Pregenerated sensors for RDH16 (Homo sapiens)
Ensembl gene IDs: ENSG00000139547Ensembl transcript IDs: ENST00000360752.4, ENST00000398138.5
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCACACCCACCCCAGTTGTTAGCCCAAGGATGGCCCTAGAGGCTTaGACCCTTGAGTGGCCACCCACGGTGACAATGCACCCAGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: LTPTPVVSPRMALEA*TLEWPPTVTMHPGA Trigger: TGCTCCTGGGTGCATTGTCACCGTGGGTGGCCACTCAAGGGTCCAAGCCTCTAGGGCCATCCTTGGGCTAACAACTGGGGTGGGTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR CCA 90 bp | CCAGTTGTTAGCCCAAGGATGGCCCTAGAGGCTTGGACCCTTGAGTaGCCACCCACGGTGACAATGCACCCAGGAGCACTATTTGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: PVVSPRMALEAWTLE*PPTVTMHPGALFGP Trigger: GGGACCAAATAGTGCTCCTGGGTGCATTGTCACCGTGGGTGGCCACTCAAGGGTCCAAGCCTCTAGGGCCATCCTTGGGCTAACAACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR TCA 90 bp | TTACTTAGGACACCACCTCCCAGCCACTGCTTCTGGGATGACTCCTaGGGCCTATGGGGCCGCATAATGGTTCCAGTCCCAACACCACGT | + |
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Preference number: 1 (lower is better) Translates to: LLRTPPPSHCFWDDS*GLWGRIMVPVPTPR Trigger: ACGTGGTGTTGGGACTGGAACCATTATGCGGCCCCATAGGCCTCAGGAGTCATCCCAGAAGCAGTGGCTGGGAGGTGGTGTCCTAAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR CCA 90 bp | CCTACCAACATCTCCAGAGAGCAGAATTATCTCCCAGGAGAATCATaGCCAGGAGGTAATGAAGGAGGTGGGATTGGTGCCCTACTGACC | + |
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Preference number: 1 (lower is better) Translates to: PTNISREQNYLPGES*PGGNEGGGIGALLT Trigger: GGTCAGTAGGGCACCAATCCCACCTCCTTCATTACCTCCTGGCCATGATTCTCCTGGGAGATAATTCTGCTCTCTGGAGATGTTGGTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR TCA 90 bp | GCACCCAGGAGCACTATTTGGTCCCTGTTTCTCAGCTGCGTAACTTaGAACTTTCCTACCAACATCTCCAGAGAGCAGAATTATCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: APRSTIWSLFLSCVT*NFPTNISREQNYLP Trigger: TGGGAGATAATTCTGCTCTCTGGAGATGTTGGTAGGAAAGTTTCAAGTTACGCAGCTGAGAAACAGGGACCAAATAGTGCTCCTGGGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR-3UTR TCA 90 bp | CACCTGCTCACACCCACCCCAGTTGTTAGCCCAAGGATGGCCCTAGAGGCTTGGGGATTGGTGCCCTACTaGCCGGACGGCTCCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: HLLTPTPVVSPRMALEAWGLVPY*PDGSLP Trigger: AGGGAGGGAGCCGTCCGGTCAGTAGGGCACCAATCC...CCAAGCCTCTAGGGCCATCCTTGGGCTAACAACTGGGGTGGGTGTGAGCAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGTCCCAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACAAGAGGCTTGGACCCTTaGGTGGCCACCCACGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: FQSQHHVYRDLQRRGALTRGLDP*VATHGD Trigger: GTCACCGTGGGTGGCCACTCAAGGGTCCAAGCCTCT...TGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTGGGACTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR-3UTR TCA 90 bp | TTATTTGTCCTCTGCACAGATCCTTACTTAGGACACCACCTCCCAGCCACTGCTAGTGGCCACCCACGGTaGCAATGCACCCAGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LFVLCTDPYLGHHLPATASGHPR*QCTQEH Trigger: GTGCTCCTGGGTGCATTGTCACCGTGGGTGGCCACT...AGCAGTGGCTGGGAGGTGGTGTCCTAAGTAAGGATCTGTGCAGAGGACAAATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR-3UTR GCA 90 bp | GTCCCTGTTTCTCAGCTGCGTAACTTGAAACTTTCCTACCAACATCTCCAGAGAAGGAGGTGGGATTGGTaGCCTACTGACCGGACGGCT | + |
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Preference number: 2 (lower is better) Translates to: VPVSQLRNLKLSYQHLQRRRWDW*PTDRTA Trigger: AGCCGTCCGGTCAGTAGGGCACCAATCCCACCTCCT...TCTCTGGAGATGTTGGTAGGAAAGTTTCAAGTTACGCAGCTGAGAAACAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR-3UTR CCA 90 bp | TGCACAGATCCTTACTTAGGACACCACCTCCCAGCCACTGCTTCTGGGATGACTCTCCCAGGAGAATCATaGCCAGGAGGTAATGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: CTDPYLGHHLPATASGMTLPGES*PGGNEG Trigger: TCCTTCATTACCTCCTGGCCATGATTCTCCTGGGAG...AGTCATCCCAGAAGCAGTGGCTGGGAGGTGGTGTCCTAAGTAAGGATCTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR CAA 90 bp | TGCACCCAGGAGCACTATTTGGTCCCTGTTTCTCAGCTGCGTAACTaGAAACTTTCCTACCAACATCTCCAGAGAGCAGAATTATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: CTQEHYLVPVSQLRN*KLSYQHLQRAELSP Trigger: GGGAGATAATTCTGCTCTCTGGAGATGTTGGTAGGAAAGTTTCAAGTTACGCAGCTGAGAAACAGGGACCAAATAGTGCTCCTGGGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR TCA 72 bp | ACACCACCTCCCAGCCACTGCTTCTGGGATGACTCCTaGGGCCTATGGGGCCGCATAATGGTTCCAGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: TPPPSHCFWDDS*GLWGRIMVPVP Trigger: TGGGACTGGAACCATTATGCGGCCCCATAGGCCTCAGGAGTCATCCCAGAAGCAGTGGCTGGGAGGTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR CCA 72 bp | ACCCCAGTTGTTAGCCCAAGGATGGCCCTAGAGGCTTaGACCCTTGAGTGGCCACCCACGGTGACAATGCAC | + |
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Preference number: 3 (lower is better) Translates to: TPVVSPRMALEA*TLEWPPTVTMH Trigger: GTGCATTGTCACCGTGGGTGGCCACTCAAGGGTCCAAGCCTCTAGGGCCATCCTTGGGCTAACAACTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR-3UTR CAA 90 bp | CATAATGGTTCCAGTCCCAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGTCACACCCACCCCAGTaGTTAGCCCAAGGATGGCCC | + |
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Preference number: 3 (lower is better) Translates to: HNGSSPNTTCTGIFRGGVSHPPQ*LAQGWP Trigger: GGGCCATCCTTGGGCTAACAACTGGGGTGGGTGTGA...CACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTGGGACTGGAACCATTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| 3UTR TCA 72 bp | AGCACTATTTGGTCCCTGTTTCTCAGCTGCGTAACTTaGAACTTTCCTACCAACATCTCCAGAGAGCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: STIWSLFLSCVT*NFPTNISREQN Trigger: ATTCTGCTCTCTGGAGATGTTGGTAGGAAAGTTTCAAGTTACGCAGCTGAGAAACAGGGACCAAATAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | GCCCTAGAGGCTTGGACCCTTGAGTGGCCACCCACGGTGACAATGCACCCAGGAAGTGGCCACCCACGGTaGCAATGCACCCAGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: ALEAWTLEWPPTVTMHPGSGHPR*QCTQEH Trigger: GTGCTCCTGGGTGCATTGTCACCGTGGGTGGCCACT...TCCTGGGTGCATTGTCACCGTGGGTGGCCACTCAAGGGTCCAAGCCTCTAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR GCA 90 bp | CCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACATCCTCCAGGCCATTTCTTCAGAGGAGGGGTaGCCTCACATCCTCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PRVQGSSEEGCPHILQAISSEEG*PHILQA Trigger: GGCCTGGAGGATGTGAGGGCACCCCTCCTCTGAAGA...AATGGCCTGGAGGATGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | TGCACAGATCCTTACTTAGGACACCACCTCCCAGCCACTGCTTCTGGGATGACTGGATTGGTGCCCTACTaGCCGGACGGCTCCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: CTDPYLGHHLPATASGMTGLVPY*PDGSLP Trigger: AGGGAGGGAGCCGTCCGGTCAGTAGGGCACCAATCC...AGTCATCCCAGAAGCAGTGGCTGGGAGGTGGTGTCCTAAGTAAGGATCTGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | CAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACATCCTCCAGGCGAAGTCCTGCTTGGTaGGCAACTCATTGGGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: QHHVYRDLQRRGALTSSRRSPAW*ATHWEP Trigger: CGGCTCCCAATGAGTTGCTCACCAAGCAGGACTTCG...CCTGGAGGATGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR GCA 90 bp | TGGGATTGGTGCCCTACTGACCGGACGGCTCCCTCCCTCCACTTTATATCTCTCAGGAGGTGGGATTGGTaGCCTACTGACCGGACGGCT | + |
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Preference number: 4 (lower is better) Translates to: WDWCPTDRTAPSLHFISLRRWDW*PTDRTA Trigger: AGCCGTCCGGTCAGTAGGGCACCAATCCCACCTCCT...GAGAGATATAAAGTGGAGGGAGGGAGCCGTCCGGTCAGTAGGGCACCAATCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CCA 90 bp | CCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACATCCTCCAGGCCATTGGCCTCCTTGACCTCTaGACTGGACCGGTCCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: PRVQGSSEEGCPHILQAIGLLDL*TGPVPN Trigger: ATTTGGGACCGGTCCAGTCCAGAGGTCAAGGAGGCC...AATGGCCTGGAGGATGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CCA 90 bp | CCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACATCCTCCAGGCCATTAGCTTCATAGAGCCTTaGCCGGGCTTGGAGAGACCC | + |
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Preference number: 4 (lower is better) Translates to: PRVQGSSEEGCPHILQAISFIEP*PGLERP Trigger: GGGTCTCTCCAAGCCCGGCCAAGGCTCTATGAAGCT...AATGGCCTGGAGGATGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CCA 90 bp | TGGGATTGGTGCCCTACTGACCGGACGGCTCCCTCCCTCCACTTTATATCTCTCATGGCCCTAGAGGCTTaGACCCTTGAGTGGCCACCC | + |
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Preference number: 4 (lower is better) Translates to: WDWCPTDRTAPSLHFISLMALEA*TLEWPP Trigger: GGGTGGCCACTCAAGGGTCCAAGCCTCTAGGGCCAT...GAGAGATATAAAGTGGAGGGAGGGAGCCGTCCGGTCAGTAGGGCACCAATCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CCA 90 bp | CAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACATCCTCCAGGCAGGAGGTAATGGCATaGGCTGAGGCTCCTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: QHHVYRDLQRRGALTSSRQEVMA*AEAPST Trigger: GGTGGAAGGAGCCTCAGCCCATGCCATTACCTCCTG...CCTGGAGGATGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CCA 90 bp | CAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACATCCTCCAGGACTCATTGGGAGCCGTaGGCAAGGAGATGCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: QHHVYRDLQRRGALTSSRTHWEP*ARRCQH Trigger: ATGCTGGCATCTCCTTGCCCACGGCTCCCAATGAGT...CCTGGAGGATGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | ACCCACGGTGACAATGCACCCAGGAGCACTATTTGGTCCCTGTTTCTCAGCTGCGCCTCCACCAAAAAGTaGCACCCGGCCCATGACACT | + |
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Preference number: 4 (lower is better) Translates to: THGDNAPRSTIWSLFLSCASTKK*HPAHDT Trigger: AGTGTCATGGGCCGGGTGTCACTTTTTGGTGGAGGC...GCAGCTGAGAAACAGGGACCAAATAGTGCTCCTGGGTGCATTGTCACCGTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR GCA 90 bp | GCCCTAGAGGCTTGGACCCTTGAGTGGCCACCCACGGTGACAATGCACCCAGGAATGGTCACGAAGTCCTaGTTGGTGAGCAACTCATTG | + |
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Preference number: 4 (lower is better) Translates to: ALEAWTLEWPPTVTMHPGMVTKS*LVSNSL Trigger: CAATGAGTTGCTCACCAAGCAGGACTTCGTGACCAT...TCCTGGGTGCATTGTCACCGTGGGTGGCCACTCAAGGGTCCAAGCCTCTAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CCA 90 bp | CCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACATCCTCCAGGCCATTAGCCTTGGCCGGGCTTaGAGAGACCCAGTACATAAT | + |
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Preference number: 4 (lower is better) Translates to: PRVQGSSEEGCPHILQAISLGRA*RDPVHN Trigger: ATTATGTACTGGGTCTCTCCAAGCCCGGCCAAGGCT...AATGGCCTGGAGGATGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | GCCCTAGAGGCTTGGACCCTTGAGTGGCCACCCACGGTGACAATGCACCCAGGATGGTCACAGCAGTCTTaGAATAGCCAGGTTCAATCA | + |
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Preference number: 4 (lower is better) Translates to: ALEAWTLEWPPTVTMHPGWSQQS*NSQVQS Trigger: TGATTGAACCTGGCTATTTCAAGACTGCTGTGACCA...TCCTGGGTGCATTGTCACCGTGGGTGGCCACTCAAGGGTCCAAGCCTCTAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | CATAATGGTTCCAGTCCCAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGTTCTGGGATGACTCCTaGGGCCTATGGGGCCGCATA | + |
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Preference number: 4 (lower is better) Translates to: HNGSSPNTTCTGIFRGGVFWDDS*GLWGRI Trigger: TATGCGGCCCCATAGGCCTCAGGAGTCATCCCAGAA...CACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTGGGACTGGAACCATTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR GCA 90 bp | TGGGATTGGTGCCCTACTGACCGGACGGCTCCCTCCCTCCACTTTATATCTCTCTCAGCGCATGCTCCATaGAGTTGGTCACCAACGACA | + |
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Preference number: 4 (lower is better) Translates to: WDWCPTDRTAPSLHFISLSAHAP*SWSPTT Trigger: TGTCGTTGGTGACCAACTGCATGGAGCATGCGCTGA...GAGAGATATAAAGTGGAGGGAGGGAGCCGTCCGGTCAGTAGGGCACCAATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | TCCACTTTATATCTCTCCCAAGGATACACCACCCCTCATAGCACACCCCAAATCGGTAATGGCATGGGCTaGGGCTCCTTCCACCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: STLYLSQGYTTPHSTPQIGNGMG*GSFHLL Trigger: GAGCAGGTGGAAGGAGCCTCAGCCCATGCCATTACC...GATTTGGGGTGTGCTATGAGGGGTGGTGTATCCTTGGGAGAGATATAAAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | AACTTTCCTACCAACATCTCCAGAGAGCAGAATTATCTCCCAGGAGAATCATGGCGCCATAGGCCTCCTTaGCCTCTGGACTGGACCGGT | + |
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Preference number: 4 (lower is better) Translates to: NFPTNISREQNYLPGESWRHRPP*PLDWTG Trigger: ACCGGTCCAGTCCAGAGGTCAAGGAGGCCTATGGCG...CCATGATTCTCCTGGGAGATAATTCTGCTCTCTGGAGATGTTGGTAGGAAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | AACTTTCCTACCAACATCTCCAGAGAGCAGAATTATCTCCCAGGAGAATCATGGAGAGGCTTGGACCCTTaGGTGGCCACCCACGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: NFPTNISREQNYLPGESWRGLDP*VATHGD Trigger: GTCACCGTGGGTGGCCACTCAAGGGTCCAAGCCTCT...CCATGATTCTCCTGGGAGATAATTCTGCTCTCTGGAGATGTTGGTAGGAAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | TACCAACATCTCCAGAGAGCAGAATTATCTCCCAGGAGAATCATGGCCAGGAGGAGGAGAGTTCCCTCCTaGGGGAGTCAGAGAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: YQHLQRAELSPRRIMARRRRVPS*GSQRRL Trigger: AAGCCTTCTCTGACTCCCTCAGGAGGGAACTCTCCT...CCTCCTGGCCATGATTCTCCTGGGAGATAATTCTGCTCTCTGGAGATGTTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR GCA 90 bp | CCAACATCTCCAGAGAGCAGAATTATCTCCCAGGAGAATCATGGCCAGGAGGTACAGGCAATCAGCGCATaGTCCATGCAGTTGGTCACC | + |
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Preference number: 4 (lower is better) Translates to: PTSPESRIISQENHGQEVQAISA*SMQLVT Trigger: GGTGACCAACTGCATGGAGCATGCGCTGATTGCCTG...TACCTCCTGGCCATGATTCTCCTGGGAGATAATTCTGCTCTCTGGAGATGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR GCA 90 bp | TTATTTGTCCTCTGCACAGATCCTTACTTAGGACACCACCTCCCAGCCACTGCTCCGTGGGCAAGGAGATaGCAGCATTATTCACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LFVLCTDPYLGHHLPATAPWARR*QHYSPG Trigger: GCCTGGTGAATAATGCTGGCATCTCCTTGCCCACGG...AGCAGTGGCTGGGAGGTGGTGTCCTAAGTAAGGATCTGTGCAGAGGACAAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CCA 90 bp | CATAATGGTTCCAGTCCCAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGCTCCCAGGAGAATCATaGCCAGGAGGTAATGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: HNGSSPNTTCTGIFRGGVLPGES*PGGNEG Trigger: TCCTTCATTACCTCCTGGCCATGATTCTCCTGGGAG...CACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTGGGACTGGAACCATTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CCA 90 bp | GTTTCTCAGCTGCGTAACTTGAAACTTTCCTACCAACATCTCCAGAGAGCAGAAGCTTGGACCCTTGAGTaGCCACCCACGGTGACAATG | + |
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Preference number: 4 (lower is better) Translates to: VSQLRNLKLSYQHLQRAEAWTLE*PPTVTM Trigger: CATTGTCACCGTGGGTGGCCACTCAAGGGTCCAAGC...TTCTGCTCTCTGGAGATGTTGGTAGGAAAGTTTCAAGTTACGCAGCTGAGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CCA 90 bp | TTATTTGTCCTCTGCACAGATCCTTACTTAGGACACCACCTCCCAGCCACTGCTTGGGAGGGTGTAGACTaGCCCAGAATTAACACACAG | + |
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Preference number: 4 (lower is better) Translates to: LFVLCTDPYLGHHLPATAWEGVD*PRINTQ Trigger: CTGTGTGTTAATTCTGGGCCAGTCTACACCCTCCCA...AGCAGTGGCTGGGAGGTGGTGTCCTAAGTAAGGATCTGTGCAGAGGACAAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR GCA 90 bp | ACTGGCCCAGAATTAACACACAGCCTGATAAGGAAGCAGGAGGTAATGGCATGGTCCTGTGTGCACTTCTaGTCCATTTGTTCAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: TGPELTHSLIRKQEVMAWSCVHF*SICSAD Trigger: ATCAGCTGAACAAATGGAGCAGAAGTGCACACAGGA...CCATGCCATTACCTCCTGCTTCCTTATCAGGCTGTGTGTTAATTCTGGGCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CCA 90 bp | GTCCCTGTTTCTCAGCTGCGTAACTTGAAACTTTCCTACCAACATCTCCAGAGAAGTTCACGTCCAGTATaGTCACGAAGTCCTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VPVSQLRNLKLSYQHLQRSSRPV*SRSPAW Trigger: CCAAGCAGGACTTCGTGACCATACTGGACGTGAACT...TCTCTGGAGATGTTGGTAGGAAAGTTTCAAGTTACGCAGCTGAGAAACAGGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | CCAACATCTCCAGAGAGCAGAATTATCTCCCAGGAGAATCATGGCCAGGAGGTACTCCATTTGTTCAGCTaGTTTCTTATAGTCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: PTSPESRIISQENHGQEVLHLFS*FLIVCN Trigger: GTTGCAGACTATAAGAAATCAGCTGAACAAATGGAG...TACCTCCTGGCCATGATTCTCCTGGGAGATAATTCTGCTCTCTGGAGATGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR GCA 90 bp | GTCCCTGTTTCTCAGCTGCGTAACTTGAAACTTTCCTACCAACATCTCCAGAGAACGACAGATCCTGTGTaGACTTCTGCTCCATTTGTT | + |
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Preference number: 4 (lower is better) Translates to: VPVSQLRNLKLSYQHLQRTTDPV*TSAPFV Trigger: AACAAATGGAGCAGAAGTGCACACAGGATCTGTCGT...TCTCTGGAGATGTTGGTAGGAAAGTTTCAAGTTACGCAGCTGAGAAACAGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR TCA 90 bp | GTTTCTCAGCTGCGTAACTTGAAACTTTCCTACCAACATCTCCAGAGAGCAGAACTCAGCTGCGTAACTTaGAACTTTCCTACCAACATC | + |
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Preference number: 4 (lower is better) Translates to: VSQLRNLKLSYQHLQRAELSCVT*NFPTNI Trigger: GATGTTGGTAGGAAAGTTTCAAGTTACGCAGCTGAG...TTCTGCTCTCTGGAGATGTTGGTAGGAAAGTTTCAAGTTACGCAGCTGAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS-3UTR CAA 90 bp | CCAGTTGTTAGCCCAAGGATGGCCCTAGAGGCTTGGACCCTTGAGTGGCCACCCTCACACCCACCCCAGTaGTTAGCCCAAGGATGGCCC | + |
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Preference number: 5 (lower is better) Translates to: PVVSPRMALEAWTLEWPPSHPPQ*LAQGWP Trigger: GGGCCATCCTTGGGCTAACAACTGGGGTGGGTGTGA...GGGTGGCCACTCAAGGGTCCAAGCCTCTAGGGCCATCCTTGGGCTAACAACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS TCA 90 bp | GGCAGCAGCCTGGCAGGAGGAGGGTTGCTCACCATTGCTGAGGCTTaGGTAGGAAAGCAAAGCAGCTGGGCAGCTCAAACTGGGCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: GSSLAGGGLLTIAEA*VGKQSSWAAQTGRS Trigger: GCTTCGCCCAGTTTGAGCTGCCCAGCTGCTTTGCTTTCCTACTCAAGCCTCAGCAATGGTGAGCAACCCTCCTCCTGCCAGGCTGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 90 bp | GCTGAGGTACCTGGTTCATCTCACTGGGACTGGTTGGACAGTGCGTaGAGCCCACAGAGGGTGAGCCGAAGCAAGGCAGGGCATTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AEVPGSSHWDWLDSA*SPQRVSRSKAGHCL Trigger: AAGGCAATGCCCTGCCTTGCTTCGGCTCACCCTCTGTGGGCTGCACGCACTGTCCAACCAGTCCCAGTGAGATGAACCAGGTACCTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS-3UTR CAA 90 bp | TTCCAGTCCCAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACAATGACACTGGAGACGTaGACCACACGGCCCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQSQHHVYRDLQRRGALTMTLET*TTRPLA Trigger: GGCCAGGGGCCGTGTGGTCAACGTCTCCAGTGTCAT...TGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTGGGACTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS TCA 90 bp | CCTGCAAGGCAGCAGCCTGGCAGGAGGAGGGTTGCTCACCATTGCTaGGGCTTGAGTAGGAAAGCAAAGCAGCTGGGCAGCTCAAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: PARQQPGRRRVAHHC*GLSRKAKQLGSSNW Trigger: CCAGTTTGAGCTGCCCAGCTGCTTTGCTTTCCTACTCAAGCCTCAGCAATGGTGAGCAACCCTCCTCCTGCCAGGCTGCTGCCTTGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS-3UTR CAA 90 bp | TTCCAGTCCCAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACAAGGCCCCAGAGTCCTTaGTCTCTCACGCACTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQSQHHVYRDLQRRGALTRPQSP*SLTHSF Trigger: GAAGGAGTGCGTGAGAGACAAAGGACTCTGGGGCCT...TGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTGGGACTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS CCA 90 bp | TGCTGTTCTGCAGCCTCTGCTGGTGATACCCAGGCAAACAGGGACTaGAGTGGACCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CCSAASAGDTQANRD*SGPPANSNRPAAEE Trigger: TTCCTCAGCTGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGTCCCTGTTTGCCTGGGTATCACCAGCAGAGGCTGCAGAACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CCA 90 bp | TGGGTGATTTCTGCATTTCCAGCTGAGGTACCTGGTTCATCTCACTaGGACTGGTTGGACAGTGCGTGCAGCCCACAGAGGGTGAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: WVISAFPAEVPGSSH*DWLDSACSPQRVSR Trigger: TCGGCTCACCCTCTGTGGGCTGCACGCACTGTCCAACCAGTCCCAGTGAGATGAACCAGGTACCTCAGCTGGAAATGCAGAAATCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS-3UTR CAA 90 bp | CAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGCCCTCACATCCTCCAGGACCCAGGAGCACTATTaGGTCCCTGTTTCTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QHHVYRDLQRRGALTSSRTQEHY*VPVSQL Trigger: CAGCTGAGAAACAGGGACCAAATAGTGCTCCTGGGT...CCTGGAGGATGTGAGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS CCA 90 bp | ATTTCTGCATTTCCAGCTGAGGTACCTGGTTCATCTCACTGGGACTaGTTGGACAGTGCGTGCAGCCCACAGAGGGTGAGCCGAAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ISAFPAEVPGSSHWD*LDSACSPQRVSRSK Trigger: CTTGCTTCGGCTCACCCTCTGTGGGCTGCACGCACTGTCCAACCAGTCCCAGTGAGATGAACCAGGTACCTCAGCTGGAAATGCAGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS TCA 90 bp | CCCCCAACAAGTTCACGTCCAGTATGGTCACGAAGTCCTGCTTGGTaGGCAACTCATTGGGAGCCGTGGGCAAGGAGATGCCAGCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: PPTSSRPVWSRSPAW*ATHWEPWARRCQHY Trigger: ATAATGCTGGCATCTCCTTGCCCACGGCTCCCAATGAGTTGCTCACCAAGCAGGACTTCGTGACCATACTGGACGTGAACTTGTTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS GCA 90 bp | GCAGCTCAAACTGGGCGAAGCCCACTGCAGCAAGGCAAGGCTTTCTaGCTCTATAGACTCCACCTCTGGGAGCAGTGCATAACTGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: AAQTGRSPLQQGKAF*LYRLHLWEQCITEQ Trigger: TTGTTCAGTTATGCACTGCTCCCAGAGGTGGAGTCTATAGAGGCAGAAAGCCTTGCCTTGCTGCAGTGGGCTTCGCCCAGTTTGAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 90 bp | TCAATCACCCCCAACAAGTTCACGTCCAGTATGGTCACGAAGTCCTaGTTGGTGAGCAACTCATTGGGAGCCGTGGGCAAGGAGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SITPNKFTSSMVTKS*LVSNSLGAVGKEMP Trigger: TGGCATCTCCTTGCCCACGGCTCCCAATGAGTTGCTCACCAAGCAGGACTTCGTGACCATACTGGACGTGAACTTGTTGGGGGTGATTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS TCA 90 bp | CAGCTCCGGTCTGCAGCTCCCAGTGTGACTGATGCAGAAAATGGGTaGTTTCTGCATTTCCAGCTGAGGTACCTGGTTCATCTCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLRSAAPSVTDAENG*FLHFQLRYLVHLTG Trigger: CCCAGTGAGATGAACCAGGTACCTCAGCTGGAAATGCAGAAATCACCCATTTTCTGCATCAGTCACACTGGGAGCTGCAGACCGGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS TCA 90 bp | GATGGGCAAATAGGAACAGCTCCGGTCTGCAGCTCCCAGTGTGACTaGTGCAGAAAATGGGTGATTTCTGCATTTCCAGCTGAGGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: DGQIGTAPVCSSQCD*CRKWVISAFPAEVP Trigger: AGGTACCTCAGCTGGAAATGCAGAAATCACCCATTTTCTGCATCAGTCACACTGGGAGCTGCAGACCGGAGCTGTTCCTATTTGCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS TCA 90 bp | ATATTTGCTGTTCTGCAATATTTGCTGTTCTGCAGCCTCTGCTGGTaGTACCCAGGCAAACAGGGACTGGAGTGGACCTCCAGCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IFAVLQYLLFCSLCW*YPGKQGLEWTSSKL Trigger: GAGTTTGCTGGAGGTCCACTCCAGTCCCTGTTTGCCTGGGTATCACCAGCAGAGGCTGCAGAACAGCAAATATTGCAGAACAGCAAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS-3UTR CAA 90 bp | TCCACTTTATATCTCTCCCAAGGATACACCACCCCTCATAGCACACCCCAAATCGTCACGAAGTCCTGCTaGGTGAGCAACTCATTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: STLYLSQGYTTPHSTPQIVTKSC*VSNSLG Trigger: TCCCAATGAGTTGCTCACCAAGCAGGACTTCGTGAC...GATTTGGGGTGTGCTATGAGGGGTGGTGTATCCTTGGGAGAGATATAAAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS TCA 90 bp | CTGATTTCTTATAGTCTGCAACAAACTTCTCGCCATAGGCCTCCTTaGCCTCTGGACTGGACCGGTCCCAAATCTCCAGGAAGCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LISYSLQQTSRHRPP*PLDWTGPKSPGSSL Trigger: TAAAGAGCTTCCTGGAGATTTGGGACCGGTCCAGTCCAGAGGTCAAGGAGGCCTATGGCGAGAAGTTTGTTGCAGACTATAAGAAATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360752.4 ENST00000398138.5 |
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| CDS GCA 90 bp | CAAGGCAAGGCTTTCTGCCTCTATAGACTCCACCTCTGGGAGCAGTaGATAACTGAACAAAAGGCAGCAGAAACCTCTGCAGACTTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QGKAFCLYRLHLWEQ*ITEQKAAETSADLN Trigger: GTTTAAGTCTGCAGAGGTTTCTGCTGCCTTTTGTTCAGTTATGCACTGCTCCCAGAGGTGGAGTCTATAGAGGCAGAAAGCCTTGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS-3UTR CAA 90 bp | CATAATGGTTCCAGTCCCAACACCACGTGTACAGGGATCTTCAGAGGAGGGGTGTCTCAGCTGCGTAACTaGAAACTTTCCTACCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: HNGSSPNTTCTGIFRGGVSQLRN*KLSYQH Trigger: ATGTTGGTAGGAAAGTTTCAAGTTACGCAGCTGAGA...CACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTGGGACTGGAACCATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS GCA 90 bp | GACGAAGTTTCCAGAGGAAGGATCAGGCAACAATATTTGCTGTTCTaGAATATTTGCTGTTCTGCAGCCTCTGCTGGTGATACCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DEVSRGRIRQQYLLF*NICCSAASAGDTQA Trigger: TGCCTGGGTATCACCAGCAGAGGCTGCAGAACAGCAAATATTGCAGAACAGCAAATATTGTTGCCTGATCCTTCCTCTGGAAACTTCGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 90 bp | CCCTCTGGGACGAAGTTTCCAGAGGAAGGATCAGGCAACAATATTTaGTGTTCTGCAATATTTGCTGTTCTGCAGCCTCTGCTGGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: PSGTKFPEEGSGNNI*CSAIFAVLQPLLVI Trigger: TATCACCAGCAGAGGCTGCAGAACAGCAAATATTGCAGAACAGCAAATATTGTTGCCTGATCCTTCCTCTGGAAACTTCGTCCCAGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 72 bp | CCTGGTTCATCTCACTGGGACTGGTTGGACAGTGCGTaGAGCCCACAGAGGGTGAGCCGAAGCAAGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSSHWDWLDSA*SPQRVSRSKAG Trigger: CCCTGCCTTGCTTCGGCTCACCCTCTGTGGGCTGCACGCACTGTCCAACCAGTCCCAGTGAGATGAACCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 72 bp | GGTACCTGGTTCATCTCACTGGGACTGGTTGGACAGTaGGTGCAGCCCACAGAGGGTGAGCCGAAGCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTWFISLGLVGQ*VQPTEGEPKQG Trigger: GCCTTGCTTCGGCTCACCCTCTGTGGGCTGCACGCACTGTCCAACCAGTCCCAGTGAGATGAACCAGGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CAA 72 bp | CCAGCTGAGGTACCTGGTTCATCTCACTGGGACTGGTaGGACAGTGCGTGCAGCCCACAGAGGGTGAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: PAEVPGSSHWDW*DSACSPQRVSR Trigger: TCGGCTCACCCTCTGTGGGCTGCACGCACTGTCCAACCAGTCCCAGTGAGATGAACCAGGTACCTCAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS TCA 72 bp | CAGCAGCCTGGCAGGAGGAGGGTTGCTCACCATTGCTaGGGCTTGAGTAGGAAAGCAAAGCAGCTGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QQPGRRRVAHHC*GLSRKAKQLGS Trigger: GCTGCCCAGCTGCTTTGCTTTCCTACTCAAGCCTCAGCAATGGTGAGCAACCCTCCTCCTGCCAGGCTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CAA 90 bp | CAGTGCGTGCAGCCCACAGAGGGTGAGCCGAAGCAAGGCAGGGCATaGCCTTACCCAGGAAGTGTAAGAGGTCAGGGGATTTCCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QCVQPTEGEPKQGRA*PYPGSVRGQGISLS Trigger: GGAAAGGGAAATCCCCTGACCTCTTACACTTCCTGGGTAAGGCAATGCCCTGCCTTGCTTCGGCTCACCCTCTGTGGGCTGCACGCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CAA 90 bp | TCTGCATTTCCAGCTGAGGTACCTGGTTCATCTCACTGGGACTGGTaGGACAGTGCGTGCAGCCCACAGAGGGTGAGCCGAAGCAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SAFPAEVPGSSHWDW*DSACSPQRVSRSKA Trigger: TGCCTTGCTTCGGCTCACCCTCTGTGGGCTGCACGCACTGTCCAACCAGTCCCAGTGAGATGAACCAGGTACCTCAGCTGGAAATGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CCA 72 bp | GCAGCCTCTGCTGGTGATACCCAGGCAAACAGGGACTaGAGTGGACCTCCAGCAAACTCCAACAGACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AASAGDTQANRD*SGPPANSNRPA Trigger: TGCAGGTCTGTTGGAGTTTGCTGGAGGTCCACTCCAGTCCCTGTTTGCCTGGGTATCACCAGCAGAGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CCA 72 bp | TTTCCAGCTGAGGTACCTGGTTCATCTCACTGGGACTaGTTGGACAGTGCGTGCAGCCCACAGAGGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPAEVPGSSHWD*LDSACSPQRVS Trigger: GCTCACCCTCTGTGGGCTGCACGCACTGTCCAACCAGTCCCAGTGAGATGAACCAGGTACCTCAGCTGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CAA 72 bp | CAGCCCACAGAGGGTGAGCCGAAGCAAGGCAGGGCATaGCCTTACCCAGGAAGTGTAAGAGGTCAGGGGATT | + |
|
Preference number: 6 (lower is better) Translates to: QPTEGEPKQGRA*PYPGSVRGQGI Trigger: AATCCCCTGACCTCTTACACTTCCTGGGTAAGGCAATGCCCTGCCTTGCTTCGGCTCACCCTCTGTGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS TCA 72 bp | TCCCACAGAGCTTTGCTCACTGCTAGTGCAGTAGTCTaGGATCAACCTGCAAGGCAGCAGCCTGGCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHRALLTASAVV*DQPARQQPGRR Trigger: CCTCCTGCCAGGCTGCTGCCTTGCAGGTTGATCTCAGACTACTGCACTAGCAGTGAGCAAAGCTCTGTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 72 bp | AAAGCAGCTGGGCAGCTCAAACTGGGCGAAGCCCACTaGAGCAAGGCAAGGCTTTCTGCCTCTATAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: KAAGQLKLGEAH*SKARLSASIDS Trigger: GGAGTCTATAGAGGCAGAAAGCCTTGCCTTGCTGCAGTGGGCTTCGCCCAGTTTGAGCTGCCCAGCTGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CCA 72 bp | TGCAGTAGTCTGAGATCAACCTGCAAGGCAGCAGCCTaGCAGGAGGAGGGTTGCTCACCATTGCTGAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CSSLRSTCKAAA*QEEGCSPLLRL Trigger: AAGCCTCAGCAATGGTGAGCAACCCTCCTCCTGCCAGGCTGCTGCCTTGCAGGTTGATCTCAGACTACTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CCA 72 bp | TCTGCATTTCCAGCTGAGGTACCTGGTTCATCTCACTaGGACTGGTTGGACAGTGCGTGCAGCCCACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAFPAEVPGSSH*DWLDSACSPQR Trigger: CCTCTGTGGGCTGCACGCACTGTCCAACCAGTCCCAGTGAGATGAACCAGGTACCTCAGCTGGAAATGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CAA 90 bp | ATCACCCCCAACAAGTTCACGTCCAGTATGGTCACGAAGTCCTGCTaGGTGAGCAACTCATTGGGAGCCGTGGGCAAGGAGATGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ITPNKFTSSMVTKSC*VSNSLGAVGKEMPA Trigger: TGCTGGCATCTCCTTGCCCACGGCTCCCAATGAGTTGCTCACCAAGCAGGACTTCGTGACCATACTGGACGTGAACTTGTTGGGGGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS TCA 72 bp | AGTTCACGTCCAGTATGGTCACGAAGTCCTGCTTGGTaGGCAACTCATTGGGAGCCGTGGGCAAGGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRPVWSRSPAW*ATHWEPWARRC Trigger: GCATCTCCTTGCCCACGGCTCCCAATGAGTTGCTCACCAAGCAGGACTTCGTGACCATACTGGACGTGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS GCA 72 bp | CCCAACAAGTTCACGTCCAGTATGGTCACGAAGTCCTaGTTGGTGAGCAACTCATTGGGAGCCGTGGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PNKFTSSMVTKS*LVSNSLGAVGK Trigger: CTTGCCCACGGCTCCCAATGAGTTGCTCACCAAGCAGGACTTCGTGACCATACTGGACGTGAACTTGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS TCA 72 bp | GTTCTGCAATATTTGCTGTTCTGCAGCCTCTGCTGGTaGTACCCAGGCAAACAGGGACTGGAGTGGACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLQYLLFCSLCW*YPGKQGLEWTS Trigger: GGAGGTCCACTCCAGTCCCTGTTTGCCTGGGTATCACCAGCAGAGGCTGCAGAACAGCAAATATTGCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CAA 72 bp | AACAAGTTCACGTCCAGTATGGTCACGAAGTCCTGCTaGGTGAGCAACTCATTGGGAGCCGTGGGCAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: NKFTSSMVTKSC*VSNSLGAVGKE Trigger: CTCCTTGCCCACGGCTCCCAATGAGTTGCTCACCAAGCAGGACTTCGTGACCATACTGGACGTGAACTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398138.5 |
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| CDS TCA 72 bp | TATAGTCTGCAACAAACTTCTCGCCATAGGCCTCCTTaGCCTCTGGACTGGACCGGTCCCAAATCTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YSLQQTSRHRPP*PLDWTGPKSPG Trigger: TCCTGGAGATTTGGGACCGGTCCAGTCCAGAGGTCAAGGAGGCCTATGGCGAGAAGTTTGTTGCAGACTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000360752.4 ENST00000398138.5 |
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| CDS GCA 72 bp | ACTGGGCAATGTGCCCCTAGTCTCCTGATTTCTCTCTaGCTTGCTATGCCCACTACATGCATGCTGTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TGQCAPSLLISL*LAMPTTCMLCP Trigger: TGGACACAGCATGCATGTAGTGGGCATAGCAAGGCAGAGAGAAATCAGGAGACTAGGGGCACATTGCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CCA 72 bp | AATGGCACACCAGGAGATTATATCCTGTGCCTGGTTTaGTGGGTCCCATTCCCACAGAGCTTTGCTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: NGTPGDYILCLV*WVPFPQSFAHC Trigger: GCAGTGAGCAAAGCTCTGTGGGAATGGGACCCACCAAACCAGGCACAGGATATAATCTCCTGGTGTGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS TCA 72 bp | CTTAGAACAGACAGACTGCCTTCTCAAATGGGTCCCTaGACCCTGTGTAGACTAACTGGGAGACACCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRTDRLPSQMGP*TLCRLTGRHLP Trigger: TGGGAGGTGTCTCCCAGTTAGTCTACACAGGGTTCAGGGACCCATTTGAGAAGGCAGTCTGTCTGTTCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS TCA 72 bp | GTCAGGGGATTTCCCTTTCCTAGACAAGGGAAGCCGTaGCAGACTGTACCTGGAAAAACAAGACACTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VRGFPFPRQGKP*QTVPGKTRHSC Trigger: GCAGGAGTGTCTTGTTTTTCCAGGTACAGTCTGTCACGGCTTCCCTTGTCTAGGAAAGGGAAATCCCCTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 72 bp | CCCAGCATGGTGTTTGAGCTCTTAGAACAGACAGACTaGCTTCTCAAATGGGTCCCTGAACCCTGTGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: PSMVFELLEQTD*LLKWVPEPCVD Trigger: GTCTACACAGGGTTCAGGGACCCATTTGAGAAGGCAGTCTGTCTGTTCTAAGAGCTCAAACACCATGCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
||
| CDS CAA 72 bp | AAATGGCACACCAGGAGATTATATCCTGTGCCTGGTTaGGTGGGTCCCATTCCCACAGAGCTTTGCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: KWHTRRLYPVPG*VGPIPTELCSL Trigger: CAGTGAGCAAAGCTCTGTGGGAATGGGACCCACCAAACCAGGCACAGGATATAATCTCCTGGTGTGCCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
||
| CDS TCA 72 bp | ATAGGAACAGCTCCGGTCTGCAGCTCCCAGTGTGACTaGTGCAGAAAATGGGTGATTTCTGCATTTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: IGTAPVCSSQCD*CRKWVISAFPA Trigger: AGCTGGAAATGCAGAAATCACCCATTTTCTGCATCAGTCACACTGGGAGCTGCAGACCGGAGCTGTTCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 72 bp | GCTTTCTGCCTCTATAGACTCCACCTCTGGGAGCAGTaGATAACTGAACAAAAGGCAGCAGAAACCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AFCLYRLHLWEQ*ITEQKAAETSA Trigger: TGCAGAGGTTTCTGCTGCCTTTTGTTCAGTTATGCACTGCTCCCAGAGGTGGAGTCTATAGAGGCAGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CAA 90 bp | CCCCTCTGGGACGAAGTTTCCAGAGGAAGGATCAGGCAACAATATTaGCTGTTCTGCAATATTTGCTGTTCTGCAGCCTCTGCTGGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PLWDEVSRGRIRQQY*LFCNICCSAASAGD Trigger: ATCACCAGCAGAGGCTGCAGAACAGCAAATATTGCAGAACAGCAAATATTGTTGCCTGATCCTTCCTCTGGAAACTTCGTCCCAGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS TCA 72 bp | CTGATGCAGAAAATGGGTGATTTCTGCATTTCCAGCTaGGGTACCTGGTTCATCTCACTGGGACTGGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LMQKMGDFCISS*GTWFISLGLVG Trigger: TCCAACCAGTCCCAGTGAGATGAACCAGGTACCTCAGCTGGAAATGCAGAAATCACCCATTTTCTGCATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS TCA 72 bp | TCTGCAGCTCCCAGTGTGACTGATGCAGAAAATGGGTaGTTTCTGCATTTCCAGCTGAGGTACCTGGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SAAPSVTDAENG*FLHFQLRYLVH Trigger: ATGAACCAGGTACCTCAGCTGGAAATGCAGAAATCACCCATTTTCTGCATCAGTCACACTGGGAGCTGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 72 bp | TCCAGAGGAAGGATCAGGCAACAATATTTGCTGTTCTaGAATATTTGCTGTTCTGCAGCCTCTGCTGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: SRGRIRQQYLLF*NICCSAASAGD Trigger: ATCACCAGCAGAGGCTGCAGAACAGCAAATATTGCAGAACAGCAAATATTGTTGCCTGATCCTTCCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 72 bp | ACGAAGTTTCCAGAGGAAGGATCAGGCAACAATATTTaGTGTTCTGCAATATTTGCTGTTCTGCAGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: TKFPEEGSGNNI*CSAIFAVLQPL Trigger: CAGAGGCTGCAGAACAGCAAATATTGCAGAACAGCAAATATTGTTGCCTGATCCTTCCTCTGGAAACTTCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS CCA 72 bp | GCTCAAATACTGCACTTTTCCAATGGTCTTAGCAAATaGCACACCAGGAGATTATATCCTGTGCCTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: AQILHFSNGLSK*HTRRLYPVPGL Trigger: CAAACCAGGCACAGGATATAATCTCCTGGTGTGCCATTTGCTAAGACCATTGGAAAAGTGCAGTATTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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| CDS GCA 72 bp | TGTACCTGGAAAAACAAGACACTCCTGCTCAAATACTaGACTTTTCCAATGGTCTTAGCAAATGGCACACCA | + |
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Preference number: 6 (lower is better) Translates to: CTWKNKTLLLKY*TFPMVLANGTP Trigger: TGGTGTGCCATTTGCTAAGACCATTGGAAAAGTGCAGTATTTGAGCAGGAGTGTCTTGTTTTTCCAGGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000360752.4 |
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