Pregenerated sensors for RBBP9 (Homo sapiens)
Ensembl gene IDs: ENSG00000089050Ensembl transcript IDs: ENST00000337227.9, ENST00000491835.1, ENST00000493184.5
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGTCAGTAAGGTAACCAATAGCCACCAGTGGCTGTTGAGCACTTaGAATATGGCTAGTTTGACTGAACTGAATTTTCAATTTTACAGC | + |
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Preference number: 1 (lower is better) Translates to: LVSKVTNSHQWLLST*NMASLTELNFQFYS Trigger: GCTGTAAAATTGAAAATTCAGTTCAGTCAAACTAGCCATATTTCAAGTGCTCAACAGCCACTGGTGGCTATTGGTTACCTTACTGACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAGGGCTCAAGCAATCCTaGCTCAGCCTCCCAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: PECIEAPVYSMMTTKNQTGLKQS*LSLPRS Trigger: GCTTCTTGGGAGGCTGAGGCAGGATTGCTTGAGCCC...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACACTTGCTGTGTTGCCCTaGCTGGCCTCAAACACCTGG | + |
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Preference number: 2 (lower is better) Translates to: PECIEAPVYSMMTTKNQTLAVLP*LASNTW Trigger: CCAGGTGTTTGAGGCCAGCCAGGGCAACACAGCAAG...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACACAGGATGGAGTACAGTaGCGCGATCATAGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: PECIEAPVYSMMTTKNQTQDGVQ*RDHSSL Trigger: CAGTGAGCTATGATCGCGCCACTGTACTCCATCCTG...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACATGGCTGTTGAGCACTTaGAATATGGCTAGTTTGACT | + |
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Preference number: 2 (lower is better) Translates to: PECIEAPVYSMMTTKNQTWLLST*NMASLT Trigger: AGTCAAACTAGCCATATTTCAAGTGCTCAACAGCCA...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAAATTTTACTCAGGAGTaGGAATCAAGAAACCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PECIEAPVYSMMTTKNQTNFTQE*ESRNLG Trigger: ACCCAGGTTTCTTGATTCCCACTCCTGAGTAAAATT...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR TCA 72 bp | GCCCCATTTCCACATGGCAACAATTTAGACAGGCCATaGGCTCTCCACATGGCTCTGATCCCACCACTCTTG | + |
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Preference number: 3 (lower is better) Translates to: APFPHGNNLDRP*ALHMALIPPLL Trigger: CAAGAGTGGTGGGATCAGAGCCATGTGGAGAGCTCATGGCCTGTCTAAATTGTTGCCATGTGGAAATGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR TCA 72 bp | GTGGCACATGCCTTTAGTTCACACTACTTGGGAGGCTaGGATGAGAATCACTTGAACCCGGGAGGTGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: VAHAFSSHYLGG*DENHLNPGGAG Trigger: ACCTGCACCTCCCGGGTTCAAGTGATTCTCATCTCAGCCTCCCAAGTAGTGTGAACTAAAGGCATGTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR-3UTR CAA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAATGTCTGGGGCCAGCTaGAAACAGCAGCTAGTATTT | + |
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Preference number: 3 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVMSGAS*KQQLVF Trigger: AAATACTAGCTGCTGTTTCAAGCTGGCCCCAGACAT...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR CCA 72 bp | ATCAGAAAATTGGCAACACTCTGCCCCATTTCCACATaGCAACAATTTAGACAGGCCATGAGCTCTCCACAT | + |
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Preference number: 3 (lower is better) Translates to: IRKLATLCPIST*QQFRQAMSSPH Trigger: ATGTGGAGAGCTCATGGCCTGTCTAAATTGTTGCCATGTGGAAATGGGGCAGAGTGTTGCCAATTTTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR-3UTR CAA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACATGTCCTAGACCAATGTaGTCCAATAGAGCTTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: PECIEAPVYSMMTTKNQTCPRPM*SNRAFY Trigger: ATAGAAAGCTCTATTGGACAACATTGGTCTAGGACA...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR TCA 72 bp | AAGGTAACCAATAGCCACCAGTGGCTGTTGAGCACTTaGAATATGGCTAGTTTGACTGAACTGAATTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: KVTNSHQWLLST*NMASLTELNFQ Trigger: TTGAAAATTCAGTTCAGTCAAACTAGCCATATTTCAAGTGCTCAACAGCCACTGGTGGCTATTGGTTACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| 3UTR CCA 72 bp | CTTGTGTTTGTTTTTCAGGCACTTACGGAACTTAACTaGATGTTCTATGTGTCTAGTAATCAGCTGATAGTA | + |
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Preference number: 3 (lower is better) Translates to: LVFVFQALTELN*MFYVSSNQLIV Trigger: TACTATCAGCTGATTACTAGACACATAGAACATCCAGTTAAGTTCCGTAAGTGCCTGAAAAACAAACACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAGCAGCTCTGTCTCCATaGAGGGCAGCCAGATGCTCT | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVAALSP*RAARCS Trigger: AGAGCATCTGGCTGCCCTTCATGGAGACAGAGCTGC...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAAAGGGCAGTTGGCCTTaGTCTTCTCCCACTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVKGSWP*SSPTAR Trigger: CCTGGCAGTGGGAGAAGATCAAGGCCAACTGCCCTT...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAGGGGTCTTGCTGTGTTaGCCTGGCTGGCCTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVGVLLC*PGWPQT Trigger: TGTTTGAGGCCAGCCAGGGCAACACAGCAAGACCCC...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACACAGCCATACCAGCCGTaGGTGGTCACATCCCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTQPYQP*VVTSPP Trigger: AGGCGGGGATGTGACCACCCACGGCTGGTATGGCTG...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAGCGATCATAGCTCACTaGAGGCTCAAACTCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVAIIAH*RLKLLG Trigger: GCCCAGGAGTTTGAGCCTTCAGTGAGCTATGATCGC...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAACCTCATGGCCGCGATaGCCCCAGAACTGTGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTTSWPR*PQNCGQ Trigger: TTGGCCACAGTTCTGGGGCCATCGCGGCCATGAGGT...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTATTTCTGCATACCTCATaGCCGCGATGGCCCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVFLHTS*PRWPQN Trigger: GTTCTGGGGCCATCGCGGCCATGAGGTATGCAGAAA...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAAGGAGAAGCCATGAGTaGAGCGAGGCCAGAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTRRSHE*SEARVP Trigger: GGGAACTCTGGCCTCGCTGCACTCATGGCTTCTCCT...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTACCCGGGAACAATCACTaGCTTGCTAGGAGAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVPGNNH*LARRSH Trigger: ATGGCTTCTCCTAGCAAGGCAGTGATTGTTCCCGGG...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTACAGGATGGAGTACAGTaGCGCGATCATAGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVQDGVQ*RDHSSL Trigger: CAGTGAGCTATGATCGCGCCACTGTACTCCATCCTG...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAAATTTAGACAGGCCATaGGCTCTCCACATGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVNLDRP*ALHMAL Trigger: CAGAGCCATGTGGAGAGCTCATGGCCTGTCTAAATT...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCACATACCAGCCGTGGGTaGTCACATCCCCGCCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDAHTSRG*SHPRLR Trigger: ACGGAGGCGGGGATGTGACCACCCACGGCTGGTATG...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCAACTGCCAGGGGCGGGTaGAGTATCCACTTGCACGCT | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDATARGG*SIHLHA Trigger: AGCGTGCAAGTGGATACTTCACCCGCCCCTGGCAGT...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAGTCTTCTCATCACAGTaGAGCTCTGTCTCCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVVFSSQ*SSVSMK Trigger: CTTCATGGAGACAGAGCTGCACTGTGATGAGAAGAC...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAGGTGAAGTATCCACTTaGACGCTCATTTTCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVGEVST*TLIFIP Trigger: GGGGATGAAAATGAGCGTGCAAGTGGATACTTCACC...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTACTCTCGTGCTGTAATTaGGTCGGGCATGTTTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVLSCCN*VGHVFS Trigger: GCTAAAAACATGCCCGACCCAATTACAGCACGAGAG...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAGCCACCAGTGGCTGTTaGGCACTTGAAATATGGCTA | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTATSGC*ALEIWL Trigger: TAGCCATATTTCAAGTGCTCAACAGCCACTGGTGGC...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCAGGGCTCAAGCAATCCTaGCTCAGCCTCCCAAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDAGLKQS*LSLPRS Trigger: GCTTCTTGGGAGGCTGAGGCAGGATTGCTTGAGCCC...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAGGGAATCAAGAAACCTaGGTTCTGTTTCTGACTCAC | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVGNQET*VLFLTH Trigger: GTGAGTCAGAAACAGAACCCAGGTTTCTTGATTCCC...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAATGGCCCCAGAACTGTaGCCAATGATGATAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTMAPEL*PMMIVF Trigger: GAAGACTATCATCATTGGCCACAGTTCTGGGGCCAT...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCAGAGATGAGAATCACTTaGACCCGGGAGGTGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDAEMRIT*TREVQV Trigger: AACCTGCACCTCCCGGGTTCAAGTGATTCTCATCTC...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCATTGATCTTCTCCCACTaGCAGGGGCGGGTGAAGTAT | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDALIFSH*QGRVKY Trigger: ATACTTCACCCGCCCCTGGCAGTGGGAGAAGATCAA...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAAAATTGGCAACACTCTaGCCCATTTCCACATGGCAA | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTKLATL*PISTWQ Trigger: TTGCCATGTGGAAATGGGGCAGAGTGTTGCCAATTT...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACATCTGAGTTTAATGTCTaGGGCCAGCTTGAAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTSEFNV*GQLETA Trigger: TGCTGTTTCAAGCTGGCCCCAGACATTAAACTCAGA...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCAAGGTGCAGGTTAGAGTaGGCTGAGATTTGTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDARCRLE*AEICAT Trigger: AGTGGCACAAATCTCAGCTCACTCTAACCTGCACCT...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAAACAGAAATCAGAAATaGCAGTCCATGGCTCTATGG | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTNRNQK*QSMALW Trigger: CCATAGAGCCATGGACTGTCATTTCTGATTTCTGTT...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTACCTAATACTTACAGTTaGTTTCCATTCAGTATTCGG | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVPNTYS*FPFSIR Trigger: CCGAATACTGAATGGAAATCAACTGTAAGTATTAGG...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAAGGAAATTGTATTTCTaGAGCAAACTTAGGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVRKLYF*SKLRLC Trigger: GCAAAGCCTAAGTTTGCTGCAGAAATACAATTTCCT...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCACTGGCCTCAAACACCTaGCCTCAAGCAATACAACCA | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDALASNT*PQAIQP Trigger: TGGTTGTATTGCTTGAGGCCAGGTGTTTGAGGCCAG...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACATTAGTTCACACTACTTaGGAGGCTGAGATGAGAATC | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTLVHTT*EAEMRI Trigger: GATTCTCATCTCAGCCTCCCAAGTAGTGTGAACTAA...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAGCTAGCTGTGGTTACTaGTTACTATATTTGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTASCGY*LLYLAA Trigger: TGCTGCCAAATATAGTAACCAGTAACCACAGCTAGC...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAGGAAATAGCCTATATTaGCTGGTCAGTAAGGTAACC | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTGNSLY*LVSKVT Trigger: GGTTACCTTACTGACCAGCCAATATAGGCTATTTCC...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCACCTGGGTTCTGTTTCTaGCTCACTTCGGATAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDAPGFCF*LTSDRE Trigger: TTCTCTATCCGAAGTGAGTCAGAAACAGAACCCAGG...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCATACTCGATGTGTTTCTaGATACCTCATGGCCGCGAT | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDAYSMCF*IPHGRD Trigger: ATCGCGGCCATGAGGTATGCAGAAACACATCGAGTA...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAAGGTGTGCACCACCATaGCTAGCTAATGTTTTAATA | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTRCAPP*LANVLI Trigger: TATTAAAACATTAGCTAGGCATGGTGGTGCACACCT...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCATGCCCCATTTCCACATaGCAACAATTTAGACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDACPIST*QQFRQA Trigger: GGCCTGTCTAAATTGTTGCCATGTGGAAATGGGGCA...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTAACTGGTTACTATATTTaGCAGCAAAGTTCAACAATC | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVTGYYI*QQSSTI Trigger: GATTGTTGAACTTTGCTGCCAAATATAGTAACCAGT...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACACTCATTATTGGATGGTaGGTGAGGGGAAAATACAAA | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTLIIGW*VRGKYK Trigger: TTTGTATTTTCCCCTCACCCACCATCCAATAATGAG...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAACCCCTGATCTTAGTTaGGTGATTTATAGACCTATG | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTTPDLS*VIYRPM Trigger: CATAGGTCTATAAATCACCCAACTAAGATCAGGGGT...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTACAGTCCATGGCTCTATaGTTTTTAATGAATAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVQSMAL*FLMNSL Trigger: CAAACTATTCATTAAAAACCATAGAGCCATGGACTG...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACACAGTATTCGGTATTTTaGTCACCTGAGAATAGATAC | + |
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Preference number: 4 (lower is better) Translates to: PECIEAPVYSMMTTKNQTQYSVF*SPENRY Trigger: GTATCTATTCTCAGGTGAGCAAAATACCGAATACTG...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCAAGTGGCCACAGTCAGTaGATTTGTGCAATTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDASGHSQ*ICAIWF Trigger: AAACCAAATTGCACAAATTCACTGACTGTGGCCACT...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR TCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCATGGCTGTTGAGCACTTaGAATATGGCTAGTTTGACT | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDAWLLST*NMASLT Trigger: AGTCAAACTAGCCATATTTCAAGTGCTCAACAGCCA...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCAGCTATTACTCATTATTaGATGGTGGGTGAGGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDAAITHY*MVGEGK Trigger: TTTCCCCTCACCCACCATCCAATAATGAGTAATAGC...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCATTTTTAGCCAAACACTaGAAACCAGGTATCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDAFLAKH*KPGIFS Trigger: GGAGAAGATACCTGGTTTCCAGTGTTTGGCTAAAAA...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCAAATTTTACTCAGGAGTaGGAATCAAGAAACCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDANFTQE*ESRNLG Trigger: ACCCAGGTTTCTTGATTCCCACTCCTGAGTAAAATT...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCATTACTCATTATTGGATaGTGGGTGAGGGGAAAATAC | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDALLIIG*WVRGKY Trigger: GTATTTTCCCCTCACCCACCATCCAATAATGAGTAA...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCACTTACGGAACTTAACTaGATGTTCTATGTGTCTAGT | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDALTELN*MFYVSS Trigger: ACTAGACACATAGAACATCCAGTTAAGTTCCGTAAG...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR GCA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCAAAATCATACAGTCTATaGTGGTACTTTCAGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: VSSNQLIVDIILLLYWDAKSYSL*WYFQQR Trigger: TCTTTGCTGAAAGTACCAGCATAGACTGTATGATTT...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS GCA 90 bp | GCCGTGGGTGGTCACATCCCCGCCTCCGTTCCCGGGAACAATCACTaGCTTGCTAGGAGAAGCCATGAGTGCAGCGAGGCCAGAGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: AVGGHIPASVPGNNH*LARRSHECSEARVP Trigger: GGGAACTCTGGCCTCGCTGCACTCATGGCTTCTCCTAGCAAGGCAGTGATTGTTCCCGGGAACGGAGGCGGGGATGTGACCACCCACGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS CCA 90 bp | GTAACTTCTCCAGCTCCTTTTTCACCCAGCCATACCAGCCGTGGGTaGTCACATCCCCGCCTCCGTTCCCGGGAACAATCACTGCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: VTSPAPFSPSHTSRG*SHPRLRSREQSLPC Trigger: GCAAGGCAGTGATTGTTCCCGGGAACGGAGGCGGGGATGTGACCACCCACGGCTGGTATGGCTGGGTGAAAAAGGAGCTGGAGAAGTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000491835.1 ENST00000493184.5 |
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| CDS CCA 90 bp | TGCTGTAACTTCTCCAGCTCCTTTTTCACCCAGCCATACCAGCCGTaGGTGGTCACATCCCCGCCTCCGTTCCCGGGAACAATCACTGCC | + |
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Preference number: 5 (lower is better) Translates to: CCNFSSSFFTQPYQP*VVTSPPPFPGTITA Trigger: GGCAGTGATTGTTCCCGGGAACGGAGGCGGGGATGTGACCACCCACGGCTGGTATGGCTGGGTGAAAAAGGAGCTGGAGAAGTTACAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000491835.1 ENST00000493184.5 |
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| CDS GCA 90 bp | ATGGCCCCAGAACTGTGGCCAATGATGATAGTCTTCTCATCACAGTaGAGCTCTGTCTCCATGAAGGGCAGCCAGATGCTCTCTCGTGCT | + |
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Preference number: 5 (lower is better) Translates to: MAPELWPMMIVFSSQ*SSVSMKGSQMLSRA Trigger: AGCACGAGAGAGCATCTGGCTGCCCTTCATGGAGACAGAGCTGCACTGTGATGAGAAGACTATCATCATTGGCCACAGTTCTGGGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337227.9 ENST00000491835.1 ENST00000493184.5 |
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| CDS CCA 90 bp | CGATGTGTTTCTGCATACCTCATGGCCGCGATGGCCCCAGAACTGTaGCCAATGATGATAGTCTTCTCATCACAGTGCAGCTCTGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RCVSAYLMAAMAPEL*PMMIVFSSQCSSVS Trigger: GGAGACAGAGCTGCACTGTGATGAGAAGACTATCATCATTGGCCACAGTTCTGGGGCCATCGCGGCCATGAGGTATGCAGAAACACATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000337227.9 ENST00000491835.1 |
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| CDS-3UTR CAA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACACCTATCGGCCACTTCTaGTTGTTCCTTCCAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PECIEAPVYSMMTTKNQTPIGHF*LFLPGK Trigger: CTTCCCTGGAAGGAACAACAAGAAGTGGCCGATAGG...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CAA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTACCACAGTCAGTGAATTaGTGCAATTTGGTTTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVPQSVN*CNLVSN Trigger: GTTGGAAACCAAATTGCACAAATTCACTGACTGTGG...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CAA 90 bp | CCAGAGTGTATAGAGGCCCCTGTATATTCAATGATGACCACAAAGAATCAAACAATGTCTGGGGCCAGCTaGAAACAGCAGCTAGTATTT | + |
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Preference number: 5 (lower is better) Translates to: PECIEAPVYSMMTTKNQTMSGAS*KQQLVF Trigger: AAATACTAGCTGCTGTTTCAAGCTGGCCCCAGACAT...TGTTTGATTCTTTGTGGTCATCATTGAATATACAGGGGCCTCTATACACTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CAA 90 bp | CATGGCTCTGATCCCACCACTCTTGTCTCAAACAAATCTAGTCAGTTGTACGTATGTCCTAGACCAATGTaGTCCAATAGAGCTTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: HGSDPTTLVSNKSSQLYVCPRPM*SNRAFY Trigger: ATAGAAAGCTCTATTGGACAACATTGGTCTAGGACA...TACGTACAACTGACTAGATTTGTTTGAGACAAGAGTGGTGGGATCAGAGCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CAA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCAATCGGCCACTTCTTGTaGTTCCTTCCAGGGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: VSSNQLIVDIILLLYWDAIGHFL*FLPGKE Trigger: TTCCTTCCCTGGAAGGAACAACAAGAAGTGGCCGAT...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS-3UTR CAA 90 bp | GTGTCTAGTAATCAGCTGATAGTAGATATTATTCTACTCCTATATTGGGATGCAGTGAATTTGTGCAATTaGGTTTCCAACCTATCGGCC | + |
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Preference number: 5 (lower is better) Translates to: VSSNQLIVDIILLLYWDAVNLCN*VSNLSA Trigger: GGCCGATAGGTTGGAAACCAAATTGCACAAATTCAC...TGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGCTGATTACTAGACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS CAA 90 bp | TGGGTGGTCACATCCCCGCCTCCGTTCCCGGGAACAATCACTGCCTaGCTAGGAGAAGCCATGAGTGCAGCGAGGCCAGAGTTCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: WVVTSPPPFPGTITA*LGEAMSAARPEFPS Trigger: GCTGGGGAACTCTGGCCTCGCTGCACTCATGGCTTCTCCTAGCAAGGCAGTGATTGTTCCCGGGAACGGAGGCGGGGATGTGACCACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS CCA 72 bp | CCAGCTCCTTTTTCACCCAGCCATACCAGCCGTGGGTaGTCACATCCCCGCCTCCGTTCCCGGGAACAATCA | + |
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Preference number: 6 (lower is better) Translates to: PAPFSPSHTSRG*SHPRLRSREQS Trigger: TGATTGTTCCCGGGAACGGAGGCGGGGATGTGACCACCCACGGCTGGTATGGCTGGGTGAAAAAGGAGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000337227.9 ENST00000491835.1 ENST00000493184.5 |
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| CDS CCA 72 bp | TTCTCCAGCTCCTTTTTCACCCAGCCATACCAGCCGTaGGTGGTCACATCCCCGCCTCCGTTCCCGGGAACA | + |
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Preference number: 6 (lower is better) Translates to: FSSSFFTQPYQP*VVTSPPPFPGT Trigger: TGTTCCCGGGAACGGAGGCGGGGATGTGACCACCCACGGCTGGTATGGCTGGGTGAAAAAGGAGCTGGAGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000337227.9 ENST00000491835.1 ENST00000493184.5 |
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| CDS CAA 72 bp | ACATCCCCGCCTCCGTTCCCGGGAACAATCACTGCCTaGCTAGGAGAAGCCATGAGTGCAGCGAGGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TSPPPFPGTITA*LGEAMSAARPE Trigger: CTCTGGCCTCGCTGCACTCATGGCTTCTCCTAGCAAGGCAGTGATTGTTCCCGGGAACGGAGGCGGGGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS CCA 72 bp | TCTGCATACCTCATGGCCGCGATGGCCCCAGAACTGTaGCCAATGATGATAGTCTTCTCATCACAGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SAYLMAAMAPEL*PMMIVFSSQCS Trigger: GCTGCACTGTGATGAGAAGACTATCATCATTGGCCACAGTTCTGGGGCCATCGCGGCCATGAGGTATGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000337227.9 ENST00000491835.1 |
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| CDS GCA 72 bp | GAACTGTGGCCAATGATGATAGTCTTCTCATCACAGTaGAGCTCTGTCTCCATGAAGGGCAGCCAGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: ELWPMMIVFSSQ*SSVSMKGSQML Trigger: GAGCATCTGGCTGCCCTTCATGGAGACAGAGCTGCACTGTGATGAGAAGACTATCATCATTGGCCACAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000337227.9 ENST00000491835.1 ENST00000493184.5 |
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| CDS CAA 72 bp | TTTGTGCAATTTGGTTTCCAACCTATCGGCCACTTCTaGTTGTTCCTTCCAGGGAAGGAACGGGTCGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: FVQFGFQPIGHF*LFLPGKERVVS Trigger: ACTGACGACCCGTTCCTTCCCTGGAAGGAACAACAAGAAGTGGCCGATAGGTTGGAAACCAAATTGCACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000337227.9 ENST00000491835.1 ENST00000493184.5 |
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| CDS CAA 90 bp | AGTGAATTTGTGCAATTTGGTTTCCAACCTATCGGCCACTTCTTGTaGTTCCTTCCAGGGAAGGAACGGGTCGTCAGTAGAGCCAAACTG | + |
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Preference number: 6 (lower is better) Translates to: SEFVQFGFQPIGHFL*FLPGKERVVSRAKL Trigger: CAGTTTGGCTCTACTGACGACCCGTTCCTTCCCTGGAAGGAACAACAAGAAGTGGCCGATAGGTTGGAAACCAAATTGCACAAATTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000337227.9 ENST00000491835.1 ENST00000493184.5 |
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| CDS CAA 90 bp | GTCAGTGAATTTGTGCAATTTGGTTTCCAACCTATCGGCCACTTCTaGTTGTTCCTTCCAGGGAAGGAACGGGTCGTCAGTAGAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VSEFVQFGFQPIGHF*LFLPGKERVVSRAK Trigger: TTTGGCTCTACTGACGACCCGTTCCTTCCCTGGAAGGAACAACAAGAAGTGGCCGATAGGTTGGAAACCAAATTGCACAAATTCACTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000337227.9 ENST00000491835.1 ENST00000493184.5 |
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| CDS CCA 72 bp | GCTGTAATTGGGTCGGGCATGTTTTTAGCCAAACACTaGAAACCAGGTATCTTCTCCAGCTCCTTTTTCACC | + |
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Preference number: 6 (lower is better) Translates to: AVIGSGMFLAKH*KPGIFSSSFFT Trigger: GGTGAAAAAGGAGCTGGAGAAGATACCTGGTTTCCAGTGTTTGGCTAAAAACATGCCCGACCCAATTACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000337227.9 |
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| CDS GCA 72 bp | GCTGATAGTAGATATTATTCTACTCCTATATTGGGATaGAAAATAGCAGAAATCATACAGTCTATGCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: ADSRYYSTPILG*KIAEIIQSMLV Trigger: TACCAGCATAGACTGTATGATTTCTGCTATTTTGCATCCCAATATAGGAGTAGAATAATATCTACTATCAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337227.9 ENST00000491835.1 ENST00000493184.5 |
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