RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASSF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000107551

Ensembl transcript IDs: ENST00000340258.10, ENST00000427758.5, ENST00000428466.1, ENST00000462822.1, ENST00000465735.5, ENST00000471808.1, ENST00000471941.5, ENST00000472561.5, ENST00000483709.6, ENST00000484477.2, ENST00000489171.5, ENST00000493490.1

Found 473 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGATGCGCTGGGCCTCACCGGGGGCGCGGCACTTGGGCCTCCTCTaGCTCATGCAACTGGCGTCGCTCTTGGTCCGCATCAGCTGGGGG +
Preference number: 1 (lower is better)
Translates to: RMRWASPGARHLGLL*LMQLASLLVRISWG
Trigger: CCCCCAGCTGATGCGGACCAAGAGCGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR CCA 90 bp ACCGGTGTCGCCGGATGCGCTGGGCCTCACCGGGGGCGCGGCACTTaGGCCTCCTCTGGCTCATGCAACTGGCGTCGCTCTTGGTCCGCA +
Preference number: 1 (lower is better)
Translates to: TGVAGCAGPHRGRGT*ASSGSCNWRRSWSA
Trigger: TGCGGACCAAGAGCGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR GCA 90 bp GGCATCCATGAGGTGGAGGGGAGGTGCACCTGCTCCCGGTCATCCTaGATCTGCAGCCGGATGGGCCGCCTCAGCCCCCAGGCAATGTTG +
Preference number: 1 (lower is better)
Translates to: GIHEVEGRCTCSRSS*ICSRMGRLSPQAML
Trigger: CAACATTGCCTGGGGGCTGAGGCGGCCCATCCGGCTGCAGATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTCATGGATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR CCA 90 bp GGAGAGGGAGGGCTGGCGCCTCCCTGTGCTAGGCTGGGAGCCCTTTaGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTG +
Preference number: 1 (lower is better)
Translates to: GEGGLAPPCARLGAL*ESVELLETSTDRAL
Trigger: CAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCCAAAGGGCTCCCAGCCTAGCACAGGGAGGCGCCAGCCCTCCCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR TCA 90 bp GACACACAGGCACTCGATTCGTCAGGCGGTGGCCATCAGTCAATGTaGCCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCAC +
Preference number: 1 (lower is better)
Translates to: DTQALDSSGGGHQSM*PAGASNQGSVYTCH
Trigger: GTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGCCTGTGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR GCA 90 bp ATGTGCAAGCAGATGAAGCCTAAGCCGCAGGGGCTGGGCCAGCACTaGTCTCCAGTGCAGGAGAGGCATGGTGTGGACAGGGCTGGCCAC +
Preference number: 1 (lower is better)
Translates to: MCKQMKPKPQGLGQH*SPVQERHGVDRAGH
Trigger: GTGGCCAGCCCTGTCCACACCATGCCTCTCCTGCACTGGAGAGCAGTGCTGGCCCAGCCCCTGCGGCTTAGGCTTCATCTGCTTGCACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR GCA 90 bp CACGGGACAGTGGTGATGGGGCTGAGCACTGCCTTCCAGAGCTGCTaGTGGGCATTGAGCGGGCAGCACCCTCTCAATGCCATGTGGACC +
Preference number: 1 (lower is better)
Translates to: HGTVVMGLSTAFQSC*WALSGQHPLNAMWT
Trigger: GGTCCACATGGCATTGAGAGGGTGCTGCCCGCTCAATGCCCAGCAGCAGCTCTGGAAGGCAGTGCTCAGCCCCATCACCACTGTCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 90 bp CCAGCACTGCTCTCCAGTGCAGGAGAGGCATGGTGTGGACAGGGCTaGCCACACAGATCTGACCCAGCAAGTTCCTGGCCCCTCAGGCCT +
Preference number: 1 (lower is better)
Translates to: PALLSSAGEAWCGQG*PHRSDPASSWPLRP
Trigger: AGGCCTGAGGGGCCAGGAACTTGCTGGGTCAGATCTGTGTGGCCAGCCCTGTCCACACCATGCCTCTCCTGCACTGGAGAGCAGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 90 bp GCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTaGCGCCACATGCACTTCTTAGCCAACTCTGCCTTGGCCTCCACC +
Preference number: 1 (lower is better)
Translates to: ARTWPAPSWQVHLGL*RHMHFLANSALAST
Trigger: GGTGGAGGCCAAGGCAGAGTTGGCTAAGAAGTGCATGTGGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 90 bp AGGCTTCAGAGAGGTAGACACACAGGCACTCGATTCGTCAGGCGGTaGCCATCAGTCAATGTGACCGGCCGGGGCCAGCAACCAGGGCTC +
Preference number: 1 (lower is better)
Translates to: RLQRGRHTGTRFVRR*PSVNVTGRGQQPGL
Trigger: GAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGCCTGTGTGTCTACCTCTCTGAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 90 bp TTTGGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTaGCCAGGAGTCCTTGGGAGGCCCCGTCACCCAAGAACCCCTCAC +
Preference number: 1 (lower is better)
Translates to: FGRVWSSWRHQLTGL*PGVLGRPRHPRTPH
Trigger: GTGAGGGGTTCTTGGGTGACGGGGCCTCCCAAGGACTCCTGGCCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR CCA 90 bp CGAGCTGTCTGTGGAACTCTCAGCCTTGTGCACTGGCTGAATGCTTaGCCCCTGGGCTGTGATGTTCCCGTTCTGGGGCGATGGCTCCTT +
Preference number: 1 (lower is better)
Translates to: RAVCGTLSLVHWLNA*PLGCDVPVLGRWLL
Trigger: AAGGAGCCATCGCCCCAGAACGGGAACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR GCA 90 bp AGCAAACCAACCAACCAAACAGGCTGGTACTTAGGGAGGGTCTCCTaGTCCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGC +
Preference number: 1 (lower is better)
Translates to: SKPTNQTGWYLGRVS*STGFLCARTWPAPS
Trigger: GCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGGAGCAGGAGACCCTCCCTAAGTACCAGCCTGTTTGGTTGGTTGGTTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 90 bp GGCCTGGGTCGGCTTCCTGTGGGTGCTCATCTTGGAGCCAAGAGCTaGCTGTGGGAATCATGGTGCTCAGGCTTCAGAGAGGTAGACACA +
Preference number: 1 (lower is better)
Translates to: GLGRLPVGAHLGAKS*LWESWCSGFREVDT
Trigger: TGTGTCTACCTCTCTGAAGCCTGAGCACCATGATTCCCACAGCCAGCTCTTGGCTCCAAGATGAGCACCCACAGGAAGCCGACCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 90 bp GGCCATGGTTTTATAGGACCCAAATTCTTCTTTCCCCTAAGCTGCTaGTGCTGGCGGTCACTGATGGGAGAGGGAGGGCTGGCGCCTCCC +
Preference number: 1 (lower is better)
Translates to: GHGFIGPKFFFPLSC*CWRSLMGEGGLAPP
Trigger: GGGAGGCGCCAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTATAAAACCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR TCA 90 bp GGCCTCCACCTCACTCCCAGGAGCTTTGCCGGTTCGTTGCTCAGCTaGTCTCTTGACCCTTCCAGTGTCTGGCCTTCTTCTCCTGATGAG +
Preference number: 1 (lower is better)
Translates to: GLHLTPRSFAGSLLS*SLDPSSVWPSSPDE
Trigger: CTCATCAGGAGAAGAAGGCCAGACACTGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGAGGTGGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 90 bp GGTCGGCTTCCTGTGGGTGCTCATCTTGGAGCCAAGAGCTGGCTGTaGGAATCATGGTGCTCAGGCTTCAGAGAGGTAGACACACAGGCA +
Preference number: 1 (lower is better)
Translates to: GRLPVGAHLGAKSWL*ESWCSGFREVDTQA
Trigger: TGCCTGTGTGTCTACCTCTCTGAAGCCTGAGCACCATGATTCCCACAGCCAGCTCTTGGCTCCAAGATGAGCACCCACAGGAAGCCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 90 bp TGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTaGCTCCATCTTTGTGCCTCCAGGGCTGAGCACAGGCCTGGCACA +
Preference number: 1 (lower is better)
Translates to: WPSSPDEKTPRHRTD*LHLCASRAEHRPGT
Trigger: TGTGCCAGGCCTGTGCTCAGCCCTGGAGGCACAAAGATGGAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 90 bp GGTTTTATAGGACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTaGCGGTCACTGATGGGAGAGGGAGGGCTGGCGCCTCCCTGTGCT +
Preference number: 1 (lower is better)
Translates to: GFIGPKFFFPLSCWC*RSLMGEGGLAPPCA
Trigger: AGCACAGGGAGGCGCCAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTATAAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR GCA 90 bp GCAGCTCTCTGTGTCTGTGATGATGGAGCTGGGTTGGGGAAATCCTaGTGTGACATTTGCCCTGACGCAGTTCCGCACAGCATGGTGGCT +
Preference number: 1 (lower is better)
Translates to: AALCVCDDGAGLGKS*CDICPDAVPHSMVA
Trigger: AGCCACCATGCTGTGCGGAACTGCGTCAGGGCAAATGTCACAGCAGGATTTCCCCAACCCAGCTCCATCATCACAGACACAGAGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR GCA 90 bp CATGGTTTTATAGGACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTaGTGGCGGTCACTGATGGGAGAGGGAGGGCTGGCGCCTCCCTGT +
Preference number: 1 (lower is better)
Translates to: HGFIGPKFFFPLSCW*WRSLMGEGGLAPPC
Trigger: ACAGGGAGGCGCCAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTATAAAACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR GCA 90 bp ACAGGCCATGGTTTTATAGGACCCAAATTCTTCTTTCCCCTAAGCTaGTGGTGCTGGCGGTCACTGATGGGAGAGGGAGGGCTGGCGCCT +
Preference number: 1 (lower is better)
Translates to: TGHGFIGPKFFFPLS*WCWRSLMGEGGLAP
Trigger: AGGCGCCAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTATAAAACCATGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR CCA 90 bp CCTGTGGGTGCTCATCTTGGAGCCAAGAGCTGGCTGTGGGAATCATaGTGCTCAGGCTTCAGAGAGGTAGACACACAGGCACTCGATTCG +
Preference number: 1 (lower is better)
Translates to: PVGAHLGAKSWLWES*CSGFREVDTQALDS
Trigger: CGAATCGAGTGCCTGTGTGTCTACCTCTCTGAAGCCTGAGCACCATGATTCCCACAGCCAGCTCTTGGCTCCAAGATGAGCACCCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 90 bp GCTGGCAGGCCCTGCTTTTCCCAGCAGCATTCCTGTGGGGCAGCGTaGTATGAGGGCAGACAAGAATCTCATATGAAGGAAGAGGACAGG +
Preference number: 1 (lower is better)
Translates to: AGRPCFSQQHSCGAA*YEGRQESHMKEEDR
Trigger: CCTGTCCTCTTCCTTCATATGAGATTCTTGTCTGCCCTCATATCACGCTGCCCCACAGGAATGCTGCTGGGAAAAGCAGGGCCTGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR GCA 90 bp GTGGGTGCTCATCTTGGAGCCAAGAGCTGGCTGTGGGAATCATGGTaGTCAGGCTTCAGAGAGGTAGACACACAGGCACTCGATTCGTCA +
Preference number: 1 (lower is better)
Translates to: VGAHLGAKSWLWESW*SGFREVDTQALDSS
Trigger: TGACGAATCGAGTGCCTGTGTGTCTACCTCTCTGAAGCCTGAGCACCATGATTCCCACAGCCAGCTCTTGGCTCCAAGATGAGCACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 90 bp CCTGGCCTGGAAGATTCTTGGGGCCCTCCTGATGCTAAGATTCTGTaGCTCGGGGTGACTCTATTGCTCATCATCCAGGTCACCTCTAGG +
Preference number: 1 (lower is better)
Translates to: PGLEDSWGPPDAKIL*LGVTLLLIIQVTSR
Trigger: CCTAGAGGTGACCTGGATGATGAGCAATAGAGTCACCCCGAGTCACAGAATCTTAGCATCAGGAGGGCCCCAAGAATCTTCCAGGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 90 bp GAGGGCAGACAAGAATCTCATATGAAGGAAGAGGACAGGGGCTTGTaGACCCACAGGGGCTCTGGGACAGGCAATGTGCAAGCAGATGAA +
Preference number: 1 (lower is better)
Translates to: EGRQESHMKEEDRGL*THRGSGTGNVQADE
Trigger: TTCATCTGCTTGCACATTGCCTGTCCCAGAGCCCCTGTGGGTCCACAAGCCCCTGTCCTCTTCCTTCATATGAGATTCTTGTCTGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 90 bp AAGATTCTTGGGGCCCTCCTGATGCTAAGATTCTGTGACTCGGGGTaGCTCTATTGCTCATCATCCAGGTCACCTCTAGGCTCCCACCAG +
Preference number: 1 (lower is better)
Translates to: KILGALLMLRFCDSG*LYCSSSRSPLGSHQ
Trigger: CTGGTGGGAGCCTAGAGGTGACCTGGATGATGAGCAATAGAGTCACCCCGAGTCACAGAATCTTAGCATCAGGAGGGCCCCAAGAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 90 bp CAGCACCCTCTCAATGCCATGTGGACCCTCCTCAATGTGATTGAATaGCCGTGTTTCTTGCAGCAAGCTCCTTGTAAGAATCGCTTTAGG +
Preference number: 1 (lower is better)
Translates to: QHPLNAMWTLLNVIE*PCFLQQAPCKNRFR
Trigger: CCTAAAGCGATTCTTACAAGGAGCTTGCTGCAAGAAACACGGTCATTCAATCACATTGAGGAGGGTCCACATGGCATTGAGAGGGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 90 bp AAAGCTTGGTTCTCACTTCTTCAGTTCAATACAGCACACCTTTATTaGGCACCTAAGGATCTATGCTGCCAGAGGAGGGCAGAGTCGACA +
Preference number: 1 (lower is better)
Translates to: KAWFSLLQFNTAHLY*APKDLCCQRRAEST
Trigger: TGTCGACTCTGCCCTCCTCTGGCAGCATAGATCCTTAGGTGCTCAATAAAGGTGTGCTGTATTGAACTGAAGAAGTGAGAACCAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 90 bp ATTTCTCCTTATCATTCTTCCTTCAGGGGAAGTATTGAAAGTCATTaGAAGTCATCCCCACCCACTAGAGGAGAGAAACGCAAGCCCAGA +
Preference number: 1 (lower is better)
Translates to: ISPYHSSFRGSIESH*KSSPPTRGEKRKPR
Trigger: TCTGGGCTTGCGTTTCTCTCCTCTAGTGGGTGGGGATGACTTTCAATGACTTTCAATACTTCCCCTGAAGGAAGAATGATAAGGAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 90 bp AACCACAGAGACCAGCCTCTAACGTTTGAAATTATGGGGTTGAGGTaGGCTGAATTTGCAGCTTTTCAGATTGCCTCTGAACAGCAAATA +
Preference number: 1 (lower is better)
Translates to: NHRDQPLTFEIMGLR*AEFAAFQIASEQQI
Trigger: TATTTGCTGTTCAGAGGCAATCTGAAAAGCTGCAAATTCAGCTCACCTCAACCCCATAATTTCAAACGTTAGAGGCTGGTCTCTGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 90 bp TTCCTGAAATTCTCCATCAGTCACAAACACAAATTGTTCAGTATCTaGGGAATTCAAAGCCCTTTCCTCAAAACAGACATTTCTCCTTAT +
Preference number: 1 (lower is better)
Translates to: FLKFSISHKHKLFSI*GIQSPFLKTDISPY
Trigger: ATAAGGAGAAATGTCTGTTTTGAGGAAAGGGCTTTGAATTCCCCAGATACTGAACAATTTGTGTTTGTGACTGATGGAGAATTTCAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CAA 90 bp AACCGGTGTCGCCGGATGCGCTGGGCCTCACCGGGGGCGCGGCACTaGGGCCTCCTCTGGCTCATGCAACTGGCGTCGCTCTTGGTCCGC +
Preference number: 2 (lower is better)
Translates to: NRCRRMRWASPGARH*GLLWLMQLASLLVR
Trigger: GCGGACCAAGAGCGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR-3UTR GCA 90 bp GCTGGGCCTCACCGGGGGCGCGGCACTTGGGCCTCCTCTGGCTCATGCAACTGGGAGGTGGAGGGGAGGTaGACCTGCTCCCGGTCATCC +
Preference number: 2 (lower is better)
Translates to: AGPHRGRGTWASSGSCNWEVEGR*TCSRSS
Trigger: GGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTC...CCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR-3UTR GCA 90 bp GCTGGGCCTCACCGGGGGCGCGGCACTTGGGCCTCCTCTGGCTCATGCAACTGGTGCTCCCGGTCATCCTaGATCTGCAGCCGGATGGGC +
Preference number: 2 (lower is better)
Translates to: AGPHRGRGTWASSGSCNWCSRSS*ICSRMG
Trigger: GCCCATCCGGCTGCAGATGCAGGATGACCGGGAGCA...CCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR-3UTR GCA 90 bp GCCGTTGATAGAGAACCGGTGTCGCCGGATGCGCTGGGCCTCACCGGGGGCGCGGAGGGGAGGTGCACCTaGTCCCGGTCATCCTGCATC +
Preference number: 2 (lower is better)
Translates to: AVDREPVSPDALGLTGGAEGRCT*SRSSCI
Trigger: GATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTC...CGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGTTCTCTATCAACGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR-3UTR CCA 90 bp GCTGGGCCTCACCGGGGGCGCGGCACTTGGGCCTCCTCTGGCTCATGCAACTGGTGGGCATCCATGAGGTaGAGGGGAGGTGCACCTGCT +
Preference number: 2 (lower is better)
Translates to: AGPHRGRGTWASSGSCNWWASMR*RGGAPA
Trigger: AGCAGGTGCACCTCCCCTCCACCTCATGGATGCCCA...CCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR-3UTR CCA 90 bp CTGCTGGTGCTGGCGGTCACTGATGGGAGAGGGAGGGCTGGCGCCTCCCTGTGCCAACTGACAGGGCTCTaGCCAGGAGTCCTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: LLVLAVTDGRGRAGASLCQLTGL*PGVLGR
Trigger: CCTCCCAAGGACTCCTGGCCAGAGCCCTGTCAGTTG...GCACAGGGAGGCGCCAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR-3UTR TCA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCTTGTGCCTCCAGGGCTaGGCACAGGCCTGGCACAAG +
Preference number: 2 (lower is better)
Translates to: VPGPGLLLAGRCILACDALCLQG*AQAWHK
Trigger: CTTGTGCCAGGCCTGTGCTCAGCCCTGGAGGCACAA...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp GCCTCACCGGGGGCGCGGCACTTGGGCCTCCTCTGGCTCATGCAACTGGCGTCGCACTGGCTGAATGCTTaGCCCCTGGGCTGTGATGTT +
Preference number: 2 (lower is better)
Translates to: ASPGARHLGLLWLMQLASHWLNA*PLGCDV
Trigger: AACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTG...CGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR-3UTR CCA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCGCCAAGAGCTGGCTGTaGGAATCATGGTGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: VPGPGLLLAGRCILACDAAKSWL*ESWCSG
Trigger: GCCTGAGCACCATGATTCCCACAGCCAGCTCTTGGC...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCTGGTGTGGACAGGGCTaGCCACACAGATCTGACCCA +
Preference number: 2 (lower is better)
Translates to: VPGPGLLLAGRCILACDAWCGQG*PHRSDP
Trigger: TGGGTCAGATCTGTGTGGCCAGCCCTGTCCACACCA...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp GCCTCACCGGGGGCGCGGCACTTGGGCCTCCTCTGGCTCATGCAACTGGCGTCGAGTCCCTTCTTCTGGTaGTCTACAAGCACAGATGTG +
Preference number: 2 (lower is better)
Translates to: ASPGARHLGLLWLMQLASSPFFW*STSTDV
Trigger: CACATCTGTGCTTGTAGAGCACCAGAAGAAGGGACT...CGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR-3UTR CCA 90 bp GCCGTTGATAGAGAACCGGTGTCGCCGGATGCGCTGGGCCTCACCGGGGGCGCGCAGAGTCCCTTCTTCTaGTGCTCTACAAGCACAGAT +
Preference number: 2 (lower is better)
Translates to: AVDREPVSPDALGLTGGAQSPFF*CSTSTD
Trigger: ATCTGTGCTTGTAGAGCACCAGAAGAAGGGACTCTG...CGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGTTCTCTATCAACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR-3UTR TCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGGCCATCAGTCAATGTaGCCGGCCGGGGCCAGCAAC +
Preference number: 2 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGGHQSM*PAGASN
Trigger: GTTGCTGGCCCCGGCCGGTCACATTGACTGATGGCC...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTGTGGGTGCTCATCTTaGAGCCAAGAGCTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: PLASCVPGPGLLLAGRCICGCSS*SQELAV
Trigger: CACAGCCAGCTCTTGGCTCCAAGATGAGCACCCACA...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCCTGGCCCCTCAGGCCTaGGTCGGCTTCCTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLLAPQA*VGFLWV
Trigger: CACCCACAGGAAGCCGACCCAGGCCTGAGGGGCCAG...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGCTAAGCCGCAGGGGCTaGGCCAGCACTGCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGLSRRG*ASTALQ
Trigger: CTGGAGAGCAGTGCTGGCCCAGCCCCTGCGGCTTAG...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCGGCCTGGAAGATTCTTaGGGCCCTCCTGATGCTAAG +
Preference number: 2 (lower is better)
Translates to: PLASCVPGPGLLLAGRCIGLEDS*GPPDAK
Trigger: CTTAGCATCAGGAGGGCCCCAAGAATCTTCCAGGCC...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp GCCCTGACGCAGTTCCGCACAGCATGGTGGCTTCCAAGCTATGCTCTTGATGGGGATGGGGCTGAGCACTaGCTTCCAGAGCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: ALTQFRTAWWLPSYALDGDGAEH*LPELLL
Trigger: CAGCAGCAGCTCTGGAAGGCAGTGCTCAGCCCCATC...CCCATCAAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAACTGCGTCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCGCTTTGCCGGTTCGTTaGTCAGCTGATCTCTTGACC +
Preference number: 2 (lower is better)
Translates to: PLASCVPGPGLLLAGRCIALPVR*SADLLT
Trigger: GGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGC...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGAGGACAGGGGCTTGTaGACCCACAGGGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGEDRGL*THRGSG
Trigger: CCCAGAGCCCCTGTGGGTCCACAAGCCCCTGTCCTC...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCCTGTGGGAATCATGGTaGTCAGGCTTCAGAGAGGTA +
Preference number: 2 (lower is better)
Translates to: PLASCVPGPGLLLAGRCILWESW*SGFREV
Trigger: TACCTCTCTGAAGCCTGAGCACCATGATTCCCACAG...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCCGCCTGCGTGTTCCATaGCAGCCTCTCCTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLRLRVP*QPLLRL
Trigger: GAGCCTGAGGAGAGGCTGCCATGGAACACGCAGGCG...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCCTGGCCACACAGATCTaGCCCAGCAAGTTCCTGGCC +
Preference number: 2 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLLATQI*PSKFLA
Trigger: GGCCAGGAACTTGCTGGGTCAGATCTGTGTGGCCAG...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCGATGCTAAGATTCTGTaGCTCGGGGTGACTCTATTG +
Preference number: 2 (lower is better)
Translates to: PLASCVPGPGLLLAGRCIDAKIL*LGVTLL
Trigger: CAATAGAGTCACCCCGAGTCACAGAATCTTAGCATC...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCCTGGGAGCTCCTGTTTaGTTTGTTTTGTACCCTCTC +
Preference number: 2 (lower is better)
Translates to: PLASCVPGPGLLLAGRCILGAPV*FVLYPL
Trigger: GAGAGGGTACAAAACAAATCAAACAGGAGCTCCCAG...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp GCCCTGACGCAGTTCCGCACAGCATGGTGGCTTCCAAGCTATGCTCTTGATGGGGCAGCACCCTCTCAATaGCATGTGGACCCTCCTCAA +
Preference number: 2 (lower is better)
Translates to: ALTQFRTAWWLPSYALDGAAPSQ*HVDPPQ
Trigger: TTGAGGAGGGTCCACATGGCATTGAGAGGGTGCTGC...CCCATCAAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAACTGCGTCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp ACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTGGCGGTCACTGATGGGAGACCTGGAGACATCAACTaGCAGGGCTCTGGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: TQILLSPKLLVLAVTDGRPGDIN*QGSGQE
Trigger: CTCCTGGCCAGAGCCCTGTCAGTTGATGTCTCCAGG...TCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR-3UTR GCA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATACCTGCTGGCAGGCCCTaGTTTTCCCAGCAGCATTCC +
Preference number: 2 (lower is better)
Translates to: RSRGHCGKVMAESRLDLIPAGRP*FSQQHS
Trigger: GGAATGCTGCTGGGAAAAGCAGGGCCTGCCAGCAGG...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGTACACCTGCCACTGCTaGGGACTTTGGAAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAEYTCHC*GLWKRQ
Trigger: CTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTA...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCTGGGTCGGCTTCCTGTaGGTGCTCATCTTGGAGCCA +
Preference number: 2 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLWVGFL*VLILEP
Trigger: TGGCTCCAAGATGAGCACCCACAGGAAGCCGACCCA...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CAA 90 bp ACCTCACTCCCAGGAGCTTTGCCGGTTCGTTGCTCAGCTGATCTCTaGACCCTTCCAGTGTCTGGCCTTCTTCTCCTGATGAGAAGACCC +
Preference number: 2 (lower is better)
Translates to: TSLPGALPVRCSADL*TLPVSGLLLLMRRP
Trigger: GGGTCTTCTCATCAGGAGAAGAAGGCCAGACACTGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATACAATGTGCAAGCAGATaGAGCCTAAGCCGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RSRGHCGKVMAESRLDLIQCASR*SLSRRG
Trigger: GCCCCTGCGGCTTAGGCTTCATCTGCTTGCACATTG...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGTGTACACCTGCCACTaGTGGGGACTTTGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGVYTCH*WGLWKR
Trigger: CCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTACAC...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp TCACTCCCAGGAGCTTTGCCGGTTCGTTGCTCAGCTGATCTCTTGACCCTTCCACGATTCGTCAGGCGGTaGCCATCAGTCAATGTGACC +
Preference number: 2 (lower is better)
Translates to: SLPGALPVRCSADLLTLPRFVRR*PSVNVT
Trigger: GGTCACATTGACTGATGGCCACCGCCTGACGAATCG...TGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCCTTTGCAAGCCTTTGTaGTTCTTCCCTTTAAATCTG +
Preference number: 2 (lower is better)
Translates to: VPGPGLLLAGRCILACDALCKPL*FFPLNL
Trigger: CAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAG...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATGCTGCTGCTGGGCATTaGGCGGGCAGCACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNAAAGH*AGSTLS
Trigger: TGAGAGGGTGCTGCCCGCTCAATGCCCAGCAGCAGC...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTTGGCTGTGGGAATCATaGTGCTCAGGCTTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGWLWES*CSGFRE
Trigger: CTCTCTGAAGCCTGAGCACCATGATTCCCACAGCCA...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CAA 90 bp TATGAGGGCAGACAAGAATCTCATATGAAGGAAGAGGACAGGGGCTaGTGGACCCACAGGGGCTCTGGGACAGGCAATGTGCAAGCAGAT +
Preference number: 2 (lower is better)
Translates to: YEGRQESHMKEEDRG*WTHRGSGTGNVQAD
Trigger: ATCTGCTTGCACATTGCCTGTCCCAGAGCCCCTGTGGGTCCACAAGCCCCTGTCCTCTTCCTTCATATGAGATTCTTGTCTGCCCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATCTAGGCTCCCACCAGTaGCGCCTGCGTGTTCCATGG +
Preference number: 2 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNLGSHQ*RLRVPW
Trigger: CCATGGAACACGCAGGCGTCACTGGTGGGAGCCTAG...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp TGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCAACAGGAGCACTGCTCTCCAGTaGAGGAGAGGCATGGTGTGG +
Preference number: 2 (lower is better)
Translates to: CKPLWFFPLNLPSTDLNRSTALQ*RRGMVW
Trigger: CCACACCATGCCTCTCCTGCACTGGAGAGCAGTGCT...CCTGTTGAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCACTGATGTAAACTGTTaGATAGTTTCGCAAAGGCTT +
Preference number: 2 (lower is better)
Translates to: PLASCVPGPGLLLAGRCITDVNC*IVSQRL
Trigger: AAGCCTTTGCGAAACTATGCAACAGTTTACATCAGT...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCCTAGTCCCCAGGGCATaGACAGAAATGAAGGAGTCA +
Preference number: 2 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLLVPRA*TEMKES
Trigger: TGACTCCTTCATTTCTGTGCATGCCCTGGGGACTAG...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp TGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCAACAGGCACTGCTGGGGACTTTaGAAGAGGCAGGTGTTGGCC +
Preference number: 2 (lower is better)
Translates to: CKPLWFFPLNLPSTDLNRHCWGL*KRQVLA
Trigger: GGCCAACACCTGCCTCTTCCAAAGTCCCCAGCAGTG...CCTGTTGAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGCCTCTCAATGCCATGTaGACCCTCCTCAATGTGATT +
Preference number: 2 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAEPLNAM*TLLNVI
Trigger: AATCACATTGAGGAGGGTCCACATGGCATTGAGAGG...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATCCTCTGTGTTGGGGCTaGGCTGTGCGAGGCTCACAG +
Preference number: 2 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDPLCWG*AVRGSQ
Trigger: CTGTGAGCCTCGCACAGCTCAGCCCCAACACAGAGG...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGGACCCTCCTCAATGTaGTTGAATGACCGTGTTTCT +
Preference number: 2 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGGPSSM*LNDRVS
Trigger: AGAAACACGGTCATTCAATCACATTGAGGAGGGTCC...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATAGGAGAGGCATGGTGTaGACAGGGCTGGCCACACAG +
Preference number: 2 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNRRGMV*TGLATQ
Trigger: CTGTGTGGCCAGCCCTGTCCACACCATGCCTCTCCT...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCTTCCAGAGCTGCTGCTaGGCATTGAGCGGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLFQSCC*ALSGQH
Trigger: GTGCTGCCCGCTCAATGCCCAGCAGCAGCTCTGGAA...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATTCCCACCTGAGCCCCTaGCCTGGAAGATTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNSHLSP*PGRFLG
Trigger: CCCCAAGAATCTTCCAGGCCAGGGGCTCAGGTGGGA...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCGGCTCAGTGTACACCTaGCACTGCTGGGGACTTTGG +
Preference number: 2 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSAGSVYT*HCWGLW
Trigger: CCAAAGTCCCCAGCAGTGGCAGGTGTACACTGAGCC...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGAATGACCGTGTTTCTTaGAGCAAGCTCCTTGTAAGA +
Preference number: 2 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAENDRVS*SKLLVR
Trigger: TCTTACAAGGAGCTTGCTGCAAGAAACACGGTCATT...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATAGTGCAGGAGAGGCATaGTGTGGACAGGGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDSAGEA*CGQGWP
Trigger: TGGCCAGCCCTGTCCACACCATGCCTCTCCTGCACT...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGAAAGTGAGATACTTGTaGCCTTATTCCTGGTCTCAC +
Preference number: 2 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGKVRYL*PYSWSH
Trigger: GTGAGACCAGGAATAAGGCCACAAGTATCTCACTTT...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCGCGAGGCTCACAGGGTaGTATTGGAGGCTTAGAAGC +
Preference number: 2 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLARLTG*YWRLRS
Trigger: GCTTCTAAGCCTCCAATATCACCCTGTGAGCCTCGC...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp TCACTCCCAGGAGCTTTGCCGGTTCGTTGCTCAGCTGATCTCTTGACCCTTCCACTCAATGTGATTGAATaGCCGTGTTTCTTGCAGCAA +
Preference number: 2 (lower is better)
Translates to: SLPGALPVRCSADLLTLPLNVIE*PCFLQQ
Trigger: TTGCTGCAAGAAACACGGTCATTCAATCACATTGAG...TGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCAGTATTGAAAGTCATTaGAAGTCATCCCCACCCACT +
Preference number: 2 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLSIESH*KSSPPT
Trigger: AGTGGGTGGGGATGACTTTCAATGACTTTCAATACT...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp TGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCAACAGGCTGGGACAGGCAATGTaGAAGCAGATGAAGCCTAAG +
Preference number: 2 (lower is better)
Translates to: CKPLWFFPLNLPSTDLNRLGQAM*KQMKPK
Trigger: CTTAGGCTTCATCTGCTTGCACATTGCCTGTCCCAG...CCTGTTGAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCTGGGGCAGCGTGATATaGGGGCAGACAAGAATCTCA +
Preference number: 2 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLWGSVI*GQTRIS
Trigger: TGAGATTCTTGTCTGCCCTCATATCACGCTGCCCCA...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCTGGCAAGGTGATGGCTaGAAGCAGGCTAGATCTCAT +
Preference number: 2 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSAWQGDG*KQARSH
Trigger: ATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCA...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATGCTAGATCTCATACCTaGTGGCAGGCCCTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDARSHT*WQALLF
Trigger: GAAAAGCAGGGCCTGCCAGCAGGTATGAGATCTAGC...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CCA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCAGATCTCATACCTGCTaGCAGGCCCTGCTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLRSHTC*QALLFP
Trigger: TGGGAAAAGCAGGGCCTGCCAGCAGGTATGAGATCT...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CAA 90 bp CGTAAGGAGCTTCTACATGCATTAGAGATGGAGCCTCTCCTATCTTaGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGA +
Preference number: 2 (lower is better)
Translates to: RKELLHALEMEPLLS*QAFVVLPFKSAIHG
Trigger: TCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCATCTCTAATGCATGTAGAAGCTCCTTACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR GCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATAGCCTCTCCTATCTTTaGAAGCCTTTGTGGTTCTTC +
Preference number: 2 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNSLSYL*KPLWFF
Trigger: GAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCT...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CAA 90 bp CAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATAATAGCTaGGGAGTACAATTACCTGGGAGCTCCTGTTTGATTTGTTTTGTA +
Preference number: 2 (lower is better)
Translates to: QWDRSCPPPEIVNNS*GVQLPGSSCLICFV
Trigger: TACAAAACAAATCAAACAGGAGCTCCCAGGTAATTGTACTCCCAAGCTATTATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR TCA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCTTTCTGCAGAGAAAGTaGGATACTTGTGGCCTTATT +
Preference number: 2 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSAFLQRK*DTCGLI
Trigger: AATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAA...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 72 bp GCCGGATGCGCTGGGCCTCACCGGGGGCGCGGCACTTaGGCCTCCTCTGGCTCATGCAACTGGCGTCGCTCT +
Preference number: 3 (lower is better)
Translates to: AGCAGPHRGRGT*ASSGSCNWRRS
Trigger: AGAGCGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR-3UTR CAA 90 bp CCGGTGTCGCCGGATGCGCTGGGCCTCACCGGGGGCGCGGCACTTGGGCCTCCTAGCCCCCAGGCAATGTaGAGGAGCCCCTCGATGATC +
Preference number: 3 (lower is better)
Translates to: PVSPDALGLTGGAALGPPSPQAM*RSPSMI
Trigger: GATCATCGAGGGGCTCCTCAACATTGCCTGGGGGCT...AGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR GCA 72 bp GAGGTGGAGGGGAGGTGCACCTGCTCCCGGTCATCCTaGATCTGCAGCCGGATGGGCCGCCTCAGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: EVEGRCTCSRSS*ICSRMGRLSPQ
Trigger: CTGGGGGCTGAGGCGGCCCATCCGGCTGCAGATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR GCA 72 bp CACCGGGGGCGCGGCACTTGGGCCTCCTCTGGCTCATaGAACTGGCGTCGCTCTTGGTCCGCATCAGCTGGG +
Preference number: 3 (lower is better)
Translates to: HRGRGTWASSGS*NWRRSWSASAG
Trigger: CCCAGCTGATGCGGACCAAGAGCGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR CCA 72 bp TGGGCCTCACCGGGGGCGCGGCACTTGGGCCTCCTCTaGCTCATGCAACTGGCGTCGCTCTTGGTCCGCATC +
Preference number: 3 (lower is better)
Translates to: WASPGARHLGLL*LMQLASLLVRI
Trigger: GATGCGGACCAAGAGCGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR CCA 72 bp TGGGAGAGGGAGGGCTGGCGCCTCCCTGTGCTAGGCTaGGAGCCCTTTGGGAGAGTGTGGAGCTCCTGGAGA +
Preference number: 3 (lower is better)
Translates to: WEREGWRLPVLG*EPFGRVWSSWR
Trigger: TCTCCAGGAGCTCCACACTCTCCCAAAGGGCTCCCAGCCTAGCACAGGGAGGCGCCAGCCCTCCCTCTCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR GCA 72 bp CCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTaGCACTGCTGGGGACTTTGGAAGAGGCAGGTGTTG +
Preference number: 3 (lower is better)
Translates to: PAGASNQGSVYT*HCWGLWKRQVL
Trigger: CAACACCTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 72 bp GCACTCGATTCGTCAGGCGGTGGCCATCAGTCAATGTaGCCGGCCGGGGCCAGCAACCAGGGCTCAGTGTAC +
Preference number: 3 (lower is better)
Translates to: ALDSSGGGHQSM*PAGASNQGSVY
Trigger: GTACACTGAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR GCA 72 bp CAGATGAAGCCTAAGCCGCAGGGGCTGGGCCAGCACTaGTCTCCAGTGCAGGAGAGGCATGGTGTGGACAGG +
Preference number: 3 (lower is better)
Translates to: QMKPKPQGLGQH*SPVQERHGVDR
Trigger: CCTGTCCACACCATGCCTCTCCTGCACTGGAGAGCAGTGCTGGCCCAGCCCCTGCGGCTTAGGCTTCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR GCA 72 bp GCTTGTGGACCCACAGGGGCTCTGGGACAGGCAATGTaGAAGCAGATGAAGCCTAAGCCGCAGGGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: ACGPTGALGQAM*KQMKPKPQGLG
Trigger: GCCCAGCCCCTGCGGCTTAGGCTTCATCTGCTTGCACATTGCCTGTCCCAGAGCCCCTGTGGGTCCACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 72 bp GTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTaGCCAGGAGTCCTTGGGAGGCCCCGTCACCCAAGA +
Preference number: 3 (lower is better)
Translates to: VWSSWRHQLTGL*PGVLGRPRHPR
Trigger: TCTTGGGTGACGGGGCCTCCCAAGGACTCCTGGCCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR-3UTR CAA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCTTCCAAGCTATGCTCTaGATGGGCACCCGTAAGGAG +
Preference number: 3 (lower is better)
Translates to: VPGPGLLLAGRCILACDAFQAML*MGTRKE
Trigger: CTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGAA...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CAA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTGCTCAGCTGATCTCTaGACCCTTCCAGTGTCTGGC +
Preference number: 3 (lower is better)
Translates to: PLASCVPGPGLLLAGRCICSADL*TLPVSG
Trigger: GCCAGACACTGGAAGGGTCAAGAGATCAGCTGAGCA...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 72 bp TGCTCATCATCCAGGTCACCTCTAGGCTCCCACCAGTaGCGCCTGCGTGTTCCATGGCAGCCTCTCCTCAGG +
Preference number: 3 (lower is better)
Translates to: CSSSRSPLGSHQ*RLRVPWQPLLR
Trigger: CCTGAGGAGAGGCTGCCATGGAACACGCAGGCGTCACTGGTGGGAGCCTAGAGGTGACCTGGATGATGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 72 bp AGAGGTAGACACACAGGCACTCGATTCGTCAGGCGGTaGCCATCAGTCAATGTGACCGGCCGGGGCCAGCAA +
Preference number: 3 (lower is better)
Translates to: RGRHTGTRFVRR*PSVNVTGRGQQ
Trigger: TTGCTGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGCCTGTGTGTCTACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 72 bp CCCCGAGCTGTCTGTGGAACTCTCAGCCTTGTGCACTaGCTGAATGCTTGGCCCCTGGGCTGTGATGTTCCC +
Preference number: 3 (lower is better)
Translates to: PRAVCGTLSLVH*LNAWPLGCDVP
Trigger: GGGAACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR CCA 72 bp CTAGGCTGGGAGCCCTTTGGGAGAGTGTGGAGCTCCTaGAGACATCAACTGACAGGGCTCTGGCCAGGAGTC +
Preference number: 3 (lower is better)
Translates to: LGWEPFGRVWSS*RHQLTGLWPGV
Trigger: GACTCCTGGCCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCCAAAGGGCTCCCAGCCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR TCA 72 bp CCTTGTGCACTGGCTGAATGCTTGGCCCCTGGGCTGTaGTGTTCCCGTTCTGGGGCGATGGCTCCTTTAGAG +
Preference number: 3 (lower is better)
Translates to: PCALAECLAPGL*CSRSGAMAPLE
Trigger: CTCTAAAGGAGCCATCGCCCCAGAACGGGAACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR GCA 72 bp ACCAACCAAACAGGCTGGTACTTAGGGAGGGTCTCCTaGTCCACTGGCTTCCTGTGTGCCAGGACCTGGCCT +
Preference number: 3 (lower is better)
Translates to: TNQTGWYLGRVS*STGFLCARTWP
Trigger: AGGCCAGGTCCTGGCACACAGGAAGCCAGTGGAGCAGGAGACCCTCCCTAAGTACCAGCCTGTTTGGTTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 72 bp TGTGGAACTCTCAGCCTTGTGCACTGGCTGAATGCTTaGCCCCTGGGCTGTGATGTTCCCGTTCTGGGGCGA +
Preference number: 3 (lower is better)
Translates to: CGTLSLVHWLNA*PLGCDVPVLGR
Trigger: TCGCCCCAGAACGGGAACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR-3UTR CAA 90 bp ATAGGACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTGGCGGTCACTGATGTCTGGCCAGGAGTCCTaGGGAGGCCCCGTCACCCAA +
Preference number: 3 (lower is better)
Translates to: IGPKFFFPLSCWCWRSLMSGQES*GGPVTQ
Trigger: TTGGGTGACGGGGCCTCCCAAGGACTCCTGGCCAGA...CATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR TCA 72 bp TGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTaGCGCCACATGCACTTCTTAGCCAACTCTGCCTTG +
Preference number: 3 (lower is better)
Translates to: WPAPSWQVHLGL*RHMHFLANSAL
Trigger: CAAGGCAGAGTTGGCTAAGAAGTGCATGTGGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR GCA 72 bp ATAGGACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTaGTGGCGGTCACTGATGGGAGAGGGAGGGCTGGCG +
Preference number: 3 (lower is better)
Translates to: IGPKFFFPLSCW*WRSLMGEGGLA
Trigger: CGCCAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR CCA 72 bp GCTGTGACATTTGCCCTGACGCAGTTCCGCACAGCATaGTGGCTTCCAAGCTATGCTCTTGATGGGCACCCG +
Preference number: 3 (lower is better)
Translates to: AVTFALTQFRTA*WLPSYALDGHP
Trigger: CGGGTGCCCATCAAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAACTGCGTCAGGGCAAATGTCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 72 bp CCTGTGGGTGCTCATCTTGGAGCCAAGAGCTGGCTGTaGGAATCATGGTGCTCAGGCTTCAGAGAGGTAGAC +
Preference number: 3 (lower is better)
Translates to: PVGAHLGAKSWL*ESWCSGFREVD
Trigger: GTCTACCTCTCTGAAGCCTGAGCACCATGATTCCCACAGCCAGCTCTTGGCTCCAAGATGAGCACCCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 72 bp TCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTaGCTCCATCTTTGTGCCTCCAGGGCTGAGCACAGG +
Preference number: 3 (lower is better)
Translates to: SPDEKTPRHRTD*LHLCASRAEHR
Trigger: CCTGTGCTCAGCCCTGGAGGCACAAAGATGGAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CAA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATACTGTGGGTGCTCATCTaGGAGCCAAGAGCTGGCTGT +
Preference number: 3 (lower is better)
Translates to: RSRGHCGKVMAESRLDLILWVLI*EPRAGC
Trigger: ACAGCCAGCTCTTGGCTCCAAGATGAGCACCCACAG...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 72 bp CTCACTCCCAGGAGCTTTGCCGGTTCGTTGCTCAGCTaGTCTCTTGACCCTTCCAGTGTCTGGCCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: LTPRSFAGSLLS*SLDPSSVWPSS
Trigger: AGAAGAAGGCCAGACACTGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR GCA 72 bp TGTGTCTGTGATGATGGAGCTGGGTTGGGGAAATCCTaGTGTGACATTTGCCCTGACGCAGTTCCGCACAGC +
Preference number: 3 (lower is better)
Translates to: CVCDDGAGLGKS*CDICPDAVPHS
Trigger: GCTGTGCGGAACTGCGTCAGGGCAAATGTCACAGCAGGATTTCCCCAACCCAGCTCCATCATCACAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CAA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCATTGTAAATAATAGCTaGGGAGTACAATTACCTGGG +
Preference number: 3 (lower is better)
Translates to: VPGPGLLLAGRCILACDAIVNNS*GVQLPG
Trigger: CCCAGGTAATTGTACTCCCAAGCTATTATTTACAAT...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR GCA 72 bp GGTTTTATAGGACCCAAATTCTTCTTTCCCCTAAGCTaGTGGTGCTGGCGGTCACTGATGGGAGAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: GFIGPKFFFPLS*WCWRSLMGEGG
Trigger: CCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTATAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR CCA 72 bp TTTATAGGACCCAAATTCTTCTTTCCCCTAAGCTGCTaGTGCTGGCGGTCACTGATGGGAGAGGGAGGGCTG +
Preference number: 3 (lower is better)
Translates to: FIGPKFFFPLSC*CWRSLMGEGGL
Trigger: CAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR-3UTR CAA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATGAAGAGGACAGGGGCTaGTGGACCCACAGGGGCTCT +
Preference number: 3 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNEEDRG*WTHRGS
Trigger: AGAGCCCCTGTGGGTCCACAAGCCCCTGTCCTCTTC...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CAA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATAGCTGCTGCTGGGCATaGAGCGGGCAGCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDSCCWA*SGQHPL
Trigger: GAGAGGGTGCTGCCCGCTCAATGCCCAGCAGCAGCT...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CAA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGAGAAAGTGAGATACTaGTGGCCTTATTCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGEKVRY*WPYSWS
Trigger: AGACCAGGAATAAGGCCACAAGTATCTCACTTTCTC...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 72 bp GAAGATTCTTGGGGCCCTCCTGATGCTAAGATTCTGTaGCTCGGGGTGACTCTATTGCTCATCATCCAGGTC +
Preference number: 3 (lower is better)
Translates to: EDSWGPPDAKIL*LGVTLLLIIQV
Trigger: GACCTGGATGATGAGCAATAGAGTCACCCCGAGTCACAGAATCTTAGCATCAGGAGGGCCCCAAGAATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 72 bp AGCACCCTCTCAATGCCATGTGGACCCTCCTCAATGTaGTTGAATGACCGTGTTTCTTGCAGCAAGCTCCTT +
Preference number: 3 (lower is better)
Translates to: STLSMPCGPSSM*LNDRVSCSKLL
Trigger: AAGGAGCTTGCTGCAAGAAACACGGTCATTCAATCACATTGAGGAGGGTCCACATGGCATTGAGAGGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CAA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATCTCGGGGTGACTCTATaGCTCATCATCCAGGTCACC +
Preference number: 3 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDLGVTL*LIIQVT
Trigger: GGTGACCTGGATGATGAGCAATAGAGTCACCCCGAG...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 72 bp ATAGCTTGGGAGTACAATTACCTGGGAGCTCCTGTTTaGTTTGTTTTGTACCCTCTCCTAGGCCCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: IAWEYNYLGAPV*FVLYPLLGPAS
Trigger: GGAAGCAGGGCCTAGGAGAGGGTACAAAACAAATCAAACAGGAGCTCCCAGGTAATTGTACTCCCAAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CCA 72 bp GCTGTTGACCCTCACATTGGTCACGGATCCATAGGCTaGAGTAAACACGGAGGTCTTATGATTGTAGAAGTG +
Preference number: 3 (lower is better)
Translates to: AVDPHIGHGSIG*SKHGGLMIVEV
Trigger: CACTTCTACAATCATAAGACCTCCGTGTTTACTCCAGCCTATGGATCCGTGACCAATGTGAGGGTCAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR TCA 72 bp CTCAATGCCATGTGGACCCTCCTCAATGTGATTGAATaGCCGTGTTTCTTGCAGCAAGCTCCTTGTAAGAAT +
Preference number: 3 (lower is better)
Translates to: LNAMWTLLNVIE*PCFLQQAPCKN
Trigger: ATTCTTACAAGGAGCTTGCTGCAAGAAACACGGTCATTCAATCACATTGAGGAGGGTCCACATGGCATTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 72 bp TATCATTCTTCCTTCAGGGGAAGTATTGAAAGTCATTaGAAGTCATCCCCACCCACTAGAGGAGAGAAACGC +
Preference number: 3 (lower is better)
Translates to: YHSSFRGSIESH*KSSPPTRGEKR
Trigger: GCGTTTCTCTCCTCTAGTGGGTGGGGATGACTTTCAATGACTTTCAATACTTCCCCTGAAGGAAGAATGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR TCA 72 bp GACCAGCCTCTAACGTTTGAAATTATGGGGTTGAGGTaGGCTGAATTTGCAGCTTTTCAGATTGCCTCTGAA +
Preference number: 3 (lower is better)
Translates to: DQPLTFEIMGLR*AEFAAFQIASE
Trigger: TTCAGAGGCAATCTGAAAAGCTGCAAATTCAGCTCACCTCAACCCCATAATTTCAAACGTTAGAGGCTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR-3UTR CAA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCAGTCACAAACACAAATaGTTCAGTATCTGGGGAATT +
Preference number: 3 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSASHKHK*FSIWGI
Trigger: AATTCCCCAGATACTGAACAATTTGTGTTTGTGACT...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CAA 72 bp CGCCGGATGCGCTGGGCCTCACCGGGGGCGCGGCACTaGGGCCTCCTCTGGCTCATGCAACTGGCGTCGCTC +
Preference number: 4 (lower is better)
Translates to: RRMRWASPGARH*GLLWLMQLASL
Trigger: GAGCGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR GCA 90 bp CCGGTGTCGCCGGATGCGCTGGGCCTCACCGGGGGCGCGGCACTTGGGCCTCCTGAGGTGGAGGGGAGGTaGACCTGCTCCCGGTCATCC +
Preference number: 4 (lower is better)
Translates to: PVSPDALGLTGGAALGPPEVEGR*TCSRSS
Trigger: GGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTC...AGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp GCCGTTGATAGAGAACCGGTGTCGCCGGATGCGCTGGGCCTCACCGGGGGCGCGCGGGGGCGCGGCACTTaGGCCTCCTCTGGCTCATGC +
Preference number: 4 (lower is better)
Translates to: AVDREPVSPDALGLTGGARGRGT*ASSGSC
Trigger: GCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCG...CGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGTTCTCTATCAACGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCGCATCTGCAGCCGGATaGGCCGCCTCAGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VPGPGLLLAGRCILACDAASAAG*AASAPR
Trigger: CCTGGGGGCTGAGGCGGCCCATCCGGCTGCAGATGC...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp AGTCAATGTGACCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCACTACCGGTGTCGCCGGATaGGCTGGGCCTCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: SQCDRPGPATRAQCTPATTGVAG*AGPHRG
Trigger: CCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGT...AGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GCATCCATGAGGTGGAGGGGAGGTGCACCTGCTCCCGGTCATCCTGCATCTGCAACCGGTGTCGCCGGATaGGCTGGGCCTCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: ASMRWRGGAPAPGHPASATGVAG*AGPHRG
Trigger: CCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGT...TGCAGATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTCATGGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR TCA 90 bp CTGCTGGTGCTGGCGGTCACTGATGGGAGAGGGAGGGCTGGCGCCTCCCTGTGCCCTGGAGACATCAACTaGCAGGGCTCTGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLVLAVTDGRGRAGASLCPGDIN*QGSGQE
Trigger: CTCCTGGCCAGAGCCCTGTCAGTTGATGTCTCCAGG...GCACAGGGAGGCGCCAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR CCA 90 bp CCAGGGGCCCCGAGCTGTCTGTGGAACTCTCAGCCTTGTGCACTGGCTGAATGCGCATCTGCAGCCGGATaGGCCGCCTCAGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGAPSCLWNSQPCALAECASAAG*AASAPR
Trigger: CCTGGGGGCTGAGGCGGCCCATCCGGCTGCAGATGC...GCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGGCCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp GCTGGGCCTCACCGGGGGCGCGGCACTTGGGCCTCCTCTGGCTCATGCAACTGGGCCCCGAGCTGTCTGTaGAACTCTCAGCCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: AGPHRGRGTWASSGSCNWAPSCL*NSQPCA
Trigger: TGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGGC...CCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp CTGCTGGTGCTGGCGGTCACTGATGGGAGAGGGAGGGCTGGCGCCTCCCTGTGCCCCCCACTCACTTCATaGGGGACTTCCACGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LLVLAVTDGRGRAGASLCPPLTS*GTSTPK
Trigger: CTTGGGCGTGGAAGTCCCCCATGAAGTGAGTGGGGG...GCACAGGGAGGCGCCAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR TCA 90 bp GCGCTGGGCCTCACCGGGGGCGCGGCACTTGGGCCTCCTCTGGCTCATGCAACTTCACTGATGGGCACGTaGGAACTCGGCAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: ALGLTGGAALGPPLAHATSLMGT*ELGRQS
Trigger: AGACTGTCTGCCGAGTTCTCACGTGCCCATCAGTGA...AGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGGTGAGGCCCAGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR TCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCGGCCATCAGTCAATGTaGCCGGCCGGGGCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: PLASCVPGPGLLLAGRCIGHQSM*PAGASN
Trigger: GTTGCTGGCCCCGGCCGGTCACATTGACTGATGGCC...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp GCCGTTGATAGAGAACCGGTGTCGCCGGATGCGCTGGGCCTCACCGGGGGCGCGGCACAGATGTGTCACTaGGCTTCCTCACGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: AVDREPVSPDALGLTGGAAQMCH*ASSRCL
Trigger: GAGACACCGTGAGGAAGCTCAGTGACACATCTGTGC...CGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGTTCTCTATCAACGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp GATAGAGAACCGGTGTCGCCGGATGCGCTGGGCCTCACCGGGGGCGCGGCACTTCTCAGCCTTGTGCACTaGCTGAATGCTTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: DREPVSPDALGLTGGAALLSLVH*LNAWPL
Trigger: CAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAG...AAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGTTCTCTATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCCTGTGTGCCAGGACCTaGCCTGCTCCTAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VPGPGLLLAGRCILACDALCART*PAPSWQ
Trigger: CTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAG...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp AGGCACTCGATTCGTCAGGCGGTGGCCATCAGTCAATGTGACCGGCCGGGGCCATGCTCCCGGTCATCCTaGATCTGCAGCCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: RHSIRQAVAISQCDRPGPCSRSS*ICSRMG
Trigger: GCCCATCCGGCTGCAGATGCAGGATGACCGGGAGCA...TGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCCCTGCTGGCAGGCCCTaGTTTTCCCAGCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: VPGPGLLLAGRCILACDAPAGRP*FSQQHS
Trigger: GGAATGCTGCTGGGAAAAGCAGGGCCTGCCAGCAGG...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp AGGCACTCGATTCGTCAGGCGGTGGCCATCAGTCAATGTGACCGGCCGGGGCCACACTGGCTTCCTGTGTaGCAGGACCTGGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RHSIRQAVAISQCDRPGPHWLPV*QDLACS
Trigger: GGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTG...TGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CGCGGCACTTGGGCCTCCTCTGGCTCATGCAACTGGCGTCGCTCTTGGTCCGCACACTTGGGCCTCCTCTaGCTCATGCAACTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: RGTWASSGSCNWRRSWSAHLGLL*LMQLAS
Trigger: CGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTG...TGCGGACCAAGAGCGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR TCA 90 bp GCTGTCTGTGGAACTCTCAGCCTTGTGCACTGGCTGAATGCTTGGCCCCTGGGCTTGGCCCCTGGGCTGTaGTGTTCCCGTTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: AVCGTLSLVHWLNAWPLGLAPGL*CSRSGA
Trigger: CGCCCCAGAACGGGAACATCACAGCCCAGGGGCCAA...GCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR TCA 90 bp GCATCCATGAGGTGGAGGGGAGGTGCACCTGCTCCCGGTCATCCTGCATCTGCAGCCTTGTGCACTGGCTaGATGCTTGGCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ASMRWRGGAPAPGHPASAALCTG*MLGPWA
Trigger: AGCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGC...TGCAGATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTCATGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR TCA 90 bp AGGCACTCGATTCGTCAGGCGGTGGCCATCAGTCAATGTGACCGGCCGGGGCCACTGGCCACACAGATCTaGCCCAGCAAGTTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RHSIRQAVAISQCDRPGPLATQI*PSKFLA
Trigger: GGCCAGGAACTTGCTGGGTCAGATCTGTGTGGCCAG...TGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GGCGATGGCTCCTTTAGAGGGCAGCTAGGCCGTCTGGGCATCCATGAGGTGGAGTGCTCCCGGTCATCCTaGATCTGCAGCCGGATGGGC +
Preference number: 4 (lower is better)
Translates to: GDGSFRGQLGRLGIHEVECSRSS*ICSRMG
Trigger: GCCCATCCGGCTGCAGATGCAGGATGACCGGGAGCA...CTCCACCTCATGGATGCCCAGACGGCCTAGCTGCCCTCTAAAGGAGCCATCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR GCA 90 bp AGTCAATGTGACCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCACTGAGGGGAGGTGCACCTaGTCCCGGTCATCCTGCATC +
Preference number: 4 (lower is better)
Translates to: SQCDRPGPATRAQCTPATEGRCT*SRSSCI
Trigger: GATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTC...AGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CTGCTGGTGCTGGCGGTCACTGATGGGAGAGGGAGGGCTGGCGCCTCCCTGTGCAGAGTGTGGAGCTCCTaGAGACATCAACTGACAGGG +
Preference number: 4 (lower is better)
Translates to: LLVLAVTDGRGRAGASLCRVWSS*RHQLTG
Trigger: CCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCT...GCACAGGGAGGCGCCAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR TCA 90 bp CGCGGCACTTGGGCCTCCTCTGGCTCATGCAACTGGCGTCGCTCTTGGTCCGCATGGACTTGCTGTCACTaGTGGGCACGTGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: RGTWASSGSCNWRRSWSAWTCCH*WARENS
Trigger: CGAGTTCTCACGTGCCCATCAGTGACAGCAAGTCCA...TGCGGACCAAGAGCGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTGCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR GCA 90 bp GATAGAGAACCGGTGTCGCCGGATGCGCTGGGCCTCACCGGGGGCGCGGCACTTTCAGCTGGAAGCTCTTaGCCTCATGGTAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: DREPVSPDALGLTGGAALSAGSS*PHGSSC
Trigger: ACAACTGCTACCATGAGGGCAAGAGCTTCCAGCTGA...AAGTGCCGCGCCCCCGGTGAGGCCCAGCGCATCCGGCGACACCGGTTCTCTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR GCA 90 bp TTCTGGGGCGATGGCTCCTTTAGAGGGCAGCTAGGCCGTCTGGGCATCCATGAGGAGGGGAGGTGCACCTaGTCCCGGTCATCCTGCATC +
Preference number: 4 (lower is better)
Translates to: FWGDGSFRGQLGRLGIHEEGRCT*SRSSCI
Trigger: GATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTC...CTCATGGATGCCCAGACGGCCTAGCTGCCCTCTAAAGGAGCCATCGCCCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR GCA 90 bp AGGCACTCGATTCGTCAGGCGGTGGCCATCAGTCAATGTGACCGGCCGGGGCCAGGCTCAGTGTACACCTaGCACTGCTGGGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: RHSIRQAVAISQCDRPGPGSVYT*HCWGLW
Trigger: CCAAAGTCCCCAGCAGTGGCAGGTGTACACTGAGCC...TGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp TTCCAGAGCTGCTGCTGGGCATTGAGCGGGCAGCACCCTCTCAATGCCATGTGGGCCTTCCAGAGCTGCTaGTGGGCATTGAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: FQSCCWALSGQHPLNAMWAFQSC*WALSGQ
Trigger: CTGCCCGCTCAATGCCCAGCAGCAGCTCTGGAAGGC...CCACATGGCATTGAGAGGGTGCTGCCCGCTCAATGCCCAGCAGCAGCTCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp AGTCAATGTGACCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCACTAGTGCAGGAGAGGCATaGTGTGGACAGGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SQCDRPGPATRAQCTPATSAGEA*CGQGWP
Trigger: TGGCCAGCCCTGTCCACACCATGCCTCTCCTGCACT...AGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp AGGCACTCGATTCGTCAGGCGGTGGCCATCAGTCAATGTGACCGGCCGGGGCCACTGGCAGGTGCATCTTaGCCTGTGACGCCACATGCA +
Preference number: 4 (lower is better)
Translates to: RHSIRQAVAISQCDRPGPLAGAS*PVTPHA
Trigger: TGCATGTGGCGTCACAGGCCAAGATGCACCTGCCAG...TGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTGGCCAGGAGTCAGGCCTCCCCAGCCTTaGCCCCCACTCACTTCATGG +
Preference number: 4 (lower is better)
Translates to: GRVWSSWRHQLTGLWPGVRPPQP*PPLTSW
Trigger: CCATGAAGTGAGTGGGGGCCAAGGCTGGGGAGGCCT...GACTCCTGGCCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR TCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGTTGGCCCCTGGGCTGTaGTGTTCCCGTTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGLAPGL*CSRSGA
Trigger: CGCCCCAGAACGGGAACATCACAGCCCAGGGGCCAA...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp GCCCTGACGCAGTTCCGCACAGCATGGTGGCTTCCAAGCTATGCTCTTGATGGGCTAGGCTCCCACCAGTaGCGCCTGCGTGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: ALTQFRTAWWLPSYALDGLGSHQ*RLRVPW
Trigger: CCATGGAACACGCAGGCGTCACTGGTGGGAGCCTAG...CCCATCAAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAACTGCGTCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp AGGCACTCGATTCGTCAGGCGGTGGCCATCAGTCAATGTGACCGGCCGGGGCCACAGTCCAGAAGCCACTaGATGTGTCGTGTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: RHSIRQAVAISQCDRPGPQSRSH*MCRVLA
Trigger: AGCGAGGACACGACACATGCAGTGGCTTCTGGACTG...TGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp AGTCAATGTGACCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCACTCTCAGCCTTGTGCACTaGCTGAATGCTTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SQCDRPGPATRAQCTPATLSLVH*LNAWPL
Trigger: CAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAG...AGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GGCGATGGCTCCTTTAGAGGGCAGCTAGGCCGTCTGGGCATCCATGAGGTGGAGTCTGGCTCATGCAACTaGCGTCGCTCTTGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: GDGSFRGQLGRLGIHEVESGSCN*RRSWSA
Trigger: TGCGGACCAAGAGCGACGCCAGTTGCATGAGCCAGA...CTCCACCTCATGGATGCCCAGACGGCCTAGCTGCCCTCTAAAGGAGCCATCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp AGTCAATGTGACCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCACTTGGGTCGGCTTCCTGTaGGTGCTCATCTTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SQCDRPGPATRAQCTPATWVGFL*VLILEP
Trigger: TGGCTCCAAGATGAGCACCCACAGGAAGCCGACCCA...AGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGGAGGACAGGGGCTTGTaGACCCACAGGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAEEDRGL*THRGSG
Trigger: CCCAGAGCCCCTGTGGGTCCACAAGCCCCTGTCCTC...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp CTCCAGGGGCCCCGAGCTGTCTGTGGAACTCTCAGCCTTGTGCACTGGCTGAATTGTTCAGCAGCAGGGTaGGCACCTGCAGGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LQGPRAVCGTLSLVHWLNCSAAG*APAGLS
Trigger: TGACAACCCTGCAGGTGCTCACCCTGCTGCTGAACA...ATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGGCCCCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR TCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCGTGCATCTTGGCCTGTaGCGCCACATGCACTTCTTA +
Preference number: 4 (lower is better)
Translates to: PLASCVPGPGLLLAGRCIVHLGL*RHMHFL
Trigger: TAAGAAGTGCATGTGGCGTCACAGGCCAAGATGCAC...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCGAGGTGGAGGGGAGGTaGACCTGCTCCCGGTCATCC +
Preference number: 4 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLEVEGR*TCSRSS
Trigger: GGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTC...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp CCGAGCTGTCTGTGGAACTCTCAGCCTTGTGCACTGGCTGAATGCTTGGCCCCTGCCTCCTCTGGCTCATaGAACTGGCGTCGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PSCLWNSQPCALAECLAPASSGS*NWRRSW
Trigger: CCAAGAGCGACGCCAGTTGCATGAGCCAGAGGAGGC...AGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR GCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGCCCACCAGTGACGCCTaGGTGTTCCATGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGPTSDA*VFHGSL
Trigger: GAGGCTGCCATGGAACACGCAGGCGTCACTGGTGGG...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GGCGATGGCTCCTTTAGAGGGCAGCTAGGCCGTCTGGGCATCCATGAGGTGGAGTCACGGTGTCTCAGCTaGAAGCTCTTGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: GDGSFRGQLGRLGIHEVESRCLS*KLLPSW
Trigger: CCATGAGGGCAAGAGCTTCCAGCTGAGACACCGTGA...CTCCACCTCATGGATGCCCAGACGGCCTAGCTGCCCTCTAAAGGAGCCATCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp CCAGGGGCCCCGAGCTGTCTGTGGAACTCTCAGCCTTGTGCACTGGCTGAATGCCACTGGCTGAATGCTTaGCCCCTGGGCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: PGAPSCLWNSQPCALAECHWLNA*PLGCDV
Trigger: AACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTG...GCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGGCCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp AGTCAATGTGACCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCACTTGTTGGCCAGTTACTTaGCCTCCACCAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SQCDRPGPATRAQCTPATCWPVT*PPPAAP
Trigger: TGGAGCAGCTGGTGGAGGCCAAGTAACTGGCCAACA...AGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp AGTCAATGTGACCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCACTGGAAGAGGCAGGTGTTaGCCAGTTACTTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SQCDRPGPATRAQCTPATGRGRC*PVTWPP
Trigger: TGGAGGCCAAGTAACTGGCCAACACCTGCCTCTTCC...AGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TTCCAGAGCTGCTGCTGGGCATTGAGCGGGCAGCACCCTCTCAATGCCATGTGGCACTGCTGGGGACTTTaGAAGAGGCAGGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: FQSCCWALSGQHPLNAMWHCWGL*KRQVLA
Trigger: GGCCAACACCTGCCTCTTCCAAAGTCCCCAGCAGTG...CCACATGGCATTGAGAGGGTGCTGCCCGCTCAATGCCCAGCAGCAGCTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTGGCTGTGGGAATCATaGTGCTCAGGCTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: PLASCVPGPGLLLAGRCIWLWES*CSGFRE
Trigger: CTCTCTGAAGCCTGAGCACCATGATTCCCACAGCCA...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCGTTACAGCTGAACAATaGGACAGGAGCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VPGPGLLLAGRCILACDAVTAEQ*DRSCPP
Trigger: TGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAAC...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp GGCGATGGCTCCTTTAGAGGGCAGCTAGGCCGTCTGGGCATCCATGAGGTGGAGTTGTCATGGTGCTGTTaGCCCTCACATTGGTCACGG +
Preference number: 4 (lower is better)
Translates to: GDGSFRGQLGRLGIHEVELSWCC*PSHWSR
Trigger: CCGTGACCAATGTGAGGGTCAACAGCACCATGACAA...CTCCACCTCATGGATGCCCAGACGGCCTAGCTGCCCTCTAAAGGAGCCATCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR GCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGGCCTCCTCTGGCTCATaGAACTGGCGTCGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAEASSGS*NWRRSW
Trigger: CCAAGAGCGACGCCAGTTGCATGAGCCAGAGGAGGC...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTAGCTGCTCCAGGCGCTaGAGCATCGTCAGACGCAGG +
Preference number: 4 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGSCSRR*SIVRRR
Trigger: CCTGCGTCTGACGATGCTGCAGCGCCTGGAGCAGCT...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GGCGATGGCTCCTTTAGAGGGCAGCTAGGCCGTCTGGGCATCCATGAGGTGGAGGTGATGTTCCCGTTCTaGGGCGATGGCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: GDGSFRGQLGRLGIHEVEVMFPF*GDGSFR
Trigger: TCTAAAGGAGCCATCGCCCCAGAACGGGAACATCAC...CTCCACCTCATGGATGCCCAGACGGCCTAGCTGCCCTCTAAAGGAGCCATCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp TTCCAGAGCTGCTGCTGGGCATTGAGCGGGCAGCACCCTCTCAATGCCATGTGGTACACCTGCCACTGCTaGGGACTTTGGAAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FQSCCWALSGQHPLNAMWYTCHC*GLWKRQ
Trigger: CTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTA...CCACATGGCATTGAGAGGGTGCTGCCCGCTCAATGCCCAGCAGCAGCTCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGAGGAGAGGCATGGTGTaGACAGGGCTGGCCACACAG +
Preference number: 4 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAERRGMV*TGLATQ
Trigger: CTGTGTGGCCAGCCCTGTCCACACCATGCCTCTCCT...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATACTAAGCCGCAGGGGCTaGGCCAGCACTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSRGHCGKVMAESRLDLILSRRG*ASTALQ
Trigger: CTGGAGAGCAGTGCTGGCCCAGCCCCTGCGGCTTAG...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp AGTCAATGTGACCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCACTAGATCTCATACCTGCTaGCAGGCCCTGCTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SQCDRPGPATRAQCTPATRSHTC*QALLFP
Trigger: TGGGAAAAGCAGGGCCTGCCAGCAGGTATGAGATCT...AGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGGTCACATTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGTTCCAGAGCTGCTGCTaGGCATTGAGCGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAEFQSCC*ALSGQH
Trigger: GTGCTGCCCGCTCAATGCCCAGCAGCAGCTCTGGAA...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp ACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTGGCGGTCACTGATGGGAGACTGGCCAGGAGTCCTTaGGAGGCCCCGTCACCCAAG +
Preference number: 4 (lower is better)
Translates to: TQILLSPKLLVLAVTDGRLARSP*EAPSPK
Trigger: CTTGGGTGACGGGGCCTCCCAAGGACTCCTGGCCAG...TCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR TCA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATAGCCTTGTGCACTGGCTaGATGCTTGGCCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSRGHCGKVMAESRLDLIALCTG*MLGPWA
Trigger: AGCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGC...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGTGTTCAGCAGCAGGGTaGGCACCTGCAGGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAECSAAG*APAGLS
Trigger: TGACAACCCTGCAGGTGCTCACCCTGCTGCTGAACA...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATACCTCTGTGTTGGGGCTaGGCTGTGCGAGGCTCACAG +
Preference number: 4 (lower is better)
Translates to: RSRGHCGKVMAESRLDLIPLCWG*AVRGSQ
Trigger: CTGTGAGCCTCGCACAGCTCAGCCCCAACACAGAGG...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp AGGCACTCGATTCGTCAGGCGGTGGCCATCAGTCAATGTGACCGGCCGGGGCCAGGACCCTCCTCAATGTaGTTGAATGACCGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: RHSIRQAVAISQCDRPGPGPSSM*LNDRVS
Trigger: AGAAACACGGTCATTCAATCACATTGAGGAGGGTCC...TGGCCCCGGCCGGTCACATTGACTGATGGCCACCGCCTGACGAATCGAGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATATTGTGCCTCCAGGGCTaGGCACAGGCCTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: RSRGHCGKVMAESRLDLILCLQG*AQAWHK
Trigger: CTTGTGCCAGGCCTGTGCTCAGCCCTGGAGGCACAA...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCGGGGTTGAGGTGAGCTaGATTTGCAGCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PLASCVPGPGLLLAGRCIGVEVS*ICSFSD
Trigger: ATCTGAAAAGCTGCAAATTCAGCTCACCTCAACCCC...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTGGCCAGGAGTCGTGAACGATGTAGAGTaGGAACTCACTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: GRVWSSWRHQLTGLWPGVVNDVE*ELTGAI
Trigger: GATGGCCCCAGTGAGTTCGCACTCTACATCGTTCAC...GACTCCTGGCCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR GCA 90 bp TCACTCCCAGGAGCTTTGCCGGTTCGTTGCTCAGCTGATCTCTTGACCCTTCCACTCCTAGCTGGCAGGTaGATCTTGGCCTGTGACGCC +
Preference number: 4 (lower is better)
Translates to: SLPGALPVRCSADLLTLPLLAGR*ILACDA
Trigger: GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAG...TGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GGACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTGGCGGTCACTGATGGGACCCCTAAGCTGCTGGTaGTGGCGGTCACTGATGGGA +
Preference number: 4 (lower is better)
Translates to: GPKFFFPLSCWCWRSLMGPLSCW*WRSLMG
Trigger: TCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGG...TCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR GCA 90 bp GAGCCCTTTGGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTGGTTCTTTCCCCTAAGCTaGTGGTGCTGGCGGTCACTG +
Preference number: 4 (lower is better)
Translates to: EPFGRVWSSWRHQLTGLWFFPLS*WCWRSL
Trigger: CAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAA...CCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCCAAAGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR CCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCTGGGCATCCATGAGGTaGAGGGGAGGTGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLWASMR*RGGAPA
Trigger: AGCAGGTGCACCTCCCCTCCACCTCATGGATGCCCA...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GCATCCATGAGGTGGAGGGGAGGTGCACCTGCTCCCGGTCATCCTGCATCTGCACACGGATCCATAGGCTaGAGTAAACACGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ASMRWRGGAPAPGHPASAHGSIG*SKHGGL
Trigger: AAGACCTCCGTGTTTACTCCAGCCTATGGATCCGTG...TGCAGATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTCATGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCCAAGAGCTGGCTGTaGGAATCATGGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGAKSWL*ESWCSG
Trigger: GCCTGAGCACCATGATTCCCACAGCCAGCTCTTGGC...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GGCTTCCAAGCTATGCTCTTGATGGGCACCCGTAAGGAGCTTCTACATGCATTACTGGCCCCTCAGGCCTaGGTCGGCTTCCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GFQAMLLMGTRKELLHALLAPQA*VGFLWV
Trigger: CACCCACAGGAAGCCGACCCAGGCCTGAGGGGCCAG...TAATGCATGTAGAAGCTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GCCCTGACGCAGTTCCGCACAGCATGGTGGCTTCCAAGCTATGCTCTTGATGGGGGCCTGGAAGATTCTTaGGGCCCTCCTGATGCTAAG +
Preference number: 4 (lower is better)
Translates to: ALTQFRTAWWLPSYALDGGLEDS*GPPDAK
Trigger: CTTAGCATCAGGAGGGCCCCAAGAATCTTCCAGGCC...CCCATCAAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAACTGCGTCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTGGCCAGGAGTCCCCTTTGGGAGAGTGTaGAGCTCCTGGAGACATCAA +
Preference number: 4 (lower is better)
Translates to: GRVWSSWRHQLTGLWPGVPFGRV*SSWRHQ
Trigger: TTGATGTCTCCAGGAGCTCCACACTCTCCCAAAGGG...GACTCCTGGCCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR TCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGTCACTGATGGGCACGTaGGAACTCGGCAGACAGTCT +
Preference number: 4 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAESLMGT*ELGRQS
Trigger: AGACTGTCTGCCGAGTTCTCACGTGCCCATCAGTGA...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TCACTCCCAGGAGCTTTGCCGGTTCGTTGCTCAGCTGATCTCTTGACCCTTCCACAATGTGCAAGCAGATaGAGCCTAAGCCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLPGALPVRCSADLLTLPQCASR*SLSRRG
Trigger: GCCCCTGCGGCTTAGGCTTCATCTGCTTGCACATTG...TGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GCCCTGACGCAGTTCCGCACAGCATGGTGGCTTCCAAGCTATGCTCTTGATGGGGTGAACGATGTAGAGTaGGAACTCACTGGGGCCATC +
Preference number: 4 (lower is better)
Translates to: ALTQFRTAWWLPSYALDGVNDVE*ELTGAI
Trigger: GATGGCCCCAGTGAGTTCGCACTCTACATCGTTCAC...CCCATCAAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAACTGCGTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp TCACTCCCAGGAGCTTTGCCGGTTCGTTGCTCAGCTGATCTCTTGACCCTTCCACACTCCCAGGAGCTTTaGCGGTTCGTTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SLPGALPVRCSADLLTLPHSQEL*RFVAQL
Trigger: CAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTG...TGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp CTTGGCCCCTGGGCTGTGATGTTCCCGTTCTGGGGCGATGGCTCCTTTAGAGGGAGTCCCTTCTTCTGGTaGTCTACAAGCACAGATGTG +
Preference number: 4 (lower is better)
Translates to: LGPWAVMFPFWGDGSFRGSPFFW*STSTDV
Trigger: CACATCTGTGCTTGTAGAGCACCAGAAGAAGGGACT...CCCTCTAAAGGAGCCATCGCCCCAGAACGGGAACATCACAGCCCAGGGGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATCGGGGGCGCGGCACTTaGGCCTCCTCTGGCTCATGC +
Preference number: 4 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNRGRGT*ASSGSC
Trigger: GCATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCG...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GAGCCCTTTGGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTGGCCATCAGGAAGATCCTaGCGATCTTCTCACATGGCC +
Preference number: 4 (lower is better)
Translates to: EPFGRVWSSWRHQLTGLWPSGRS*RSSHMA
Trigger: GGCCATGTGAGAAGATCGCCAGGATCTTCCTGATGG...CCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCCAAAGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR CCA 90 bp TTTGGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTGGCCAGGATTTCCCCTAAGCTGCTaGTGCTGGCGGTCACTGATG +
Preference number: 4 (lower is better)
Translates to: FGRVWSSWRHQLTGLWPGFPLSC*CWRSLM
Trigger: CATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAA...TCCTGGCCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR TCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGTGGGGCAGCGTGATATaGGGGCAGACAAGAATCTCA +
Preference number: 4 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAEWGSVI*GQTRIS
Trigger: TGAGATTCTTGTCTGCCCTCATATCACGCTGCCCCA...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCATTATGGGGTTGAGGTaGGCTGAATTTGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PLASCVPGPGLLLAGRCIIMGLR*AEFAAF
Trigger: AAAAGCTGCAAATTCAGCTCACCTCAACCCCATAAT...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GCCCTGACGCAGTTCCGCACAGCATGGTGGCTTCCAAGCTATGCTCTTGATGGGTCAGCTGGAAGCTCTTaGCCTCATGGTAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: ALTQFRTAWWLPSYALDGSAGSS*PHGSSC
Trigger: ACAACTGCTACCATGAGGGCAAGAGCTTCCAGCTGA...CCCATCAAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAACTGCGTCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCGTGTACACCTGCCACTaGTGGGGACTTTGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLVYTCH*WGLWKR
Trigger: CCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTACAC...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GCCCTGACGCAGTTCCGCACAGCATGGTGGCTTCCAAGCTATGCTCTTGATGGGCTGTGGGAATCATGGTaGTCAGGCTTCAGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: ALTQFRTAWWLPSYALDGLWESW*SGFREV
Trigger: TACCTCTCTGAAGCCTGAGCACCATGATTCCCACAG...CCCATCAAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAACTGCGTCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp TCACTCCCAGGAGCTTTGCCGGTTCGTTGCTCAGCTGATCTCTTGACCCTTCCATCGGCTTCCTGTGGGTaGTCATCTTGGAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SLPGALPVRCSADLLTLPSASCG*SSWSQE
Trigger: CTCTTGGCTCCAAGATGAGCACCCACAGGAAGCCGA...TGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATAAGCACTGCTCTCCAGTaGAGGAGAGGCATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSRGHCGKVMAESRLDLISTALQ*RRGMVW
Trigger: CCACACCATGCCTCTCCTGCACTGGAGAGCAGTGCT...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTTCCTGCTGTGACATTTaGCCTGACGCAGTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGSCCDI*PDAVPH
Trigger: GTGCGGAACTGCGTCAGGGCAAATGTCACAGCAGGA...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGGGTTGGGGAAATCCTaGTGTGACATTTGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGGLGKS*CDICPD
Trigger: GTCAGGGCAAATGTCACAGCAGGATTTCCCCAACCC...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCCACTGGCTGAATGCTTaGCCCCTGGGCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLHWLNA*PLGCDV
Trigger: AACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTG...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCAAAGTGAGATACTTGTaGCCTTATTCCTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: PLASCVPGPGLLLAGRCIKVRYL*PYSWSH
Trigger: GTGAGACCAGGAATAAGGCCACAAGTATCTCACTTT...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp ATAGGACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTGGCGGTCACTGATGCAACTGACAGGGCTCTaGCCAGGAGTCCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: IGPKFFFPLSCWCWRSLMQLTGL*PGVLGR
Trigger: CCTCCCAAGGACTCCTGGCCAGAGCCCTGTCAGTTG...CATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR CCA 90 bp ATAGGACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTGGCGGTCACTGATGCTCCCTGTGCTAGGCTaGGAGCCCTTTGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: IGPKFFFPLSCWCWRSLMLPVLG*EPFGRV
Trigger: CACTCTCCCAAAGGGCTCCCAGCCTAGCACAGGGAG...CATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR CCA 90 bp ACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTGGCGGTCACTGATGGGAGACTAAGCTGCTGGTGCTaGCGGTCACTGATGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TQILLSPKLLVLAVTDGRLSCWC*RSLMGE
Trigger: CTCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAG...TCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR CCA 90 bp GCTGTCTGTGGAACTCTCAGCCTTGTGCACTGGCTGAATGCTTGGCCCCTGGGCCAGAGTCCCTTCTTCTaGTGCTCTACAAGCACAGAT +
Preference number: 4 (lower is better)
Translates to: AVCGTLSLVHWLNAWPLGQSPFF*CSTSTD
Trigger: ATCTGTGCTTGTAGAGCACCAGAAGAAGGGACTCTG...GCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483709.6
3UTR CAA 72 bp CCAGGAGCTTTGCCGGTTCGTTGCTCAGCTGATCTCTaGACCCTTCCAGTGTCTGGCCTTCTTCTCCTGATG +
Preference number: 4 (lower is better)
Translates to: PGALPVRCSADL*TLPVSGLLLLM
Trigger: CATCAGGAGAAGAAGGCCAGACACTGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGAAGAGCTCCGACTTCTaGATGGACTTGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGKSSDF*MDLLSL
Trigger: CAGTGACAGCAAGTCCATTCAGAAGTCGGAGCTCTT...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATAGCGAGGCTCACAGGGTaGTATTGGAGGCTTAGAAGC +
Preference number: 4 (lower is better)
Translates to: RSRGHCGKVMAESRLDLIARLTG*YWRLRS
Trigger: GCTTCTAAGCCTCCAATATCACCCTGTGAGCCTCGC...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCGCTGCTGCTGGGCATTaGGCGGGCAGCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSAAAAGH*AGSTLS
Trigger: TGAGAGGGTGCTGCCCGCTCAATGCCCAGCAGCAGC...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCGGTTCGTTGCTCAGCTaGTCTCTTGACCCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLGSLLS*SLDPSS
Trigger: ACTGGAAGGGTCAAGAGATCAGCTGAGCAACGAACC...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GCCCTGACGCAGTTCCGCACAGCATGGTGGCTTCCAAGCTATGCTCTTGATGGGTTCTCACATGGCCCATaGAGGATTCTGGAAATCAGC +
Preference number: 4 (lower is better)
Translates to: ALTQFRTAWWLPSYALDGFSHGP*RILEIS
Trigger: GCTGATTTCCAGAATCCTGCATGGGCCATGTGAGAA...CCCATCAAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAACTGCGTCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGCTAGATCTCATACCTaGTGGCAGGCCCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGARSHT*WQALLF
Trigger: GAAAAGCAGGGCCTGCCAGCAGGTATGAGATCTAGC...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp TGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCAACAGGGATGGGGCTGAGCACTaGCTTCCAGAGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CKPLWFFPLNLPSTDLNRDGAEH*LPELLL
Trigger: CAGCAGCAGCTCTGGAAGGCAGTGCTCAGCCCCATC...CCTGTTGAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGCACGGATCCATAGGCTaGAGTAAACACGGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGHGSIG*SKHGGL
Trigger: AAGACCTCCGTGTTTACTCCAGCCTATGGATCCGTG...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATATGTGGGTGCTCATCTTaGAGCCAAGAGCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSRGHCGKVMAESRLDLICGCSS*SQELAV
Trigger: CACAGCCAGCTCTTGGCTCCAAGATGAGCACCCACA...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCAACAGGGACCCACAGGGGCTCTaGGACAGGCAATGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: CKPLWFFPLNLPSTDLNRDPQGL*DRQCAS
Trigger: GCTTGCACATTGCCTGTCCCAGAGCCCCTGTGGGTC...CCTGTTGAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCTGGCAAGGTGATGGCTaGAAGCAGGCTAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLWQGDG*KQARSH
Trigger: ATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCA...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TCACTCCCAGGAGCTTTGCCGGTTCGTTGCTCAGCTGATCTCTTGACCCTTCCATTCTGTGACTCGGGGTaGCTCTATTGCTCATCATCC +
Preference number: 4 (lower is better)
Translates to: SLPGALPVRCSADLLTLPFCDSG*LYCSSS
Trigger: GGATGATGAGCAATAGAGTCACCCCGAGTCACAGAA...TGGAAGGGTCAAGAGATCAGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGCCTCTCAATGCCATGTaGACCCTCCTCAATGTGATT +
Preference number: 4 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGPLNAM*TLLNVI
Trigger: AATCACATTGAGGAGGGTCCACATGGCATTGAGAGG...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCCCAGCCTCTAACGTTTaGAATTATGGGGTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLPASNV*NYGVEV
Trigger: CACCTCAACCCCATAATTTCAAACGTTAGAGGCTGG...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCACTGCCTTCCAGAGCTaGTGCTGGGCATTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSATAFQS*CWALSG
Trigger: CCCGCTCAATGCCCAGCAGCAGCTCTGGAAGGCAGT...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GGCTTCCAAGCTATGCTCTTGATGGGCACCCGTAAGGAGCTTCTACATGCATTAGCACCTAAGGATCTATaGTGCCAGAGGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GFQAMLLMGTRKELLHALAPKDL*CQRRAE
Trigger: CTCTGCCCTCCTCTGGCAGCATAGATCCTTAGGTGC...TAATGCATGTAGAAGCTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCCACTTGGGCCTCCTCTaGCTCATGCAACTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLHLGLL*LMQLAS
Trigger: CGACGCCAGTTGCATGAGCCAGAGGAGGCCCAAGTG...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp ATAGGACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTGGCGGTCACTGATGGGCGATCTTCTCACATaGCCCATGCAGGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: IGPKFFFPLSCWCWRSLMGDLLT*PMQDSG
Trigger: TCCAGAATCCTGCATGGGCCATGTGAGAAGATCGCC...CATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR CCA 90 bp GGCTTCCAAGCTATGCTCTTGATGGGCACCCGTAAGGAGCTTCTACATGCATTACGATTCGTCAGGCGGTaGCCATCAGTCAATGTGACC +
Preference number: 4 (lower is better)
Translates to: GFQAMLLMGTRKELLHALRFVRR*PSVNVT
Trigger: GGTCACATTGACTGATGGCCACCGCCTGACGAATCG...TAATGCATGTAGAAGCTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCGAGTCGACAAAACAGTaGGCAGGCCTCCCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLESTKQ*AGLPCS
Trigger: GCTGCAGGGGAGGCCTGCCCACTGTTTTGTCGACTC...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATCGCCTGCGTGTTCCATaGCAGCCTCTCCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDRLRVP*QPLLRL
Trigger: GAGCCTGAGGAGAGGCTGCCATGGAACACGCAGGCG...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCTGGCCTGCTCCTAGCTaGCAGGTGCATCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSAWPAPS*QVHLGL
Trigger: CAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCA...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp ACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTGGCGGTCACTGATGGGAGATTCTCACATGGCCCATaGAGGATTCTGGAAATCAGC +
Preference number: 4 (lower is better)
Translates to: TQILLSPKLLVLAVTDGRFSHGP*RILEIS
Trigger: GCTGATTTCCAGAATCCTGCATGGGCCATGTGAGAA...TCTCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR GCA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGAATGACCGTGTTTCTTaGAGCAAGCTCCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGNDRVS*SKLLVR
Trigger: TCTTACAAGGAGCTTGCTGCAAGAAACACGGTCATT...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp GGCTTCCAAGCTATGCTCTTGATGGGCACCCGTAAGGAGCTTCTACATGCATTACTTCTTAGCCAACTCTaGCTTGGCCTCCACCTCACT +
Preference number: 4 (lower is better)
Translates to: GFQAMLLMGTRKELLHALLLSQL*LGLHLT
Trigger: AGTGAGGTGGAGGCCAAGGCAGAGTTGGCTAAGAAG...TAATGCATGTAGAAGCTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCGCCCCGAGCTGTCTGTaGAACTCTCAGCCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSAAPSCL*NSQPCA
Trigger: TGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGGC...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATTCTGGCTCATGCAACTaGCGTCGCTCTTGGTCCGCA +
Preference number: 4 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNSGSCN*RRSWSA
Trigger: TGCGGACCAAGAGCGACGCCAGTTGCATGAGCCAGA...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp ACAGGCCATGGTTTTATAGGACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCGCCCATGCAGGATTCTaGAAATCAGCGGGTACTCGC +
Preference number: 4 (lower is better)
Translates to: TGHGFIGPKFFFPLSCWCAHAGF*KSAGTR
Trigger: GCGAGTACCCGCTGATTTCCAGAATCCTGCATGGGC...GCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCCTATAAAACCATGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR CCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCTGGTGTGGACAGGGCTaGCCACACAGATCTGACCCA +
Preference number: 4 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLWCGQG*PHRSDP
Trigger: TGGGTCAGATCTGTGTGGCCAGCCCTGTCCACACCA...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCAACAGGCAGTTCCGCACAGCATaGTGGCTTCCAAGCTATGCT +
Preference number: 4 (lower is better)
Translates to: CKPLWFFPLNLPSTDLNRQFRTA*WLPSYA
Trigger: AGCATAGCTTGGAAGCCACCATGCTGTGCGGAACTG...CCTGTTGAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATTCCCACCTGAGCCCCTaGCCTGGAAGATTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDSHLSP*PGRFLG
Trigger: CCCCAAGAATCTTCCAGGCCAGGGGCTCAGGTGGGA...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GGCTTCCAAGCTATGCTCTTGATGGGCACCCGTAAGGAGCTTCTACATGCATTAACCAACCAAACAGGCTaGTACTTAGGGAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GFQAMLLMGTRKELLHALTNQTG*YLGRVS
Trigger: GGAGACCCTCCCTAAGTACCAGCCTGTTTGGTTGGT...TAATGCATGTAGAAGCTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GAGCCCTTTGGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTGGGAAAAGGACAGGCCATaGTTTTATAGGACCCAAATT +
Preference number: 4 (lower is better)
Translates to: EPFGRVWSSWRHQLTGLWEKDRP*FYRTQI
Trigger: AATTTGGGTCCTATAAAACCATGGCCTGTCCTTTTC...CCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCCAAAGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
3UTR CAA 72 bp AGTTCCGCACAGCATGGTGGCTTCCAAGCTATGCTCTaGATGGGCACCCGTAAGGAGCTTCTACATGCATTA +
Preference number: 4 (lower is better)
Translates to: SSAQHGGFQAML*MGTRKELLHAL
Trigger: TAATGCATGTAGAAGCTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCTCCAAGCTATGCTCTTaGTGGGCACCCGTAAGGAGC +
Preference number: 4 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLSKLCS*WAPVRS
Trigger: GCTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGA...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTTTGAAATTATGGGGTTaGGGTGAGCTGAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGLKLWG*GELNLQ
Trigger: CTGCAAATTCAGCTCACCTCAACCCCATAATTTCAA...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCGCAGCACCCTCTCAATaGCATGTGGACCCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLAAPSQ*HVDPPQ
Trigger: TTGAGGAGGGTCCACATGGCATTGAGAGGGTGCTGC...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp TGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCAACAGGGAGTTGTGGCTCTTCTaGCAAACATGGCCACACATC +
Preference number: 4 (lower is better)
Translates to: CKPLWFFPLNLPSTDLNRELWLF*QTWPHI
Trigger: GATGTGTGGCCATGTTTGGCAGAAGAGCCACAACTC...CCTGTTGAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATTGGACTTGCTGTCACTaGTGGGCACGTGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDWTCCH*WARENS
Trigger: CGAGTTCTCACGTGCCCATCAGTGACAGCAAGTCCA...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCTCCTGTGGGGCAGCGTaGTATGAGGGCAGACAAGAA +
Preference number: 4 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLSCGAA*YEGRQE
Trigger: TTCTTGTCTGCCCTCATATCACGCTGCCCCACAGGA...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCAACAGGGATGCTAAGATTCTGTaGCTCGGGGTGACTCTATTG +
Preference number: 4 (lower is better)
Translates to: CKPLWFFPLNLPSTDLNRDAKIL*LGVTLL
Trigger: CAATAGAGTCACCCCGAGTCACAGAATCTTAGCATC...CCTGTTGAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGACTGATGTAAACTGTTaGATAGTTTCGCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAETDVNC*IVSQRL
Trigger: AAGCCTTTGCGAAACTATGCAACAGTTTACATCAGT...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCTTAGGGAGGGTCTCCTaGTCCACTGGCTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLLGRVS*STGFLC
Trigger: ACACAGGAAGCCAGTGGAGCAGGAGACCCTCCCTAA...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCTCACGGTGTCTCAGCTaGAAGCTCTTGCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLSRCLS*KLLPSW
Trigger: CCATGAGGGCAAGAGCTTCCAGCTGAGACACCGTGA...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCGTGATGTTCCCGTTCTaGGGCGATGGCTCCTTTAGA +
Preference number: 4 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSAVMFPF*GDGSFR
Trigger: TCTAAAGGAGCCATCGCCCCAGAACGGGAACATCAC...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCGCCCATGCAGGATTCTaGAAATCAGCGGGTACTCGC +
Preference number: 4 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLAHAGF*KSAGTR
Trigger: GCGAGTACCCGCTGATTTCCAGAATCCTGCATGGGC...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATGGCGATCTTCTCACATaGCCCATGCAGGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNGDLLT*PMQDSG
Trigger: TCCAGAATCCTGCATGGGCCATGTGAGAAGATCGCC...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTCTTTGCAAGCCTTTGTaGTTCTTCCCTTTAAATCTG +
Preference number: 4 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGLCKPL*FFPLNL
Trigger: CAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAG...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATTTGTCATGGTGCTGTTaGCCCTCACATTGGTCACGG +
Preference number: 4 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDLSWCC*PSHWSR
Trigger: CCGTGACCAATGTGAGGGTCAACAGCACCATGACAA...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATTCACTCAGTTACAGCTaGACAATGGGACAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNSLSYS*TMGQEL
Trigger: CAGCTCCTGTCCCATTGTTCAGCTGTAACTGAGTGA...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATCTGGGACAGGCAATGTaGAAGCAGATGAAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNLGQAM*KQMKPK
Trigger: CTTAGGCTTCATCTGCTTGCACATTGCCTGTCCCAG...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCCCATCAGGAAGATCCTaGCGATCTTCTCACATGGCC +
Preference number: 4 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLPSGRS*RSSHMA
Trigger: GGCCATGTGAGAAGATCGCCAGGATCTTCCTGATGG...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATGTCAGACGCAGGGCTTaGAACTTCATGGTCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNVRRRA*NFMVSL
Trigger: CAAACTGACCATGAAGTTCCAAGCCCTGCGTCTGAC...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATAGCCGGGGGTCAGGGTaGATGCACAGAAAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDSRGSG*MHRKQK
Trigger: TTTTTGCTTTCTGTGCATCCACCCTGACCCCCGGCT...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp GGCTTCCAAGCTATGCTCTTGATGGGCACCCGTAAGGAGCTTCTACATGCATTAGGGAGTACAATTACCTaGGAGCTCCTGTTTGATTTG +
Preference number: 4 (lower is better)
Translates to: GFQAMLLMGTRKELLHALGSTIT*ELLFDL
Trigger: CAAATCAAACAGGAGCTCCCAGGTAATTGTACTCCC...TAATGCATGTAGAAGCTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCAACAGGAGTATTGAAAGTCATTaGAAGTCATCCCCACCCACT +
Preference number: 4 (lower is better)
Translates to: CKPLWFFPLNLPSTDLNRSIESH*KSSPPT
Trigger: AGTGGGTGGGGATGACTTTCAATGACTTTCAATACT...CCTGTTGAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATCTGGGAGCTCCTGTTTaGTTTGTTTTGTACCCTCTC +
Preference number: 4 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNLGAPV*FVLYPL
Trigger: GAGAGGGTACAAAACAAATCAAACAGGAGCTCCCAG...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCTTCCGCACAGCATGGTaGCTTCCAAGCTATGCTCTT +
Preference number: 4 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLFRTAW*LPSYAL
Trigger: AAGAGCATAGCTTGGAAGCCACCATGCTGTGCGGAA...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CAA 72 bp AATAGCTTGGGAGTACAATTACCTGGGAGCTCCTGTTaGATTTGTTTTGTACCCTCTCCTAGGCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NSLGVQLPGSSC*ICFVPSPRPCF
Trigger: GAAGCAGGGCCTAGGAGAGGGTACAAAACAAATCAAACAGGAGCTCCCAGGTAATTGTACTCCCAAGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCACAGCACACCTTTATTaGGCACCTAAGGATCTATGC +
Preference number: 4 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLTAHLY*APKDLC
Trigger: GCATAGATCCTTAGGTGCTCAATAAAGGTGTGCTGT...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCAGCCTCTCCTATCTTTaGAAGCCTTTGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLSLSYL*KPLWFF
Trigger: GAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCT...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR GCA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCAACTCCTCAGCTGATTaGAGAAGTGTACCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSANSSAD*RSVPFP
Trigger: GGGAAAAGGTACACTTCTGCAATCAGCTGAGGAGTT...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCCTCAATGTGATTGAATaGCCGTGTTTCTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLLNVIE*PCFLQQ
Trigger: TTGCTGCAAGAAACACGGTCATTCAATCACATTGAG...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATTGTGAACTCCTCAGCTaGTTGCAGAAGTGTACCTTT +
Preference number: 4 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDCELLS*LQKCTF
Trigger: AAAGGTACACTTCTGCAATCAGCTGAGGAGTTCACA...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CAA 72 bp CTTCTACATGCATTAGAGATGGAGCCTCTCCTATCTTaGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCC +
Preference number: 4 (lower is better)
Translates to: LLHALEMEPLLS*QAFVVLPFKSA
Trigger: GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCATCTCTAATGCATGTAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
3UTR CAA 72 bp AGGAGCTGTCCTCCACCTGAGATTGTAAATAATAGCTaGGGAGTACAATTACCTGGGAGCTCCTGTTTGATT +
Preference number: 4 (lower is better)
Translates to: RSCPPPEIVNNS*GVQLPGSSCLI
Trigger: AATCAAACAGGAGCTCCCAGGTAATTGTACTCCCAAGCTATTATTTACAATCTCAGGTGGAGGACAGCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCTTTCTGCAGAGAAAGTaGGATACTTGTGGCCTTATT +
Preference number: 4 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLFLQRK*DTCGLI
Trigger: AATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAA...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR TCA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCTTTTCAGATTGCCTCTaGACAGCAAATATGATGTTG +
Preference number: 4 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLFSDCL*TANMML
Trigger: CAACATCATATTTGCTGTTCAGAGGCAATCTGAAAA...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CCA 90 bp CAGCTGATTGCAGAAGTGTACCTTTTCCCTTTTTCTGAGCCACTTGCTAGTGATAAATTGTTCAGTATCTaGGGAATTCAAAGCCCTTTC +
Preference number: 4 (lower is better)
Translates to: QLIAEVYLFPFSEPLASDKLFSI*GIQSPF
Trigger: GAAAGGGCTTTGAATTCCCCAGATACTGAACAATTT...ATCACTAGCAAGTGGCTCAGAAAAAGGGAAAAGGTACACTTCTGCAATCAGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS GCA 90 bp CAAGCAGGGGACCTCTCTGCCCACACTGCACCTGGGAGGGGGTCCTaGGCCACCAGGTCCTATGGCCACCAGGCCCGGCAGGGTCCCACA +
Preference number: 5 (lower is better)
Translates to: QAGDLSAHTAPGRGS*ATRSYGHQARQGPT
Trigger: TGTGGGACCCTGCCGGGCCTGGTGGCCATAGGACCTGGTGGCGCAGGACCCCCTCCCAGGTGCAGTGTGGGCAGAGAGGTCCCCTGCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 90 bp TGCCCACACTGCACCTGGGAGGGGGTCCTGCGCCACCAGGTCCTATaGCCACCAGGCCCGGCAGGGTCCCACACCCACCAGAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: CPHCTWEGVLRHQVL*PPGPAGSHTHQRRS
Trigger: ACTTCTCCTCTGGTGGGTGTGGGACCCTGCCGGGCCTGGTGGCCATAGGACCTGGTGGCGCAGGACCCCCTCCCAGGTGCAGTGTGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS TCA 90 bp GCCTCCTCCAGGGGCCAGAGGGCAGCTAGGCCGTCTGGGCATCCATaGGGTGGAGGGGAGGTGCACCTGCTCCCGGTCATCCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: ASSRGQRAARPSGHP*GGGEVHLLPVILHL
Trigger: CAGATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTCATGGATGCCCAGACGGCCTAGCTGCCCTCTGGCCCCTGGAGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472561.5
CDS CCA 90 bp TGTCTGCTCATGCCAAGCAGGGGACCTCTCTGCCCACACTGCACCTaGGAGGGGGTCCTGCGCCACCAGGTCCTATGGCCACCAGGCCCG +
Preference number: 5 (lower is better)
Translates to: CLLMPSRGPLCPHCT*EGVLRHQVLWPPGP
Trigger: CGGGCCTGGTGGCCATAGGACCTGGTGGCGCAGGACCCCCTCCCAGGTGCAGTGTGGGCAGAGAGGTCCCCTGCTTGGCATGAGCAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 90 bp GTCATCGCGCAGTCCAGAAGCCACTGCATGTGTCGTGTCCTCGCTTaGACCGGAGCTGCGCCCGCAGCGCCTGCTGACCCCAGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VIAQSRSHCMCRVLA*TGAAPAAPADPRLQ
Trigger: CTGAAGCCTGGGGTCAGCAGGCGCTGCGGGCGCAGCTCCGGTGCAAGCGAGGACACGACACATGCAGTGGCTTCTGGACTGCGCGATGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 90 bp GTGTCAGGCAGGGGCCACCTAGAAGGGCCCAACCTCCAGGCCTCTTaGCAGGATGAGCCCCAGGCCAGGGTAGCTAGTGCTGGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VSGRGHLEGPNLQAS*QDEPQARVASAGLE
Trigger: CTCCAGCCCAGCACTAGCTACCCTGGCCTGGGGCTCATCCTGCCAAGAGGCCTGGAGGTTGGGCCCTTCTAGGTGGCCCCTGCCTGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS-3UTR CAA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCAGCTGCTGCTGGGCATaGAGCGGGCAGCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: VPGPGLLLAGRCILACDASCCWA*SGQHPL
Trigger: GAGAGGGTGCTGCCCGCTCAATGCCCAGCAGCAGCT...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS CCA 90 bp AGCCAGCTGCTGGCCGGCAGGCACGTCCACACCGCGGTGAAGAAGTaGTTCCAGGGACGCACAGCCTGTCTGCTCATGCCAAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: SQLLAGRHVHTAVKK*FQGRTACLLMPSRG
Trigger: TCCCCTGCTTGGCATGAGCAGACAGGCTGTGCGTCCCTGGAACCACTTCTTCACCGCGGTGTGGACGTGCCTGCCGGCCAGCAGCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 90 bp GCTGTCGGGAGATCTGGCACCCTAGAGCCCTGTGGTCACGTGCACTaGGGCAGATGGGGACGTGAGGGCCATTCCTGGACTGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: AVGRSGTLEPCGHVH*GRWGREGHSWTGGW
Trigger: CCAGCCTCCAGTCCAGGAATGGCCCTCACGTCCCCATCTGCCCCAGTGCACGTGACCACAGGGCTCTAGGGTGCCAGATCTCCCGACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS TCA 90 bp CTTGCCAGCAAGGTGGAGAGGGCAGCTAGGCCGTCTGGGCATCCATaGGGTGGAGGGGAGGTGCACCTGCTCCCGGTCATCCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: LASKVERAARPSGHP*GGGEVHLLPVILHL
Trigger: CAGATGCAGGATGACCGGGAGCAGGTGCACCTCCCCTCCACCTCATGGATGCCCAGACGGCCTAGCTGCCCTCTCCACCTTGCTGGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428466.1
CDS TCA 90 bp CCACAGGAAGCCAGCTGCTGGCCGGCAGGCACGTCCACACCGCGGTaGAGAAGTGGTTCCAGGGACGCACAGCCTGTCTGCTCATGCCAA +
Preference number: 5 (lower is better)
Translates to: PQEASCWPAGTSTPR*RSGSRDAQPVCSCQ
Trigger: TTGGCATGAGCAGACAGGCTGTGCGTCCCTGGAACCACTTCTTCACCGCGGTGTGGACGTGCCTGCCGGCCAGCAGCTGGCTTCCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 90 bp CCGGCCGGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCACTGCTaGGGACTTTGGAAGAGGCAGGTGTTGGCCAGTTACTTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PAGASNQGSVYTCHC*GLWKRQVLASYLAS
Trigger: GGAGGCCAAGTAACTGGCCAACACCTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCCGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000472561.5
ENST00000489171.5
CDS CCA 90 bp ATGGCCACCAGGCCCGGCAGGGTCCCACACCCACCAGAGGAGAAGTaGGCACTCTCTGTCCTAGCTGTGTCTCAGCCTCACCCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: MATRPGRVPHPPEEK*ALSVLAVSQPHPSP
Trigger: GGGAGAAGGGTGAGGCTGAGACACAGCTAGGACAGAGAGTGCCCACTTCTCCTCTGGTGGGTGTGGGACCCTGCCGGGCCTGGTGGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 90 bp ATGTGCTCAGCTCATGCCTGGCCAGGGGCACAGCGCAGAACACAGTaGCTGAGTCAGGTGTCCCACAGGAAGCCAGCTGCTGGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: MCSAHAWPGAQRRTQ*LSQVSHRKPAAGRQ
Trigger: CTGCCGGCCAGCAGCTGGCTTCCTGTGGGACACCTGACTCAGCCACTGTGTTCTGCGCTGTGCCCCTGGCCAGGCATGAGCTGAGCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 90 bp CAGGGGTCTGGGCAGCTTGCGGGCTCCGCTTACCCGAGCTGTCTGTaGAACTCTCAGCCTTGTGCACTGGCTGAATGCTTGGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: QGSGQLAGSAYPSCL*NSQPCALAECLAPG
Trigger: CCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGTAAGCGGAGCCCGCAAGCTGCCCAGACCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 90 bp CATGGGGGTCGGGCTGAGGAGGAGGCGAGACTCACGGGACAGGCCTaGGTCTGGTCCAGGATGTCCAGGGTGCCGACACTTTCACTATCA +
Preference number: 5 (lower is better)
Translates to: HGGRAEEEARLTGQA*VWSRMSRVPTLSLS
Trigger: TGATAGTGAAAGTGTCGGCACCCTGGACATCCTGGACCAGACGCAGGCCTGTCCCGTGAGTCTCGCCTCCTCCTCAGCCCGACCCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 90 bp AGGGTGGGTGATGCTGACAGAGCAACTGCCTGCTGTCGGGAGATCTaGCACCCTAGAGCCCTGTGGTCACGTGCACTGGGGCAGATGGGG +
Preference number: 5 (lower is better)
Translates to: RVGDADRATACCREI*HPRALWSRALGQMG
Trigger: CCCCATCTGCCCCAGTGCACGTGACCACAGGGCTCTAGGGTGCCAGATCTCCCGACAGCAGGCAGTTGCTCTGTCAGCATCACCCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS-3UTR CAA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCAGCCCCCAGGCAATGTaGAGGAGCCCCTCGATGATC +
Preference number: 5 (lower is better)
Translates to: PLASCVPGPGLLLAGRCISPQAM*RSPSMI
Trigger: GATCATCGAGGGGCTCCTCAACATTGCCTGGGGGCT...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp TTCCAGAGCTGCTGCTGGGCATTGAGCGGGCAGCACCCTCTCAATGCCATGTGGCAACTGGCGTCGCTCTaGGTCCGCATCAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: FQSCCWALSGQHPLNAMWQLASL*VRISWG
Trigger: CCCCCAGCTGATGCGGACCAAGAGCGACGCCAGTTG...CCACATGGCATTGAGAGGGTGCTGCCCGCTCAATGCCCAGCAGCAGCTCTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp GCTGTCTGTGGAACTCTCAGCCTTGTGCACTGGCTGAATGCTTGGCCCCTGGGCCAACTGGCGTCGCTCTaGGTCCGCATCAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: AVCGTLSLVHWLNAWPLGQLASL*VRISWG
Trigger: CCCCCAGCTGATGCGGACCAAGAGCGACGCCAGTTG...GCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS-3UTR CAA 90 bp GAAACGCAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTCCGGGGGCGCGGCACTaGGGCCTCCTCTGGCTCATG +
Preference number: 5 (lower is better)
Translates to: ETQAQKRQEVHRHPRDSGPGARH*GLLWLM
Trigger: CATGAGCCAGAGGAGGCCCAAGTGCCGCGCCCCCGG...ACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTGCGTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCTCACTCCCAGGAGCTTaGCCGGTTCGTTGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: VPGPGLLLAGRCILACDASLPGA*PVRCSA
Trigger: AGCTGAGCAACGAACCGGCAAAGCTCCTGGGAGTGA...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS TCA 90 bp GAGCAGCTGCCTACCTTCCCTGTGCCCCCTAGGGATGGGATGCTCTaGACACTCAGGCCTTGCACATCCCTCCTCCTGAGTGGCCCCATC +
Preference number: 5 (lower is better)
Translates to: EQLPTFPVPPRDGML*TLRPCTSLLLSGPI
Trigger: GATGGGGCCACTCAGGAGGAGGGATGTGCAAGGCCTGAGTGTTCAGAGCATCCCATCCCTAGGGGGCACAGGGAAGGTAGGCAGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 90 bp CCTAGAAGTTACTTGCGTCCAGTCATCGCGCAGTCCAGAAGCCACTaGATGTGTCGTGTCCTCGCTTGCACCGGAGCTGCGCCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: PRSYLRPVIAQSRSH*MCRVLACTGAAPAA
Trigger: CGCTGCGGGCGCAGCTCCGGTGCAAGCGAGGACACGACACATGCAGTGGCTTCTGGACTGCGCGATGACTGGACGCAAGTAACTTCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS GCA 90 bp ACAGCACCCTTCTCGCCGGCCAGGCATAACCAGAGGAGACCAGACTaGCATCGCAATGCACCCGGATGGTTCTGCACATGGCCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: TAPFSPARHNQRRPD*HRNAPGWFCTWPWW
Trigger: CCACCAGGGCCATGTGCAGAACCATCCGGGTGCATTGCGATGGCAGTCTGGTCTCCTCTGGTTATGCCTGGCCGGCGAGAAGGGTGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 90 bp GCAGGCACCTGGGTAGGGGTCCAGCAGGTGAAGCCCCTCGTTGGCTaGGGCACAAAGCTGTCCTTCGGAGATTGTGGTTGTGAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: AGTWVGVQQVKPLVG*GTKLSFGDCGCEPS
Trigger: GCTTGGCTCACAACCACAATCTCCGAAGGACAGCTTTGTGCCCCAGCCAACGAGGGGCTTCACCTGCTGGACCCCTACCCAGGTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS CCA 90 bp GGTCGGGCTGAGGAGGAGGCGAGACTCACGGGACAGGCCTGCGTCTaGTCCAGGATGTCCAGGGTGCCGACACTTTCACTATCACAGGTA +
Preference number: 5 (lower is better)
Translates to: GRAEEEARLTGQACV*SRMSRVPTLSLSQV
Trigger: TACCTGTGATAGTGAAAGTGTCGGCACCCTGGACATCCTGGACCAGACGCAGGCCTGTCCCGTGAGTCTCGCCTCCTCCTCAGCCCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS-3UTR CAA 90 bp CTGCTGGTGCTGGCGGTCACTGATGGGAGAGGGAGGGCTGGCGCCTCCCTGTGCTCTTCCACCCTAAATTaGTTCAGCAGCAGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LLVLAVTDGRGRAGASLCSSTLN*FSSRVS
Trigger: GCTCACCCTGCTGCTGAACAAATTTAGGGTGGAAGA...GCACAGGGAGGCGCCAGCCCTCCCTCTCCCATCAGTGACCGCCAGCACCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR CAA 90 bp GTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCTTGGCCTGTGACGCCCTCGGGGTGACTCTATaGCTCATCATCCAGGTCACC +
Preference number: 5 (lower is better)
Translates to: VPGPGLLLAGRCILACDALGVTL*LIIQVT
Trigger: GGTGACCTGGATGATGAGCAATAGAGTCACCCCGAG...GGCGTCACAGGCCAAGATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp GAGCCCTTTGGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTGGCAGGCCTCCCCAGCCTaGGCCCCCACTCACTTCATG +
Preference number: 5 (lower is better)
Translates to: EPFGRVWSSWRHQLTGLWQASPA*APTHFM
Trigger: CATGAAGTGAGTGGGGGCCAAGGCTGGGGAGGCCTG...CCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCCAAAGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS TCA 90 bp GGGATGGGATGCTCTGAACACTCAGGCCTTGCACATCCCTCCTCCTaGGTGGCCCCATCCCCTCAGGAAGGACCATCAGCCACTACGTGC +
Preference number: 5 (lower is better)
Translates to: GMGCSEHSGLAHPSS*VAPSPQEGPSATTC
Trigger: GCACGTAGTGGCTGATGGTCCTTCCTGAGGGGATGGGGCCACTCAGGAGGAGGGATGTGCAAGGCCTGAGTGTTCAGAGCATCCCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 90 bp CAGTGTACACCTGCCACTGCTGGGGACTTTGGAAGAGGCAGGTGTTaGCCAGTTACTTGGCCTCCACCAGCTGCTCCAGGCGCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: QCTPATAGDFGRGRC*PVTWPPPAAPGAAA
Trigger: TGCTGCAGCGCCTGGAGCAGCTGGTGGAGGCCAAGTAACTGGCCAACACCTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000472561.5
ENST00000489171.5
CDS CCA 90 bp GCCAGCAACCAGGGCTCAGTGTACACCTGCCACTGCTGGGGACTTTaGAAGAGGCAGGTGTTGGCCAGTTACTTGGCCTCCACCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ASNQGSVYTCHCWGL*KRQVLASYLASTSC
Trigger: GCAGCTGGTGGAGGCCAAGTAACTGGCCAACACCTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000472561.5
ENST00000489171.5
CDS CCA 90 bp GCTCCGCTTACCCGAGCTGTCTGTGGAACTCTCAGCCTTGTGCACTaGCTGAATGCTTGGCCCCTGGGCTGTGATGTTCCCGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: APLTRAVCGTLSLVH*LNAWPLGCDVPVLG
Trigger: CCCCAGAACGGGAACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGTAAGCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS CCA 90 bp AGATCTGGCACCCTAGAGCCCTGTGGTCACGTGCACTGGGGCAGATaGGGACGTGAGGGCCATTCCTGGACTGGAGGCTGGATATTCCCA +
Preference number: 5 (lower is better)
Translates to: RSGTLEPCGHVHWGR*GREGHSWTGGWIFP
Trigger: TGGGAATATCCAGCCTCCAGTCCAGGAATGGCCCTCACGTCCCCATCTGCCCCAGTGCACGTGACCACAGGGCTCTAGGGTGCCAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS-3UTR CAA 90 bp GCTGTCTGTGGAACTCTCAGCCTTGTGCACTGGCTGAATGCTTGGCCCCTGGGCAGCCCCCAGGCAATGTaGAGGAGCCCCTCGATGATC +
Preference number: 5 (lower is better)
Translates to: AVCGTLSLVHWLNAWPLGSPQAM*RSPSMI
Trigger: GATCATCGAGGGGCTCCTCAACATTGCCTGGGGGCT...GCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS GCA 90 bp CCTCCCTCGGTTTCCCTAGGTCTGCAGGTGACATGGCTTCTCTCCTaGTGCCAACCTGGGGCCCTAATCAACAGAGTCCTCTGCACGCAC +
Preference number: 5 (lower is better)
Translates to: PPSVSLGLQVTWLLS*CQPGALINRVLCTH
Trigger: GTGCGTGCAGAGGACTCTGTTGATTAGGGCCCCAGGTTGGCAGCAGGAGAGAAGCCATGTCACCTGCAGACCTAGGGAAACCGAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS-3UTR CAA 90 bp CCACTGGCTTCCTGTGTGCCAGGACCTGGCCTGCTCCTAGCTGGCAGGTGCATCCGTCAGACGCAGGGCTaGGAACTTCATGGTCAGTTT +
Preference number: 5 (lower is better)
Translates to: PLASCVPGPGLLLAGRCIRQTQG*ELHGQF
Trigger: AAACTGACCATGAAGTTCCAAGCCCTGCGTCTGACG...GATGCACCTGCCAGCTAGGAGCAGGCCAGGTCCTGGCACACAGGAAGCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp CAAGCCCAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGGTCTCACCTCTGTGTaGGGGCTGAGCTGTGCGAGG +
Preference number: 5 (lower is better)
Translates to: QAQKRQEVHRHPRDSGDGGLTSV*GLSCAR
Trigger: CCTCGCACAGCTCAGCCCCAACACAGAGGTGAGACC...CCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTGGGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp GGACCCAAATTCTTCTTTCCCCTAAGCTGCTGGTGCTGGCGGTCACTGATGGGATCTGGCCAGGAGTCCTaGGGAGGCCCCGTCACCCAA +
Preference number: 5 (lower is better)
Translates to: GPKFFFPLSCWCWRSLMGSGQES*GGPVTQ
Trigger: TTGGGTGACGGGGCCTCCCAAGGACTCCTGGCCAGA...TCCCATCAGTGACCGCCAGCACCAGCAGCTTAGGGGAAAGAAGAATTTGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS GCA 90 bp CAGGTGTTGGCCAGTTACTTGGCCTCCACCAGCTGCTCCAGGCGCTaGAGCATCGTCAGACGCAGGGCTTGGAACTTCATGGTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: QVLASYLASTSCSRR*SIVRRRAWNFMVSL
Trigger: CAAACTGACCATGAAGTTCCAAGCCCTGCGTCTGACGATGCTGCAGCGCCTGGAGCAGCTGGTGGAGGCCAAGTAACTGGCCAACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000472561.5
ENST00000489171.5
CDS GCA 90 bp CCCTCGGTTTCCCTAGGTCTGCAGGTGACATGGCTTCTCTCCTGCTaGCAACCTGGGGCCCTAATCAACAGAGTCCTCTGCACGCACCTT +
Preference number: 5 (lower is better)
Translates to: PSVSLGLQVTWLLSC*QPGALINRVLCTHL
Trigger: AAGGTGCGTGCAGAGGACTCTGTTGATTAGGGCCCCAGGTTGGCAGCAGGAGAGAAGCCATGTCACCTGCAGACCTAGGGAAACCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS-3UTR CAA 90 bp CCAGGGGCCCCGAGCTGTCTGTGGAACTCTCAGCCTTGTGCACTGGCTGAATGCGTTGTCATGGTGCTGTaGACCCTCACATTGGTCACG +
Preference number: 5 (lower is better)
Translates to: PGAPSCLWNSQPCALAECVVMVL*TLTLVT
Trigger: CGTGACCAATGTGAGGGTCAACAGCACCATGACAAC...GCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS TCA 90 bp GTTCTGGGGCGATGGCTCCTTTCTGAAAACAGACAACTGCAGGGCTaGGATGGCTGCCGGCAGAGAAAGGGAGCTCAGGCCAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: VLGRWLLSENRQLQG*DGCRQRKGAQAKEK
Trigger: CTTCTCCTTGGCCTGAGCTCCCTTTCTCTGCCGGCAGCCATCTCAGCCCTGCAGTTGTCTGTTTTCAGAAAGGAGCCATCGCCCCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427758.5
ENST00000471941.5
CDS TCA 90 bp ACCAGCAGCCCCTGGGGTAGGACACAGGCGGGAAGCAAGGCAGGCTaGGGTGAGGCCTGGATTTCAAACCAAGAGAGTCAGTCTGAAACA +
Preference number: 5 (lower is better)
Translates to: TSSPWGRTQAGSKAG*GEAWISNQESQSET
Trigger: TGTTTCAGACTGACTCTCTTGGTTTGAAATCCAGGCCTCACCTCAGCCTGCCTTGCTTCCCGCCTGTGTCCTACCCCAGGGGCTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 90 bp ATGTTCCCGTTCTGGGGCGATGGCTCCTTTCTGAAAACAGACAACTaGAGGGCTGAGATGGCTGCCGGCAGAGAAAGGGAGCTCAGGCCA +
Preference number: 5 (lower is better)
Translates to: MFPFWGDGSFLKTDN*RAEMAAGRERELRP
Trigger: TGGCCTGAGCTCCCTTTCTCTGCCGGCAGCCATCTCAGCCCTGCAGTTGTCTGTTTTCAGAAAGGAGCCATCGCCCCAGAACGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427758.5
ENST00000471941.5
CDS GCA 90 bp TGTGTGCCTCAGAATTCGCTGAGTGACTGGGGACACCTAGGTATGTaGTGGGGCTGTCAGGGTGGTGGGTGCTGTCACAGCATGGGTTTC +
Preference number: 5 (lower is better)
Translates to: CVPQNSLSDWGHLGM*WGCQGGGCCHSMGF
Trigger: GAAACCCATGCTGTGACAGCACCCACCACCCTGACAGCCCCAGCACATACCTAGGTGTCCCCAGTCACTCAGCGAATTCTGAGGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 90 bp GTGCCGACACTTTCACTATCACAGGTAAGGCCCTGGCAGCCTCCCTaGCCTCCACCTGCGTTGCTTCCTCACAGTAAATGCCCTGGACTT +
Preference number: 5 (lower is better)
Translates to: VPTLSLSQVRPWQPP*PPPALLPHSKCPGL
Trigger: AAGTCCAGGGCATTTACTGTGAGGAAGCAACGCAGGTGGAGGGCAGGGAGGCTGCCAGGGCCTTACCTGTGATAGTGAAAGTGTCGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 90 bp GAGTCCTCTGCACGCACCTTGCTAGTAGTGCTGGTTGGCACCCCTTaGGCCCTTGATTCAGTGCCTCTGACCTATTCCAGGCCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: ESSARTLLVVLVGTP*ALDSVPLTYSRPLS
Trigger: AGACAGAGGCCTGGAATAGGTCAGAGGCACTGAATCAAGGGCCCAAGGGGTGCCAACCAGCACTACTAGCAAGGTGCGTGCAGAGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 90 bp AGGATGTCCAGGGTGCCGACACTTTCACTATCACAGGTAAGGCCCTaGCAGCCTCCCTGCCCTCCACCTGCGTTGCTTCCTCACAGTAAA +
Preference number: 5 (lower is better)
Translates to: RMSRVPTLSLSQVRP*QPPCPPPALLPHSK
Trigger: TTTACTGTGAGGAAGCAACGCAGGTGGAGGGCAGGGAGGCTGCCAGGGCCTTACCTGTGATAGTGAAAGTGTCGGCACCCTGGACATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS GCA 90 bp GATCCTGGAGAATACACGGGCACAGCCGCGACTGCTGTCTGTGAGTaGTTTACCTCGAAGAGGGGCACATGTGAGTCACACTTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: DPGEYTGTAATAVCE*FTSKRGTCESHLQP
Trigger: AGGCTGCAAGTGTGACTCACATGTGCCCCTCTTCGAGGTAAAGCACTCACAGACAGCAGTCGCGGCTGTGCCCGTGTATTCTCCAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS CCA 90 bp TTGTCCGCTCCCCAGACTCGTGAACGATGTAGAGTGCGAACTCACTaGGGCCATCTTCCACCTGCACAGGCAGTCACAGGAAGTCAGATC +
Preference number: 5 (lower is better)
Translates to: LSAPQTRERCRVRTH*GHLPPAQAVTGSQI
Trigger: GATCTGACTTCCTGTGACTGCCTGTGCAGGTGGAAGATGGCCCCAGTGAGTTCGCACTCTACATCGTTCACGAGTCTGGGGAGCGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471808.1
CDS CCA 90 bp GTGCCTCAGAATTCGCTGAGTGACTGGGGACACCTAGGTATGTGCTaGGGCTGTCAGGGTGGTGGGTGCTGTCACAGCATGGGTTTCATA +
Preference number: 5 (lower is better)
Translates to: VPQNSLSDWGHLGMC*GCQGGGCCHSMGFI
Trigger: TATGAAACCCATGCTGTGACAGCACCCACCACCCTGACAGCCCCAGCACATACCTAGGTGTCCCCAGTCACTCAGCGAATTCTGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 90 bp TTTAAAAGTGTGTGGCACCACCCTCCACTCCCTCTCTCTTGCTCCTaGTTTCGCCATGTGAAGTGCCTGCTCCCCGTTCGCCTTCCAACA +
Preference number: 5 (lower is better)
Translates to: FKSVWHHPPLPLSCS*FRHVKCLLPVRLPT
Trigger: TGTTGGAAGGCGAACGGGGAGCAGGCACTTCACATGGCGAAAGCAGGAGCAAGAGAGAGGGAGTGGAGGGTGGTGCCACACACTTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 90 bp CATGGGGGACTTCCACGCCCAAGTCAGCTTCCATCAGGAAGATCCTaGCGATCTTCTCACATGGCCCATGCAGGATTCTGGAAATCAGCG +
Preference number: 5 (lower is better)
Translates to: HGGLPRPSQLPSGRS*RSSHMAHAGFWKSA
Trigger: CGCTGATTTCCAGAATCCTGCATGGGCCATGTGAGAAGATCGCCAGGATCTTCCTGATGGAAGCTGACTTGGGCGTGGAAGTCCCCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340258.10
ENST00000465735.5
ENST00000471941.5
ENST00000472561.5
ENST00000484477.2
ENST00000489171.5
ENST00000493490.1
CDS-3UTR CAA 90 bp CAGAAAAGGCAAGAGGTACACAGGCATCCACGGGACAGTGGTGATGGGGCTGAGGTTGTCATGGTGCTGTaGACCCTCACATTGGTCACG +
Preference number: 5 (lower is better)
Translates to: QKRQEVHRHPRDSGDGAEVVMVL*TLTLVT
Trigger: CGTGACCAATGTGAGGGTCAACAGCACCATGACAAC...CTCAGCCCCATCACCACTGTCCCGTGGATGCCTGTGTACCTCTTGCCTTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS GCA 90 bp GATTCCTGCTCATGCAGAAGGGAGGCAGAACAGGGCCCCCAGATCTaGCACTTTGGCATAAGGATTAAGTGGAGCGGCTGGCAATTGAGA +
Preference number: 5 (lower is better)
Translates to: DSCSCRREAEQGPQI*HFGIRIKWSGWQLR
Trigger: TCTCAATTGCCAGCCGCTCCACTTAATCCTTATGCCAAAGTGGCAGATCTGGGGGCCCTGTTCTGCCTCCCTTCTGCATGAGCAGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493490.1
CDS-3UTR CAA 90 bp TTTGGGAGAGTGTGGAGCTCCTGGAGACATCAACTGACAGGGCTCTGGCCAGGACGCAGTCTTTTAATTTaGTCCGCTCCCCAGACTCGT +
Preference number: 5 (lower is better)
Translates to: FGRVWSSWRHQLTGLWPGRSLLI*SAPQTR
Trigger: ACGAGTCTGGGGAGCGGACAAAATTAAAAGACTGCG...TCCTGGCCAGAGCCCTGTCAGTTGATGTCTCCAGGAGCTCCACACTCTCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484477.2
CDS-3UTR CAA 90 bp GGCTTCCAAGCTATGCTCTTGATGGGCACCCGTAAGGAGCTTCTACATGCATTAGTGTTGGCCAGTTACTaGGCCTCCACCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GFQAMLLMGTRKELLHALVLASY*ASTSCS
Trigger: GGAGCAGCTGGTGGAGGCCAAGTAACTGGCCAACAC...TAATGCATGTAGAAGCTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS TCA 90 bp TTCCTGGACTGGAGGCTGGATATTCCCAGCTTGCAGATAGGAAGGTaGGACCCAGACAGGGTAACCTGGGTCACAATGTCACATGGCCAT +
Preference number: 5 (lower is better)
Translates to: FLDWRLDIPSLQIGR*DPDRVTWVTMSHGH
Trigger: ATGGCCATGTGACATTGTGACCCAGGTTACCCTGTCTGGGTCTCACCTTCCTATCTGCAAGCTGGGAATATCCAGCCTCCAGTCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 90 bp GGCCAAGCTGAGTCATTTGCCAGAATACTTGCCAGCAACCTCAGCTaGCCTCTACCCAGAGCCGCAGTCTCGAAACTACACACTCCTAAT +
Preference number: 5 (lower is better)
Translates to: GQAESFARILASNLS*PLPRAAVSKLHTPN
Trigger: ATTAGGAGTGTGTAGTTTCGAGACTGCGGCTCTGGGTAGAGGGCAGCTGAGGTTGCTGGCAAGTATTCTGGCAAATGACTCAGCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 90 bp TCTCTCCTCGTTGGCACTAAAAGCCCTGTGAGAACAGGGACGCCATaGAAACTTCTTTGTATCCCTGGCAGCACTCAGGAAGACCCTGCA +
Preference number: 5 (lower is better)
Translates to: SLLVGTKSPVRTGTP*KLLCIPGSTQEDPA
Trigger: TGCAGGGTCTTCCTGAGTGCTGCCAGGGATACAAAGAAGTTTCCATGGCGTCCCTGTTCTCACAGGGCTTTTAGTGCCAACGAGGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS-3UTR CAA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCGAAGAGGACAGGGGCTaGTGGACCCACAGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSAEEDRG*WTHRGS
Trigger: AGAGCCCCTGTGGGTCCACAAGCCCCTGTCCTCTTC...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS GCA 90 bp AGATGTGTCACTGAGCTTCCTCACGGTGTCTCAGCTGGAAGCTCTTaGCCTCATGGTAGCAGTTGTAGGTTTTCAGCAGGCCTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: RCVTELPHGVSAGSS*PHGSSCRFSAGLRA
Trigger: AGCTCTTAGGCCTGCTGAAAACCTACAACTGCTACCATGAGGGCAAGAGCTTCCAGCTGAGACACCGTGAGGAAGCTCAGTGACACATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS TCA 90 bp GTCAGGGTGGTGGGTGCTGTCACAGCATGGGTTTCATATGAAATCTaGAGGGGGCAAAGCTCTGAATGTGTGCCCTCTACAGGAGTTACT +
Preference number: 5 (lower is better)
Translates to: VRVVGAVTAWVSYEI*RGQSSECVPSTGVT
Trigger: AGTAACTCCTGTAGAGGGCACACATTCAGAGCTTTGCCCCCTTCAGATTTCATATGAAACCCATGCTGTGACAGCACCCACCACCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 90 bp GAGAACTCGGCAGACAGTCTTCCTTCATCTTCTCTTCCTCTTGTCTaGAGACCTAGAAGTTACTTGCGTCCAGTCATCGCGCAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: ENSADSLPSSSLPLV*RPRSYLRPVIAQSR
Trigger: TCTGGACTGCGCGATGACTGGACGCAAGTAACTTCTAGGTCTGCAGACAAGAGGAAGAGAAGATGAAGGAAGACTGTCTGCCGAGTTCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340258.10
ENST00000427758.5
ENST00000483709.6
ENST00000489171.5
CDS GCA 90 bp TTCCAACAGCAGCAGCGTCCACTTGCCAGGGCTGACAAAGGGTCTTaGTTTTCTCACCACTGCTTAGACATCACTAGCCCTATATCCCAT +
Preference number: 5 (lower is better)
Translates to: FQQQQRPLARADKGS*FSHHCLDITSPISH
Trigger: ATGGGATATAGGGCTAGTGATGTCTAAGCAGTGGTGAGAAAAGCAAGACCCTTTGTCAGCCCTGGCAAGTGGACGCTGCTGCTGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 90 bp CATGGGTTTCATATGAAATCTGAAGGGGGCAAAGCTCTGAATGTGTaGCCTCTACAGGAGTTACTACTGCAGAAGCAGGCAAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: HGFHMKSEGGKALNV*PLQELLLQKQARPS
Trigger: GCTGGGCCTTGCCTGCTTCTGCAGTAGTAACTCCTGTAGAGGGCACACATTCAGAGCTTTGCCCCCTTCAGATTTCATATGAAACCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS-3UTR CAA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCCTGTGGGTGCTCATCTaGGAGCCAAGAGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSALWVLI*EPRAGC
Trigger: ACAGCCAGCTCTTGGCTCCAAGATGAGCACCCACAG...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATTGCTCAGCTGATCTCTaGACCCTTCCAGTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNCSADL*TLPVSG
Trigger: GCCAGACACTGGAAGGGTCAAGAGATCAGCTGAGCA...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS TCA 90 bp TTCACAAATCCCATTTCTCTCTCCTCGTTGGCACTAAAAGCCCTGTaGGAACAGGGACGCCATGGAAACTTCTTTGTATCCCTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: FTNPISLSSLALKAL*EQGRHGNFFVSLAA
Trigger: TGCTGCCAGGGATACAAAGAAGTTTCCATGGCGTCCCTGTTCTCACAGGGCTTTTAGTGCCAACGAGGAGAGAGAAATGGGATTTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS-3UTR CAA 90 bp ATGGAGCCTCTCCTATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCTTCCAAGCTATGCTCTaGATGGGCACCCGTAAGGAG +
Preference number: 5 (lower is better)
Translates to: MEPLLSLQAFVVLPFKSAFQAML*MGTRKE
Trigger: CTCCTTACGGGTGCCCATCAAGAGCATAGCTTGGAA...GGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp GTCTGGCCTTCTTCTCCTGATGAGAAGACCCCTAGACACAGGACAGACTGGCTCTTGCAGCTTTTCAGATaGCCTCTGAACAGCAAATAT +
Preference number: 5 (lower is better)
Translates to: VWPSSPDEKTPRHRTDWLLQLFR*PLNSKY
Trigger: ATATTTGCTGTTCAGAGGCAATCTGAAAAGCTGCAA...GAGCCAGTCTGTCCTGTGTCTAGGGGTCTTCTCATCAGGAGAAGAAGGCCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS TCA 90 bp CAACGTTGTCCAGCCCATATCCAGGACTTACTCATCTTGCATAGCTaGAACATTATATCAGCTGCACAGCAACTCTCCACTTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QRCPAHIQDLLILHS*NIISAAQQLSTSSS
Trigger: GGAGGAGGAAGTGGAGAGTTGCTGTGCAGCTGATATAATGTTTCAGCTATGCAAGATGAGTAAGTCCTGGATATGGGCTGGACAACGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 90 bp CGTCCACTTGCCAGGGCTGACAAAGGGTCTTGCTTTTCTCACCACTaGTTAGACATCACTAGCCCTATATCCCATACCAGAATTTCTACA +
Preference number: 5 (lower is better)
Translates to: RPLARADKGSCFSHH*LDITSPISHTRIST
Trigger: TGTAGAAATTCTGGTATGGGATATAGGGCTAGTGATGTCTAAGCAGTGGTGAGAAAAGCAAGACCCTTTGTCAGCCCTGGCAAGTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS-3UTR CAA 90 bp TATCTTTGCAAGCCTTTGTGGTTCTTCCCTTTAAATCTGCCATCCACGGACCTCCGCAGTCTTTTAATTTaGTCCGCTCCCCAGACTCGT +
Preference number: 5 (lower is better)
Translates to: YLCKPLWFFPLNLPSTDLRSLLI*SAPQTR
Trigger: ACGAGTCTGGGGAGCGGACAAAATTAAAAGACTGCG...GAGGTCCGTGGATGGCAGATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCTCTTCCACCCTAAATTaGTTCAGCAGCAGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLSSTLN*FSSRVS
Trigger: GCTCACCCTGCTGCTGAACAAATTTAGGGTGGAAGA...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATAAGTCACAAACACAAATaGTTCAGTATCTGGGGAATT +
Preference number: 5 (lower is better)
Translates to: RSRGHCGKVMAESRLDLISHKHK*FSIWGI
Trigger: AATTCCCCAGATACTGAACAATTTGTGTTTGTGACT...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp AGAAGCCGGGGACACTGTGGCAAGGTGATGGCTGAAAGCAGGCTAGATCTCATATATCTTTGCAAGCCTTaGTGGTTCTTCCCTTTAAAT +
Preference number: 5 (lower is better)
Translates to: RSRGHCGKVMAESRLDLIYLCKP*WFFPLN
Trigger: ATTTAAAGGGAAGAACCACAAAGGCTTGCAAAGATA...TATGAGATCTAGCCTGCTTTCAGCCATCACCTTGCCACAGTGTCCCCGGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS TCA 90 bp AGGATTAAGTGGAGCGGCTGGCAATTGAGAAGAAGAAGATACAAGTaGGGCTCTTTGCCCTCCCCTATTTGCCAAAAAGCAGGACATAAA +
Preference number: 5 (lower is better)
Translates to: RIKWSGWQLRRRRYK*GSLPSPICQKAGHK
Trigger: TTTATGTCCTGCTTTTTGGCAAATAGGGGAGGGCAAAGAGCCTCACTTGTATCTTCTTCTTCTCAATTGCCAGCCGCTCCACTTAATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493490.1
CDS-3UTR CAA 90 bp TCAGTTACAGCTGAACAATGGGACAGGAGCTGTCCTCCACCTGAGATTGTAAATGAGAAAGTGAGATACTaGTGGCCTTATTCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SVTAEQWDRSCPPPEIVNEKVRY*WPYSWS
Trigger: AGACCAGGAATAAGGCCACAAGTATCTCACTTTCTC...ATTTACAATCTCAGGTGGAGGACAGCTCCTGTCCCATTGTTCAGCTGTAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS-3UTR CAA 90 bp TTGATTTCTGCAGAGAAAGTGAGATACTTGTGGCCTTATTCCTGGTCTCACCTCGAGCCTCTCCTATCTTaGCAAGCCTTTGTGGTTCTT +
Preference number: 5 (lower is better)
Translates to: LISAEKVRYLWPYSWSHLEPLLS*QAFVVL
Trigger: AAGAACCACAAAGGCTTGCAAAGATAGGAGAGGCTC...GAGGTGAGACCAGGAATAAGGCCACAAGTATCTCACTTTCTCTGCAGAAATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340258.10
CDS GCA 72 bp GACCTCTCTGCCCACACTGCACCTGGGAGGGGGTCCTaGGCCACCAGGTCCTATGGCCACCAGGCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: DLSAHTAPGRGS*ATRSYGHQARQ
Trigger: CTGCCGGGCCTGGTGGCCATAGGACCTGGTGGCGCAGGACCCCCTCCCAGGTGCAGTGTGGGCAGAGAGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS TCA 72 bp GCCAGCTGCTGGCCGGCAGGCACGTCCACACCGCGGTaGAGAAGTGGTTCCAGGGACGCACAGCCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: ASCWPAGTSTPR*RSGSRDAQPVC
Trigger: GCAGACAGGCTGTGCGTCCCTGGAACCACTTCTTCACCGCGGTGTGGACGTGCCTGCCGGCCAGCAGCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp CAGTCCAGAAGCCACTGCATGTGTCGTGTCCTCGCTTaGACCGGAGCTGCGCCCGCAGCGCCTGCTGACCCC +
Preference number: 6 (lower is better)
Translates to: QSRSHCMCRVLA*TGAAPAAPADP
Trigger: GGGGTCAGCAGGCGCTGCGGGCGCAGCTCCGGTGCAAGCGAGGACACGACACATGCAGTGGCTTCTGGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS GCA 72 bp CTGCTCATGCCAAGCAGGGGACCTCTCTGCCCACACTaGACCTGGGAGGGGGTCCTGCGCCACCAGGTCCTA +
Preference number: 6 (lower is better)
Translates to: LLMPSRGPLCPH*TWEGVLRHQVL
Trigger: TAGGACCTGGTGGCGCAGGACCCCCTCCCAGGTGCAGTGTGGGCAGAGAGGTCCCCTGCTTGGCATGAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp CGGGCTGAGGAGGAGGCGAGACTCACGGGACAGGCCTaGGTCTGGTCCAGGATGTCCAGGGTGCCGACACTT +
Preference number: 6 (lower is better)
Translates to: RAEEEARLTGQA*VWSRMSRVPTL
Trigger: AAGTGTCGGCACCCTGGACATCCTGGACCAGACGCAGGCCTGTCCCGTGAGTCTCGCCTCCTCCTCAGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 72 bp ATGCCAAGCAGGGGACCTCTCTGCCCACACTGCACCTaGGAGGGGGTCCTGCGCCACCAGGTCCTATGGCCA +
Preference number: 6 (lower is better)
Translates to: MPSRGPLCPHCT*EGVLRHQVLWP
Trigger: TGGCCATAGGACCTGGTGGCGCAGGACCCCCTCCCAGGTGCAGTGTGGGCAGAGAGGTCCCCTGCTTGGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 72 bp AGGGGCCACCTAGAAGGGCCCAACCTCCAGGCCTCTTaGCAGGATGAGCCCCAGGCCAGGGTAGCTAGTGCT +
Preference number: 6 (lower is better)
Translates to: RGHLEGPNLQAS*QDEPQARVASA
Trigger: AGCACTAGCTACCCTGGCCTGGGGCTCATCCTGCCAAGAGGCCTGGAGGTTGGGCCCTTCTAGGTGGCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS CCA 72 bp AGGCCCGGCAGGGTCCCACACCCACCAGAGGAGAAGTaGGCACTCTCTGTCCTAGCTGTGTCTCAGCCTCAC +
Preference number: 6 (lower is better)
Translates to: RPGRVPHPPEEK*ALSVLAVSQPH
Trigger: GTGAGGCTGAGACACAGCTAGGACAGAGAGTGCCCACTTCTCCTCTGGTGGGTGTGGGACCCTGCCGGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 72 bp GCTCATGCCTGGCCAGGGGCACAGCGCAGAACACAGTaGCTGAGTCAGGTGTCCCACAGGAAGCCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: AHAWPGAQRRTQ*LSQVSHRKPAA
Trigger: AGCAGCTGGCTTCCTGTGGGACACCTGACTCAGCCACTGTGTTCTGCGCTGTGCCCCTGGCCAGGCATGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp GGGGCCAGCAACCAGGGCTCAGTGTACACCTGCCACTaGTGGGGACTTTGGAAGAGGCAGGTGTTGGCCAGT +
Preference number: 6 (lower is better)
Translates to: GASNQGSVYTCH*WGLWKRQVLAS
Trigger: ACTGGCCAACACCTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000472561.5
ENST00000489171.5
CDS GCA 72 bp GTGTGGCACCACCCTCCACTCCCTCTCTCTTGCTCCTaGTTTCGCCATGTGAAGTGCCTGCTCCCCGTTCGC +
Preference number: 6 (lower is better)
Translates to: VWHHPPLPLSCS*FRHVKCLLPVR
Trigger: GCGAACGGGGAGCAGGCACTTCACATGGCGAAAGCAGGAGCAAGAGAGAGGGAGTGGAGGGTGGTGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 72 bp AGATCTGGCACCCTAGAGCCCTGTGGTCACGTGCACTaGGGCAGATGGGGACGTGAGGGCCATTCCTGGACT +
Preference number: 6 (lower is better)
Translates to: RSGTLEPCGHVH*GRWGREGHSWT
Trigger: AGTCCAGGAATGGCCCTCACGTCCCCATCTGCCCCAGTGCACGTGACCACAGGGCTCTAGGGTGCCAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS CCA 72 bp GAGGAGGAGGCGAGACTCACGGGACAGGCCTGCGTCTaGTCCAGGATGTCCAGGGTGCCGACACTTTCACTA +
Preference number: 6 (lower is better)
Translates to: EEEARLTGQACV*SRMSRVPTLSL
Trigger: TAGTGAAAGTGTCGGCACCCTGGACATCCTGGACCAGACGCAGGCCTGTCCCGTGAGTCTCGCCTCCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CAA 90 bp TCAGTGTACACCTGCCACTGCTGGGGACTTTGGAAGAGGCAGGTGTaGGCCAGTTACTTGGCCTCCACCAGCTGCTCCAGGCGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SVYTCHCWGLWKRQV*ASYLASTSCSRRCS
Trigger: GCTGCAGCGCCTGGAGCAGCTGGTGGAGGCCAAGTAACTGGCCAACACCTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000472561.5
ENST00000489171.5
CDS TCA 72 bp TGCTCTGAACACTCAGGCCTTGCACATCCCTCCTCCTaGGTGGCCCCATCCCCTCAGGAAGGACCATCAGCC +
Preference number: 6 (lower is better)
Translates to: CSEHSGLAHPSS*VAPSPQEGPSA
Trigger: GGCTGATGGTCCTTCCTGAGGGGATGGGGCCACTCAGGAGGAGGGATGTGCAAGGCCTGAGTGTTCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp GCCAGTTACTTGGCCTCCACCAGCTGCTCCAGGCGCTaGAGCATCGTCAGACGCAGGGCTTGGAACTTCATG +
Preference number: 6 (lower is better)
Translates to: ASYLASTSCSRR*SIVRRRAWNFM
Trigger: CATGAAGTTCCAAGCCCTGCGTCTGACGATGCTGCAGCGCCTGGAGCAGCTGGTGGAGGCCAAGTAACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000472561.5
ENST00000489171.5
CDS GCA 72 bp AGAAGTGGTTCCAGGGACGCACAGCCTGTCTGCTCATaGCAAGCAGGGGACCTCTCTGCCCACACTGCACCT +
Preference number: 6 (lower is better)
Translates to: RSGSRDAQPVCS*QAGDLSAHTAP
Trigger: AGGTGCAGTGTGGGCAGAGAGGTCCCCTGCTTGGCATGAGCAGACAGGCTGTGCGTCCCTGGAACCACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp AGCTGCCTACCTTCCCTGTGCCCCCTAGGGATGGGATaGTCTGAACACTCAGGCCTTGCACATCCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SCLPSLCPLGMG*SEHSGLAHPSS
Trigger: GGAGGAGGGATGTGCAAGGCCTGAGTGTTCAGAGCATCCCATCCCTAGGGGGCACAGGGAAGGTAGGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp AATGGCAGGGTGGGTGATGCTGACAGAGCAACTGCCTaGTGTCGGGAGATCTGGCACCCTAGAGCCCTGTGG +
Preference number: 6 (lower is better)
Translates to: NGRVGDADRATA*CREIWHPRALW
Trigger: CCACAGGGCTCTAGGGTGCCAGATCTCCCGACAGCAGGCAGTTGCTCTGTCAGCATCACCCACCCTGCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 72 bp TACTTGCGTCCAGTCATCGCGCAGTCCAGAAGCCACTaGATGTGTCGTGTCCTCGCTTGCACCGGAGCTGCG +
Preference number: 6 (lower is better)
Translates to: YLRPVIAQSRSH*MCRVLACTGAA
Trigger: CGCAGCTCCGGTGCAAGCGAGGACACGACACATGCAGTGGCTTCTGGACTGCGCGATGACTGGACGCAAGTA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 72 bp GGGCAGCTTGCGGGCTCCGCTTACCCGAGCTGTCTGTaGAACTCTCAGCCTTGTGCACTGGCTGAATGCTTG +
Preference number: 6 (lower is better)
Translates to: GQLAGSAYPSCL*NSQPCALAECL
Trigger: CAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGTAAGCGGAGCCCGCAAGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS CCA 72 bp ACGCTGTCTCCCTTCCCGAAGGGAAAGCCACAGCCCTaGCTAATGTTGGAGGAAGGGGAGGCCTGGACAGCT +
Preference number: 6 (lower is better)
Translates to: TLSPFPKGKPQP*LMLEEGEAWTA
Trigger: AGCTGTCCAGGCCTCCCCTTCCTCCAACATTAGCCAGGGCTGTGGCTTTCCCTTCGGGAAGGGAGACAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 72 bp TTAATCACCAGAGACAACCCGAGCCCCTCCTCAGCCTaGAGAGGGCACCAGAGGAACCTGCACAGCACGTCC +
Preference number: 6 (lower is better)
Translates to: LITRDNPSPSSA*RGHQRNLHSTS
Trigger: GGACGTGCTGTGCAGGTTCCTCTGGTGCCCTCTCCAGGCTGAGGAGGGGCTCGGGTTGTCTCTGGTGATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493490.1
CDS CAA 72 bp ACCTGCCACTGCTGGGGACTTTGGAAGAGGCAGGTGTaGGCCAGTTACTTGGCCTCCACCAGCTGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: TCHCWGLWKRQV*ASYLASTSCSR
Trigger: CCTGGAGCAGCTGGTGGAGGCCAAGTAACTGGCCAACACCTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000472561.5
ENST00000489171.5
CDS TCA 72 bp TGGTTGGCACCCCTTGGGCCCTTGATTCAGTGCCTCTaGCCTATTCCAGGCCTCTGTCTCTGCGAGACCACC +
Preference number: 6 (lower is better)
Translates to: WLAPLGPLIQCL*PIPGLCLCETT
Trigger: GGTGGTCTCGCAGAGACAGAGGCCTGGAATAGGTCAGAGGCACTGAATCAAGGGCCCAAGGGGTGCCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS TCA 72 bp CCTACCTTCCCTGTGCCCCCTAGGGATGGGATGCTCTaGACACTCAGGCCTTGCACATCCCTCCTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: PTFPVPPRDGML*TLRPCTSLLLS
Trigger: ACTCAGGAGGAGGGATGTGCAAGGCCTGAGTGTTCAGAGCATCCCATCCCTAGGGGGCACAGGGAAGGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS TCA 72 bp CCCTGGGGTAGGACACAGGCGGGAAGCAAGGCAGGCTaGGGTGAGGCCTGGATTTCAAACCAAGAGAGTCAG +
Preference number: 6 (lower is better)
Translates to: PWGRTQAGSKAG*GEAWISNQESQ
Trigger: CTGACTCTCTTGGTTTGAAATCCAGGCCTCACCTCAGCCTGCCTTGCTTCCCGCCTGTGTCCTACCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 72 bp TGCTGCCAACCTGGGGCCCTAATCAACAGAGTCCTCTaGACGCACCTTGCTAGTAGTGCTGGTTGGCACCCC +
Preference number: 6 (lower is better)
Translates to: CCQPGALINRVL*THLASSAGWHP
Trigger: GGGGTGCCAACCAGCACTACTAGCAAGGTGCGTGCAGAGGACTCTGTTGATTAGGGCCCCAGGTTGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp CACATGGCCATACCCCTCTTGGTCTCTGTCTTAGGGTaGCCATGGAGGTCTTTGGTGGCCCCAGCCCTGTCT +
Preference number: 6 (lower is better)
Translates to: HMAIPLLVSVLG*PWRSLVAPALS
Trigger: AGACAGGGCTGGGGCCACCAAAGACCTCCATGGGCACCCTAAGACAGAGACCAAGAGGGGTATGGCCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 72 bp TTCTCGCCGGCCAGGCATAACCAGAGGAGACCAGACTaGCATCGCAATGCACCCGGATGGTTCTGCACATGG +
Preference number: 6 (lower is better)
Translates to: FSPARHNQRRPD*HRNAPGWFCTW
Trigger: CCATGTGCAGAACCATCCGGGTGCATTGCGATGGCAGTCTGGTCTCCTCTGGTTATGCCTGGCCGGCGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 72 bp CAGGGCTCAGTGTACACCTGCCACTGCTGGGGACTTTaGAAGAGGCAGGTGTTGGCCAGTTACTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: QGSVYTCHCWGL*KRQVLASYLAS
Trigger: GGAGGCCAAGTAACTGGCCAACACCTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTACACTGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000472561.5
ENST00000489171.5
CDS CCA 72 bp GCCAGCAACCAGGGCTCAGTGTACACCTGCCACTGCTaGGGACTTTGGAAGAGGCAGGTGTTGGCCAGTTAC +
Preference number: 6 (lower is better)
Translates to: ASNQGSVYTCHC*GLWKRQVLASY
Trigger: GTAACTGGCCAACACCTGCCTCTTCCAAAGTCCCCAGCAGTGGCAGGTGTACACTGAGCCCTGGTTGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000472561.5
ENST00000489171.5
CDS CCA 72 bp ACCCGAGCTGTCTGTGGAACTCTCAGCCTTGTGCACTaGCTGAATGCTTGGCCCCTGGGCTGTGATGTTCCC +
Preference number: 6 (lower is better)
Translates to: TRAVCGTLSLVH*LNAWPLGCDVP
Trigger: GGGAACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTGCACAAGGCTGAGAGTTCCACAGACAGCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS CCA 72 bp TGGGTAGGGGTCCAGCAGGTGAAGCCCCTCGTTGGCTaGGGCACAAAGCTGTCCTTCGGAGATTGTGGTTGT +
Preference number: 6 (lower is better)
Translates to: WVGVQQVKPLVG*GTKLSFGDCGC
Trigger: ACAACCACAATCTCCGAAGGACAGCTTTGTGCCCCAGCCAACGAGGGGCTTCACCTGCTGGACCCCTACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 72 bp TCCCTAGGTCTGCAGGTGACATGGCTTCTCTCCTGCTaGCAACCTGGGGCCCTAATCAACAGAGTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: SLGLQVTWLLSC*QPGALINRVLC
Trigger: GCAGAGGACTCTGTTGATTAGGGCCCCAGGTTGGCAGCAGGAGAGAAGCCATGTCACCTGCAGACCTAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 72 bp GCACGCACCTTGCTAGTAGTGCTGGTTGGCACCCCTTaGGCCCTTGATTCAGTGCCTCTGACCTATTCCAGG +
Preference number: 6 (lower is better)
Translates to: ARTLLVVLVGTP*ALDSVPLTYSR
Trigger: CCTGGAATAGGTCAGAGGCACTGAATCAAGGGCCCAAGGGGTGCCAACCAGCACTACTAGCAAGGTGCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 72 bp CCCCAGACTCGTGAACGATGTAGAGTGCGAACTCACTaGGGCCATCTTCCACCTGCACAGGCAGTCACAGGA +
Preference number: 6 (lower is better)
Translates to: PQTRERCRVRTH*GHLPPAQAVTG
Trigger: TCCTGTGACTGCCTGTGCAGGTGGAAGATGGCCCCAGTGAGTTCGCACTCTACATCGTTCACGAGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471808.1
CDS CCA 72 bp AATTCGCTGAGTGACTGGGGACACCTAGGTATGTGCTaGGGCTGTCAGGGTGGTGGGTGCTGTCACAGCATG +
Preference number: 6 (lower is better)
Translates to: NSLSDWGHLGMC*GCQGGGCCHSM
Trigger: CATGCTGTGACAGCACCCACCACCCTGACAGCCCCAGCACATACCTAGGTGTCCCCAGTCACTCAGCGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS CAA 72 bp CTTCTCCCGGTGCCTTCCAACAGCAGCAGCGTCCACTaGCCAGGGCTGACAAAGGGTCTTGCTTTTCTCACC +
Preference number: 6 (lower is better)
Translates to: LLPVPSNSSSVH*PGLTKGLAFLT
Trigger: GGTGAGAAAAGCAAGACCCTTTGTCAGCCCTGGCAAGTGGACGCTGCTGCTGTTGGAAGGCACCGGGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CAA 72 bp GTAAGGCCCTGGCAGCCTCCCTGCCCTCCACCTGCGTaGCTTCCTCACAGTAAATGCCCTGGACTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: VRPWQPPCPPPA*LPHSKCPGLAF
Trigger: AAAAGCAAGTCCAGGGCATTTACTGTGAGGAAGCAACGCAGGTGGAGGGCAGGGAGGCTGCCAGGGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS TCA 72 bp CTTGCTAGTAGTGCTGGTTGGCACCCCTTGGGCCCTTaGTTCAGTGCCTCTGACCTATTCCAGGCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: LASSAGWHPLGP*FSASDLFQASV
Trigger: GACAGAGGCCTGGAATAGGTCAGAGGCACTGAATCAAGGGCCCAAGGGGTGCCAACCAGCACTACTAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS TCA 72 bp GTGGGAGGTGTTTGGATCATGGGAGCAGATCCCTCATaGGTGGCTTGGGCCATCCCCGTGGTGATAAGTGAG +
Preference number: 6 (lower is better)
Translates to: VGGVWIMGADPS*VAWAIPVVISE
Trigger: CTCACTTATCACCACGGGGATGGCCCAAGCCACTCATGAGGGATCTGCTCCCATGATCCAAACACCTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS GCA 72 bp TTCTGGGGCGATGGCTCCTTTCTGAAAACAGACAACTaGAGGGCTGAGATGGCTGCCGGCAGAGAAAGGGAG +
Preference number: 6 (lower is better)
Translates to: FWGDGSFLKTDN*RAEMAAGRERE
Trigger: CTCCCTTTCTCTGCCGGCAGCCATCTCAGCCCTGCAGTTGTCTGTTTTCAGAAAGGAGCCATCGCCCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427758.5
ENST00000471941.5
CDS GCA 72 bp GTTTCCCTAGGTCTGCAGGTGACATGGCTTCTCTCCTaGTGCCAACCTGGGGCCCTAATCAACAGAGTCCTC +
Preference number: 6 (lower is better)
Translates to: VSLGLQVTWLLS*CQPGALINRVL
Trigger: GAGGACTCTGTTGATTAGGGCCCCAGGTTGGCAGCAGGAGAGAAGCCATGTCACCTGCAGACCTAGGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp GAATACACGGGCACAGCCGCGACTGCTGTCTGTGAGTaGTTTACCTCGAAGAGGGGCACATGTGAGTCACAC +
Preference number: 6 (lower is better)
Translates to: EYTGTAATAVCE*FTSKRGTCESH
Trigger: GTGTGACTCACATGTGCCCCTCTTCGAGGTAAAGCACTCACAGACAGCAGTCGCGGCTGTGCCCGTGTATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 72 bp TCATGCAGAAGGGAGGCAGAACAGGGCCCCCAGATCTaGCACTTTGGCATAAGGATTAAGTGGAGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: SCRREAEQGPQI*HFGIRIKWSGW
Trigger: CCAGCCGCTCCACTTAATCCTTATGCCAAAGTGGCAGATCTGGGGGCCCTGTTCTGCCTCCCTTCTGCATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493490.1
CDS CAA 90 bp CTATCACAGGTAAGGCCCTGGCAGCCTCCCTGCCCTCCACCTGCGTaGCTTCCTCACAGTAAATGCCCTGGACTTGCTTTTGGCATTGTA +
Preference number: 6 (lower is better)
Translates to: LSQVRPWQPPCPPPA*LPHSKCPGLAFGIV
Trigger: TACAATGCCAAAAGCAAGTCCAGGGCATTTACTGTGAGGAAGCAACGCAGGTGGAGGGCAGGGAGGCTGCCAGGGCCTTACCTGTGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CCA 72 bp CTTCCACGCCCAAGTCAGCTTCCATCAGGAAGATCCTaGCGATCTTCTCACATGGCCCATGCAGGATTCTGG +
Preference number: 6 (lower is better)
Translates to: LPRPSQLPSGRS*RSSHMAHAGFW
Trigger: CCAGAATCCTGCATGGGCCATGTGAGAAGATCGCCAGGATCTTCCTGATGGAAGCTGACTTGGGCGTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340258.10
ENST00000465735.5
ENST00000471941.5
ENST00000472561.5
ENST00000484477.2
ENST00000489171.5
ENST00000493490.1
CDS TCA 72 bp TGCCTTCCAACAGCAGCAGCGTCCACTTGCCAGGGCTaGCAAAGGGTCTTGCTTTTCTCACCACTGCTTAGA +
Preference number: 6 (lower is better)
Translates to: CLPTAAASTCQG*QRVLLFSPLLR
Trigger: TCTAAGCAGTGGTGAGAAAAGCAAGACCCTTTGTCAGCCCTGGCAAGTGGACGCTGCTGCTGTTGGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp TCCCTTCTTCCTCACGGTGTCTCAGCTGGAAGCTCTTaGCCTCATGGTAGCAGTTGTAGGTTTTCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: SLLPHGVSAGSS*PHGSSCRFSAG
Trigger: GCCTGCTGAAAACCTACAACTGCTACCATGAGGGCAAGAGCTTCCAGCTGAGACACCGTGAGGAAGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340258.10
ENST00000427758.5
ENST00000428466.1
ENST00000489171.5
CDS GCA 72 bp AGAGTCCCTTCTCACGGTGTCTCAGCTGGAAGCTCTTaGCCTCATGGTAGCAGTTGTAGGTTTTCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: RVPSHGVSAGSS*PHGSSCRFSAG
Trigger: GCCTGCTGAAAACCTACAACTGCTACCATGAGGGCAAGAGCTTCCAGCTGAGACACCGTGAGAAGGGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462822.1
CDS GCA 72 bp GAGTCATTTGCCAGAATACTTGCCAGCAACCTCAGCTaGCCTCTACCCAGAGCCGCAGTCTCGAAACTACAC +
Preference number: 6 (lower is better)
Translates to: ESFARILASNLS*PLPRAAVSKLH
Trigger: GTGTAGTTTCGAGACTGCGGCTCTGGGTAGAGGGCAGCTGAGGTTGCTGGCAAGTATTCTGGCAAATGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp ACTGAGCTTCCTCACGGTGTCTCAGCTGGAAGCTCTTaGCCTCATGGTAGCAGTTGTAGGTTTTCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: TELPHGVSAGSS*PHGSSCRFSAG
Trigger: GCCTGCTGAAAACCTACAACTGCTACCATGAGGGCAAGAGCTTCCAGCTGAGACACCGTGAGGAAGCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483709.6
CDS CAA 72 bp AAGCCCTGTGAGAACAGGGACGCCATGGAAACTTCTTaGTATCCCTGGCAGCACTCAGGAAGACCCTGCACA +
Preference number: 6 (lower is better)
Translates to: KPCENRDAMETS*YPWQHSGRPCT
Trigger: TGTGCAGGGTCTTCCTGAGTGCTGCCAGGGATACAAAGAAGTTTCCATGGCGTCCCTGTTCTCACAGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CAA 72 bp GTCACTCTGTGTGTAAGCCTGGCCAAGCTGAGTCATTaGCCAGAATACTTGCCAGCAACCTCAGCTGCCCTC +
Preference number: 6 (lower is better)
Translates to: VTLCVSLAKLSH*PEYLPATSAAL
Trigger: GAGGGCAGCTGAGGTTGCTGGCAAGTATTCTGGCAAATGACTCAGCTTGGCCAGGCTTACACACAGAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS TCA 72 bp CTAAGAGCTCCGACTTCTGAATGGACTTGCTGTCACTaGTGGGCACGTGAGAACTCGGCAGACAGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LRAPTSEWTCCH*WARENSADSLP
Trigger: AGGAAGACTGTCTGCCGAGTTCTCACGTGCCCATCAGTGACAGCAAGTCCATTCAGAAGTCGGAGCTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340258.10
ENST00000427758.5
ENST00000462822.1
ENST00000483709.6
CDS GCA 72 bp TACTACTGCAGAAGCAGGCAAGGCCCAGCTACTAACTaGGTCTTTTGGGAGTGGGCCGAGGAGGAGATAAAT +
Preference number: 6 (lower is better)
Translates to: YYCRSRQGPATN*VFWEWAEEEIN
Trigger: ATTTATCTCCTCCTCGGCCCACTCCCAAAAGACGCAGTTAGTAGCTGGGCCTTGCCTGCTTCTGCAGTAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS CCA 72 bp ATTGCCCATGCCTCCCAGCCATGGTCATGTGTAGCTTaGGGATCCCCTATTGGACAGGCTCAAAAAGAAGCA +
Preference number: 6 (lower is better)
Translates to: IAHASQPWSCVA*GSPIGQAQKEA
Trigger: TGCTTCTTTTTGAGCCTGTCCAATAGGGGATCCCCAAGCTACACATGACCATGGCTGGGAGGCATGGGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CAA 72 bp TCTTCTCTTCCTCTTGTCTGCAGACCTAGAAGTTACTaGCGTCCAGTCATCGCGCAGTCCAGAAGCCACTGC +
Preference number: 6 (lower is better)
Translates to: SSLPLVCRPRSY*RPVIAQSRSHC
Trigger: GCAGTGGCTTCTGGACTGCGCGATGACTGGACGCAAGTAACTTCTAGGTCTGCAGACAAGAGGAAGAGAAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340258.10
ENST00000427758.5
ENST00000489171.5
CDS CAA 90 bp CTTCCTTCATCTTCTCTTCCTCTTGTCTGCAGACCTAGAAGTTACTaGCGTCCAGTCATCGCGCAGTCCAGAAGCCACTGCATGTGTCGT +
Preference number: 6 (lower is better)
Translates to: LPSSSLPLVCRPRSY*RPVIAQSRSHCMCR
Trigger: ACGACACATGCAGTGGCTTCTGGACTGCGCGATGACTGGACGCAAGTAACTTCTAGGTCTGCAGACAAGAGGAAGAGAAGATGAAGGAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340258.10
ENST00000489171.5
CDS CAA 90 bp CACGTGAGAACTCGGCAGACAGTCTTCCTTCATCTTCTCTTCCTCTaGTCTGCAGACCTAGAAGTTACTTGCGTCCAGTCATCGCGCAGT +
Preference number: 6 (lower is better)
Translates to: HVRTRQTVFLHLLFL*SADLEVTCVQSSRS
Trigger: ACTGCGCGATGACTGGACGCAAGTAACTTCTAGGTCTGCAGACAAGAGGAAGAGAAGATGAAGGAAGACTGTCTGCCGAGTTCTCACGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340258.10
ENST00000427758.5
ENST00000483709.6
ENST00000489171.5
CDS GCA 72 bp CACCTGCACAGGCAGTCACAGGAAGTCAGATCACGGTaGTTGGAGATGGGAGAGAACCTAAATTTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: HLHRQSQEVRSR*LEMGENLNLFS
Trigger: GCTGAACAAATTTAGGTTCTCTCCCATCTCCAAGCACCGTGATCTGACTTCCTGTGACTGCCTGTGCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471808.1
CDS CCA 72 bp GTTGGCACTAAAAGCCCTGTGAGAACAGGGACGCCATaGAAACTTCTTTGTATCCCTGGCAGCACTCAGGAA +
Preference number: 6 (lower is better)
Translates to: VGTKSPVRTGTP*KLLCIPGSTQE
Trigger: TTCCTGAGTGCTGCCAGGGATACAAAGAAGTTTCCATGGCGTCCCTGTTCTCACAGGGCTTTTAGTGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CAA 72 bp CTGCACAGGCAGTCACAGGAAGTCAGATCACGGTGCTaGGAGATGGGAGAGAACCTAAATTTGTTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LHRQSQEVRSRC*EMGENLNLFSS
Trigger: GCTGCTGAACAAATTTAGGTTCTCTCCCATCTCCAAGCACCGTGATCTGACTTCCTGTGACTGCCTGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471808.1
CDS CAA 72 bp CACCTGCGTTGCTTCCTCACAGTAAATGCCCTGGACTaGCTTTTGGCATTGTACAGCCTCTTGCTTTTCCCC +
Preference number: 6 (lower is better)
Translates to: HLRCFLTVNALD*LLALYSLLLFP
Trigger: GGGGAAAAGCAAGAGGCTGTACAATGCCAAAAGCAAGTCCAGGGCATTTACTGTGAGGAAGCAACGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS TCA 72 bp CCCATTTCTCTCTCCTCGTTGGCACTAAAAGCCCTGTaGGAACAGGGACGCCATGGAAACTTCTTTGTATCC +
Preference number: 6 (lower is better)
Translates to: PISLSSLALKAL*EQGRHGNFFVS
Trigger: GGATACAAAGAAGTTTCCATGGCGTCCCTGTTCTCACAGGGCTTTTAGTGCCAACGAGGAGAGAGAAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS TCA 72 bp GTGGGTGCTGTCACAGCATGGGTTTCATATGAAATCTaGAGGGGGCAAAGCTCTGAATGTGTGCCCTCTACA +
Preference number: 6 (lower is better)
Translates to: VGAVTAWVSYEI*RGQSSECVPST
Trigger: TGTAGAGGGCACACATTCAGAGCTTTGCCCCCTTCAGATTTCATATGAAACCCATGCTGTGACAGCACCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS GCA 72 bp GCCAGGGCTGACAAAGGGTCTTGCTTTTCTCACCACTaGTTAGACATCACTAGCCCTATATCCCATACCAGA +
Preference number: 6 (lower is better)
Translates to: ARADKGSCFSHH*LDITSPISHTR
Trigger: TCTGGTATGGGATATAGGGCTAGTGATGTCTAAGCAGTGGTGAGAAAAGCAAGACCCTTTGTCAGCCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS CCA 72 bp CTGTACACACCTATTTCGTATAAAGTGCCTGCCATCTaGAGCCTCTTTTCTATTGCCCATGCCTCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: LYTPISYKVPAI*SLFSIAHASQP
Trigger: TGGCTGGGAGGCATGGGCAATAGAAAAGAGGCTCCAGATGGCAGGCACTTTATACGAAATAGGTGTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS CAA 90 bp CTCCACCTGCGTTGCTTCCTCACAGTAAATGCCCTGGACTTGCTTTaGGCATTGTACAGCCTCTTGCTTTTCCCCATATCACTTCCTACA +
Preference number: 6 (lower is better)
Translates to: LHLRCFLTVNALDLL*ALYSLLLFPISLPT
Trigger: TGTAGGAAGTGATATGGGGAAAAGCAAGAGGCTGTACAATGCCAAAAGCAAGTCCAGGGCATTTACTGTGAGGAAGCAACGCAGGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS TCA 72 bp TGGAGCGGCTGGCAATTGAGAAGAAGAAGATACAAGTaGGGCTCTTTGCCCTCCCCTATTTGCCAAAAAGCA +
Preference number: 6 (lower is better)
Translates to: WSGWQLRRRRYK*GSLPSPICQKA
Trigger: TGCTTTTTGGCAAATAGGGGAGGGCAAAGAGCCTCACTTGTATCTTCTTCTTCTCAATTGCCAGCCGCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493490.1
CDS GCA 72 bp CATATGAAATCTGAAGGGGGCAAAGCTCTGAATGTGTaGCCTCTACAGGAGTTACTACTGCAGAAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: HMKSEGGKALNV*PLQELLLQKQA
Trigger: TGCCTGCTTCTGCAGTAGTAACTCCTGTAGAGGGCACACATTCAGAGCTTTGCCCCCTTCAGATTTCATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471941.5
CDS CAA 72 bp ACTCGGCAGACAGTCTTCCTTCATCTTCTCTTCCTCTaGTCTGCAGACCTAGAAGTTACTTGCGTCCAGTCA +
Preference number: 6 (lower is better)
Translates to: TRQTVFLHLLFL*SADLEVTCVQS
Trigger: TGACTGGACGCAAGTAACTTCTAGGTCTGCAGACAAGAGGAAGAGAAGATGAAGGAAGACTGTCTGCCGAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340258.10
ENST00000427758.5
ENST00000483709.6
ENST00000489171.5
CDS CAA 72 bp CGTTGCTTCCTCACAGTAAATGCCCTGGACTTGCTTTaGGCATTGTACAGCCTCTTGCTTTTCCCCATATCA +
Preference number: 6 (lower is better)
Translates to: RCFLTVNALDLL*ALYSLLLFPIS
Trigger: TGATATGGGGAAAAGCAAGAGGCTGTACAATGCCAAAAGCAAGTCCAGGGCATTTACTGTGAGGAAGCAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS TCA 72 bp CCAGCCCATATCCAGGACTTACTCATCTTGCATAGCTaGAACATTATATCAGCTGCACAGCAACTCTCCACT +
Preference number: 6 (lower is better)
Translates to: PAHIQDLLILHS*NIISAAQQLST
Trigger: AGTGGAGAGTTGCTGTGCAGCTGATATAATGTTTCAGCTATGCAAGATGAGTAAGTCCTGGATATGGGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp ATAATGAGGCCCTGTACACACCTATTTCGTATAAAGTaGCTGCCATCTGGAGCCTCTTTTCTATTGCCCATG +
Preference number: 6 (lower is better)
Translates to: IMRPCTHLFRIK*LPSGASFLLPM
Trigger: CATGGGCAATAGAAAAGAGGCTCCAGATGGCAGGCACTTTATACGAAATAGGTGTGTACAGGGCCTCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489171.5
CDS GCA 72 bp AACGTTGTCCAGCCCATATCCAGGACTTACTCATCTTaGATAGCTGAAACATTATATCAGCTGCACAGCAAC +
Preference number: 6 (lower is better)
Translates to: NVVQPISRTYSS*IAETLYQLHSN
Trigger: GTTGCTGTGCAGCTGATATAATGTTTCAGCTATGCAAGATGAGTAAGTCCTGGATATGGGCTGGACAACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465735.5
CDS GCA 72 bp ATTTGCCAAAAAGCAGGACATAAATTTGTCAAGGTGTaGCCCCGTCCCTCTCTAGGCAATGATGGAGTTAAT +
Preference number: 6 (lower is better)
Translates to: ICQKAGHKFVKV*PRPSLGNDGVN
Trigger: ATTAACTCCATCATTGCCTAGAGAGGGACGGGGGCACACCTTGACAAATTTATGTCCTGCTTTTTGGCAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493490.1