCAACT +
Preference number: 5 (lower is better)
Translates to: APNSTKEAFRLSRGA*DNESSVITSSKNPT
Trigger: AGTTGGATTCTTAGAAGATGTAATGACGCTGCTTTCATTATCTCATGCTCCTCTTGATAGCCTGAAGGCTTCTTTTGTGGAATTGGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000588446.1
ENST00000644646.2
CDS GCA 90 bp ATGCAAATACTCCTTTATCTGAATATAACACGTAAGGACTCCTGTTaGATAAATGGGGACTGTAGCTTTAGTGAGGACCCCATTTCCTGC +
Preference number: 5 (lower is better)
Translates to: MQILLYLNITRKDSC*INGDCSFSEDPISC
Trigger: GCAGGAAATGGGGTCCTCACTAAAGCTACAGTCCCCATTTATGCAACAGGAGTCCTTACGTGTTATATTCAGATAAAGGAGTATTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256858.10
CDS-3UTR CAA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCCAGCTTCATCTGATATaGAAAGATGGATGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFQLHLI*KDGCLC
Trigger: ACACAGACATCCATCTTTCAATATCAGATGAAGCTG...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TTGGACTCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAATTTGCCAATAGCACATaGGGAACAATGTGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LDSVQISVSMISVCLVCKFANST*GTMCGR
Trigger: CCTGCCACACATTGTTCCCAATGTGCTATTGGCAAA...TTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGAGTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCACATTTGTTGCAACATaGAAAGAACCAAGGAGCTAC +
Preference number: 5 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFTFVAT*KEPRSY
Trigger: GTAGCTCCTTGGTTCTTTCAATGTTGCAACAAATGT...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCGTGTTTGTAAAAATTTaGCCAAATGTCCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFVFVKI*PNVRQR
Trigger: CCTTTGCCGGACATTTGGCAAAATTTTTACAAACAC...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAAGTACTTCAAGTACAAGGAACCAGTCGGCTTGAGGTCCATCTTAGTGTTTACGTGTTTGTAAAAATTTaGCCAAATGTCCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: QVLQVQGTSRLEVHLSVYVFVKI*PNVRQR
Trigger: CCTTTGCCGGACATTTGGCAAAATTTTTACAAACAC...GTAAACACTAAGATGGACCTCAAGCCGACTGGTTCCTTGTACTTGAAGTACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACAAAGAATGTTGGTCTaGATACTGAGGATCTTCCAG +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQQRMLV*ILRIFQ
Trigger: CTGGAAGATCCTCAGTATCAAGACCAACATTCTTTG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCTTCACTCACTAAGCTaGCAGCAATTGACATTGAGC +
Preference number: 5 (lower is better)
Translates to: SSTLFYFELHDCRDNCQILHSLS*QQLTLS
Trigger: GCTCAATGTCAATTGCTGCAAGCTTAGTGAGTGAAG...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACTTCACTCACTAAGCTaGCAGCAATTGACATTGAGC +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPLHSLS*QQLTLS
Trigger: GCTCAATGTCAATTGCTGCAAGCTTAGTGAGTGAAG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp CAGTTTGTAAAATTCACCTTGGTTACCTCTCCCCATGCCTATGTGCTGTCTTTCGTCAACTGGCCCATTTaGTTCAAAAACTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: QFVKFTLVTSPHAYVLSFVNWPI*FKNLVF
Trigger: AAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGAC...GAAAGACAGCACATAGGCATGGGGAGAGGTAACCAAGGTGAATTTTACAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGACATGGCACCTGATGTaGTCAACTGGCCCATTTTGT +
Preference number: 5 (lower is better)
Translates to: SVQISVSMISVCLVCKDKTWHLM*STGPFC
Trigger: ACAAAATGGGCCAGTTGACAACATCAGGTGCCATGT...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAACTTTTCTACTTCGAGTaGCATGACTGTAGAGACAAC +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQLFYFE*HDCRDN
Trigger: GTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAG...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS TCA 90 bp CTGCTTCTACTTCTTTCTCTGAAATACATTGGCCAACATGGCACCTaGTGTTGTCAACTGGCCCATTTTGTTCAAAAACTTGGTCTTTGT +
Preference number: 5 (lower is better)
Translates to: LLLLLSLKYIGQHGT*CCQLAHFVQKLGLC
Trigger: ACAAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGACAACATCAGGTGCCATGTTGGCCAATGTATTTCAGAGAAAGAAGTAGAAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS GCA 90 bp CTTATGCAAATGTGGTATAACAAACTCATCTCGGAACCTGGGTTCTaGGTTAGGGCCAACTCTACCAAATGTTTTTATGATCTCTGTATG +
Preference number: 5 (lower is better)
Translates to: LMQMWYNKLISEPGF*VRANSTKCFYDLCM
Trigger: CATACAGAGATCATAAAAACATTTGGTAGAGTTGGCCCTAACGCAGAACCCAGGTTCCGAGATGAGTTTGTTATACCACATTTGCATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587764.5
ENST00000644646.2
CDS CCA 90 bp ACATGGCACCTGATGTTGTCAACTGGCCCATTTTGTTCAAAAACTTaGTCTTTGTATCTTCACTCACTAAGCTTGCAGCAATTGACATTG +
Preference number: 5 (lower is better)
Translates to: TWHLMLSTGPFCSKT*SLYLHSLSLQQLTL
Trigger: CAATGTCAATTGCTGCAAGCTTAGTGAGTGAAGATACAAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGACAACATCAGGTGCCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATCCACAATCTGTAAGTaGTTCACCAAGGCTAACTTA +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQSTICK*FTKANL
Trigger: TAAGTTAGCCTTGGTGAACAACTTACAGATTGTGGA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAGTTTTATGCCCTATTTaGGACTCAGTCCAAATCTCA +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQVLCPI*DSVQIS
Trigger: TGAGATTTGGACTGAGTCCAAAATAGGGCATAAAAC...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATCTTTTCCAGTTACTaGATGATTTCCAAAATCCCG +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQIFSSY*MISKIP
Trigger: CGGGATTTTGGAAATCATCAAGTAACTGGAAAAGAT...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGGAACTGTACACTGACTATCTTTTCCAGTTACTaGATGATTTCCAAAATCCCG +
Preference number: 5 (lower is better)
Translates to: SCMTVETTVKFQWNCTLTIFSSY*MISKIP
Trigger: CGGGATTTTGGAAATCATCAAGTAACTGGAAAAGAT...AGTCAGTGTACAGTTCCACTGGAATTTGACAGTTGTCTCTACAGTCATGCAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGAGAGTTGGAGGAAGGTaGCTTATAATTGGTGTAAGG +
Preference number: 5 (lower is better)
Translates to: SVQISVSMISVCLVCKDKRVGGR*LIIGVR
Trigger: CCTTACACCAATTATAAGCAACCTTCCTCCAACTCT...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCACAGCTTCATCTGATATaGAAAGATGGATGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPQLHLI*KDGCLC
Trigger: ACACAGACATCCATCTTTCAATATCAGATGAAGCTG...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAACATTTGTTGCAACATaGAAAGAACCAAGGAGCTAC +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPTFVAT*KEPRSY
Trigger: GTAGCTCCTTGGTTCTTTCAATGTTGCAACAAATGT...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAGTGTTTGTAAAAATTTaGCCAAATGTCCGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPVFVKI*PNVRQR
Trigger: CCTTTGCCGGACATTTGGCAAAATTTTTACAAACAC...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATGTATGCAAAGAATGTaGGTCTTGATACTGAGGATC +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPCMQRM*VLILRI
Trigger: GATCCTCAGTATCAAGACCAACATTCTTTGCATACA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATCCACAATCTGTAAGTaGTTCACCAAGGCTAACTTA +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPSTICK*FTKANL
Trigger: TAAGTTAGCCTTGGTGAACAACTTACAGATTGTGGA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp ATGTCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAATCAAAAACTTGGTCTTaGTATCTTCACTCACTAAGC +
Preference number: 5 (lower is better)
Translates to: MSSTLFYFELHDCRDNCQSKTWS*YLHSLS
Trigger: GCTTAGTGAGTGAAGATACAAAGACCAAGTTTTTGA...TTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTGTCAACTGGCCCATTTaGTTCAAAAACTTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIVNWPI*FKNLVF
Trigger: AAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGAC...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTGTTTTATGCCCTATTTaGGACTCAGTCCAAATCTCA +
Preference number: 5 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIVLCPI*DSVQIS
Trigger: TGAGATTTGGACTGAGTCCAAAATAGGGCATAAAAC...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCAACATTTCCAGCTTCATaGAAGATGCATGTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPTFPAS*KMHVLK
Trigger: TTTCAGGACATGCATCTTCAATGAAGCTGGAAATGT...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS GCA 90 bp ACAGCTTCTCTTACCAAATCTGCCTTATCTTCCATTAACATTTGTTaGAACATTGAAAGAACCAAGGAGCTACGGATTTCTTTAGGAAGG +
Preference number: 5 (lower is better)
Translates to: TASLTKSALSSINIC*NIERTKELRISLGR
Trigger: CCTTCCTAAAGAAATCCGTAGCTCCTTGGTTCTTTCAATGTTGCAACAAATGTTAATGGAAGATAAGGCAGATTTGGTAAGAGAAGCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS-3UTR CAA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGCAGCTTCATCTGATATaGAAAGATGGATGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: SVQISVSMISVCLVCKDKQLHLI*KDGCLC
Trigger: ACACAGACATCCATCTTTCAATATCAGATGAAGCTG...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TCCAGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTTATATGAAACACATTTaGTGTTTAGACTTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: SSTLFYFELHDCRDNCQIYMKHI*CLDLGP
Trigger: GGGACCCAAGTCTAAACACAAAATGTGTTTCATATA...AATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256858.10
CDS-3UTR CAA 90 bp AGCACTCTTTTCTACTTCGAGTTGCATGACTGTAGAGACAACTGTCAAATTCCATCAAAAACTTGGTCTTaGTATCTTCACTCACTAAGC +
Preference number: 5 (lower is better)
Translates to: STLFYFELHDCRDNCQIPSKTWS*YLHSLS
Trigger: GCTTAGTGAGTGAAGATACAAAGACCAAGTTTTTGA...TGGAATTTGACAGTTGTCTCTACAGTCATGCAACTCGAAGTAGAAAAGAGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS-3UTR CAA 90 bp TCAGTCCAAATCTCAGTCTCAATGATTAGTGTCTGTCTTGTCTGTAAAGACAAGAATTTCCCAGATTTATaGACGCCTCTCTGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: SVQISVSMISVCLVCKDKNFPDL*TPLWRK
Trigger: TTTTCTCCAGAGAGGCGTCAATAAATCTGGGAAATT...CTTGTCTTTACAGACAAGACAGACACTAATCATTGAGACTGAGATTTGGACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644646.2
CDS TCA 90 bp AGATGTTCCATGTCAGTCCGTAAACATCTGAGACCAGGTAAAAAGTaGTTAACCATTAAATCCTCTGAAATGAAACAACAGGAAAGTGCA +
Preference number: 5 (lower is better)
Translates to: RCSMSVRKHLRPGKK*LTIKSSEMKQQESA
Trigger: TGCACTTTCCTGTTGTTTCATTTCAGAGGATTTAATGGTTAATCACTTTTTACCTGGTCTCAGATGTTTACGGACTGACATGGAACATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587198.1
ENST00000587764.5
ENST00000644646.2
CDS GCA 72 bp CCGCCGACGCCTCCCCAGGGAGCCCTGGCCGCGCACTaGTTCCTAAGGCCACGGGATCCTGTGGCGACAGCG +
Preference number: 6 (lower is better)
Translates to: PPTPPQGALAAH*FLRPRDPVATA
Trigger: CGCTGTCGCCACAGGATCCCGTGGCCTTAGGAAGCAGTGCGCGGCCAGGGCTCCCTGGGGAGGCGTCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS TCA 72 bp CCTCAGGGGACACAGCGCACCTCCACAGCCCCGGCCTaGCCACGTCCTGCCTCCCGACTTAGAGACAAGGAG +
Preference number: 6 (lower is better)
Translates to: PQGTQRTSTAPA*PRPASRLRDKE
Trigger: CTCCTTGTCTCTAAGTCGGGAGGCAGGACGTGGTCAGGCCGGGGCTGTGGAGGTGCGCTGTGTCCCCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS TCA 72 bp ACGCTCCAAGGCAGGAGATCCGGATGCAGCTGCACCTaGTGCCTCAGCCTCTGCTGCACCAGCAGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: TLQGRRSGCSCT*CLSLCCTSSPA
Trigger: AGCCGGGCTGCTGGTGCAGCAGAGGCTGAGGCATCAGGTGCAGCTGCATCCGGATCTCCTGCCTTGGAGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS CCA 72 bp CCCCGGCGGGGTTCCACTTTGCCTCTCGAAGTTGCCTaGATTGGAGAAGTAGTCGCGCAGCCGAGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: PRRGSTLPLEVA*IGEVVAQPRQL
Trigger: GAGCTGCCTCGGCTGCGCGACTACTTCTCCAATCCAGGCAACTTCGAGAGGCAAAGTGGAACCCCGCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS GCA 72 bp CCATCCCCGGCGGGGTTCCACTTTGCCTCTCGAAGTTaGCTGGATTGGAGAAGTAGTCGCGCAGCCGAGGCA +
Preference number: 6 (lower is better)
Translates to: PSPAGFHFASRS*LDWRSSRAAEA
Trigger: TGCCTCGGCTGCGCGACTACTTCTCCAATCCAGGCAACTTCGAGAGGCAAAGTGGAACCCCGCCGGGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS CAA 72 bp CGGCGCCCAGCCGAAGTACTGCCCGCCGTTCCTCTGTaGCAGCTACCTCGTCATCGTCCTCATCCGAATCAC +
Preference number: 6 (lower is better)
Translates to: RRPAEVLPAVPL*QLPRHRPHPNH
Trigger: GTGATTCGGATGAGGACGATGACGAGGTAGCTGCAACAGAGGAACGGCGGGCAGTACTTCGGCTGGGCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS GCA 72 bp GGCGCCCAGCCGAAGTACTGCCCGCCGTTCCTCTGTTaGAGCTACCTCGTCATCGTCCTCATCCGAATCACT +
Preference number: 6 (lower is better)
Translates to: GAQPKYCPPFLC*SYLVIVLIRIT
Trigger: AGTGATTCGGATGAGGACGATGACGAGGTAGCTGCAACAGAGGAACGGCGGGCAGTACTTCGGCTGGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS CAA 72 bp CAGCTCGGTATGCAGCTCCAGGGCGGTCAGCAAGTATaGATCGCGCAACAGCTGAGCAGCGATCGCATCAAT +
Preference number: 6 (lower is better)
Translates to: QLGMQLQGGQQV*IAQQLSSDRIN
Trigger: ATTGATGCGATCGCTGCTCAGCTGTTGCGCGATCAATACTTGCTGACCGCCCTGGAGCTGCATACCGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS CCA 72 bp TTGTCAGGTTGGCTCGGAGGGCCTGAATGGTCTCCTTaGCTTTCCGTAGTTCAAACTCCAGGACTGGACAGG +
Preference number: 6 (lower is better)
Translates to: LSGWLGGPEWSP*LSVVQTPGLDR
Trigger: CCTGTCCAGTCCTGGAGTTTGAACTACGGAAAGCCAAGGAGACCATTCAGGCCCTCCGAGCCAACCTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590713.1
CDS CAA 90 bp GTGCACCACAGCCTCAAACACTTGGACTCAAGTGATCTTCCTGCCTaGGCCTCCCGAGTTGATGGACTACAGATACGTGCCACCATGCCT +
Preference number: 6 (lower is better)
Translates to: VHHSLKHLDSSDLPA*ASRVDGLQIRATMP
Trigger: AGGCATGGTGGCACGTATCTGTAGTCCATCAACTCGGGAGGCCAAGGCAGGAAGATCACTTGAGTCCAAGTGTTTGAGGCTGTGGTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593217.1
CDS TCA 72 bp TTGCAGCTACCTCGTCATCGTCCTCATCCGAATCACTaGGAAATGGATTCACGCCGCCACCACTGCCACTAC +
Preference number: 6 (lower is better)
Translates to: LQLPRHRPHPNH*EMDSRRHHCHY
Trigger: GTAGTGGCAGTGGTGGCGGCGTGAATCCATTTCTCAGTGATTCGGATGAGGACGATGACGAGGTAGCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS CCA 72 bp TTGTCAGGTTGGCTCGGAGGGCCTGAATGGTCTCCTTaGCTTTCCGTAGTTCAAACTCCAGGACTGCCACTT +
Preference number: 6 (lower is better)
Translates to: LSGWLGGPEWSP*LSVVQTPGLPL
Trigger: AAGTGGCAGTCCTGGAGTTTGAACTACGGAAAGCCAAGGAGACCATTCAGGCCCTCCGAGCCAACCTGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS CAA 72 bp TCACTGGACAAGGTAACAAGGGCCGGAGCAACCCGCTaGTCAACTAACGCTTCACTCATGCCTCGAAGAGTC +
Preference number: 6 (lower is better)
Translates to: SLDKVTRAGATR*STNASLMPRRV
Trigger: GACTCTTCGAGGCATGAGTGAAGCGTTAGTTGACAAGCGGGTTGCTCCGGCCCTTGTTACCTTGTCCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398130.6
ENST00000587198.1
ENST00000587764.5
CDS CCA 72 bp GGGGGATCAACTCCTCTCTCTTTGCCAATAGCACATTaGGAACAATGTGTGGCAGGCAGCGTCCCAGCATTA +
Preference number: 6 (lower is better)
Translates to: GGSTPLSLPIAH*EQCVAGSVPAL
Trigger: TAATGCTGGGACGCTGCCTGCCACACATTGTTCCCAATGTGCTATTGGCAAAGAGAGAGGAGTTGATCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000591227.1
ENST00000644646.2
CDS CAA 72 bp AGCCTCAAACACTTGGACTCAAGTGATCTTCCTGCCTaGGCCTCCCGAGTTGATGGACTACAGATACGTGCC +
Preference number: 6 (lower is better)
Translates to: SLKHLDSSDLPA*ASRVDGLQIRA
Trigger: GGCACGTATCTGTAGTCCATCAACTCGGGAGGCCAAGGCAGGAAGATCACTTGAGTCCAAGTGTTTGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593217.1
CDS CAA 90 bp AATTCAGGATCACTGGACAAGGTAACAAGGGCCGGAGCAACCCGCTaGTCAACTAACGCTTCACTCATGCCTCGAAGAGTCAGCTCAAAC +
Preference number: 6 (lower is better)
Translates to: NSGSLDKVTRAGATR*STNASLMPRRVSSN
Trigger: GTTTGAGCTGACTCTTCGAGGCATGAGTGAAGCGTTAGTTGACAAGCGGGTTGCTCCGGCCCTTGTTACCTTGTCCAGTGATCCTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398130.6
CDS CAA 90 bp AATTCAGGATCACTGGACAAGGTAACAAGGGCCGGAGCAACCCGCTaGTCAACTAACGCTTCACTCATGCCTCGAAGAGTCAGCTGTAAA +
Preference number: 6 (lower is better)
Translates to: NSGSLDKVTRAGATR*STNASLMPRRVSCK
Trigger: TTTACAGCTGACTCTTCGAGGCATGAGTGAAGCGTTAGTTGACAAGCGGGTTGCTCCGGCCCTTGTTACCTTGTCCAGTGATCCTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587198.1
CDS CAA 90 bp AATTCAGGATCACTGGACAAGGTAACAAGGGCCGGAGCAACCCGCTaGTCAACTAACGCTTCACTCATGCCTCGAAGAGTCAGATTTCAG +
Preference number: 6 (lower is better)
Translates to: NSGSLDKVTRAGATR*STNASLMPRRVRFQ
Trigger: CTGAAATCTGACTCTTCGAGGCATGAGTGAAGCGTTAGTTGACAAGCGGGTTGCTCCGGCCCTTGTTACCTTGTCCAGTGATCCTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587764.5
CDS TCA 72 bp TCACTGGAGAGAGTAATGAGAGCAGGAACAACCCTCTaGGCTACCAGAGTTTCATTCACCCCCTTCACCAAC +
Preference number: 6 (lower is better)
Translates to: SLERVMRAGTTL*ATRVSFTPFTN
Trigger: GTTGGTGAAGGGGGTGAATGAAACTCTGGTAGCTCAGAGGGTTGTTCCTGCTCTCATTACTCTCTCCAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000587764.5
ENST00000644646.2
CDS CCA 72 bp CATGGAGTTCTCTGCAGGCTGGGGAGTTTCAAGAGTTaGAGGAAGGTTGCTTATAATTGGTGTAAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: HGVLCRLGSFKS*RKVAYNWCKGL
Trigger: GAGGCCCTTACACCAATTATAAGCAACCTTCCTCCAACTCTTGAAACTCCCCAGCCTGCAGAGAACTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS CAA 90 bp CAGCACTGCCAATTGCTCACGACTTCCGATAATAGTGGACACATCTaGAAGAGGCGACATAGGCCGAGGAAACCTAGTCACTTCTATCTG +
Preference number: 6 (lower is better)
Translates to: QHCQLLTTSDNSGHI*KRRHRPRKPSHFYL
Trigger: CAGATAGAAGTGACTAGGTTTCCTCGGCCTATGTCGCCTCTTCAAGATGTGTCCACTATTATCGGAAGTCGTGAGCAATTGGCAGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000588446.1
ENST00000644646.2
CDS GCA 72 bp AGCTTCTACACGTGTTGGTCCAACATGACGCGCAAATaGCACACAACCTGTCAGTATCATTTGCCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: SFYTCWSNMTRK*HTTCQYHLPLL
Trigger: GAGCAAAGGCAAATGATACTGACAGGTTGTGTGGCATTTGCGCGTCATGTTGGACCAACACGTGTAGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000591227.1
ENST00000644646.2
CDS CAA 72 bp CAATTGCTCACGACTTCCGATAATAGTGGACACATCTaGAAGAGGCGACATAGGCCGAGGAAACCTAGTCAC +
Preference number: 6 (lower is better)
Translates to: QLLTTSDNSGHI*KRRHRPRKPSH
Trigger: GTGACTAGGTTTCCTCGGCCTATGTCGCCTCTTCAAGATGTGTCCACTATTATCGGAAGTCGTGAGCAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000588446.1
ENST00000644646.2
CDS TCA 72 bp GGAAACCTAGTCACTTCTATCTGTGGCACTTCACCATaGAGCTTGGCTTTGCTGGAGAAAGGTGCATTCTGT +
Preference number: 6 (lower is better)
Translates to: GNLVTSICGTSP*SLALLEKGAFC
Trigger: ACAGAATGCACCTTTCTCCAGCAAAGCCAAGCTTCATGGTGAAGTGCCACAGATAGAAGTGACTAGGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000644646.2
CDS TCA 72 bp AATTGCTCACGACTTCCGATAATAGTGGACACATCTTaGAGAGGCGACATAGGCCGAGGAAACCTAGTCACT +
Preference number: 6 (lower is better)
Translates to: NCSRLPIIVDTS*RGDIGRGNLVT
Trigger: AGTGACTAGGTTTCCTCGGCCTATGTCGCCTCTTCAAGATGTGTCCACTATTATCGGAAGTCGTGAGCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000588446.1
ENST00000644646.2
CDS GCA 72 bp TGTTGCTTGGGCTGGAATGCAATGACTATTCACAGGTaGAATCATAGTGCACCACAGCCTCAAACACTTGGA +
Preference number: 6 (lower is better)
Translates to: CCLGWNAMTIHR*NHSAPQPQTLG
Trigger: TCCAAGTGTTTGAGGCTGTGGTGCACTATGATTGCACCTGTGAATAGTCATTGCATTCCAGCCCAAGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593217.1
CDS CAA 90 bp CCATCAAAGGATATGGTCAAGAGTGTAAAAAGAAAACCTCTCTCTTaGCCAATAGCACATTGGGAACAATGTGTGGCAGGCAGCGTCCCA +
Preference number: 6 (lower is better)
Translates to: PSKDMVKSVKRKPLS*PIAHWEQCVAGSVP
Trigger: TGGGACGCTGCCTGCCACACATTGTTCCCAATGTGCTATTGGCAAAGAGAGAGGTTTTCTTTTTACACTCTTGACCATATCCTTTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592479.5
CDS TCA 72 bp GGTAAAAGTTCAGCTTCTACACGTGTTGGTCCAACATaGCGCGCAAATGCCACACAACCTGTCAGTATCATT +
Preference number: 6 (lower is better)
Translates to: GKSSASTRVGPT*RANATQPVSII
Trigger: AATGATACTGACAGGTTGTGTGGCATTTGCGCGTCATGTTGGACCAACACGTGTAGAAGCTGAACTTTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000591227.1
ENST00000644646.2
CDS GCA 72 bp GTCTTCTTCCTGAATATAACACGTAAGGACTCCTGTTaGATAAATGGGGACTGTAGCTTTAGTGAGGACCCC +
Preference number: 6 (lower is better)
Translates to: VFFLNITRKDSC*INGDCSFSEDP
Trigger: GGGGTCCTCACTAAAGCTACAGTCCCCATTTATGCAACAGGAGTCCTTACGTGTTATATTCAGGAAGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398130.6
ENST00000586920.1
ENST00000587725.5
ENST00000588446.1
ENST00000644646.2
CDS CCA 72 bp GTAAAAAGAAAACCTCTCTCTTTGCCAATAGCACATTaGGAACAATGTGTGGCAGGCAGCGTCCCAGCATTA +
Preference number: 6 (lower is better)
Translates to: VKRKPLSLPIAH*EQCVAGSVPAL
Trigger: TAATGCTGGGACGCTGCCTGCCACACATTGTTCCCAATGTGCTATTGGCAAAGAGAGAGGTTTTCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592479.5
CDS GCA 72 bp CTCCTTTATCTGAATATAACACGTAAGGACTCCTGTTaGATAAATGGGGACTGTAGCTTTAGTGAGGACCCC +
Preference number: 6 (lower is better)
Translates to: LLYLNITRKDSC*INGDCSFSEDP
Trigger: GGGGTCCTCACTAAAGCTACAGTCCCCATTTATGCAACAGGAGTCCTTACGTGTTATATTCAGATAAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256858.10
CDS CCA 72 bp GCTTCTACTTCTTTCTCTGAAATACATTGGCCAACATaGCACCTGATGTTGTCAACTGGCCCATTTTGTTCA +
Preference number: 6 (lower is better)
Translates to: ASTSFSEIHWPT*HLMLSTGPFCS
Trigger: TGAACAAAATGGGCCAGTTGACAACATCAGGTGCCATGTTGGCCAATGTATTTCAGAGAAAGAAGTAGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS CAA 72 bp GCCAACATGGCACCTGATGTTGTCAACTGGCCCATTTaGTTCAAAAACTTGGTCTTTGTATCTTCACTCACT +
Preference number: 6 (lower is better)
Translates to: ANMAPDVVNWPI*FKNLVFVSSLT
Trigger: AGTGAGTGAAGATACAAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGACAACATCAGGTGCCATGTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS TCA 72 bp TCCACAAAAGAAGCCTTCAGGCTATCAAGAGGAGCATaGGATAATGAAAGCAGCGTCATTACATCTTCTAAG +
Preference number: 6 (lower is better)
Translates to: STKEAFRLSRGA*DNESSVITSSK
Trigger: CTTAGAAGATGTAATGACGCTGCTTTCATTATCTCATGCTCCTCTTGATAGCCTGAAGGCTTCTTTTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000588446.1
ENST00000644646.2
CDS GCA 72 bp ATGTGGTATAACAAACTCATCTCGGAACCTGGGTTCTaGGTTAGGGCCAACTCTACCAAATGTTTTTATGAT +
Preference number: 6 (lower is better)
Translates to: MWYNKLISEPGF*VRANSTKCFYD
Trigger: ATCATAAAAACATTTGGTAGAGTTGGCCCTAACGCAGAACCCAGGTTCCGAGATGAGTTTGTTATACCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587764.5
ENST00000644646.2
CDS GCA 72 bp ATTCTAAAACTGACACTCATCTCGGAACCTGGGTTCTaGGTTAGGGCCAACTCTACCAAATGTTTTTATGAT +
Preference number: 6 (lower is better)
Translates to: ILKLTLISEPGF*VRANSTKCFYD
Trigger: ATCATAAAAACATTTGGTAGAGTTGGCCCTAACGCAGAACCCAGGTTCCGAGATGAGTGTCAGTTTTAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593217.1
CDS CAA 72 bp TCAAAAACTTGGTCTTTGTATCTTCACTCACTAAGCTaGCAGCAATTGACATTGAGCCTTGAGGCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: SKTWSLYLHSLS*QQLTLSLEALG
Trigger: TCCAAGAGCCTCAAGGCTCAATGTCAATTGCTGCAAGCTTAGTGAGTGAAGATACAAAGACCAAGTTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS CAA 72 bp TTCTCTGAAATACATTGGCCAACATGGCACCTGATGTaGTCAACTGGCCCATTTTGTTCAAAAACTTGGTCT +
Preference number: 6 (lower is better)
Translates to: FSEIHWPTWHLM*STGPFCSKTWS
Trigger: AGACCAAGTTTTTGAACAAAATGGGCCAGTTGACAACATCAGGTGCCATGTTGGCCAATGTATTTCAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS CAA 90 bp CACCTGATGTTGTCAACTGGCCCATTTTGTTCAAAAACTTGGTCTTaGTATCTTCACTCACTAAGCTTGCAGCAATTGACATTGAGCCTT +
Preference number: 6 (lower is better)
Translates to: HLMLSTGPFCSKTWS*YLHSLSLQQLTLSL
Trigger: AAGGCTCAATGTCAATTGCTGCAAGCTTAGTGAGTGAAGATACAAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGACAACATCAGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS CAA 90 bp AATACATTGGCCAACATGGCACCTGATGTTGTCAACTGGCCCATTTaGTTCAAAAACTTGGTCTTTGTATCTTCACTCACTAAGCTTGCA +
Preference number: 6 (lower is better)
Translates to: NTLANMAPDVVNWPI*FKNLVFVSSLTKLA
Trigger: TGCAAGCTTAGTGAGTGAAGATACAAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGACAACATCAGGTGCCATGTTGGCCAATGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS TCA 72 bp CTTCTTTCTCTGAAATACATTGGCCAACATGGCACCTaGTGTTGTCAACTGGCCCATTTTGTTCAAAAACTT +
Preference number: 6 (lower is better)
Translates to: LLSLKYIGQHGT*CCQLAHFVQKL
Trigger: AAGTTTTTGAACAAAATGGGCCAGTTGACAACATCAGGTGCCATGTTGGCCAATGTATTTCAGAGAAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS GCA 72 bp AAATGTGGTATAACAATCATCTCGGAACCTGGGTTCTaGGTTAGGGCCAACTCTACCAAATGTTTTTATGAT +
Preference number: 6 (lower is better)
Translates to: KCGITIISEPGF*VRANSTKCFYD
Trigger: ATCATAAAAACATTTGGTAGAGTTGGCCCTAACGCAGAACCCAGGTTCCGAGATGATTGTTATACCACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587198.1
CDS CCA 72 bp AATACATTGGCCAACATGGCACCTGATGTTGTCAACTaGCCCATTTTGTTCAAAAACTTGGTCTTTGTATCT +
Preference number: 6 (lower is better)
Translates to: NTLANMAPDVVN*PILFKNLVFVS
Trigger: AGATACAAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGACAACATCAGGTGCCATGTTGGCCAATGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS CAA 90 bp TCTACTTCTTTCTCTGAAATACATTGGCCAACATGGCACCTGATGTaGTCAACTGGCCCATTTTGTTCAAAAACTTGGTCTTTGTATCTT +
Preference number: 6 (lower is better)
Translates to: STSFSEIHWPTWHLM*STGPFCSKTWSLYL
Trigger: AAGATACAAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGACAACATCAGGTGCCATGTTGGCCAATGTATTTCAGAGAAAGAAGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS TCA 72 bp CTATCTGCTGACATTCGACAAAAAGAGAGTAGTGCTTaGTGGAATGCAGGAGACAATTTCCTATTAGGTTTA +
Preference number: 6 (lower is better)
Translates to: LSADIRQKESSA*WNAGDNFLLGL
Trigger: TAAACCTAATAGGAAATTGTCTCCTGCATTCCATCAAGCACTACTCTCTTTTTGTCGAATGTCAGCAGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587725.5
ENST00000591227.1
ENST00000592479.5
ENST00000644646.2
CDS CCA 72 bp AAACAACAGTTATCAAAACAGTGTGGTAGTGGCATATaGCTAGACATACAGACCAATGGAACAGAACTGAAA +
Preference number: 6 (lower is better)
Translates to: KQQLSKQCGSGI*LDIQTNGTELK
Trigger: TTTCAGTTCTGTTCCATTGGTCTGTATGTCTAGCCATATGCCACTACCACACTGTTTTGATAACTGTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592479.5
CDS CAA 72 bp TTGTCAACTGGCCCATTTTGTTCAAAAACTTGGTCTTaGTATCTTCACTCACTAAGCTTGCAGCAATTGACA +
Preference number: 6 (lower is better)
Translates to: LSTGPFCSKTWS*YLHSLSLQQLT
Trigger: TGTCAATTGCTGCAAGCTTAGTGAGTGAAGATACAAAGACCAAGTTTTTGAACAAAATGGGCCAGTTGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000644646.2
CDS CAA 90 bp AGATGCGTAGCAATGTCCAGTCTTTTAGAATCCACAATCTGTAAGTaGTTCACCAAGGCTAACTTATGCAAATGTGGTATAACAAACTCA +
Preference number: 6 (lower is better)
Translates to: RCVAMSSLLESTICK*FTKANLCKCGITNS
Trigger: TGAGTTTGTTATACCACATTTGCATAAGTTAGCCTTGGTGAACAACTTACAGATTGTGGATTCTAAAAGACTGGACATTGCTACGCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587764.5
ENST00000644646.2
CDS TCA 72 bp AAAATCATTATAATTGAAACCAACAGAGGCATGTGTTaGCATACCTCAAACATTCTAGCAGCAGTACACCTC +
Preference number: 6 (lower is better)
Translates to: KIIIIETNRGMC*HTSNILAAVHL
Trigger: GAGGTGTACTGCTGCTAGAATGTTTGAGGTATGTCAACACATGCCTCTGTTGGTTTCAATTATAATGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587725.5
ENST00000588446.1
CDS CAA 72 bp GCAATGTCCAGTCTTTTAGAATCCACAATCTGTAAGTaGTTCACCAAGGCTAACTTATGCAAATGTGGTATA +
Preference number: 6 (lower is better)
Translates to: AMSSLLESTICK*FTKANLCKCGI
Trigger: TATACCACATTTGCATAAGTTAGCCTTGGTGAACAACTTACAGATTGTGGATTCTAAAAGACTGGACATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587198.1
ENST00000587764.5
ENST00000644646.2
CDS TCA 72 bp ATGTCAGTCCGTAAACATCTGAGACCAGGTAAAAAGTaGTTAACCATTAAATCCTCTGAAATGAAACAACAG +
Preference number: 6 (lower is better)
Translates to: MSVRKHLRPGKK*LTIKSSEMKQQ
Trigger: CTGTTGTTTCATTTCAGAGGATTTAATGGTTAATCACTTTTTACCTGGTCTCAGATGTTTACGGACTGACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256858.10
ENST00000398130.6
ENST00000587198.1
ENST00000587764.5
ENST00000644646.2
CDS CAA 72 bp CTTCTTGAAAGTCTTCTAAGCGTCCCTATAGGCAGGTaGTCCAAAATTTTTATGCTTTCAATTTGCAGTTTA +
Preference number: 6 (lower is better)
Translates to: LLESLLSVPIGR*SKIFMLSICSL
Trigger: TAAACTGCAAATTGAAAGCATAAAAATTTTGGACAACCTGCCTATAGGGACGCTTAGAAGACTTTCAAGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586920.1