Pregenerated sensors for RBAKDN (Homo sapiens)
Ensembl gene IDs: ENSG00000273313Ensembl transcript IDs: ENST00000498308.1
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGAGTGGACAGGGAAAGCCCCATGTTCCCCGGAGCCTGTCGCCGTaGCCTGCAGCCCTGGACGCCTCTCACGGAACCGCAGGTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GSGQGKPHVPRSLSP*PAALDASHGTAGLP Trigger: AGGAAGACCTGCGGTTCCGTGAGAGGCGTCCAGGGCTGCAGGCCACGGCGACAGGCTCCGGGGAACATGGGGCTTTCCCTGTCCACTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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| CDS CCA 90 bp | CCTGGACGCCTCTCACGGAACCGCAGGTCTTCCTCCCCGGCTTTCTaGTCGCGTGGCCACCACAGCCCCATCAATACAGCCAGAGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: PGRLSRNRRSSSPAF*SRGHHSPINTARAR Trigger: CCGGGCTCTGGCTGTATTGATGGGGCTGTGGTGGCCACGCGACCAGAAAGCCGGGGAGGAAGACCTGCGGTTCCGTGAGAGGCGTCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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| CDS GCA 72 bp | AGCAGCAGCAGCAGCAACAGCGGGGGCCACATGGCCTaGGGGCAGGGCGGCAGTCACCGGTCTCCGGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSSSSNSGGHMA*GQGGSHRSPAP Trigger: GGGAGCCGGAGACCGGTGACTGCCGCCCTGCCCGCAGGCCATGTGGCCCCCGCTGTTGCTGCTGCTGCTGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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| CDS CCA 72 bp | GGAGCAGCAGCAGCAGCAGCAACAGCGGGGGCCACATaGCCTGCGGGCAGGGCGGCAGTCACCGGTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: GAAAAAATAGAT*PAGRAAVTGLR Trigger: CCGGAGACCGGTGACTGCCGCCCTGCCCGCAGGCCATGTGGCCCCCGCTGTTGCTGCTGCTGCTGCTGCTCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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| CDS CAA 90 bp | GCCTGCGGGCAGGGCGGCAGTCACCGGTCTCCGGCTCCCCAGGGATaGTTAGATCCGGACAGTTCTGCCCCAGAGCTGCCCTGGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: ACGQGGSHRSPAPQG*LDPDSSAPELPWSS Trigger: CGAGCTCCAGGGCAGCTCTGGGGCAGAACTGTCCGGATCTAACAATCCCTGGGGAGCCGGAGACCGGTGACTGCCGCCCTGCCCGCAGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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| CDS CCA 72 bp | ATGTTCCCCGGAGCCTGTCGCCGTGGCCTGCAGCCCTaGACGCCTCTCACGGAACCGCAGGTCTTCCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: MFPGACRRGLQP*TPLTEPQVFLP Trigger: GGGGAGGAAGACCTGCGGTTCCGTGAGAGGCGTCCAGGGCTGCAGGCCACGGCGACAGGCTCCGGGGAACAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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| CDS GCA 72 bp | AAAGCCCCATGTTCCCCGGAGCCTGTCGCCGTGGCCTaGAGCCCTGGACGCCTCTCACGGAACCGCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: KAPCSPEPVAVA*SPGRLSRNRRS Trigger: AGACCTGCGGTTCCGTGAGAGGCGTCCAGGGCTGCAGGCCACGGCGACAGGCTCCGGGGAACATGGGGCTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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| CDS CAA 72 bp | CAGGGCGGCAGTCACCGGTCTCCGGCTCCCCAGGGATaGTTAGATCCGGACAGTTCTGCCCCAGAGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: QGGSHRSPAPQG*LDPDSSAPELP Trigger: GGGCAGCTCTGGGGCAGAACTGTCCGGATCTAACAATCCCTGGGGAGCCGGAGACCGGTGACTGCCGCCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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| CDS CCA 72 bp | GAACCGCAGGTCTTCCTCCCCGGCTTTCTGGTCGCGTaGCCACCACAGCCCCATCAATACAGCCAGAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: EPQVFLPGFLVA*PPQPHQYSQSP Trigger: CGGGCTCTGGCTGTATTGATGGGGCTGTGGTGGCCACGCGACCAGAAAGCCGGGGAGGAAGACCTGCGGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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| CDS CCA 72 bp | CTCTCACGGAACCGCAGGTCTTCCTCCCCGGCTTTCTaGTCGCGTGGCCACCACAGCCCCATCAATACAGCC | + |
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Preference number: 6 (lower is better) Translates to: LSRNRRSSSPAF*SRGHHSPINTA Trigger: GGCTGTATTGATGGGGCTGTGGTGGCCACGCGACCAGAAAGCCGGGGAGGAAGACCTGCGGTTCCGTGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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| CDS CAA 72 bp | TCTGGAGAGGGCACACGGCCGTCCCCTGCCAATGCGTaGAGGCCCACACTCCTTGGGAGTGGACAGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: SGEGTRPSPANA*RPTLLGSGQGK Trigger: CTTTCCCTGTCCACTCCCAAGGAGTGTGGGCCTCAACGCATTGGCAGGGGACGGCCGTGTGCCCTCTCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498308.1 |
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