Pregenerated sensors for RCBTB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000136161Ensembl transcript IDs: ENST00000344532.8, ENST00000430805.6, ENST00000462703.1, ENST00000481144.5, ENST00000544492.5, ENST00000544904.3
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGTTGGCGCCTCCCCCTaGAACGGCCCGGCCTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISVGASP*NGPASA Trigger: CGCCGAGGCCGGGCCGTTTCAGGGGGAGGCGCCAAC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCGGGATGCGCTCGGGTaGCCGGCCGAGACGGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISRDALG*PAETET Trigger: CGTTTCCGTCTCGGCCGGGCACCCGAGCGCATCCCG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCTGGGTAGCGGTTACTaGACGGTCAGGGGCCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISLGSGY*TVRGPA Trigger: CGCCGGGCCCCTGACCGTGCAGTAACCGCTACCCAG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCACAAGAGGAGGGGGCTaGCGACGGCGTCTCGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISTRGGG*RRRLAP Trigger: AGGGGCGAGACGCCGTCGCCAGCCCCCTCCTCTTGT...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGGCGCCGCGATGAGTTaGCGCCTCCCCCTGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISGAAMS*RLPLKR Trigger: CCGTTTCAGGGGGAGGCGCCAACTCATCGCGGCGCC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGTCCGCTCCGCCTCCTaGGTAGCGGTTACTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISVRSAS*VAVTAR Trigger: CCGTGCAGTAACCGCTACCCAGGAGGCGGAGCGGAC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGCTGGTTGCCACTGTTaGCGAGTCCAAGCTGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISAGCHC*RVQAAR Trigger: ACGGGCAGCTTGGACTCGGCAACAGTGGCAACCAGC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCCCCGTGTCTACTACTaGCATGCAGCACATCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISPRVYY*HAAHLP Trigger: GGGCAGATGTGCTGCATGGCAGTAGTAGACACGGGG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCCCTCTGGACACGGATaGCTTGCAAAGCTGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISPSGHG*LAKLPL Trigger: GAGTGGCAGCTTTGCAAGGCATCCGTGTCCAGAGGG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCTGCAAGGGGTTGGCTaGTTGCCACTGTTGCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISLQGVG*LPLLPS Trigger: ACTCGGCAACAGTGGCAACCAGCCAACCCCTTGCAG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCCACAGGCGACCCTCTaGACACGGATGCCTTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISPQATL*TRMPCK Trigger: TTTGCAAGGCATCCGTGTCCAGAGGGTCGCCTGTGG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544904.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCCGAGAGCAGAGCGATaGCATTCTCCTCGCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISPRAER*HSPRRC Trigger: GCATCTGCGAGGAGAATGCCATCGCTCTGCTCTCGG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCAAGGGGTTGGCTGGTTaGCACTGTTGCCGAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISKGLAG*HCCRVQ Trigger: TTGGACTCGGCAACAGTGGCAACCAGCCAACCCCTT...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGATGCCTTGCAAAGCTaGCACTCTGCAAGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISDALQS*HSARGW Trigger: CCAACCCCTTGCAGAGTGGCAGCTTTGCAAGGCATC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTTTGTAGGCAGCCAGTaGCTCTTCGAGGGATTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISFVGSQ*LFEGLA Trigger: AGCCAATCCCTCGAAGAGTCACTGGCTGCCTACAAA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTCCGAGGTTCAATGGTaGTCTGGACGTCACCTAACC | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISSEVQW*SGRHLT Trigger: GGTTAGGTGACGTCCAGAGCACCATTGAACCTCGGA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGCCATGCAGCACATCTaGCCACATGCTATGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISAMQHI*PHAMVT Trigger: TGTGACCATAGCATGTGGGCAGATGTGCTGCATGGC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTGGACACGGATGCCTTaGAAAGCTGCCACTCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISWTRMP*KAATLQ Trigger: TTGCAGAGTGGCAGCTTTGCAAGGCATCCGTGTCCA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGTCTCCGAGGTTCAATaGTGCTCTGGACGTCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISVSEVQ*CSGRHL Trigger: TAGGTGACGTCCAGAGCACCATTGAACCTCGGAGAC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCAGGGCACTAAACCATaGTTAGTTGTCCCATTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISQGTKP*LVVPLP Trigger: GGGCAATGGGACAACTAATCATGGTTTAGTGCCCTG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544904.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTTAGCCCTTGGGCCTTaGCAATTTAATTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISLALGP*QFNCQG Trigger: GCCCTGGCAATTAAATTGTCAAGGCCCAAGGGCTAA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGGTTCAATGGTGCTCTaGACGTCACCTAACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISGSMVL*TSPNPK Trigger: TTTGGGGTTAGGTGACGTCCAGAGCACCATTGAACC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGTGGTATCAGCCAGCTaGATAATGGAACATTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISVVSAS*IMEHLG Trigger: GCCCAAATGTTCCATTATTCAGCTGGCTGATACCAC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCACTGTGCTGAGTGCTaGAAATGTGGTAAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISHCAEC*KCGKDR Trigger: TCTGTCCTTACCACATTTTCAGCACTCAGCACAGTG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCTTCGAGGGATTGGCTaGTTAACTGTTGTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISLRGIG*LTVVAR Trigger: CCTTGCAACAACAGTTAATCAGCCAATCCCTCGAAG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544492.5 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTCCTCGCAGATGCCTTaGTTGATAGTTTGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISSSQMP*LIVCWQ Trigger: CTGCCAACAAACTATCAAGCAAGGCATCTGCGAGGA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTGTGGAGTGACAGGCTaGAATCTCGATAATCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISCGVTG*NLDNPS Trigger: AGAGGGATTATCGAGATTGCAGCCTGTCACTCCACA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544492.5 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGCACATCTGCCCACATaGTATGGTCACAACTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISAHLPT*YGHNYF Trigger: AAAGTAGTTGTGACCATAGCATGTGGGCAGATGTGC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCCAAAGACACAAGCCTaGCGAATTAACTGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISPKTQA*RINCSS Trigger: AGAACTACAGTTAATTCGTCAGGCTTGTGTCTTTGG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGCTCACATCGAATCTTaGGAAGGACTTTATGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISAHIES*EGLYVH Trigger: ATGCACATAAAGTCCTTCTCAAGATTCGATGTGAGC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCTCGTTATCTTCCAATaGCGAACGAAAATGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISLVIFQ*RTKMLT Trigger: TGTGAGCATTTTCGTTCGTCATTGGAAGATAACGAG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTTCTCCTTCTGTTGTTaGAAGGACAATATGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISFSFCC*KDNMWT Trigger: GGTCCACATATTGTCCTTGCAACAACAGAAGGAGAA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544904.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCAGAGTAGCCTGTACTaGCTTTGTCAACTTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISQSSLY*LCQLFS Trigger: AGAGAAAAGTTGACAAAGCCAGTACAGGCTACTCTG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430805.6 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCACAGGCAACTTCAATaGCTTGTTTGTTTGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISHRQLQ*LVCLTD Trigger: ATCTGTCAAACAAACAAGTCATTGAAGTTGCCTGTG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544904.3 |
||
| CDS-3UTR TCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCATTTCTGCAAAACCTaGTGTTTGTGTTACTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISHFCKT*CLCYYS Trigger: ACTGTAGTAACACAAACATCAGGTTTTGCAGAAATG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR GCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCAATGACGAACGAAAATaGTCACATCGAATCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISNDERK*SHRILR Trigger: TCTCAAGATTCGATGTGAGCATTTTCGTTCGTCATT...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CCA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTCTGCCCACATGCTATaGTCACAACTACTTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCGKDRQHSLSSYLCGISSAHML*SQLLYF Trigger: AAAATAAAGTAGTTGTGACCATAGCATGTGGGCAGA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS GCA 90 bp | GCGCCTCCCCCTGAAACGGCCCGGCCTCGGCGGGATGCGCTCGGGTaGCCGGCCGAGACGGAAACGAAGGGAGCGCAGACAAGAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: APPPETARPRRDALG*PAETETKGAQTRGG Trigger: CCCTCCTCTTGTCTGCGCTCCCTTCGTTTCCGTCTCGGCCGGGCACCCGAGCGCATCCCGCCGAGGCCGGGCCGTTTCAGGGGGAGGCGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS CCA 90 bp | CCGGCCGAGACGGAAACGAAGGGAGCGCAGACAAGAGGAGGGGGCTaGCGACGGCGTCTCGCCCCTCCTCTCCTCCCTAGGCTGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PAETETKGAQTRGGG*RRRLAPPLLPRLPT Trigger: GGTGGGCAGCCTAGGGAGGAGAGGAGGGGCGAGACGCCGTCGCCAGCCCCCTCCTCTTGTCTGCGCTCCCTTCGTTTCCGTCTCGGCCGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTCGCAGGCCGGAGCCTaGTCCGCTCCGCCTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISSQAGA*SAPPPG Trigger: CCCAGGAGGCGGAGCGGACAAGGCTCCGGCCTGCGA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCGGCGCCGCGATGAGTaGGCGCCTCCCCCTGAAACG | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISRRRDE*APPPET Trigger: CGTTTCAGGGGGAGGCGCCAACTCATCGCGGCGCCG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGGCTGGTTGCCACTGTaGCCGAGTCCAAGCTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISGWLPL*PSPSCP Trigger: CGGGCAGCTTGGACTCGGCAACAGTGGCAACCAGCC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCAAGGGGTTGGCTGGTaGCCACTGTTGCCGAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISQGVGW*PLLPSP Trigger: TGGACTCGGCAACAGTGGCAACCAGCCAACCCCTTG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCTGGACACGGATGCCTaGCAAAGCTGCCACTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISLDTDA*QSCHSA Trigger: TGCAGAGTGGCAGCTTTGCAAGGCATCCGTGTCCAG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCGTAGCCTGTACTGGCTaGCCACTGTCTCCAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISVACTG*PLSPEK Trigger: TTTCTCTGGAGACAGTGGCAAGCCAGTACAGGCTAC...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344532.8 |
||
| CDS TCA 90 bp | ACCACACACATTAGAGTGTGTCTGGAGTTAGGTGGCTGGGCAGTTTaGTGCCTCACAGATCTCAAATGCCCCAAAGCTCTTCCTTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TTHIRVCLELGGWAV*CLTDLKCPKALPFY Trigger: ATAAAAAGGAAGAGCTTTGGGGCATTTGAGATCTGTGAGGCATCAAACTGCCCAGCCACCTAACTCCAGACACACTCTAATGTGTGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000462703.1 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTCCTGGGCAGTCCCTTaGTCAACTTTTCTCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISSWAVP*STFLWD Trigger: ATCCCAGAGAAAAGTTGACAAAGGGACTGCCCAGGA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000344532.8 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTCGCAGATGCCTTGCTaGATAGTTTGTTGGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISSQMPC*IVCWQS Trigger: GCTCTGCCAACAAACTATCAAGCAAGGCATCTGCGA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCTCCTCGCAGATGCCTaGCTTGATAGTTTGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISLLADA*LDSLLA Trigger: TGCCAACAAACTATCAAGCAAGGCATCTGCGAGGAG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCAACAGCCACAGCAGTTaGTGCCAAGCACAAAAATCT | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISNSHSS*CQAQKS Trigger: AGATTTTTGTGCTTGGCACAAACTGCTGTGGCTGTT...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCCTTCTCCTTCTGTTGTaGCAAGGACAATATGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISLLLLL*QGQYVD Trigger: GTCCACATATTGTCCTTGCAACAACAGAAGGAGAAG...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCAGACTTCTCCTTCTGTaGTTGCAAGGACAATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISRLLLL*LQGQYV Trigger: CACATATTGTCCTTGCAACAACAGAAGGAGAAGTCT...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCTGCTCACATCGAATCTaGAGAAGGACTTTATGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISCSHRI*RRTLCA Trigger: TGCACATAAAGTCCTTCTCAAGATTCGATGTGAGCA...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS-3UTR CAA 90 bp | AAATGTGGTAAGGACAGACAGCACTCCTTGTCAAGCTATCTATGTGGTATCAGCAATTGCCAGGGCCTTTaGTCAATTCTAAACAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: KCGKDRQHSLSSYLCGISNCQGL*SILNNV Trigger: AACATTGTTTAGAATTGACAAAAGGCCCTGGCAATT...GCTGATACCACATAGATAGCTTGACAAGGAGTGCTGTCTGTCCTTACCACATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS CAA 72 bp | GTTACTGCACGGTCAGGGGCCCGGCGCCGCGATGAGTaGGCGCCTCCCCCTGAAACGGCCCGGCCTCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VTARSGARRRDE*APPPETARPRR Trigger: CCGCCGAGGCCGGGCCGTTTCAGGGGGAGGCGCCAACTCATCGCGGCGCCGGGCCCCTGACCGTGCAGTAAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000430805.6 ENST00000481144.5 ENST00000544492.5 ENST00000544904.3 |
||
| CDS CAA 90 bp | TGGGTAGCGGTTACTGCACGGTCAGGGGCCCGGCGCCGCGATGAGTaGGCGCCTCCCCCTGAAACGGCCCGGCCTCGGCGGGATGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WVAVTARSGARRRDE*APPPETARPRRDAL Trigger: GAGCGCATCCCGCCGAGGCCGGGCCGTTTCAGGGGGAGGCGCCAACTCATCGCGGCGCCGGGCCCCTGACCGTGCAGTAACCGCTACCCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000430805.6 ENST00000481144.5 ENST00000544492.5 ENST00000544904.3 |
||
| CDS CCA 72 bp | ACGGAAACGAAGGGAGCGCAGACAAGAGGAGGGGGCTaGCGACGGCGTCTCGCCCCTCCTCTCCTCCCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: TETKGAQTRGGG*RRRLAPPLLPR Trigger: CCTAGGGAGGAGAGGAGGGGCGAGACGCCGTCGCCAGCCCCCTCCTCTTGTCTGCGCTCCCTTCGTTTCCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||
| CDS GCA 72 bp | TGTGTGCGTAGCCACAGGCGACCCTCTGGACACGGATaGCTTGCAAAGCTGCCACTCTGCAAGGGGTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CVRSHRRPSGHG*LAKLPLCKGLA Trigger: AGCCAACCCCTTGCAGAGTGGCAGCTTTGCAAGGCATCCGTGTCCAGAGGGTCGCCTGTGGCTACGCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544904.3 |
||
| CDS GCA 72 bp | ACAGGCTGCAATCTCGATAATCCCTCTGGACACGGATaGCTTGCAAAGCTGCCACTCTGCAAGGGGTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGCNLDNPSGHG*LAKLPLCKGLA Trigger: AGCCAACCCCTTGCAGAGTGGCAGCTTTGCAAGGCATCCGTGTCCAGAGGGATTATCGAGATTGCAGCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544492.5 |
||
| CDS GCA 72 bp | ACCTCCCCCGTGTCTACTACTGCCATGCAGCACATCTaGCCACATGCTATGGTCACAACTACTTTATTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TSPVSTTAMQHI*PHAMVTTTLFC Trigger: ACAAAATAAAGTAGTTGTGACCATAGCATGTGGGCAGATGTGCTGCATGGCAGTAGTAGACACGGGGGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000344532.8 ENST00000430805.6 ENST00000544492.5 ENST00000544904.3 |
||