Pregenerated sensors for RBM12B (Homo sapiens)
Ensembl gene IDs: ENSG00000183808Ensembl transcript IDs: ENST00000399300.6, ENST00000399300.7, ENST00000517700.5, ENST00000517700.6, ENST00000518597.2, ENST00000519109.6, ENST00000520560.6, ENST00000520961.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACTTTCCATGGTGTAAAATACTCCTGCCATGGCCAATTTGTTATTaGCATATCACTAAAGGCAGAGTTGGAGAGAGATGTGCAAAGATG | + |
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Preference number: 1 (lower is better) Translates to: HFPWCKILLPWPICY*HITKGRVGERCAKM Trigger: CATCTTTGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCATGGCAGGAGTATTTTACACCATGGAAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR TCA 90 bp | ATATTTACTGCAAAAACAGAGGCAGCAAGGTCACTACTTAACAGGTaGTATATGGATCAAGAATCACTGCTCTTAACAGTGATCTCAGTA | + |
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Preference number: 1 (lower is better) Translates to: IFTAKTEAARSLLNR*YMDQESLLLTVISV Trigger: TACTGAGATCACTGTTAAGAGCAGTGATTCTTGATCCATATATCACCTGTTAAGTAGTGACCTTGCTGCCTCTGTTTTTGCAGTAAATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000399300.6 |
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| 3UTR-3UTR TCA 90 bp | GGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCTTGAGGATAGGGGGAAGCTGGCTTTCTaGGGGGACAACAGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GIRLENTPPVYLVYLEDRGKLAF*GDNRRG Trigger: TCCCCTCCTGTTGTCCCCTCAGAAAGCCAGCTTCCC...CCTATCCTCAAGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR CCA 90 bp | AAATTGATGAGGTGCTGGGAAGCTGGCTTTCTGAGGGGACAACAGGAGGGGAATAGTCAGTGGTCTGTCTaGGTTAAAATTGGCCCCACG | + |
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Preference number: 2 (lower is better) Translates to: KLMRCWEAGFLRGQQEGNSQWSV*VKIGPT Trigger: CGTGGGGCCAATTTTAACCCAGACAGACCACTGACT...ATTCCCCTCCTGTTGTCCCCTCAGAAAGCCAGCTTCCCAGCACCTCATCAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | GGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCTTGAGGATAGGGAGGCAGCAAAAGCATaGACTGGAGTCAGTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: GIRLENTPPVYLVYLEDREAAKA*TGVSGL Trigger: CAGACCACTGACTCCAGTTCATGCTTTTGCTGCCTC...CCTATCCTCAAGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | AGACAAATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTAGAGGCAGCAAAAGCATaGACTGGAGTCAGTGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: RQMPLGIRLENTPPVYLVEAAKA*TGVSGL Trigger: CAGACCACTGACTCCAGTTCATGCTTTTGCTGCCTC...TACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR CCA 90 bp | AAATTGATGAGGTGCTGGGAAGCTGGCTTTCTGAGGGGACAACAGGAGGGGAATAGCAAAAGCATGAACTaGAGTCAGTGGTCTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KLMRCWEAGFLRGQQEGNSKSMN*SQWSVW Trigger: CCAGACAGACCACTGACTCCAGTTCATGCTTTTGCT...ATTCCCCTCCTGTTGTCCCCTCAGAAAGCCAGCTTCCCAGCACCTCATCAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | GGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCTTGAGGATAGGGGAGTGAGGATTGCTTaGGGCCAGAAATTTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GIRLENTPPVYLVYLEDRGVRIA*GQKFEN Trigger: GTTCTCAAATTTCTGGCCTCAAGCAATCCTCACTCC...CCTATCCTCAAGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR GCA 90 bp | AGACAAATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATTGAAATTGATGAGGTaGTGGGAAGCTGGCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: RQMPLGIRLENTPPVYLVLKLMR*WEAGFL Trigger: CAGAAAGCCAGCTTCCCAGCACCTCATCAATTTCAA...TACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR CCA 90 bp | AAATTGATGAGGTGCTGGGAAGCTGGCTTTCTGAGGGGACAACAGGAGGGGAATATGAACTGGAGTCAGTaGTCTGTCTGGGTTAAAATT | + |
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Preference number: 2 (lower is better) Translates to: KLMRCWEAGFLRGQQEGNMNWSQ*SVWVKI Trigger: AATTTTAACCCAGACAGACCACTGACTCCAGTTCAT...ATTCCCCTCCTGTTGTCCCCTCAGAAAGCCAGCTTCCCAGCACCTCATCAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCATGGAGCAAAAGCATGAACTaGAGTCAGTGGTCTGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RGQQEGNSLICCIYHFPWSKSMN*SQWSVW Trigger: CCAGACAGACCACTGACTCCAGTTCATGCTTTTGCT...CCATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | GGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCTTGAGGATAGGTTTGAGCTCAGTGTTTaGGCATGCTGGTTTTACCTA | + |
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Preference number: 2 (lower is better) Translates to: GIRLENTPPVYLVYLEDRFELSV*ACWFYL Trigger: TAGGTAAAACCAGCATGCTCAAACACTGAGCTCAAA...CCTATCCTCAAGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | AAATTGATGAGGTGCTGGGAAGCTGGCTTTCTGAGGGGACAACAGGAGGGGAATAGTAATGTTAATGTTTaGGCTCAGTGTTTGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: KLMRCWEAGFLRGQQEGNSNVNV*AQCLSM Trigger: CATGCTCAAACACTGAGCTCAAACATTAACATTACT...ATTCCCCTCCTGTTGTCCCCTCAGAAAGCCAGCTTCCCAGCACCTCATCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | AGACAAATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTAAGGAGGGGAATTCCTTaGTTTGCTGCATTTATCACT | + |
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Preference number: 2 (lower is better) Translates to: RQMPLGIRLENTPPVYLVRRGIP*FAAFIT Trigger: AGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCT...TACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | GGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCTTGAGGATAGGAGGAGGGGAATTCCTTaGTTTGCTGCATTTATCACT | + |
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Preference number: 2 (lower is better) Translates to: GIRLENTPPVYLVYLEDRRRGIP*FAAFIT Trigger: AGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCT...CCTATCCTCAAGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR GCA 90 bp | AAATTGATGAGGTGCTGGGAAGCTGGCTTTCTGAGGGGACAACAGGAGGGGAATCAGCCCAGTTTGAAATaGAATTCCACAGTAAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: KLMRCWEAGFLRGQQEGNQPSLK*NSTVSN Trigger: ATTACTTACTGTGGAATTGCATTTCAAACTGGGCTG...ATTCCCCTCCTGTTGTCCCCTCAGAAAGCCAGCTTCCCAGCACCTCATCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR CCA 90 bp | TTTATATTTGAAATTGATGAGGTGCTGGGAAGCTGGCTTTCTGAGGGGACAACAAGTCAGTGGTCTGTCTaGGTTAAAATTGGCCCCACG | + |
|
Preference number: 2 (lower is better) Translates to: FIFEIDEVLGSWLSEGTTSQWSV*VKIGPT Trigger: CGTGGGGCCAATTTTAACCCAGACAGACCACTGACT...TGTTGTCCCCTCAGAAAGCCAGCTTCCCAGCACCTCATCAATTTCAAATATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR GCA 90 bp | AGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCATGGGTAAAGTGCTTACAGTaGCTAGCACATAGTAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: RGQQEGNSLICCIYHFPWVKCLQ*LAHSKC Trigger: GCACTTACTATGTGCTAGGCACTGTAAGCACTTTAC...CCATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGGACAACAGGAGGGGAATTCCTTGATTTGCTGCATTTATCACTTTCCATGGAGAGATGTGCAAAGATaGCTCCCAACTAGAAGATAC | + |
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Preference number: 2 (lower is better) Translates to: RGQQEGNSLICCIYHFPWRDVQR*LPTRRY Trigger: GTATCTTCTAGTTGGGAGCCATCTTTGCACATCTCT...CCATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | GGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCTTGAGGATAGGACGATTTACTACCTATaGCTTCAAGCAAGTTGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: GIRLENTPPVYLVYLEDRTIYYL*LQASCL Trigger: TAAGCAACTTGCTTGAAGTCATAGGTAGTAAATCGT...CCTATCCTCAAGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | AGACAAATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTAACGATTTACTACCTATaGCTTCAAGCAAGTTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: RQMPLGIRLENTPPVYLVTIYYL*LQASCL Trigger: TAAGCAACTTGCTTGAAGTCATAGGTAGTAAATCGT...TACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | GGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATACCTTGAGGATAGGAGTAATGTTAATGTTTaGGCTCAGTGTTTGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: GIRLENTPPVYLVYLEDRSNVNV*AQCLSM Trigger: CATGCTCAAACACTGAGCTCAAACATTAACATTACT...CCTATCCTCAAGGTATACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR GCA 90 bp | AGACAAATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTAGGGAATTCCTTGATTTaGTGCATTTATCACTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RQMPLGIRLENTPPVYLVGNSLI*CIYHFP Trigger: TGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCC...TACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAAATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTATCAATGGGGAAAATCTaGATTACAGAACTGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RQMPLGIRLENTPPVYLVSMGKI*ITELRK Trigger: TTTCCTCAGTTCTGTAATCCAGATTTTCCCCATTGA...TACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR TCA 90 bp | GAATACAAATTGAGTATCCTTTATCTGAAGTGCTTGGGACCAGAAGTATTTAAGTTGAGGCCAGAAATTTaGGAACAGCCTGGGCAACAC | + |
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Preference number: 2 (lower is better) Translates to: EYKLSILYLKCLGPEVFKLRPEI*EQPGQH Trigger: GTGTTGCCCAGGCTGTTCTCAAATTTCTGGCCTCAA...CTTAAATACTTCTGGTCCCAAGCACTTCAGATAAAGGATACTCAATTTGTATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399300.6 |
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| 3UTR-3UTR TCA 90 bp | GGATCAAGAATCACTGCTCTTAACAGTGATCTCAGTAAATTAATAGAAATGCACGGAGTGAGGATTGCTTaGGGCCAGAAATTTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GSRITALNSDLSKLIEMHGVRIA*GQKFEN Trigger: GTTCTCAAATTTCTGGCCTCAAGCAATCCTCACTCC...GTGCATTTCTATTAATTTACTGAGATCACTGTTAAGAGCAGTGATTCTTGATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR GCA 90 bp | TTTATATTTGAAATTGATGAGGTGCTGGGAAGCTGGCTTTCTGAGGGGACAACAAATTCCTTGATTTGCTaGATTTATCACTTTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: FIFEIDEVLGSWLSEGTTNSLIC*IYHFPW Trigger: CCATGGAAAGTGATAAATGCAGCAAATCAAGGAATT...TGTTGTCCCCTCAGAAAGCCAGCTTCCCAGCACCTCATCAATTTCAAATATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR GCA 90 bp | GAATACAAATTGAGTATCCTTTATCTGAAGTGCTTGGGACCAGAAGTATTTAAGTTGAAATTGATGAGGTaGTGGGAAGCTGGCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: EYKLSILYLKCLGPEVFKLKLMR*WEAGFL Trigger: CAGAAAGCCAGCTTCCCAGCACCTCATCAATTTCAA...CTTAAATACTTCTGGTCCCAAGCACTTCAGATAAAGGATACTCAATTTGTATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399300.6 |
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| 3UTR-3UTR TCA 90 bp | GAATACAAATTGAGTATCCTTTATCTGAAGTGCTTGGGACCAGAAGTATTTAAGTCTTGGTTGTGGGATTaGCTTTCTAGACATGATCTA | + |
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Preference number: 2 (lower is better) Translates to: EYKLSILYLKCLGPEVFKSWLWD*LSRHDL Trigger: TAGATCATGTCTAGAAAGTCAATCCCACAACCAAGA...CTTAAATACTTCTGGTCCCAAGCACTTCAGATAAAGGATACTCAATTTGTATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399300.6 |
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| 3UTR-3UTR GCA 90 bp | GGATCAAGAATCACTGCTCTTAACAGTGATCTCAGTAAATTAATAGAAATGCACCAGCCCAGTTTGAAATaGAATTCCACAGTAAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: GSRITALNSDLSKLIEMHQPSLK*NSTVSN Trigger: ATTACTTACTGTGGAATTGCATTTCAAACTGGGCTG...GTGCATTTCTATTAATTTACTGAGATCACTGTTAAGAGCAGTGATTCTTGATCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR CCA 90 bp | GAATACAAATTGAGTATCCTTTATCTGAAGTGCTTGGGACCAGAAGTATTTAAGTTAACAGGTGATATATaGATCAAGAATCACTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: EYKLSILYLKCLGPEVFKLTGDI*IKNHCS Trigger: AGAGCAGTGATTCTTGATCCATATATCACCTGTTAA...CTTAAATACTTCTGGTCCCAAGCACTTCAGATAAAGGATACTCAATTTGTATTC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399300.6 |
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| 3UTR-3UTR CAA 90 bp | AGACAAATGCCACTGGGTATCAGGCTAGAGAATACACCTCCAGTGTACCTGGTAGGGGAATTCCTTGATTaGCTGCATTTATCACTTTCC | + |
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Preference number: 3 (lower is better) Translates to: RQMPLGIRLENTPPVYLVGEFLD*LHLSLS Trigger: GGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCC...TACCAGGTACACTGGAGGTGTATTCTCTAGCCTGATACCCAGTGGCATTTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR TCA 72 bp | TGGTGTAAAATACTCCTGCCATGGCCAATTTGTTATTaGCATATCACTAAAGGCAGAGTTGGAGAGAGATGT | + |
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Preference number: 3 (lower is better) Translates to: WCKILLPWPICY*HITKGRVGERC Trigger: ACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCCATGGCAGGAGTATTTTACACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR CAA 90 bp | GAATACAAATTGAGTATCCTTTATCTGAAGTGCTTGGGACCAGAAGTATTTAAGTGTACCTGGTATACCTaGAGGATAGGAGAGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: EYKLSILYLKCLGPEVFKCTWYT*RIGEEK Trigger: TTTTTCCTCTCCTATCCTCAAGGTATACCAGGTACA...CTTAAATACTTCTGGTCCCAAGCACTTCAGATAAAGGATACTCAATTTGTATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399300.6 |
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| 3UTR GCA 72 bp | GCTGCATTTATCACTTTCCATGGTGTAAAATACTCCTaGCATGGCCAATTTGTTATTGACATATCACTAAAG | + |
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Preference number: 3 (lower is better) Translates to: AAFITFHGVKYS*HGQFVIDISLK Trigger: CTTTAGTGATATGTCAATAACAAATTGGCCATGGCAGGAGTATTTTACACCATGGAAAGTGATAAATGCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR-3UTR CAA 90 bp | GAATACAAATTGAGTATCCTTTATCTGAAGTGCTTGGGACCAGAAGTATTTAAGACAGTTATAGAGTCTTaGCATGGACACAGTTTCGAA | + |
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Preference number: 3 (lower is better) Translates to: EYKLSILYLKCLGPEVFKTVIES*HGHSFE Trigger: TTCGAAACTGTGTCCATGCAAAGACTCTATAACTGT...CTTAAATACTTCTGGTCCCAAGCACTTCAGATAAAGGATACTCAATTTGTATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399300.6 |
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| 3UTR CAA 72 bp | GCTGGCTTTCTGAGGGGACAACAGGAGGGGAATTCCTaGATTTGCTGCATTTATCACTTTCCATGGTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: AGFLRGQQEGNS*ICCIYHFPWCK Trigger: TTTACACCATGGAAAGTGATAAATGCAGCAAATCAAGGAATTCCCCTCCTGTTGTCCCCTCAGAAAGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| 3UTR CAA 72 bp | GGCCAATTTGTTATTGACATATCACTAAAGGCAGAGTaGGAGAGAGATGTGCAAAGATGGCTCCCAACTAGA | + |
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Preference number: 4 (lower is better) Translates to: GQFVIDISLKAE*ERDVQRWLPTR Trigger: TCTAGTTGGGAGCCATCTTTGCACATCTCTCTCCAACTCTGCCTTTAGTGATATGTCAATAACAAATTGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399300.6 ENST00000517700.5 |
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| CDS GCA 90 bp | TCCTCTGAGGAGTGTCGGAAGTCTTCTGGAGGGTGCCTGTCAGGCTaGCGGAAATCCCTCTGGGGATGCTTGAAGTTATCCAGTTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SSEECRKSSGGCLSG*RKSLWGCLKLSSCL Trigger: GAGGCAACTGGATAACTTCAAGCATCCCCAGAGGGATTTCCGGCAGCCTGACAGGCACCCTCCAGAAGACTTCCGACACTCCTCAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS GCA 90 bp | GGGAACCTAAAGTCCTCTGAGGAGTGTCGGAAGTCTTCTGGAGGGTaGCTGTCAGGCTGCCGGAAATCCCTCTGGGGATGCTTGAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: GNLKSSEECRKSSGG*LSGCRKSLWGCLKL Trigger: TAACTTCAAGCATCCCCAGAGGGATTTCCGGCAGCCTGACAGGCACCCTCCAGAAGACTTCCGACACTCCTCAGAGGACTTTAGGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS CCA 90 bp | CAACTTAACTATGAAATCCTTCGAGATCTTCACTCTCAAGATCCCTaGGAAGCGCACATACACCACCACATGGAAGCACTGCTGCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: QLNYEILRDLHSQDP*EAHIHHHMEALLPS Trigger: ACTCGGCAGCAGTGCTTCCATGTGGTGGTGTATGTGCGCTTCCCAGGGATCTTGAGAGTGAAGATCTCGAAGGATTTCATAGTTAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520560.6 |
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| CDS CCA 90 bp | CAACTTAACTATGAAATCCTTCGAGATCTTCACTCTCAAGATCCCTaGGAAGCGCACATACACCACCACATGGAAGCTGACGGGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: QLNYEILRDLHSQDP*EAHIHHHMEADGKG Trigger: TCCTTTCCCGTCAGCTTCCATGTGGTGGTGTATGTGCGCTTCCCAGGGATCTTGAGAGTGAAGATCTCGAAGGATTTCATAGTTAAGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519109.6 |
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| CDS TCA 90 bp | TTCTTCCTTAACAGACTCAATAAAATTAGACAGGCTGTCAACCCCTaGTGTCCCAGATCCTGGACGCCCTCTTCCTACACGATCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: FFLNRLNKIRQAVNP*CPRSWTPSSYTISS Trigger: AGAACTGATCGTGTAGGAAGAGGGCGTCCAGGATCTGGGACATCAGGGGTTGACAGCCTGTCTAATTTTATTGAGTCTGTTAAGGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS CCA 90 bp | AAAGCACCAACTGAGTATATTGGTGGGTCTTTTGAGTCAAATAAATaGGAATGGTCACCTCGCTCACGTGACTGTGAGCGAGCTTGCATT | + |
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Preference number: 5 (lower is better) Translates to: KAPTEYIGGSFESNK*EWSPRSRDCERACI Trigger: AATGCAAGCTCGCTCACAGTCACGTGAGCGAGGTGACCATTCCCATTTATTTGACTCAAAAGACCCACCAATATACTCAGTTGGTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS TCA 90 bp | ACCATGTCCTGTACCATTAGTATGAAACCCAGCATCTTGATTAATTaGAGAGCCATATCCAGAATTACTTGCTTCTTCCTTAACAGACTC | + |
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Preference number: 5 (lower is better) Translates to: TMSCTISMKPSILIN*RAISRITCFFLNRL Trigger: GAGTCTGTTAAGGAAGAAGCAAGTAATTCTGGATATGGCTCTTCAATTAATCAAGATGCTGGGTTTCATACTAATGGTACAGGACATGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS GCA 90 bp | GTCATCATAAAGCAAGTAAATGTCATCCTCAGCAAGAAGAAAGTCTaGAAAGAACTTCTGCACTTCAACTTTTGTAACATCAAATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: VIIKQVNVILSKKKV*KELLHFNFCNIKWK Trigger: TTTCCATTTGATGTTACAAAAGTTGAAGTGCAGAAGTTCTTTGCAGACTTTCTTCTTGCTGAGGATGACATTTACTTGCTTTATGATGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS CCA 90 bp | ACCAATATCCATACTAACACTTCAACAAAAACTACAAATGGCTTCTaGAATACTTACTTTATCCATATTAAAGTCCCAAGACTCCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TNIHTNTSTKTTNGF*NTYFIHIKVPRLPP Trigger: AGGAGGGAGTCTTGGGACTTTAATATGGATAAAGTAAGTATTCCAGAAGCCATTTGTAGTTTTTGTTGAAGTGTTAGTATGGATATTGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000520961.1 |
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| CDS GCA 72 bp | AAGTCCTCTGAGGAGTGTCGGAAGTCTTCTGGAGGGTaGCTGTCAGGCTGCCGGAAATCCCTCTGGGGATGC | + |
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Preference number: 6 (lower is better) Translates to: KSSEECRKSSGG*LSGCRKSLWGC Trigger: GCATCCCCAGAGGGATTTCCGGCAGCCTGACAGGCACCCTCCAGAAGACTTCCGACACTCCTCAGAGGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS GCA 72 bp | GGGTGCCTGTCAGGCTGCCGGAAATCCCTCTGGGGATaGTTGAAGTTATCCAGTTGCCTCAAGTCCTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: GCLSGCRKSLWG*LKLSSCLKSSS Trigger: GCTAGAGGACTTGAGGCAACTGGATAACTTCAAGCATCCCCAGAGGGATTTCCGGCAGCCTGACAGGCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS GCA 72 bp | GAGTGTCGGAAGTCTTCTGGAGGGTGCCTGTCAGGCTaGCGGAAATCCCTCTGGGGATGCTTGAAGTTATCC | + |
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Preference number: 6 (lower is better) Translates to: ECRKSSGGCLSG*RKSLWGCLKLS Trigger: GGATAACTTCAAGCATCCCCAGAGGGATTTCCGGCAGCCTGACAGGCACCCTCCAGAAGACTTCCGACACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS CCA 72 bp | TCTGGAGGGTGCCTGTCAGGCTGCCGGAAATCCCTCTaGGGATGCTTGAAGTTATCCAGTTGCCTCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SGGCLSGCRKSL*GCLKLSSCLKS Trigger: GGACTTGAGGCAACTGGATAACTTCAAGCATCCCCAGAGGGATTTCCGGCAGCCTGACAGGCACCCTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS CAA 72 bp | GGCGGGCTCCTAAAATCCTCACCAGGAGGTCTAAAATaGTCAGGAAGTCTAGGGTCCTCCTCCGGAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GGLLKSSPGGLK*SGSLGSSSGAS Trigger: GGAAGCTCCGGAGGAGGACCCTAGACTTCCTGACAATTTTAGACCTCCTGGTGAGGATTTTAGGAGCCCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS TCA 72 bp | GCCTGTCAGGCTGCCGGAAATCCCTCTGGGGATGCTTaGAGTTATCCAGTTGCCTCAAGTCCTCTAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: ACQAAGNPSGDA*SYPVASSPLAD Trigger: ATCAGCTAGAGGACTTGAGGCAACTGGATAACTTCAAGCATCCCCAGAGGGATTTCCGGCAGCCTGACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS CAA 90 bp | AAATCATCAGGCGGGCTCCTAAAATCCTCACCAGGAGGTCTAAAATaGTCAGGAAGTCTAGGGTCCTCCTCCGGAGCTTCCCTAAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: KSSGGLLKSSPGGLK*SGSLGSSSGASLRS Trigger: AGACCTTAGGGAAGCTCCGGAGGAGGACCCTAGACTTCCTGACAATTTTAGACCTCCTGGTGAGGATTTTAGGAGCCCGCCTGATGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS TCA 72 bp | AACAGACTCAATAAAATTAGACAGGCTGTCAACCCCTaGTGTCCCAGATCCTGGACGCCCTCTTCCTACACG | + |
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Preference number: 6 (lower is better) Translates to: NRLNKIRQAVNP*CPRSWTPSSYT Trigger: CGTGTAGGAAGAGGGCGTCCAGGATCTGGGACATCAGGGGTTGACAGCCTGTCTAATTTTATTGAGTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS CCA 72 bp | TATGAAATCCTTCGAGATCTTCACTCTCAAGATCCCTaGGAAGCGCACATACACCACCACATGGAAGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: YEILRDLHSQDP*EAHIHHHMEAD Trigger: GTCAGCTTCCATGTGGTGGTGTATGTGCGCTTCCCAGGGATCTTGAGAGTGAAGATCTCGAAGGATTTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000519109.6 |
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| CDS CCA 72 bp | TATGAAATCCTTCGAGATCTTCACTCTCAAGATCCCTaGGAAGCGCACATACACCACCACATGGAAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: YEILRDLHSQDP*EAHIHHHMEAL Trigger: CAGTGCTTCCATGTGGTGGTGTATGTGCGCTTCCCAGGGATCTTGAGAGTGAAGATCTCGAAGGATTTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520560.6 |
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| CDS CAA 90 bp | TGCATTTCTGCCTTGCTACTAAGAAAGAGCTCTACAGATGAATCCTaGATAAACCCTCCTGAACGACTTATGGCACGTCTTGCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CISALLLRKSSTDES*INPPERLMARLASS Trigger: TGAAGATGCAAGACGTGCCATAAGTCGTTCAGGAGGGTTTATCAAGGATTCATCTGTAGAGCTCTTTCTTAGTAGCAAGGCAGAAATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS GCA 72 bp | ATCATAGCAACAATGGCTTCCCCTGTAGGTAAGCCTTaGTCATTATACTGTATCGAAACTGAATCAGGTATG | + |
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Preference number: 6 (lower is better) Translates to: IIATMASPVGKP*SLYCIETESGM Trigger: CATACCTGATTCAGTTTCGATACAGTATAATGAGCAAGGCTTACCTACAGGGGAAGCCATTGTTGCTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS TCA 72 bp | TGCTTGAAGTTATCCAGTTGCCTCAAGTCCTCTAGCTaGTGTCTAAAGTTTTCAAAAGCACCAACTGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: CLKLSSCLKSSS*CLKFSKAPTEY Trigger: ATACTCAGTTGGTGCTTTTGAAAACTTTAGACATCAGCTAGAGGACTTGAGGCAACTGGATAACTTCAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS CCA 72 bp | CCGTTTTCGAAAATGTCTATCATTAATTCCTCTTGGTaGAGAATGTTCTTCAGATCTCCTAAGAACGTCACC | + |
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Preference number: 6 (lower is better) Translates to: PFSKMSIINSSW*RMFFRSPKNVT Trigger: GGTGACGTTCTTAGGAGATCTGAAGAACATTCTCCACCAAGAGGAATTAATGATAGACATTTTCGAAAACGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS CCA 72 bp | AGACCGTTTTCGAAAATGTCTATCATTAATTCCTCTTaGTGGAGAATGTTCTTCAGATCTCCTAAGAACGTC | + |
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Preference number: 6 (lower is better) Translates to: RPFSKMSIINSS*WRMFFRSPKNV Trigger: GACGTTCTTAGGAGATCTGAAGAACATTCTCCACCAAGAGGAATTAATGATAGACATTTTCGAAAACGGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS CCA 72 bp | CTCCTGAAGCATCAACACATGAAGCAAATTTTACTATaGCATCACCATTATTTCGGCCATCATGATGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LLKHQHMKQILL*HHHYFGHHDVL Trigger: TAAAACATCATGATGGCCGAAATAATGGTGATGCCATAGTAAAATTTGCTTCATGTGTTGATGCTTCAGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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| CDS TCA 72 bp | TGTACCATTAGTATGAAACCCAGCATCTTGATTAATTaGAGAGCCATATCCAGAATTACTTGCTTCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: CTISMKPSILIN*RAISRITCFFL Trigger: AAGGAAGAAGCAAGTAATTCTGGATATGGCTCTTCAATTAATCAAGATGCTGGGTTTCATACTAATGGTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000399300.7 ENST00000517700.6 ENST00000518597.2 ENST00000519109.6 ENST00000520560.6 |
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