Pregenerated sensors for RBM43 (Homo sapiens)
Ensembl gene IDs: ENSG00000184898Ensembl transcript IDs: ENST00000331426.6, ENST00000409092.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTACAGCAAGCAGTTTCAGTAGCCAGGCTCACAGAGAATTACATTCTTGGAGCAAGGTGGACGTTGCAGTaGGCCGAGATCACGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: LQQAVSVARLTENYILGARWTLQ*AEITPL Trigger: CAGTGGCGTGATCTCGGCTCACTGCAACGTCCACCT...TGCTCCAAGAATGTAATTCTCTGTGAGCCTGGCTACTGAAACTGCTTGCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| 3UTR CAA 90 bp | GACGACGCCTCTACCGCCACCAGGTCAACAAAAACGTACTTGCTTTaGCATTTCCGGGACTCTAGCATTTCAGAGCAGGAATTAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: DDASTATRSTKTYLL*HFRDSSISEQELKA Trigger: GGCCTTTAATTCCTGCTCTGAAATGCTAGAGTCCCGGAAATGCAAAAGCAAGTACGTTTTTGTTGACCTGGTGGCGGTAGAGGCGTCGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| 3UTR-3UTR CCA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGCCTCATTCATGGCAATaGTCACTGCTCAGCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVPHSWQ*SLLSKR Trigger: TCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGG...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| 3UTR-3UTR TCA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGTTCCCCCTAGCTTCTTaGGTCTGTTTTAGTTGGATG | + |
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Preference number: 2 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVFPLAS*VCFSWM Trigger: CATCCAACTAAAACAGACTCAAGAAGCTAGGGGGAA...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| 3UTR-3UTR CCA 90 bp | CGGGACTCTAGCATTTCAGAGCAGGAATTAAAGGCCTTGCCAAGGCTTTTAAGCCCTGACTTGCGTCCTTaGCTCGAATCGTTCTTATTA | + |
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Preference number: 2 (lower is better) Translates to: RDSSISEQELKALPRLLSPDLRP*LESFLL Trigger: TAATAAGAACGATTCGAGCCAAGGACGCAAGTCAGG...GCTTAAAAGCCTTGGCAAGGCCTTTAATTCCTGCTCTGAAATGCTAGAGTCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| 3UTR-3UTR TCA 90 bp | CCACCAGGTCAACAAAAACGTACTTGCTTTTGCATTTCCGGGACTCTAGCATTTGGCAGACATAAGACATaGGGATGTCTTCCTGACTTG | + |
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Preference number: 2 (lower is better) Translates to: PPGQQKRTCFCISGTLAFGRHKT*GCLPDL Trigger: CAAGTCAGGAAGACATCCTCATGTCTTATGTCTGCC...AAATGCTAGAGTCCCGGAAATGCAAAAGCAAGTACGTTTTTGTTGACCTGGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| 3UTR-3UTR TCA 90 bp | AAAATTAGTCCTAGAGTTACAGCAAGTTATCTCAGCAGCTATAGACAAAACTGGGAGGATAGTCAACACTaGCAAAGAAGGATGACTATA | + |
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Preference number: 2 (lower is better) Translates to: KISPRVTASYLSSYRQNWEDSQH*QRRMTI Trigger: TATAGTCATCCTTCTTTGTCAGTGTTGACTATCCTC...CCAGTTTTGTCTATAGCTGCTGAGATAACTTGCTGTAACTCTAGGACTAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| 3UTR-3UTR GCA 90 bp | AAAATTAGTCCTAGAGTTACAGCAAGTTATCTCAGCAGCTATAGACAAAACTGGTTCCCCAGTGATTTTTaGCAGTATTCTAATTCTACA | + |
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Preference number: 2 (lower is better) Translates to: KISPRVTASYLSSYRQNWFPSDF*QYSNST Trigger: TGTAGAATTAGAATACTGGCAAAAATCACTGGGGAA...CCAGTTTTGTCTATAGCTGCTGAGATAACTTGCTGTAACTCTAGGACTAATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| 3UTR-3UTR CCA 90 bp | AAAATTAGTCCTAGAGTTACAGCAAGTTATCTCAGCAGCTATAGACAAAACTGGAGAGAATTACATTCTTaGAGCAATATTATGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: KISPRVTASYLSSYRQNWRELHS*SNIMCP Trigger: GGGACACATAATATTGCTCCAAGAATGTAATTCTCT...CCAGTTTTGTCTATAGCTGCTGAGATAACTTGCTGTAACTCTAGGACTAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| 3UTR TCA 72 bp | CAAGAGATACTTACTGGAGGGAGAAAGGATTACCTGTaGAAGTGGTGGGGGTGTAGGGGGTTCAAAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: QEILTGGRKDYL*KWWGCRGFKGP Trigger: GGGCCCTTTGAACCCCCTACACCCCCACCACTTTCACAGGTAATCCTTTCTCCCTCCAGTAAGTATCTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| 3UTR-3UTR CAA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGCAAAGTTTGGTGAGTTaGCTGGGCGCAGTGGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVQSLVS*LGAVAH Trigger: GTGAGCCACTGCGCCCAGCAAACTCACCAAACTTTG...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGTTTATTTTCAATGACGACGCCTCTACCGCCACCAGGTCAACAAAAACGCAGGAATTAAAGGCCTaGCCAAGGCTTTTAAGCGAT | + |
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Preference number: 3 (lower is better) Translates to: QLFIFNDDASTATRSTKTQELKA*PRLLSD Trigger: ATCGCTTAAAAGCCTTGGCAAGGCCTTTAATTCCTG...CGTTTTTGTTGACCTGGTGGCGGTAGAGGCGTCGTCATTGAAAATAAACAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| 3UTR CCA 72 bp | TTATTCCTTAGATATTATCTGTGTAATCAGATAGACTaGGCTAAGCCACAGCCTCATTCTTTGTCAACTGGA | + |
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Preference number: 3 (lower is better) Translates to: LFLRYYLCNQID*AKPQPHSLSTG Trigger: TCCAGTTGACAAAGAATGAGGCTGTGGCTTAGCCCAGTCTATCTGATTACACAGATAATATCTAAGGAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | CGCACCAAGGCAGACATAAGACATGAGGATGTCTTCCTGACTTGCGTCCTTGGCGGCGTCCCCGTCGCCTaGGCAGTGGGTGTGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: RTKADIRHEDVFLTCVLGGVPVA*AVGVGG Trigger: ACCTCCCACACCCACTGCCCAGGCGACGGGGACGCC...GCCAAGGACGCAAGTCAGGAAGACATCCTCATGTCTTATGTCTGCCTTGGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CCA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGGCGGAACGCAGGCGATaGGGAGAGGAGCGAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVAERRR*GEERAG Trigger: GCCTGCTCGCTCCTCTCCCCATCGCCTGCGTTCCGC...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | TCCTTGGCTCGAATCGTTCTTATTAGCCCTTTTCAAAAGGCAGCTGTGACCTCCGCAATGCCGCCACCATaGCGGAGGGGAGACGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SLARIVLISPFQKAAVTSAMPPP*RRGDAP Trigger: GGGCGCGTCTCCCCTCCGCCATGGTGGCGGCATTGC...GGAGGTCACAGCTGCCTTTTGAAAAGGGCTAATAAGAACGATTCGAGCCAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CCA 90 bp | AAGGCAGACATAAGACATGAGGATGTCTTCCTGACTTGCGTCCTTGGCTCGAATCCGTCGCCTGGGCAGTaGGTGTGGGAGGTGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: KADIRHEDVFLTCVLGSNPSPGQ*VWEVTA Trigger: GGCTGTCACCTCCCACACCCACTGCCCAGGCGACGG...ATTCGAGCCAAGGACGCAAGTCAGGAAGACATCCTCATGTCTTATGTCTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR GCA 90 bp | CTTGCGTCCTTGGCTCGAATCGTTCTTATTAGCCCTTTTCAAAAGGCAGCTGTGTTCAGGAGCGCGCAATaGCGCCACCATGGCGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LASLARIVLISPFQKAAVFRSAQ*RHHGGG Trigger: CCCTCCGCCATGGTGGCGGCATTGCGCGCTCCTGAA...CACAGCTGCCTTTTGAAAAGGGCTAATAAGAACGATTCGAGCCAAGGACGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CCA 90 bp | GCTAGCCTCATTCATGGCAATGGTCACTGCTCAGCAAGAGAAAGCAGCCCTTATAGCCTCCCGAGTAGGTaGGACTACAGGCGCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: ASLIHGNGHCSARESSPYSLPSR*DYRRPP Trigger: TGGTGGGCGCCTGTAGTCCCACCTACTCGGGAGGCT...ATAAGGGCTGCTTTCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGGCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | GCTAGCCTCATTCATGGCAATGGTCACTGCTCAGCAAGAGAAAGCAGCCCTTATAGGTGGACGTTGCAGTaGGCCGAGATCACGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: ASLIHGNGHCSARESSPYRWTLQ*AEITPL Trigger: CAGTGGCGTGATCTCGGCTCACTGCAACGTCCACCT...ATAAGGGCTGCTTTCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGGCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR GCA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGCCAGGAGGTGGACGTTaGAGTGAGCCGAGATCACGC | + |
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Preference number: 4 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVPGGGR*SEPRSR Trigger: GCGTGATCTCGGCTCACTGCAACGTCCACCTCCTGG...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR GCA 90 bp | GCTAGCCTCATTCATGGCAATGGTCACTGCTCAGCAAGAGAAAGCAGCCCTTATGCAGTCTTGGCTCACTaGAAGCTCCACCTCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: ASLIHGNGHCSARESSPYAVLAH*KLHLPG Trigger: ACCCGGGAGGTGGAGCTTGCAGTGAGCCAAGACTGC...ATAAGGGCTGCTTTCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGGCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGTCAAAACTGATGCCATaGCGGAGGGGAGACGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVSKLMP*RRGDAP Trigger: GGGCGCGTCTCCCCTCCGCCATGGCATCAGTTTTGA...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR GCA 90 bp | GCCTCTACCGCCACCAGGTCAACAAAAACGTACTTGCTTTTGCATTTCCGGGACGGAGCGGGCCTATACTaGACCGCCGTACGTGAATTT | + |
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Preference number: 4 (lower is better) Translates to: ASTATRSTKTYLLLHFRDGAGLY*TAVREF Trigger: AAATTCACGTACGGCGGTGCAGTATAGGCCCGCTCC...GTCCCGGAAATGCAAAAGCAAGTACGTTTTTGTTGACCTGGTGGCGGTAGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR GCA 90 bp | CGCACCAAGGCAGACATAAGACATGAGGATGTCTTCCTGACTTGCGTCCTTGGCGATGTCTTCCTGACTTaGGTCCTTGGCTCGAATCGT | + |
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Preference number: 4 (lower is better) Translates to: RTKADIRHEDVFLTCVLGDVFLT*VLGSNR Trigger: ACGATTCGAGCCAAGGACGCAAGTCAGGAAGACATC...GCCAAGGACGCAAGTCAGGAAGACATCCTCATGTCTTATGTCTGCCTTGGTGCG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR TCA 90 bp | GCTAGCCTCATTCATGGCAATGGTCACTGCTCAGCAAGAGAAAGCAGCCCTTATCTTGACATTCAAAACTaGTGCCATGGCGGAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASLIHGNGHCSARESSPYLDIQN*CHGGGE Trigger: CTCCCCTCCGCCATGGCATCAGTTTTGAATGTCAAG...ATAAGGGCTGCTTTCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGGCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGTCCTTCAAAGTTTGGTaGGTTTGCTGGGCGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVSFKVW*VCWAQW Trigger: CCACTGCGCCCAGCAAACTCACCAAACTTTGAAGGA...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | CGCACCAAGGCAGACATAAGACATGAGGATGTCTTCCTGACTTGCGTCCTTGGCGTTGTTTATTTTCAATaGCGACGCCTCTACCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RTKADIRHEDVFLTCVLGVVYFQ*RRLYRH Trigger: GTGGCGGTAGAGGCGTCGTCATTGAAAATAAACAAC...GCCAAGGACGCAAGTCAGGAAGACATCCTCATGTCTTATGTCTGCCTTGGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR TCA 90 bp | TCTACCGCCACCAGGTCAACAAAAACGTACTTGCTTTTGCATTTCCGGGACTCTATGAGGATGTCTTCCTaGCTTGCGTCCTTGGCTCGA | + |
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Preference number: 4 (lower is better) Translates to: STATRSTKTYLLLHFRDSMRMSS*LASLAR Trigger: TCGAGCCAAGGACGCAAGTCAGGAAGACATCCTCAT...AGAGTCCCGGAAATGCAAAAGCAAGTACGTTTTTGTTGACCTGGTGGCGGTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR GCA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGCATGGCAATGGTCACTaGTCAGCAAGAGAAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVHGNGH*SARESS Trigger: GCTGCTTTCTCTTGCTGAGCAGTGACCATTGCCATG...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | TTACAGCAAGCAGTTTCAGTAGCCAGGCTCACAGAGAATTACATTCTTGGAGCAAAGATTAGCCGGGCGTaGTGGTGGGCACCTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: LQQAVSVARLTENYILGAKISRA*WWAPVV Trigger: GACTACAGGTGCCCACCACCACGCCCGGCTAATCTT...TGCTCCAAGAATGTAATTCTCTGTGAGCCTGGCTACTGAAACTGCTTGCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | GCTAGCCTCATTCATGGCAATGGTCACTGCTCAGCAAGAGAAAGCAGCCCTTATGTATTAGTAAAGCCCTaGGGAGCTGGCAAGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: ASLIHGNGHCSARESSPYVLVKP*GAGKLQ Trigger: TTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATAC...ATAAGGGCTGCTTTCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGGCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGCAAAGGGCCCCAACATaGGTACCTCATGCCATAACT | + |
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Preference number: 4 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVQRAPT*VPHAIT Trigger: AGTTATGGCATGAGGTACCCATGTTGGGGCCCTTTG...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | CCACCAGGTCAACAAAAACGTACTTGCTTTTGCATTTCCGGGACTCTAGCATTTCTAGTCCTGAGCCTCTaGAGCGGGCCTATACTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PPGQQKRTCFCISGTLAFLVLSL*SGPILH Trigger: GTGCAGTATAGGCCCGCTCCAGAGGCTCAGGACTAG...AAATGCTAGAGTCCCGGAAATGCAAAAGCAAGTACGTTTTTGTTGACCTGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR TCA 90 bp | GCTAGCCTCATTCATGGCAATGGTCACTGCTCAGCAAGAGAAAGCAGCCCTTATCTTGACAGCCAGAAATaGTCCTTCCACGGAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: ASLIHGNGHCSARESSPYLDSQK*SFHGDS Trigger: AGAATCTCCGTGGAAGGATCATTTCTGGCTGTCAAG...ATAAGGGCTGCTTTCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGGCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | TTACAGCAAGCAGTTTCAGTAGCCAGGCTCACAGAGAATTACATTCTTGGAGCAATGGTCTCAATCTCCTaGCCTTGTGATCCACCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LQQAVSVARLTENYILGAMVSIS*PCDPPA Trigger: GGCGGGTGGATCACAAGGTCAGGAGATTGAGACCAT...TGCTCCAAGAATGTAATTCTCTGTGAGCCTGGCTACTGAAACTGCTTGCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | ACCAGGTCAACAAAAACGTACTTGCTTTTGCATTTCCGGGACTCTAGCATTTCACTGCACCGCCGTACGTaGATTTCAGGAGCGCGCAAT | + |
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Preference number: 4 (lower is better) Translates to: TRSTKTYLLLHFRDSSISLHRRT*ISGARN Trigger: ATTGCGCGCTCCTGAAATTCACGTACGGCGGTGCAG...TGAAATGCTAGAGTCCCGGAAATGCAAAAGCAAGTACGTTTTTGTTGACCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR GCA 90 bp | TTGGAGCAATATTATGTGTCCCAAGTACTTTTTCCCCCTAGCTTCTTGAGTCTGCCGAGATCACGCCACTaGACTCCAGCCTGGACAACA | + |
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Preference number: 4 (lower is better) Translates to: LEQYYVSQVLFPPSFLSLPRSRH*TPAWTT Trigger: TGTTGTCCAGGCTGGAGTGCAGTGGCGTGATCTCGG...CAGACTCAAGAAGCTAGGGGGAAAAAGTACTTGGGACACATAATATTGCTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | GCTAGCCTCATTCATGGCAATGGTCACTGCTCAGCAAGAGAAAGCAGCCCTTATCCATCCACTTTCTCCTaGCTCAGAATGTGGAATTTT | + |
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Preference number: 4 (lower is better) Translates to: ASLIHGNGHCSARESSPYPSTFS*LRMWNF Trigger: AAAATTCCACATTCTGAGTCAGGAGAAAGTGGATGG...ATAAGGGCTGCTTTCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGGCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | AAAATTAGTCCTAGAGTTACAGCAAGTTATCTCAGCAGCTATAGACAAAACTGGAATCTCCTGACCTTGTaGTCCACCCGCCTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KISPRVTASYLSSYRQNWNLLTL*STRLGL Trigger: GAGGCCGAGGCGGGTGGATCACAAGGTCAGGAGATT...CCAGTTTTGTCTATAGCTGCTGAGATAACTTGCTGTAACTCTAGGACTAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGCTCTGTAGATTCCTCTaGGGATTTTGTCTATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVLCRFL*GFCLFH Trigger: GTGGAATAGACAAAATCCCCAGAGGAATCTACAGAG...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | TCCTTGGCTCGAATCGTTCTTATTAGCCCTTTTCAAAAGGCAGCTGTGACCTCCCCTGACTTGCGTCCTTaGCTCGAATCGTTCTTATTA | + |
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Preference number: 4 (lower is better) Translates to: SLARIVLISPFQKAAVTSPDLRP*LESFLL Trigger: TAATAAGAACGATTCGAGCCAAGGACGCAAGTCAGG...GGAGGTCACAGCTGCCTTTTGAAAAGGGCTAATAAGAACGATTCGAGCCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| 3UTR CAA 72 bp | TCTACCGCCACCAGGTCAACAAAAACGTACTTGCTTTaGCATTTCCGGGACTCTAGCATTTCAGAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: STATRSTKTYLL*HFRDSSISEQE Trigger: TTCCTGCTCTGAAATGCTAGAGTCCCGGAAATGCAAAAGCAAGTACGTTTTTGTTGACCTGGTGGCGGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR TCA 90 bp | GCTAGCCTCATTCATGGCAATGGTCACTGCTCAGCAAGAGAAAGCAGCCCTTATTGGCATTTACAGAGCTaGAGATCTTGTCACCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: ASLIHGNGHCSARESSPYWHLQS*RSCHQN Trigger: ATTTTGGTGACAAGATCTTCAGCTCTGTAAATGCCA...ATAAGGGCTGCTTTCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGGCTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | TTGGAGCAATATTATGTGTCCCAAGTACTTTTTCCCCCTAGCTTCTTGAGTCTGAGAAAGGATTACCTGTaGAAGTGGTGGGGGTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LEQYYVSQVLFPPSFLSLRKDYL*KWWGCR Trigger: CCTACACCCCCACCACTTTCACAGGTAATCCTTTCT...CAGACTCAAGAAGCTAGGGGGAAAAAGTACTTGGGACACATAATATTGCTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | TTACAGCAAGCAGTTTCAGTAGCCAGGCTCACAGAGAATTACATTCTTGGAGCATGGGATAAAGCAGTTTaGGTCACTCACCAGTGCACT | + |
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Preference number: 4 (lower is better) Translates to: LQQAVSVARLTENYILGAWDKAV*VTHQCT Trigger: AGTGCACTGGTGAGTGACTCAAACTGCTTTATCCCA...TGCTCCAAGAATGTAATTCTCTGTGAGCCTGGCTACTGAAACTGCTTGCTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR GCA 90 bp | AAGGCAGACATAAGACATGAGGATGTCTTCCTGACTTGCGTCCTTGGCTCGAATAAACGTACTTGCTTTTaGATTTCCGGGACTCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KADIRHEDVFLTCVLGSNKRTCF*ISGTLA Trigger: TGCTAGAGTCCCGGAAATGCAAAAGCAAGTACGTTT...ATTCGAGCCAAGGACGCAAGTCAGGAAGACATCCTCATGTCTTATGTCTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CCA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGACTAAAAAGGTCAACTaGAAGACCAGCAACTACAAC | + |
|
Preference number: 4 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVTKKVN*KTSNYN Trigger: GTTGTAGTTGCTGGTCTTCCAGTTGACCTTTTTAGT...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | TTTATTTTCAATGACGACGCCTCTACCGCCACCAGGTCAACAAAAACGTACTTGTTCAAAAGGCAGCTGTaGCCTCCATTTCTGGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: FIFNDDASTATRSTKTYLFKRQL*PPFLAN Trigger: ATTAGCCAGAAATGGAGGTCACAGCTGCCTTTTGAA...CAAGTACGTTTTTGTTGACCTGGTGGCGGTAGAGGCGTCGTCATTGAAAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR GCA 90 bp | TTACAGCAAGCAGTTTCAGTAGCCAGGCTCACAGAGAATTACATTCTTGGAGCAAACATGGGTACCTCATaGCATAACTCCAAAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LQQAVSVARLTENYILGANMGTS*HNSKGQ Trigger: TTGGCCTTTGGAGTTATGGCATGAGGTACCCATGTT...TGCTCCAAGAATGTAATTCTCTGTGAGCCTGGCTACTGAAACTGCTTGCTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | AAAATTAGTCCTAGAGTTACAGCAAGTTATCTCAGCAGCTATAGACAAAACTGGGCAGTAGTGCAGTCTTaGCTCACTGCAAGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KISPRVTASYLSSYRQNWAVVQS*LTASST Trigger: GGTGGAGCTTGCAGTGAGCCAAGACTGCACTACTGC...CCAGTTTTGTCTATAGCTGCTGAGATAACTTGCTGTAACTCTAGGACTAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | TTACAGCAAGCAGTTTCAGTAGCCAGGCTCACAGAGAATTACATTCTTGGAGCATGGGTTTCAAAGGACTaGAGCTTAAACTCGGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LQQAVSVARLTENYILGAWVSKD*SLNSGF Trigger: AAATCCCGAGTTTAAGCTTCAGTCCTTTGAAACCCA...TGCTCCAAGAATGTAATTCTCTGTGAGCCTGGCTACTGAAACTGCTTGCTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | TTGGAGCAATATTATGTGTCCCAAGTACTTTTTCCCCCTAGCTTCTTGAGTCTGTTCCCCCTAGCTTCTTaGGTCTGTTTTAGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LEQYYVSQVLFPPSFLSLFPLAS*VCFSWM Trigger: CATCCAACTAAAACAGACTCAAGAAGCTAGGGGGAA...CAGACTCAAGAAGCTAGGGGGAAAAAGTACTTGGGACACATAATATTGCTCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | TTACAGCAAGCAGTTTCAGTAGCCAGGCTCACAGAGAATTACATTCTTGGAGCATTTGTATCCCACTTCTaGCACCATGCATGTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQQAVSVARLTENYILGAFVSHF*HHACQS Trigger: ACTTTGACATGCATGGTGTCAGAAGTGGGATACAAA...TGCTCCAAGAATGTAATTCTCTGTGAGCCTGGCTACTGAAACTGCTTGCTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | ACCAGGTCAACAAAAACGTACTTGCTTTTGCATTTCCGGGACTCTAGCATTTCATGTGACCTCCATTTCTaGCTAATCAGGCCACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRSTKTYLLLHFRDSSISCDLHF*LIRPLL Trigger: CAAAAGTGGCCTGATTAGCCAGAAATGGAGGTCACA...TGAAATGCTAGAGTCCCGGAAATGCAAAAGCAAGTACGTTTTTGTTGACCTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR TCA 90 bp | AAAAGTGTTTTAACTTCTCCAAATCCTAGTTTCTTCCGCTGTAACATGAGGATATCCAAACCTCGCAGCTaGGGTCAACAGGGGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSVLTSPNPSFFRCNMRISKPRS*GQQGEN Trigger: ATTTTCCCCCTGTTGACCTCAGCTGCGAGGTTTGGA...TATCCTCATGTTACAGCGGAAGAAACTAGGATTTGGAGAAGTTAAAACACTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR GCA 90 bp | GACTCTAGCATTTCAGAGCAGGAATTAAAGGCCTTGCCAAGGCTTTTAAGCGATCAACAAAAACGTACTTaGTTTTGCATTTCCGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: DSSISEQELKALPRLLSDQQKRT*FCISGT Trigger: AGTCCCGGAAATGCAAAAGCAAGTACGTTTTTGTTG...ATCGCTTAAAAGCCTTGGCAAGGCCTTTAATTCCTGCTCTGAAATGCTAGAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CCA 90 bp | TTACAGCAAGCAGTTTCAGTAGCCAGGCTCACAGAGAATTACATTCTTGGAGCACATATGCAACTCCCTTaGTTCTTGTCGGATATATCA | + |
|
Preference number: 4 (lower is better) Translates to: LQQAVSVARLTENYILGAHMQLP*FLSDIS Trigger: TGATATATCCGACAAGAACCAAGGGAGTTGCATATG...TGCTCCAAGAATGTAATTCTCTGTGAGCCTGGCTACTGAAACTGCTTGCTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | AAAATTAGTCCTAGAGTTACAGCAAGTTATCTCAGCAGCTATAGACAAAACTGGGCAAGCTCCAACTGGTaGGCAATGGCCATAGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KISPRVTASYLSSYRQNWASSNW*AMAIGK Trigger: TTTACCTATGGCCATTGCCCACCAGTTGGAGCTTGC...CCAGTTTTGTCTATAGCTGCTGAGATAACTTGCTGTAACTCTAGGACTAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | TTGGAGCAATATTATGTGTCCCAAGTACTTTTTCCCCCTAGCTTCTTGAGTCTGGAGGATAGTCAACACTaGCAAAGAAGGATGACTATA | + |
|
Preference number: 4 (lower is better) Translates to: LEQYYVSQVLFPPSFLSLEDSQH*QRRMTI Trigger: TATAGTCATCCTTCTTTGTCAGTGTTGACTATCCTC...CAGACTCAAGAAGCTAGGGGGAAAAAGTACTTGGGACACATAATATTGCTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | AGGATAAATTTTGAATTTGCTAAGACAAGAATTCGCACCAAGGCAGACATAAGAGGCAGACATAAGACATaGGGATGTCTTCCTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: RINFEFAKTRIRTKADIRGRHKT*GCLPDL Trigger: CAAGTCAGGAAGACATCCTCATGTCTTATGTCTGCC...TCTTATGTCTGCCTTGGTGCGAATTCTTGTCTTAGCAAATTCAAAATTTATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CCA 90 bp | AAAAGTGTTTTAACTTCTCCAAATCCTAGTTTCTTCCGCTGTAACATGAGGATACCTCATTCATGGCAATaGTCACTGCTCAGCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSVLTSPNPSFFRCNMRIPHSWQ*SLLSKR Trigger: TCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGG...TATCCTCATGTTACAGCGGAAGAAACTAGGATTTGGAGAAGTTAAAACACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR TCA 90 bp | AAAAGTGTTTTAACTTCTCCAAATCCTAGTTTCTTCCGCTGTAACATGAGGATAATCTTGTCACCAAAATaGGAGACTCTGAGAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KSVLTSPNPSFFRCNMRIILSPK*ETLRET Trigger: AGTCTCTCTCAGAGTCTCTCATTTTGGTGACAAGAT...TATCCTCATGTTACAGCGGAAGAAACTAGGATTTGGAGAAGTTAAAACACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CCA 90 bp | AAAAGTGTTTTAACTTCTCCAAATCCTAGTTTCTTCCGCTGTAACATGAGGATAAGAGAATTACATTCTTaGAGCAATATTATGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KSVLTSPNPSFFRCNMRIRELHS*SNIMCP Trigger: GGGACACATAATATTGCTCCAAGAATGTAATTCTCT...TATCCTCATGTTACAGCGGAAGAAACTAGGATTTGGAGAAGTTAAAACACTTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS TCA 90 bp | GACGAACGGCGGCGTCCCCGTCGCCTGGGCAGTGGGTGTGGGAGGTaGCAGCCTAGTCCTGAGCCTCTGGAGCGGGCCTATACTGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: DERRRPRRLGSGCGR*QPSPEPLERAYTAP Trigger: CGGTGCAGTATAGGCCCGCTCCAGAGGCTCAGGACTAGGCTGTCACCTCCCACACCCACTGCCCAGGCGACGGGGACGCCGCCGTTCGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS CCA 90 bp | AGCCTGCGAAGCAGCTCCTCGACGAACGGCGGCGTCCCCGTCGCCTaGGCAGTGGGTGTGGGAGGTGACAGCCTAGTCCTGAGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLRSSSSTNGGVPVA*AVGVGGDSLVLSLW Trigger: CCAGAGGCTCAGGACTAGGCTGTCACCTCCCACACCCACTGCCCAGGCGACGGGGACGCCGCCGTTCGTCGAGGAGCTGCTTCGCAGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS TCA 90 bp | CTAGTCCTGAGCCTCTGGAGCGGGCCTATACTGCACCGCCGTACGTaGATTTCAGGAGCGCGCAATGCCGCCACCATGGCGGAGGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVLSLWSGPILHRRT*ISGARNAATMAEGR Trigger: TCTCCCCTCCGCCATGGTGGCGGCATTGCGCGCTCCTGAAATTCACGTACGGCGGTGCAGTATAGGCCCGCTCCAGAGGCTCAGGACTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CAA 90 bp | GCTAGCCTCATTCATGGCAATGGTCACTGCTCAGCAAGAGAAAGCAGCCCTTATTTTGTTCCAGCTCCCTaGGAGGCTACGAAGAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASLIHGNGHCSARESSPYFVPAP*EATKKR Trigger: CCTTTTCTTCGTAGCCTCCAAGGGAGCTGGAACAAA...ATAAGGGCTGCTTTCTCTTGCTGAGCAGTGACCATTGCCATGAATGAGGCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CAA 90 bp | GAAAGTTCATTGGTATTAGTAAAGCCCTGGGGAGCTGGCAAGCTCCAACTGGTGACGGAGATTCTTCCATaGGGTTTCAAAGGACTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESSLVLVKPWGAGKLQLVTEILP*GFKGLK Trigger: CTTCAGTCCTTTGAAACCCAATGGAAGAATCTCCGT...CACCAGTTGGAGCTTGCCAGCTCCCCAGGGCTTTACTAATACCAATGAACTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CAA 90 bp | GCAGGAATTAAAGGCCTTGCCAAGGCTTTTAAGCGATTGATGGAAACAAAACAAGGATGTCTTCCTGACTaGCGTCCTTGGCTCGAATCG | + |
|
Preference number: 5 (lower is better) Translates to: AGIKGLAKAFKRLMETKQGCLPD*RPWLES Trigger: CGATTCGAGCCAAGGACGCAAGTCAGGAAGACATCC...TTGTTTTGTTTCCATCAATCGCTTAAAAGCCTTGGCAAGGCCTTTAATTCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CAA 90 bp | TCCTTGGCTCGAATCGTTCTTATTAGCCCTTTTCAAAAGGCAGCTGTGACCTCCAAAACGTACTTGCTTTaGCATTTCCGGGACTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLARIVLISPFQKAAVTSKTYLL*HFRDSS Trigger: GCTAGAGTCCCGGAAATGCAAAAGCAAGTACGTTTT...GGAGGTCACAGCTGCCTTTTGAAAAGGGCTAATAAGAACGATTCGAGCCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CAA 90 bp | AAAATTAGTCCTAGAGTTACAGCAAGTTATCTCAGCAGCTATAGACAAAACTGGCAAAGTTTGGTGAGTTaGCTGGGCGCAGTGGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KISPRVTASYLSSYRQNWQSLVS*LGAVAH Trigger: GTGAGCCACTGCGCCCAGCAAACTCACCAAACTTTG...CCAGTTTTGTCTATAGCTGCTGAGATAACTTGCTGTAACTCTAGGACTAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAAATCAGTTGTTTATTTTCAATGACGACGCCTCTACCGCCACCAGGTCAGGAATTAAAGGCCTaGCCAAGGCTTTTAAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLKISCLFSMTTPLPPPGQELKA*PRLLSD Trigger: ATCGCTTAAAAGCCTTGGCAAGGCCTTTAATTCCTG...ACCTGGTGGCGGTAGAGGCGTCGTCATTGAAAATAAACAACTGATTTTGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CAA 90 bp | AAAATTAGTCCTAGAGTTACAGCAAGTTATCTCAGCAGCTATAGACAAAACTGGAGATTCCTTCAAAGTTaGGTGAGTTTGCTGGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KISPRVTASYLSSYRQNWRFLQS*VSLLGA Trigger: TGCGCCCAGCAAACTCACCAAACTTTGAAGGAATCT...CCAGTTTTGTCTATAGCTGCTGAGATAACTTGCTGTAACTCTAGGACTAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CAA 90 bp | GCAGGAATTAAAGGCCTTGCCAAGGCTTTTAAGCGATTGATGGAAACAAAACAATCAACAAAAACGTACTaGCTTTTGCATTTCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGIKGLAKAFKRLMETKQSTKTY*LLHFRD Trigger: GTCCCGGAAATGCAAAAGCAAGTACGTTTTTGTTGA...TTGTTTTGTTTCCATCAATCGCTTAAAAGCCTTGGCAAGGCCTTTAATTCCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS-3UTR CAA 90 bp | TTGGAGCAATATTATGTGTCCCAAGTACTTTTTCCCCCTAGCTTCTTGAGTCTGTGCTGCTATTCTTTTTaGTATAGGGAGGAAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LEQYYVSQVLFPPSFLSLCCYSF*YREEGF Trigger: AAAACCTTCCTCCCTATACAAAAAAGAATAGCAGCA...CAGACTCAAGAAGCTAGGGGGAAAAAGTACTTGGGACACATAATATTGCTCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CAA 90 bp | AAAAGTGTTTTAACTTCTCCAAATCCTAGTTTCTTCCGCTGTAACATGAGGATATTTTGGTTTCGTTTTTaGTTCCAGCTCCCTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSVLTSPNPSFFRCNMRIFWFRF*FQLPWR Trigger: CCTCCAAGGGAGCTGGAACAAAAAACGAAACCAAAA...TATCCTCATGTTACAGCGGAAGAAACTAGGATTTGGAGAAGTTAAAACACTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CAA 90 bp | AAAAGTGTTTTAACTTCTCCAAATCCTAGTTTCTTCCGCTGTAACATGAGGATACATGTTTTGCATTGTTaGGCTGAGAACCAACTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KSVLTSPNPSFFRCNMRIHVLHC*AENQLE Trigger: TTCAAGTTGGTTCTCAGCCAAACAATGCAAAACATG...TATCCTCATGTTACAGCGGAAGAAACTAGGATTTGGAGAAGTTAAAACACTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CAA 90 bp | AAAATTAGTCCTAGAGTTACAGCAAGTTATCTCAGCAGCTATAGACAAAACTGGTGTTCACATGCCCTTTaGATCATTCTTTTCTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: KISPRVTASYLSSYRQNWCSHAL*IILFSL Trigger: TAGAGAGAAAAGAATGATCAAAAGGGCATGTGAACA...CCAGTTTTGTCTATAGCTGCTGAGATAACTTGCTGTAACTCTAGGACTAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS-3UTR CAA 90 bp | AAAAGTGTTTTAACTTCTCCAAATCCTAGTTTCTTCCGCTGTAACATGAGGATACAGAGAATTACATTCTaGGAGCAATATTATGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSVLTSPNPSFFRCNMRIQRITF*EQYYVS Trigger: GGACACATAATATTGCTCCAAGAATGTAATTCTCTG...TATCCTCATGTTACAGCGGAAGAAACTAGGATTTGGAGAAGTTAAAACACTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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| CDS CCA 72 bp | AGCAGCTCCTCGACGAACGGCGGCGTCCCCGTCGCCTaGGCAGTGGGTGTGGGAGGTGACAGCCTAGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSSTNGGVPVA*AVGVGGDSLVL Trigger: CAGGACTAGGCTGTCACCTCCCACACCCACTGCCCAGGCGACGGGGACGCCGCCGTTCGTCGAGGAGCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS TCA 72 bp | AGCCTCTGGAGCGGGCCTATACTGCACCGCCGTACGTaGATTTCAGGAGCGCGCAATGCCGCCACCATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SLWSGPILHRRT*ISGARNAATMA Trigger: CGCCATGGTGGCGGCATTGCGCGCTCCTGAAATTCACGTACGGCGGTGCAGTATAGGCCCGCTCCAGAGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409092.1 |
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| CDS CCA 72 bp | GCCGCAGAAAGCCCACAACCAGCGGAACGCAGGCGATaGGGAGAGGAGCGAGCAGGCAGGTTTTGGTTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: AAESPQPAERRR*GEERAGRFWFR Trigger: ACGAAACCAAAACCTGCCTGCTCGCTCCTCTCCCCATCGCCTGCGTTCCGCTGGTTGTGGGCTTTCTGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331426.6 |
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