Pregenerated sensors for RASSF10-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000254670Ensembl transcript IDs: ENST00000533002.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCGTGCCGAGGCGCGGGCTCCACTCCCTGAAGTGGAGGGACCCTTaGATCTTTCCTTGCGTAGGCGCGCGGCAGAGCAGCGATTTGGCG | + |
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Preference number: 5 (lower is better) Translates to: SVPRRGLHSLKWRDP*IFPCVGARQSSDLA Trigger: CGCCAAATCGCTGCTCTGCCGCGCGCCTACGCAAGGAAAGATTCAAGGGTCCCTCCACTTCAGGGAGTGGAGCCCGCGCCTCGGCACGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS GCA 90 bp | GCCTCGGTTTCCCTGTCTGTGCAAAGTGCACTCCCCAGACGCCGCTaGCTCGAGGGACCAGGAAATGCGTCTGGGGGCGCCAGGAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: ASVSLSVQSALPRRR*LEGPGNASGGARKD Trigger: ATCTTTCCTGGCGCCCCCAGACGCATTTCCTGGTCCCTCGAGGCAGCGGCGTCTGGGGAGTGCACTTTGCACAGACAGGGAAACCGAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS TCA 90 bp | ATAGACACAAGCAGAGGAGCCAGTAGGCCAAAGGAGACGCACAGCTaGTCCGTGCCGAGGCGCGGGCTCCACTCCCTGAAGTGGAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: IDTSRGASRPKETHS*SVPRRGLHSLKWRD Trigger: GTCCCTCCACTTCAGGGAGTGGAGCCCGCGCCTCGGCACGGATCAGCTGTGCGTCTCCTTTGGCCTACTGGCTCCTCTGCTTGTGTCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS GCA 90 bp | CCATTGGAGACCGCTGAGTGCCTCGGTTTCCCTGTCTGTGCAAAGTaGACTCCCCAGACGCCGCTGCCTCGAGGGACCAGGAAATGCGTC | + |
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Preference number: 5 (lower is better) Translates to: PLETAECLGFPVCAK*TPQTPLPRGTRKCV Trigger: GACGCATTTCCTGGTCCCTCGAGGCAGCGGCGTCTGGGGAGTGCACTTTGCACAGACAGGGAAACCGAGGCACTCAGCGGTCTCCAATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS GCA 90 bp | TGGTCGTGGAATGCGATTACAGCGTCTCCATTGGAGACCGCTGAGTaGCTCGGTTTCCCTGTCTGTGCAAAGTGCACTCCCCAGACGCCG | + |
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Preference number: 5 (lower is better) Translates to: WSWNAITASPLETAE*LGFPVCAKCTPQTP Trigger: CGGCGTCTGGGGAGTGCACTTTGCACAGACAGGGAAACCGAGGCACTCAGCGGTCTCCAATGGAGACGCTGTAATCGCATTCCACGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CCA 90 bp | GAGGCCTTCCGCTTTAGAGGCAGCGCTTATAGCGCTAGCTGGTCGTaGAATGCGATTACAGCGTCTCCATTGGAGACCGCTGAGTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: EAFRFRGSAYSASWS*NAITASPLETAECL Trigger: GAGGCACTCAGCGGTCTCCAATGGAGACGCTGTAATCGCATTCCACGACCAGCTAGCGCTATAAGCGCTGCCTCTAAAGCGGAAGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CCA 90 bp | GACTGGGAGGCCTTCCGCTTTAGAGGCAGCGCTTATAGCGCTAGCTaGTCGTGGAATGCGATTACAGCGTCTCCATTGGAGACCGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: DWEAFRFRGSAYSAS*SWNAITASPLETAE Trigger: CTCAGCGGTCTCCAATGGAGACGCTGTAATCGCATTCCACGACCAGCTAGCGCTATAAGCGCTGCCTCTAAAGCGGAAGGCCTCCCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS TCA 90 bp | CTGCCTCGAGGGACCAGGAAATGCGTCTGGGGGCGCCAGGAAAGATaGGAAGATAAAGTCACGATGCGTCCAGCTAGCTATAGACACAAG | + |
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Preference number: 5 (lower is better) Translates to: LPRGTRKCVWGRQER*EDKVTMRPASYRHK Trigger: CTTGTGTCTATAGCTAGCTGGACGCATCGTGACTTTATCTTCTCATCTTTCCTGGCGCCCCCAGACGCATTTCCTGGTCCCTCGAGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CCA 90 bp | CTTATAGCGCTAGCTGGTCGTGGAATGCGATTACAGCGTCTCCATTaGAGACCGCTGAGTGCCTCGGTTTCCCTGTCTGTGCAAAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LIALAGRGMRLQRLH*RPLSASVSLSVQSA Trigger: TGCACTTTGCACAGACAGGGAAACCGAGGCACTCAGCGGTCTCCAATGGAGACGCTGTAATCGCATTCCACGACCAGCTAGCGCTATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS GCA 90 bp | AATGCGTCTGGGGGCGCCAGGAAAGATGAGAAGATAAAGTCACGATaGGTCCAGCTAGCTATAGACACAAGCAGAGGAGCCAGTAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: NASGGARKDEKIKSR*VQLAIDTSRGASRP Trigger: TGGCCTACTGGCTCCTCTGCTTGTGTCTATAGCTAGCTGGACGCATCGTGACTTTATCTTCTCATCTTTCCTGGCGCCCCCAGACGCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS GCA 90 bp | TCCAGCCCATACCGTTCCATGCCTGCACTTGCTCCCGGAGCACATTaGCGAATCTTGTTCTCCTTAGATATGCAAATATTGCTTCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: SSPYRSMPALAPGAH*RILFSLDMQILLPV Trigger: GACAGGAAGCAATATTTGCATATCTAAGGAGAACAAGATTCGGCAATGTGCTCCGGGAGCAAGTGCAGGCATGGAACGGTATGGGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CCA 90 bp | TTGTTCTCCTTAGATATGCAAATATTGCTTCCTGTCGAGAAGGACTaGGAGGCCTTCCGCTTTAGAGGCAGCGCTTATAGCGCTAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LFSLDMQILLPVEKD*EAFRFRGSAYSASW Trigger: CCAGCTAGCGCTATAAGCGCTGCCTCTAAAGCGGAAGGCCTCCCAGTCCTTCTCGACAGGAAGCAATATTTGCATATCTAAGGAGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS GCA 72 bp | TCCCTGTCTGTGCAAAGTGCACTCCCCAGACGCCGCTaGCTCGAGGGACCAGGAAATGCGTCTGGGGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SLSVQSALPRRR*LEGPGNASGGA Trigger: GGCGCCCCCAGACGCATTTCCTGGTCCCTCGAGGCAGCGGCGTCTGGGGAGTGCACTTTGCACAGACAGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS TCA 72 bp | AGGCGCGGGCTCCACTCCCTGAAGTGGAGGGACCCTTaGATCTTTCCTTGCGTAGGCGCGCGGCAGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RRGLHSLKWRDP*IFPCVGARQSS Trigger: GCTGCTCTGCCGCGCGCCTACGCAAGGAAAGATTCAAGGGTCCCTCCACTTCAGGGAGTGGAGCCCGCGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS TCA 72 bp | AGCAGAGGAGCCAGTAGGCCAAAGGAGACGCACAGCTaGTCCGTGCCGAGGCGCGGGCTCCACTCCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SRGASRPKETHS*SVPRRGLHSLK Trigger: CTTCAGGGAGTGGAGCCCGCGCCTCGGCACGGATCAGCTGTGCGTCTCCTTTGGCCTACTGGCTCCTCTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 72 bp | GAGGCGCGGGCTCCACTCCCTGAAGTGGAGGGACCCTaGAATCTTTCCTTGCGTAGGCGCGCGGCAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: EARAPLPEVEGP*NLSLRRRAAEQ Trigger: CTGCTCTGCCGCGCGCCTACGCAAGGAAAGATTCAAGGGTCCCTCCACTTCAGGGAGTGGAGCCCGCGCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 90 bp | ATCCGTGCCGAGGCGCGGGCTCCACTCCCTGAAGTGGAGGGACCCTaGAATCTTTCCTTGCGTAGGCGCGCGGCAGAGCAGCGATTTGGC | + |
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Preference number: 6 (lower is better) Translates to: IRAEARAPLPEVEGP*NLSLRRRAAEQRFG Trigger: GCCAAATCGCTGCTCTGCCGCGCGCCTACGCAAGGAAAGATTCAAGGGTCCCTCCACTTCAGGGAGTGGAGCCCGCGCCTCGGCACGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 90 bp | GCGCGGGCTCCACTCCCTGAAGTGGAGGGACCCTTGAATCTTTCCTaGCGTAGGCGCGCGGCAGAGCAGCGATTTGGCGAAAAGGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: ARAPLPEVEGPLNLS*RRRAAEQRFGEKGR Trigger: TCGGCCCTTTTCGCCAAATCGCTGCTCTGCCGCGCGCCTACGCAAGGAAAGATTCAAGGGTCCCTCCACTTCAGGGAGTGGAGCCCGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 72 bp | CCACTCCCTGAAGTGGAGGGACCCTTGAATCTTTCCTaGCGTAGGCGCGCGGCAGAGCAGCGATTTGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: PLPEVEGPLNLS*RRRAAEQRFGE Trigger: TTCGCCAAATCGCTGCTCTGCCGCGCGCCTACGCAAGGAAAGATTCAAGGGTCCCTCCACTTCAGGGAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS GCA 72 bp | GTCCCCCTCCAGCCCATACCGTTCCATGCCTGCACTTaGTCCCGGAGCACATTGCCGAATCTTGTTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VPLQPIPFHACT*SRSTLPNLVLL Trigger: AAGGAGAACAAGATTCGGCAATGTGCTCCGGGAGCAAGTGCAGGCATGGAACGGTATGGGCTGGAGGGGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 72 bp | ATCTTTCCTTGCGTAGGCGCGCGGCAGAGCAGCGATTaGGCGAAAAGGGCCGAGACTCAGGATGCCTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: IFPCVGARQSSD*AKRAETQDACN Trigger: ATTGCAGGCATCCTGAGTCTCGGCCCTTTTCGCCAAATCGCTGCTCTGCCGCGCGCCTACGCAAGGAAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 72 bp | TGTCCCCCTCCAGCCCATACCGTTCCATGCCTGCACTaGCTCCCGGAGCACATTGCCGAATCTTGTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CPPPAHTVPCLH*LPEHIAESCSP Trigger: AGGAGAACAAGATTCGGCAATGTGCTCCGGGAGCAAGTGCAGGCATGGAACGGTATGGGCTGGAGGGGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CCA 72 bp | CTAGCTGGTCGTGGAATGCGATTACAGCGTCTCCATTaGAGACCGCTGAGTGCCTCGGTTTCCCTGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: LAGRGMRLQRLH*RPLSASVSLSV Trigger: CACAGACAGGGAAACCGAGGCACTCAGCGGTCTCCAATGGAGACGCTGTAATCGCATTCCACGACCAGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 72 bp | GCTAGCTGGTCGTGGAATGCGATTACAGCGTCTCCATaGGAGACCGCTGAGTGCCTCGGTTTCCCTGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: ASWSWNAITASP*ETAECLGFPVC Trigger: ACAGACAGGGAAACCGAGGCACTCAGCGGTCTCCAATGGAGACGCTGTAATCGCATTCCACGACCAGCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 90 bp | GCTTATAGCGCTAGCTGGTCGTGGAATGCGATTACAGCGTCTCCATaGGAGACCGCTGAGTGCCTCGGTTTCCCTGTCTGTGCAAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: AYSASWSWNAITASP*ETAECLGFPVCAKC Trigger: GCACTTTGCACAGACAGGGAAACCGAGGCACTCAGCGGTCTCCAATGGAGACGCTGTAATCGCATTCCACGACCAGCTAGCGCTATAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS GCA 72 bp | AATGCGATTACAGCGTCTCCATTGGAGACCGCTGAGTaGCTCGGTTTCCCTGTCTGTGCAAAGTGCACTCCC | + |
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Preference number: 6 (lower is better) Translates to: NAITASPLETAE*LGFPVCAKCTP Trigger: GGGAGTGCACTTTGCACAGACAGGGAAACCGAGGCACTCAGCGGTCTCCAATGGAGACGCTGTAATCGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CCA 72 bp | CGCTTTAGAGGCAGCGCTTATAGCGCTAGCTGGTCGTaGAATGCGATTACAGCGTCTCCATTGGAGACCGCT | + |
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Preference number: 6 (lower is better) Translates to: RFRGSAYSASWS*NAITASPLETA Trigger: AGCGGTCTCCAATGGAGACGCTGTAATCGCATTCCACGACCAGCTAGCGCTATAAGCGCTGCCTCTAAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CCA 72 bp | GCCTTCCGCTTTAGAGGCAGCGCTTATAGCGCTAGCTaGTCGTGGAATGCGATTACAGCGTCTCCATTGGAG | + |
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Preference number: 6 (lower is better) Translates to: AFRFRGSAYSAS*SWNAITASPLE Trigger: CTCCAATGGAGACGCTGTAATCGCATTCCACGACCAGCTAGCGCTATAAGCGCTGCCTCTAAAGCGGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS GCA 72 bp | GGGGGCGCCAGGAAAGATGAGAAGATAAAGTCACGATaGGTCCAGCTAGCTATAGACACAAGCAGAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GGARKDEKIKSR*VQLAIDTSRGA Trigger: GGCTCCTCTGCTTGTGTCTATAGCTAGCTGGACGCATCGTGACTTTATCTTCTCATCTTTCCTGGCGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 90 bp | CTCCAGCCCATACCGTTCCATGCCTGCACTTGCTCCCGGAGCACATaGCCGAATCTTGTTCTCCTTAGATATGCAAATATTGCTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LQPIPFHACTCSRST*PNLVLLRYANIASC Trigger: ACAGGAAGCAATATTTGCATATCTAAGGAGAACAAGATTCGGCAATGTGCTCCGGGAGCAAGTGCAGGCATGGAACGGTATGGGCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 90 bp | TACCGTTCCATGCCTGCACTTGCTCCCGGAGCACATTGCCGAATCTaGTTCTCCTTAGATATGCAAATATTGCTTCCTGTCGAGAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: YRSMPALAPGAHCRI*FSLDMQILLPVEKD Trigger: GTCCTTCTCGACAGGAAGCAATATTTGCATATCTAAGGAGAACAAGATTCGGCAATGTGCTCCGGGAGCAAGTGCAGGCATGGAACGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CCA 72 bp | TTAGATATGCAAATATTGCTTCCTGTCGAGAAGGACTaGGAGGCCTTCCGCTTTAGAGGCAGCGCTTATAGC | + |
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Preference number: 6 (lower is better) Translates to: LDMQILLPVEKD*EAFRFRGSAYS Trigger: GCTATAAGCGCTGCCTCTAAAGCGGAAGGCCTCCCAGTCCTTCTCGACAGGAAGCAATATTTGCATATCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS GCA 72 bp | TACCGTTCCATGCCTGCACTTGCTCCCGGAGCACATTaGCGAATCTTGTTCTCCTTAGATATGCAAATATTG | + |
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Preference number: 6 (lower is better) Translates to: YRSMPALAPGAH*RILFSLDMQIL Trigger: CAATATTTGCATATCTAAGGAGAACAAGATTCGGCAATGTGCTCCGGGAGCAAGTGCAGGCATGGAACGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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| CDS CAA 72 bp | ATACCGTTCCATGCCTGCACTTGCTCCCGGAGCACATaGCCGAATCTTGTTCTCCTTAGATATGCAAATATT | + |
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Preference number: 6 (lower is better) Translates to: IPFHACTCSRST*PNLVLLRYANI Trigger: AATATTTGCATATCTAAGGAGAACAAGATTCGGCAATGTGCTCCGGGAGCAAGTGCAGGCATGGAACGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533002.1 |
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