RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RASGEF1B (Homo sapiens)

Ensembl gene IDs: ENSG00000138670

Ensembl transcript IDs: ENST00000264400.7, ENST00000335927.11, ENST00000436139.6, ENST00000504863.1, ENST00000507538.1, ENST00000508294.1, ENST00000509081.5, ENST00000510780.5, ENST00000512343.5, ENST00000512716.1, ENST00000514050.6, ENST00000514889.1, ENST00000613784.1, ENST00000638048.1

Found 706 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGAAGCAATaGGCAGAACCGCTGAATGGGGGCAGCCTGGGTTCCACCCCAGAG +
Preference number: 1 (lower is better)
Translates to: HFYSGYHTRVPAGKQ*AEPLNGGSLGSTPE
Trigger: CTCTGGGGTGGAACCCAGGCTGCCCCCATTCAGCGGTTCTGCTCATTGCTTCCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR TCA 90 bp GTGTGCTTTGCTGACCCGGGTGCTCCAATGACTGCAGGGTCTTCATaGGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCT +
Preference number: 1 (lower is better)
Translates to: VCFADPGAPMTAGSS*VFVVRDARKQRPAP
Trigger: AGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCAGTCATTGGAGCACCCGGGTCAGCAAAGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR TCA 90 bp TGGGTGCCAAGGGAAGGTCTCTCTGAGGAGAGCCACCTAAGCACGTaGCTGATAAGGAGCCTGAAGCCAAAGAACTGGAGGAAGGACATC +
Preference number: 1 (lower is better)
Translates to: WVPREGLSEESHLST*LIRSLKPKNWRKDI
Trigger: GATGTCCTTCCTCCAGTTCTTTGGCTTCAGGCTCCTTATCAGTCACGTGCTTAGGTGGCTCTCCTCAGAGAGACCTTCCCTTGGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR GCA 90 bp CAGCCTGGGTTCCACCCCAGAGATTCTGATCGACTTGGTCTGCAGTaGACTTGTGTCACATGCTCTGGATGCTCCTCAGCTGATCCTTGT +
Preference number: 1 (lower is better)
Translates to: QPGFHPRDSDRLGLQ*TCVTCSGCSSADPC
Trigger: ACAAGGATCAGCTGAGGAGCATCCAGAGCATGTGACACAAGTGCACTGCAGACCAAGTCGATCAGAATCTCTGGGGTGGAACCCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CCA 90 bp GGAAGAGCAGTGAAAGCCCATAATGGGAGGGGGTATGATCATAGTTaGGTGCCAAGGGAAGGTCTCTCTGAGGAGAGCCACCTAAGCACG +
Preference number: 1 (lower is better)
Translates to: GRAVKAHNGRGYDHS*VPREGLSEESHLST
Trigger: CGTGCTTAGGTGGCTCTCCTCAGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGCTTTCACTGCTCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR GCA 90 bp AGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTaGTGGGAAGCAATGAGCAGAACCGCTGAATGGGGGCAGCCTGGG +
Preference number: 1 (lower is better)
Translates to: SKKLPLLFRVPHKGT*WEAMSRTAEWGQPG
Trigger: CCCAGGCTGCCCCCATTCAGCGGTTCTGCTCATTGCTTCCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CCA 90 bp AAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTaGGAAGCAATGAGCAGAACCGCTGAATGGGGGCAGCCTGGGTTC +
Preference number: 1 (lower is better)
Translates to: KKLPLLFRVPHKGTC*EAMSRTAEWGQPGF
Trigger: GAACCCAGGCTGCCCCCATTCAGCGGTTCTGCTCATTGCTTCCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CCA 90 bp CCCCTCCCTCCACTCCTTTCTTCATTTAAGTTAACAAAAGAAACGTaGGCTTCCTCAGAGCCAGCACTCAGCTGGGCAAGTCCCATTAGC +
Preference number: 1 (lower is better)
Translates to: PLPPLLSSFKLTKET*ASSEPALSWASPIS
Trigger: GCTAATGGGACTTGCCCAGCTGAGTGCTGGCTCTGAGGAAGCCCACGTTTCTTTTGTTAACTTAAATGAAGAAAGGAGTGGAGGGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR TCA 90 bp TGGTCTGCAGTGCACTTGTGTCACATGCTCTGGATGCTCCTCAGCTaGTCCTTGTATAAGCCAAGTGTGAGAAGCAATGCTTTACCAGCA +
Preference number: 1 (lower is better)
Translates to: WSAVHLCHMLWMLLS*SLYKPSVRSNALPA
Trigger: TGCTGGTAAAGCATTGCTTCTCACACTTGGCTTATACAAGGATCAGCTGAGGAGCATCCAGAGCATGTGACACAAGTGCACTGCAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR GCA 90 bp CTATGCCTCAGCTGCTATTCCATGCATGTTATCATTCCTACATCATaGACCTTCTCCTCACCCCTTCCCGGGATCCCTGCAGAAAATACT +
Preference number: 1 (lower is better)
Translates to: LCLSCYSMHVIIPTS*TFSSPLPGIPAENT
Trigger: AGTATTTTCTGCAGGGATCCCGGGAAGGGGTGAGGAGAAGGTGCATGATGTAGGAATGATAACATGCATGGAATAGCAGCTGAGGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CCA 90 bp ATTAACCCAGGAGTGTTGAAAAGAAGCCAGGGTCACAAGGCTGTTTaGCCCTTCTCTCTGTTCTACCCAGCTCTCGAATGGCTTGATTCT +
Preference number: 1 (lower is better)
Translates to: INPGVLKRSQGHKAV*PFSLFYPALEWLDS
Trigger: AGAATCAAGCCATTCGAGAGCTGGGTAGAACAGAGAGAAGGGCCAAACAGCCTTGTGACCCTGGCTTCTTTTCAACACTCCTGGGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR CCA 90 bp AGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTCTaGTCCTGCTTCAAAAAGGATAACCTTGAATTTGTCACAGCTAGT +
Preference number: 1 (lower is better)
Translates to: RASLPSKSQHRIPAL*SCFKKDNLEFVTAS
Trigger: ACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGAAGCAGGACCAGAGGGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR GCA 90 bp ATCCTCGGGAGATTGGTTCCAGGACTTCCCTGGGATTCTAAAATCTaGAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTCAT +
Preference number: 1 (lower is better)
Translates to: ILGRLVPGLPWDSKI*RWSSLRSKMVQYFH
Trigger: ATGAAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATCCCAGGGAAGTCCTGGAACCAATCTCCCGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR TCA 90 bp TCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATaGATAATGTGCAGAGCCGGGATTTTTAGAGGATTCTTTCTCAAG +
Preference number: 1 (lower is better)
Translates to: SIQVQSCDSHGNSRR*IMCRAGIFRGFFLK
Trigger: CTTGAGAAAGAATCCTCTAAAAATCCCGGCTCTGCACATTATTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR TCA 90 bp CTTCGCAAGGTTTCTATCAAGAATATGTTATTAACCCAGGAGTGTTaGAAAGAAGCCAGGGTCACAAGGCTGTTTGGCCCTTCTCTCTGT +
Preference number: 1 (lower is better)
Translates to: LRKVSIKNMLLTQEC*KEARVTRLFGPSLC
Trigger: ACAGAGAGAAGGGCCAAACAGCCTTGTGACCCTGGCTTCTTTTCAACACTCCTGGGTTAATAACATATTCTTGATAGAAACCTTGCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR CCA 90 bp CACAAGGCTGTTTGGCCCTTCTCTCTGTTCTACCCAGCTCTCGAATaGCTTGATTCTGTTAAACAAAAAGACCAATTCTCATCAGGTAAA +
Preference number: 1 (lower is better)
Translates to: HKAVWPFSLFYPALE*LDSVKQKDQFSSGK
Trigger: TTTACCTGATGAGAATTGGTCTTTTTGTTTAACAGAATCAAGCCATTCGAGAGCTGGGTAGAACAGAGAGAAGGGCCAAACAGCCTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR GCA 90 bp ATTGCCAAATGCTTCATCTACTTTTTCCAGGTGAAAGTGTATCTGTaGCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAAC +
Preference number: 1 (lower is better)
Translates to: IAKCFIYFFQVKVYL*LNDLFPEVDLQHGN
Trigger: GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACACTTTCACCTGGAAAAAGTAGATGAAGCATTTGGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CCA 90 bp TGGCCGCAGAGTGTAAAATATATTGATGGCTGTAAAGGGACAACTTaGGGATATTTTAGGTCTGCTGAGATGATGCACAGCATACATACA +
Preference number: 1 (lower is better)
Translates to: WPQSVKYIDGCKGTT*GYFRSAEMMHSIHT
Trigger: TGTATGTATGCTGTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAATATATTTTACACTCTGCGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR CCA 90 bp TCTCTACCTATACTAGAGTCTATCCTTAAATCAACTTCTGAGCACTaGAAGACTTGCCTCATTTTCTCAGTCTTCTCCTCCCCCAAGAAT +
Preference number: 1 (lower is better)
Translates to: SLPILESILKSTSEH*KTCLIFSVFSSPKN
Trigger: ATTCTTGGGGGAGGAGAAGACTGAGAAAATGAGGCAAGTCTTCCAGTGCTCAGAAGTTGATTTAAGGATAGACTCTAGTATAGGTAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR GCA 90 bp ATACTAGAGTCTATCCTTAAATCAACTTCTGAGCACTGGAAGACTTaGCTCATTTTCTCAGTCTTCTCCTCCCCCAAGAATTATCTTTGC +
Preference number: 1 (lower is better)
Translates to: ILESILKSTSEHWKT*LIFSVFSSPKNYLC
Trigger: GCAAAGATAATTCTTGGGGGAGGAGAAGACTGAGAAAATGAGGCAAGTCTTCCAGTGCTCAGAAGTTGATTTAAGGATAGACTCTAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR TCA 90 bp ACTCAGATAAACCAGCTGGCAAGTGTGGATTTGAATTCTGAATACTaGATAGAAGCAGCTAAAGAAACAACATCTCCCTGTGAAACCCAA +
Preference number: 1 (lower is better)
Translates to: TQINQLASVDLNSEY*IEAAKETTSPCETQ
Trigger: TTGGGTTTCACAGGGAGATGTTGTTTCTTTAGCTGCTTCTATTCAGTATTCAGAATTCAAATCCACACTTGCCAGCTGGTTTATCTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR TCA 90 bp AACTGGCTTGTCTTCTTATCTCCTCTTTTCATGCTCAAAACCATCTaGACTTCGCAAGGTTTCTATCAAGAATATGTTATTAACCCAGGA +
Preference number: 1 (lower is better)
Translates to: NWLVFLSPLFMLKTI*TSQGFYQEYVINPG
Trigger: TCCTGGGTTAATAACATATTCTTGATAGAAACCTTGCGAAGTTCAGATGGTTTTGAGCATGAAAAGAGGAGATAAGAAGACAAGCCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR TCA 90 bp TCTCCTCCCCCAAGAATTATCTTTGCTAATTTACACATGAATCTATaGACTCAGCTTCTATCCAGGAAGGTATGTTGTAAACACCATAAA +
Preference number: 1 (lower is better)
Translates to: SPPPRIIFANLHMNL*TQLLSRKVCCKHHK
Trigger: TTTATGGTGTTTACAACATACCTTCCTGGATAGAAGCTGAGTTCATAGATTCATGTGTAAATTAGCAAAGATAATTCTTGGGGGAGGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CAA 90 bp CTGAATGGGGGCAGCCTGGGTTCCACCCCAGAGATTCTGATCGACTaGGTCTGCAGTGCACTTGTGTCACATGCTCTGGATGCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: LNGGSLGSTPEILID*VCSALVSHALDAPQ
Trigger: CTGAGGAGCATCCAGAGCATGTGACACAAGTGCACTGCAGACCAAGTCGATCAGAATCTCTGGGGTGGAACCCAGGCTGCCCCCATTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR TCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCACCCGGGTGCTCCAATaGCTGCAGGGTCTTCATGAG +
Preference number: 2 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLTRVLQ*LQGLHE
Trigger: CTCATGAAGACCCTGCAGTCATTGGAGCACCCGGGT...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR CCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCGAGCCAGCACTCAGCTaGGCAAGTCCCATTAGCAGC +
Preference number: 2 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLEPALS*ASPISS
Trigger: GCTGCTAATGGGACTTGCCCAGCTGAGTGCTGGCTC...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAAACTGCAGGGTCTTCATaGGTGTTCGTGGTACGAGAT +
Preference number: 2 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQTAGSS*VFVVRD
Trigger: ATCTCGTACCACGAACACTCATGAAGACCCTGCAGT...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACACCCGGGTGCTCCAATaGCTGCAGGGTCTTCATGAG +
Preference number: 2 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHTRVLQ*LQGLHE
Trigger: CTCATGAAGACCCTGCAGTCATTGGAGCACCCGGGT...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR-3UTR CCA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACGAGCCAGCACTCAGCTaGGCAAGTCCCATTAGCAGC +
Preference number: 2 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHEPALS*ASPISS
Trigger: GCTGCTAATGGGACTTGCCCAGCTGAGTGCTGGCTC...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR-3UTR TCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCACTCCCGACTTCAGGTaGTCTGCCTGCTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFTPDFR*SACFSL
Trigger: GAGGCTGAAGCAGGCAGATCACCTGAAGTCGGGAGT...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCTTGCCCAGGCTGGAGTaGAATGGCACGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFLPRLE*NGTILA
Trigger: AGCCAAGATCGTGCCATTGCACTCCAGCCTGGGCAA...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR CCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAACTTCATGAGTGTTCGTaGTACGAGATGCCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQLHECS*YEMPEN
Trigger: GTTTTCTGGCATCTCGTACCACGAACACTCATGAAG...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTTCTCCATCTGGTCTTaGGTGAGCTTGTGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLFSIWS*VSLCAL
Trigger: CAAAGCACACAAGCTCACTCAAGACCAGATGGAGAA...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR GCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTGTTCGTGGTACGAGATaGCAGAAAACAAAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SASNQSYPSLAILIELRFVRGTR*QKTKAS
Trigger: GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAAC...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR GCA 90 bp CAAAAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGATTGAGTGAGCTTGTGTaGTTTGCTGACCCGGGTGCT +
Preference number: 2 (lower is better)
Translates to: QKKTPSRCRAVIHMEIPGLSELV*FADPGA
Trigger: AGCACCCGGGTCAGCAAAGCACACAAGCTCACTCAA...TCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR GCA 90 bp ACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGAAAACTCCATCCAGGTaGAGAGCTGTGATTCACATG +
Preference number: 2 (lower is better)
Translates to: TKGKQSLQSASNQSYPSLKTPSR*RAVIHM
Trigger: CATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT...CAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAACTCAAGTGTCTTCAGTaGACATTTCAGTCTCACAAA +
Preference number: 2 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQLKCLQ*TFQSHK
Trigger: TTTGTGAGACTGAAATGTTCACTGAAGACACTTGAG...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTTCACTGAGCCAGCACTaGCCCTGCCAAGGAACTCCA +
Preference number: 2 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFSLSQH*PCQGTP
Trigger: TGGAGTTCCTTGGCAGGGTCAGTGCTGGCTCAGTGA...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR GCA 90 bp TATTTTAGGTCTGCTGAGATGATGCACAGCATACATACATGCTCTAGTTTTTGGAGCCCCTCCATGATCTaGAGGAAGCAGCAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: YFRSAEMMHSIHTCSSFWSPSMI*RKQQQQ
Trigger: CTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGGCT...CCAAAAACTAGAGCATGTATGTATGCTGTGCATCATCTCAGCAGACCTAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR-3UTR GCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTAGCCCCTCCATGATCTaGAGGAAGCAGCAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: HFSLTKSESICQLQEISSSPSMI*RKQQQQ
Trigger: CTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGGCT...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR GCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCCTACAAGGGCATCCTTaGCCAGCAAGTCTCAACACA +
Preference number: 2 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFLQGHP*PASLNT
Trigger: TGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAG...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGCTACAAGGGCATCCTTaGCCAGCAAGTCTCAACACA +
Preference number: 2 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGLQGHP*PASLNT
Trigger: TGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAG...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp GACTCAGGAAATGACTCATTCGGCCCGGCAGAAATAATGGCTGTCTCGAGCACTTATCAAGTTATACGTTaGAGCACACCACTGAAAGAG +
Preference number: 2 (lower is better)
Translates to: DSGNDSFGPAEIMAVSSTYQVIR*STPLKE
Trigger: CTCTTTCAGTGGTGTGCTGCAACGTATAACTTGATA...AGTGCTCGAGACAGCCATTATTTCTGCCGGGCCGAATGAGTCATTTCCTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR TCA 90 bp ACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGCTCAAGTGTCTTCAGTaGACATTTCAGTCTCACAAA +
Preference number: 2 (lower is better)
Translates to: TKGKQSLQSASNQSYPSLLKCLQ*TFQSHK
Trigger: TTTGTGAGACTGAAATGTTCACTGAAGACACTTGAG...CAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGGGATGCAGTGAGCCATaGTCGCAACTCTACACTCTA +
Preference number: 2 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRGCSEP*SQLYTL
Trigger: TAGAGTGTAGAGTTGCGATCATGGCTCACTGCATCC...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGTTCGTGGTACGAGATaGCAGAAAACAAAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: VFSEHFSLTKSESICQLQVRGTR*QKTKAS
Trigger: GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAAC...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR CCA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACCTTCATGAGTGTTCGTaGTACGAGATGCCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHLHECS*YEMPEN
Trigger: GTTTTCTGGCATCTCGTACCACGAACACTCATGAAG...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR-3UTR CCA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTTAACAAAAGAAACGTaGGCTTCCTCAGAGCCAGCA +
Preference number: 2 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSLTKET*ASSEPA
Trigger: TGCTGGCTCTGAGGAAGCCCACGTTTCTTTTGTTAA...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR CCA 90 bp ACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTCTGGTATTTCCCTTTTACCTaGAACTTAAACTCATACCAC +
Preference number: 2 (lower is better)
Translates to: TTRASLPSKSQHRIPALWYFPFT*NLNSYH
Trigger: GTGGTATGAGTTTAAGTTCCAGGTAAAAGGGAAATA...CCAGAGGGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CAA 90 bp ACTTCGCAAGGTTTCTATCAAGAATATGTTATTAACCCAGGAGTGTaGAAAAGAAGCCAGGGTCACAAGGCTGTTTGGCCCTTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: TSQGFYQEYVINPGV*KRSQGHKAVWPFSL
Trigger: CAGAGAGAAGGGCCAAACAGCCTTGTGACCCTGGCTTCTTTTCAACACTCCTGGGTTAATAACATATTCTTGATAGAAACCTTGCGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR TCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGTTCTCCATCTGGTCTTaGGTGAGCTTGTGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: VFSEHFSLTKSESICQLQFSIWS*VSLCAL
Trigger: CAAAGCACACAAGCTCACTCAAGACCAGATGGAGAA...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATCAGTCTCACAAAATCTaGGTCTATCTGTCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDQSHKI*VYLSAA
Trigger: TGCAGCTGACAGATAGACTCAGATTTTGTGAGACTG...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR GCA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTAAGCCCCTCCATGATCTaGAGGAAGCAGCAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLSPSMI*RKQQQQ
Trigger: CTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGGCT...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR GCA 90 bp AGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCATCTGGGTGCTCCAATGACTaGAGGGTCTTCATGAGTGTT +
Preference number: 2 (lower is better)
Translates to: SLTKSESICQLQEISSPSGCSND*RVFMSV
Trigger: AACACTCATGAAGACCCTGCAGTCATTGGAGCACCC...AGATGGAGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR GCA 90 bp TATTTTAGGTCTGCTGAGATGATGCACAGCATACATACATGCTCTAGTTTTTGGTTGAGTGAGCTTGTGTaGTTTGCTGACCCGGGTGCT +
Preference number: 2 (lower is better)
Translates to: YFRSAEMMHSIHTCSSFWLSELV*FADPGA
Trigger: AGCACCCGGGTCAGCAAAGCACACAAGCTCACTCAA...CCAAAAACTAGAGCATGTATGTATGCTGTGCATCATCTCAGCAGACCTAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR-3UTR GCA 90 bp AAAAGTCCCAGGCAAGAAGCAACAAATCCCAACCCAGACCCATATTCCTTCCAAGTGAAAGTGTATCTGTaGCTGAATGACTTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: KSPRQEATNPNPDPYSFQVKVYL*LNDLFP
Trigger: TGGGAACAAGTCATTCAGGCACAGATACACTTTCAC...TTGGAAGGAATATGGGTCTGGGTTGGGATTTGTTGCTTCTTGCCTGGGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACCTTGAGCCCAAAAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: SFTVSKACLQEQPTTICYLEPKS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCCAACTTTTGGGCTCAAG...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CAA 90 bp TTCATCTACTTTTTCCAGGTGAAAGTGTATCTGTGCCTGAATGACTaGTTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATC +
Preference number: 2 (lower is better)
Translates to: FIYFFQVKVYLCLND*FPEVDLQHGNYKGI
Trigger: GATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACACTTTCACCTGGAAAAAGTAGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR TCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGCTTGTTCCCAGAAGTTaGCCTGCAACATGGAAACTA +
Preference number: 2 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRLVPRS*PATWKL
Trigger: TAGTTTCCATGTTGCAGGTCAACTTCTGGGAACAAG...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR TCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACGTTGCAGCACACCACTaGAAGAGTTCTCAAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SFTVSKACLQEQPTTICYVAAHH*KSSQGR
Trigger: CCTTCCTTGAGAACTCTTTCAGTGGTGTGCTGCAAC...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGGAGCACTGGAAGACTTaGCTCATTTTCTCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTREHWKT*LIFSVF
Trigger: GAAGACTGAGAAAATGAGGCAAGTCTTCCAGTGCTC...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGTCCCAGAAGTTGACCTaGAACATGGAAACTACAAGG +
Preference number: 2 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRSQKLT*NMETTR
Trigger: CCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGA...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCGTGAAAGTGTATCTGTaGCTGAATGACTTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFVKVYL*LNDLFP
Trigger: TGGGAACAAGTCATTCAGGCACAGATACACTTTCAC...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACGATCTCCCCTTTGACTaGCGCAACAACAAGGACCAT +
Preference number: 2 (lower is better)
Translates to: SFTVSKACLQEQPTTICYDLPFD*RNNKDH
Trigger: ATGGTCCTTGTTGTTGCGGCAGTCAAAGGGGAGATC...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCTATTTCCCTTTTACCTaGAACTTAAACTCATACCAC +
Preference number: 2 (lower is better)
Translates to: METTRASLPSKSQHRIPAYFPFT*NLNSYH
Trigger: GTGGTATGAGTTTAAGTTCCAGGTAAAAGGGAAATA...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR CCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGAGAATACCAGCCCTCTaGTCCTGCTTCAAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRRIPAL*SCFKKD
Trigger: ATCCTTTTTGAAGCAGGACCAGAGGGCTGGTATTCT...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR CCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCCTATCAATTCATACCTaGCTAGAACCTGTAAGAGGC +
Preference number: 2 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFLSIHT*LEPVRG
Trigger: GCCTCTTACAGGTTCTAGCCAGGTATGAATTGATAG...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR CAA 90 bp AACACCTGTATACATAGGAGCAGCGCCGGAAGGATACACACAAAATaGACAACACTTGTTACCTTTAAGAGAGAAGCTGGATTGAATGGA +
Preference number: 2 (lower is better)
Translates to: NTCIHRSSAGRIHTK*TTLVTFKREAGLNG
Trigger: TCCATTCAATCCAGCTTCTCTCTTAAAGGTAACAAGTGTTGTCAATTTTGTGTGTATCCTTCCGGCGCTGCTCCTATGTATACAGGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR TCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTACTGCAGGGTCTTCATaGGTGTTCGTGGTACGAGAT +
Preference number: 2 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESTAGSS*VFVVRD
Trigger: ATCTCGTACCACGAACACTCATGAAGACCCTGCAGT...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAACTCAAGTGTCTTCAGTaGACATTTCAGTCTCACAAA +
Preference number: 2 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDELKCLQ*TFQSHK
Trigger: TTTGTGAGACTGAAATGTTCACTGAAGACACTTGAG...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGTTACACATGAATCTATaGACTCAGCTTCTATCCAGG +
Preference number: 2 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGLHMNL*TQLLSR
Trigger: CCTGGATAGAAGCTGAGTTCATAGATTCATGTGTAA...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR TCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACCTGAGGTGGGAGGATTaGTTAAGCCAGAGAAGTCAA +
Preference number: 2 (lower is better)
Translates to: SFTVSKACLQEQPTTICYLRWED*LSQRSQ
Trigger: TTGACTTCTCTGGCTTAATCAATCCTCCCACCTCAG...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATTGAGTGAGCTTGTGTaGTTTGCTGACCCGGGTGCT +
Preference number: 2 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLLSELV*FADPGA
Trigger: AGCACCCGGGTCAGCAAAGCACACAAGCTCACTCAA...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR GCA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACAATATAATGGCTGTTTaGAGAGCGACTACAGACTTA +
Preference number: 2 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHNIMAV*RATTDL
Trigger: TAAGTCTGTAGTCGCTCTGCAAACAGCCATTATATT...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR-3UTR TCA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTAACTGCAGGGTCTTCATaGGTGTTCGTGGTACGAGAT +
Preference number: 2 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLTAGSS*VFVVRD
Trigger: ATCTCGTACCACGAACACTCATGAAGACCCTGCAGT...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTTTCTCCATCTGGTCTTaGGTGAGCTTGTGTGCTTTG +
Preference number: 2 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESFSIWS*VSLCAL
Trigger: CAAAGCACACAAGCTCACTCAAGACCAGATGGAGAA...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR TCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTCTTGTTCCCAGAAGTTaGCCTGCAACATGGAAACTA +
Preference number: 2 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVLVPRS*PATWKL
Trigger: TAGTTTCCATGTTGCAGGTCAACTTCTGGGAACAAG...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR TCA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGAACAACATCTCCCTGTaGAACCCAACCCGATCAAGG +
Preference number: 2 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMNNISL*NPTRSR
Trigger: CCTTGATCGGGTTGGGTTTCACAGGGAGATGTTGTT...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR GCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACGAGCACTGGAAGACTTaGCTCATTTTCTCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: SFTVSKACLQEQPTTICYEHWKT*LIFSVF
Trigger: GAAGACTGAGAAAATGAGGCAAGTCTTCCAGTGCTC...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTTCCCAGAAGTTGACCTaGAACATGGAAACTACAAGG +
Preference number: 2 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFSQKLT*NMETTR
Trigger: CCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGA...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR TCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGTACAAAACTGCACCATaGTGCTTAACTTTTGCCTTT +
Preference number: 2 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRYKTAP*CLTFAF
Trigger: AAAGGCAAAAGTTAAGCATCATGGTGCAGTTTTGTA...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR GCA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACAGCATACATACATaGTCTAGTTTTTGGAACCAT +
Preference number: 2 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMHSIHT*SSFWNH
Trigger: ATGGTTCCAAAAACTAGAGCATGTATGTATGCTGTG...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR-3UTR GCA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGATGATCATAGTTGGGTaGCAAGGGAAGGTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMMIIVG*QGKVSL
Trigger: CAGAGAGACCTTCCCTTGGCACCCAACTATGATCAT...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CCA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTTCAACTTCTGAGCACTaGAAGACTTGCCTCATTTTC +
Preference number: 2 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFSTSEH*KTCLIF
Trigger: GAAAATGAGGCAAGTCTTCCAGTGCTCAGAAGTTGA...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR TCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTATGCTCAAAACCATCTaGACTTCGCAAGGTTTCTAT +
Preference number: 2 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVMLKTI*TSQGFY
Trigger: ATAGAAACCTTGCGAAGTTCAGATGGTTTTGAGCAT...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR GCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACTATCAAGTTATACGTTaGAGCACACCACTGAAAGAG +
Preference number: 2 (lower is better)
Translates to: SFTVSKACLQEQPTTICYYQVIR*STPLKE
Trigger: CTCTTTCAGTGGTGTGCTGCAACGTATAACTTGATA...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CAA 90 bp TCATTTCATGTTTCTTGCAGGCAAGTCCTAATAAACCACTTCATTTaGGGCAAATCCCCAGGGGAGAAACATATTATGCCAAATTATGTA +
Preference number: 2 (lower is better)
Translates to: SFHVSCRQVLINHFI*GKSPGEKHIMPNYV
Trigger: TACATAATTTGGCATAATATGTTTCTCCCCTGGGGATTTGCCCAAAATGAAGTGGTTTATTAGGACTTGCCTGCAAGAAACATGAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGTCAACTTCTGAGCACTaGAAGACTTGCCTCATTTTC +
Preference number: 2 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRSTSEH*KTCLIF
Trigger: GAAAATGAGGCAAGTCTTCCAGTGCTCAGAAGTTGA...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR GCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTTATCTCCTCTTTTCATaGTCAAAACCATCTGAACTT +
Preference number: 2 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVYLLFS*SKPSEL
Trigger: AAGTTCAGATGGTTTTGAGCATGAAAAGAGGAGATA...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CCA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGGCTGTCTCGAGCACTTaGGTTCATCATAATATAATG +
Preference number: 2 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMAVSST*VHHNIM
Trigger: CATTATATTATGATGAACCCAAGTGCTCGAGACAGC...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR CAA 90 bp ATTAGATCAACCATTGAGTTAACAGCAAGGTGTTTTTCATCTGTTTaGTTTACTGCTATAGTGGGGACAGGTAACTTCTCCAATTTATTC +
Preference number: 2 (lower is better)
Translates to: IRSTIELTARCFSSV*FTAIVGTGNFSNLF
Trigger: GAATAAATTGGAGAAGTTACCTGTCCCCACTATAGCAGTAAACAAAACAGATGAAAAACACCTTGCTGTTAACTCAATGGTTGATCTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR TCA 72 bp TCAGGGTACCACACAAGGGTACCTGCTGGGAAGCAATaGGCAGAACCGCTGAATGGGGGCAGCCTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: SGYHTRVPAGKQ*AEPLNGGSLGS
Trigger: GGAACCCAGGCTGCCCCCATTCAGCGGTTCTGCTCATTGCTTCCCAGCAGGTACCCTTGTGTGGTACCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR TCA 72 bp GTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATaGTCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: VRDARKQRPAPP*SAGSSSSSRQA
Trigger: TGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR TCA 72 bp GTGAGCTTGTGTGCTTTGCTGACCCGGGTGCTCCAATaGCTGCAGGGTCTTCATGAGTGTTCGTGGTACGAG +
Preference number: 3 (lower is better)
Translates to: VSLCALLTRVLQ*LQGLHECSWYE
Trigger: CTCGTACCACGAACACTCATGAAGACCCTGCAGTCATTGGAGCACCCGGGTCAGCAAAGCACACAAGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR CCA 72 bp CCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTaGGAAGCAATGAGCAGAACCGCTGAATGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: PLLFRVPHKGTC*EAMSRTAEWGQ
Trigger: CTGCCCCCATTCAGCGGTTCTGCTCATTGCTTCCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR CAA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAAGTGAGCTTGTGTGCTTaGCTGACCCGGGTGCTCCAA +
Preference number: 3 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQVSLCA*LTRVLQ
Trigger: TTGGAGCACCCGGGTCAGCAAAGCACACAAGCTCAC...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR TCA 72 bp GCTGACCCGGGTGCTCCAATGACTGCAGGGTCTTCATaGGTGTTCGTGGTACGAGATGCCAGAAAACAAAGG +
Preference number: 3 (lower is better)
Translates to: ADPGAPMTAGSS*VFVVRDARKQR
Trigger: CCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCAGTCATTGGAGCACCCGGGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR TCA 72 bp AGGGAAGGTCTCTCTGAGGAGAGCCACCTAAGCACGTaGCTGATAAGGAGCCTGAAGCCAAAGAACTGGAGG +
Preference number: 3 (lower is better)
Translates to: REGLSEESHLST*LIRSLKPKNWR
Trigger: CCTCCAGTTCTTTGGCTTCAGGCTCCTTATCAGTCACGTGCTTAGGTGGCTCTCCTCAGAGAGACCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR GCA 72 bp GACTGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATaGCAGAAAACAAAGGCCAGCCCCTCCATGATCTGC +
Preference number: 3 (lower is better)
Translates to: DCRVFMSVRGTR*QKTKASPSMIC
Trigger: GCAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR GCA 72 bp CTGGGTTCCACCCCAGAGATTCTGATCGACTTGGTCTaGAGTGCACTTGTGTCACATGCTCTGGATGCTCCT +
Preference number: 3 (lower is better)
Translates to: LGSTPEILIDLV*SALVSHALDAP
Trigger: AGGAGCATCCAGAGCATGTGACACAAGTGCACTGCAGACCAAGTCGATCAGAATCTCTGGGGTGGAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CCA 72 bp GTGAAAGCCCATAATGGGAGGGGGTATGATCATAGTTaGGTGCCAAGGGAAGGTCTCTCTGAGGAGAGCCAC +
Preference number: 3 (lower is better)
Translates to: VKAHNGRGYDHS*VPREGLSEESH
Trigger: GTGGCTCTCCTCAGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGCTTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR TCA 72 bp CTGTCAGCTGCAGGAAATAAGTTCTCCATCTGGTCTTaGGTGAGCTTGTGTGCTTTGCTGACCCGGGTGCTC +
Preference number: 3 (lower is better)
Translates to: LSAAGNKFSIWS*VSLCALLTRVL
Trigger: GAGCACCCGGGTCAGCAAAGCACACAAGCTCACTCAAGACCAGATGGAGAACTTATTTCCTGCAGCTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR TCA 72 bp CTTCAGATACATAAACCAAGGTCACTGAGCCAGCACTaGCCCTGCCAAGGAACTCCACGGCTAACCCCTCTA +
Preference number: 3 (lower is better)
Translates to: LQIHKPRSLSQH*PCQGTPRLTPL
Trigger: TAGAGGGGTTAGCCGTGGAGTTCCTTGGCAGGGTCAGTGCTGGCTCAGTGACCTTGGTTTATGTATCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR GCA 72 bp TTCCACCCCAGAGATTCTGATCGACTTGGTCTGCAGTaGACTTGTGTCACATGCTCTGGATGCTCCTCAGCT +
Preference number: 3 (lower is better)
Translates to: FHPRDSDRLGLQ*TCVTCSGCSSA
Trigger: AGCTGAGGAGCATCCAGAGCATGTGACACAAGTGCACTGCAGACCAAGTCGATCAGAATCTCTGGGGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR GCA 72 bp AGCTGCTATTCCATGCATGTTATCATTCCTACATCATaGACCTTCTCCTCACCCCTTCCCGGGATCCCTGCA +
Preference number: 3 (lower is better)
Translates to: SCYSMHVIIPTS*TFSSPLPGIPA
Trigger: TGCAGGGATCCCGGGAAGGGGTGAGGAGAAGGTGCATGATGTAGGAATGATAACATGCATGGAATAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CCA 72 bp CTCAGTATCCTCGGGAGATTGGTTCCAGGACTTCCCTaGGATTCTAAAATCTGCAGATGGTCAAGTCTCCGC +
Preference number: 3 (lower is better)
Translates to: LSILGRLVPGLP*DSKICRWSSLR
Trigger: GCGGAGACTTGACCATCTGCAGATTTTAGAATCCCAGGGAAGTCCTGGAACCAATCTCCCGAGGATACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CAA 90 bp AAAAGTCCCAGGCAAGAAGCAACAAATCCCAACCCAGACCCATATTCCTTCCAAGCCAAGGCCAGTGGATaGCTTGAGCCCAAAAGTTGG +
Preference number: 3 (lower is better)
Translates to: KSPRQEATNPNPDPYSFQAKASG*LEPKSW
Trigger: CCAACTTTTGGGCTCAAGCAATCCACTGGCCTTGGC...TTGGAAGGAATATGGGTCTGGGTTGGGATTTGTTGCTTCTTGCCTGGGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR TCA 72 bp GGAGGATTGATTAAGCCAGAGAAGTCAAGGATGCAGTaGGCCATGATCGCAACTCTACACTCTAGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: GGLIKPEKSRMQ*AMIATLHSSLR
Trigger: CCTCAGGCTAGAGTGTAGAGTTGCGATCATGGCTCACTGCATCCTTGACTTCTCTGGCTTAATCAATCCTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR CAA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGTGAGCTTGTGTGCTTaGCTGACCCGGGTGCTCCAA +
Preference number: 3 (lower is better)
Translates to: VFSEHFSLTKSESICQLQVSLCA*LTRVLQ
Trigger: TTGGAGCACCCGGGTCAGCAAAGCACACAAGCTCAC...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR CAA 90 bp GCCCATAATGGGAGGGGGTATGATCATAGTTGGGTGCCAAGGGAAGGTCTCTCTGTATCAAGTTATACGTaGCAGCACACCACTGAAAGA +
Preference number: 3 (lower is better)
Translates to: AHNGRGYDHSWVPREGLSVSSYT*QHTTER
Trigger: TCTTTCAGTGGTGTGCTGCAACGTATAACTTGATAC...AGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR TCA 72 bp GTGCACTTGTGTCACATGCTCTGGATGCTCCTCAGCTaGTCCTTGTATAAGCCAAGTGTGAGAAGCAATGCT +
Preference number: 3 (lower is better)
Translates to: VHLCHMLWMLLS*SLYKPSVRSNA
Trigger: AGCATTGCTTCTCACACTTGGCTTATACAAGGATCAGCTGAGGAGCATCCAGAGCATGTGACACAAGTGCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR CAA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGCTGTGCCTGAATGACTaGTTCCCAGAAGTTGACCTG +
Preference number: 3 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGLCLND*FPEVDL
Trigger: CAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAG...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR CAA 90 bp AAAAGTCCCAGGCAAGAAGCAACAAATCCCAACCCAGACCCATATTCCTTCCAAATTAACCCAGGAGTGTaGAAAAGAAGCCAGGGTCAC +
Preference number: 3 (lower is better)
Translates to: KSPRQEATNPNPDPYSFQINPGV*KRSQGH
Trigger: GTGACCCTGGCTTCTTTTCAACACTCCTGGGTTAAT...TTGGAAGGAATATGGGTCTGGGTTGGGATTTGTTGCTTCTTGCCTGGGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR GCA 72 bp AGATTGGTTCCAGGACTTCCCTGGGATTCTAAAATCTaGAGATGGTCAAGTCTCCGCTCTAAGATGGTACAG +
Preference number: 3 (lower is better)
Translates to: RLVPGLPWDSKI*RWSSLRSKMVQ
Trigger: CTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATCCCAGGGAAGTCCTGGAACCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CAA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGTTCTCCATCTGGTCTaGAGTGAGCTTGTGTGCTTT +
Preference number: 3 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDVLHLV*SELVCF
Trigger: AAAGCACACAAGCTCACTCAAGACCAGATGGAGAAC...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR CAA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGTGGGTAAAAAGGAGTTaGCTAACCAGCAGCCAACTC +
Preference number: 3 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMWVKRS*LTSSQL
Trigger: GAGTTGGCTGCTGGTTAGCAAACTCCTTTTTACCCA...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR GCA 72 bp AGCAAGTCTCAACACAGAATACCAGCCCTCTGGTCCTaGTTCAAAAAGGATAACCTTGAATTTGTCACAGCT +
Preference number: 3 (lower is better)
Translates to: SKSQHRIPALWS*FKKDNLEFVTA
Trigger: AGCTGTGACAAATTCAAGGTTATCCTTTTTGAAGCAGGACCAGAGGGCTGGTATTCTGTGTTGAGACTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CCA 72 bp GTTCCAGGACTTCCCTGGGATTCTAAAATCTGCAGATaGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTT +
Preference number: 3 (lower is better)
Translates to: VPGLPWDSKICR*SSLRSKMVQYF
Trigger: AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATCCCAGGGAAGTCCTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CAA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACAAATATAATGGCTGTTaGCAGAGCGACTACAGACTT +
Preference number: 3 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHKYNGC*QSDYRL
Trigger: AAGTCTGTAGTCGCTCTGCAAACAGCCATTATATTT...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR-3UTR CAA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGGTATCAAGTTATACGTaGCAGCACACCACTGAAAGA +
Preference number: 3 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGVSSYT*QHTTER
Trigger: TCTTTCAGTGGTGTGCTGCAACGTATAACTTGATAC...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR CAA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACGCTGAGGTGGGAGGATaGATTAAGCCAGAGAAGTCA +
Preference number: 3 (lower is better)
Translates to: SFTVSKACLQEQPTTICYAEVGG*IKPEKS
Trigger: TGACTTCTCTGGCTTAATCAATCCTCCCACCTCAGC...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR-3UTR CAA 90 bp AAAAGTCCCAGGCAAGAAGCAACAAATCCCAACCCAGACCCATATTCCTTCCAAGATGTCACTGATCTTTaGAGCAGCTTCAGATACATA +
Preference number: 3 (lower is better)
Translates to: KSPRQEATNPNPDPYSFQDVTDL*SSFRYI
Trigger: TATGTATCTGAAGCTGCTCAAAAGATCAGTGACATC...TTGGAAGGAATATGGGTCTGGGTTGGGATTTGTTGCTTCTTGCCTGGGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CAA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCGTTTCCTGCTGCCAGTaGATTCCATTTGAGAAATCA +
Preference number: 3 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFVSCCQ*IPFEKS
Trigger: TGATTTCTCAAATGGAATCAACTGGCAGCAGGAAAC...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR TCA 72 bp GTTTCTATCAAGAATATGTTATTAACCCAGGAGTGTTaGAAAGAAGCCAGGGTCACAAGGCTGTTTGGCCCT +
Preference number: 3 (lower is better)
Translates to: VSIKNMLLTQEC*KEARVTRLFGP
Trigger: AGGGCCAAACAGCCTTGTGACCCTGGCTTCTTTTCAACACTCCTGGGTTAATAACATATTCTTGATAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR TCA 72 bp TACATAGGAGCAGCGCCGGAAGGATACACACAAAATTaGCAACACTTGTTACCTTTAAGAGAGAAGCTGGAT +
Preference number: 3 (lower is better)
Translates to: YIGAAPEGYTQN*QHLLPLREKLD
Trigger: ATCCAGCTTCTCTCTTAAAGGTAACAAGTGTTGTCAATTTTGTGTGTATCCTTCCGGCGCTGCTCCTATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR GCA 72 bp TGCTTCATCTACTTTTTCCAGGTGAAAGTGTATCTGTaGCTGAATGACTTGTTCCCAGAAGTTGACCTGCAA +
Preference number: 3 (lower is better)
Translates to: CFIYFFQVKVYL*LNDLFPEVDLQ
Trigger: TTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACACTTTCACCTGGAAAAAGTAGATGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CCA 72 bp CTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATaGTACAGTATTTTCATACAACATCCGCACATCCTC +
Preference number: 3 (lower is better)
Translates to: LKSADGQVSALR*YSIFIQHPHIL
Trigger: GAGGATGTGCGGATGTTGTATGAAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CAA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTAAAATGATCTCCCCTTaGACTGCCGCAACAACAAGG +
Preference number: 3 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVKMISP*TAATTR
Trigger: CCTTGTTGTTGCGGCAGTCAAAGGGGAGATCATTTT...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR-3UTR CAA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTGTTCTCCATCTGGTCTaGAGTGAGCTTGTGTGCTTT +
Preference number: 3 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESVLHLV*SELVCF
Trigger: AAAGCACACAAGCTCACTCAAGACCAGATGGAGAAC...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR-3UTR CAA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACACTTGTTCCCAGAAGTaGACCTGCAACATGGAAACT +
Preference number: 3 (lower is better)
Translates to: SFTVSKACLQEQPTTICYTCSQK*TCNMET
Trigger: AGTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGT...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR TCA 72 bp AACCAGCTGGCAAGTGTGGATTTGAATTCTGAATACTaGATAGAAGCAGCTAAAGAAACAACATCTCCCTGT +
Preference number: 3 (lower is better)
Translates to: NQLASVDLNSEY*IEAAKETTSPC
Trigger: ACAGGGAGATGTTGTTTCTTTAGCTGCTTCTATTCAGTATTCAGAATTCAAATCCACACTTGCCAGCTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR CCA 72 bp AGTGTAAAATATATTGATGGCTGTAAAGGGACAACTTaGGGATATTTTAGGTCTGCTGAGATGATGCACAGC +
Preference number: 3 (lower is better)
Translates to: SVKYIDGCKGTT*GYFRSAEMMHS
Trigger: GCTGTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAATATATTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR-3UTR CAA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGACTTGTTCCCAGAAGTaGACCTGCAACATGGAAACT +
Preference number: 3 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMTCSQK*TCNMET
Trigger: AGTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGT...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR GCA 72 bp TTTAGGTCTGCTGAGATGATGCACAGCATACATACATaGTCTAGTTTTTGGAACCATGTCATTAAGTTTTCA +
Preference number: 3 (lower is better)
Translates to: FRSAEMMHSIHT*SSFWNHVIKFS
Trigger: TGAAAACTTAATGACATGGTTCCAAAAACTAGAGCATGTATGTATGCTGTGCATCATCTCAGCAGACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
3UTR GCA 72 bp GATTTACTACAAAACTGCACCATGATGCTTAACTTTTaGCTTTGTAAGCAAGGGACCTATCAATTCATACCT +
Preference number: 3 (lower is better)
Translates to: DLLQNCTMMLNF*LCKQGTYQFIP
Trigger: AGGTATGAATTGATAGGTCCCTTGCTTACAAAGGCAAAAGTTAAGCATCATGGTGCAGTTTTGTAGTAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
3UTR GCA 72 bp AAATATTTATTATTCTATGCCTCAGCTGCTATTCCATaGATGTTATCATTCCTACATCATGCACCTTCTCCT +
Preference number: 3 (lower is better)
Translates to: KYLLFYASAAIP*MLSFLHHAPSP
Trigger: AGGAGAAGGTGCATGATGTAGGAATGATAACATGCATGGAATAGCAGCTGAGGCATAGAATAATAAATATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GCCCATAATGGGAGGGGGTATGATCATAGTTGGGTGCCAAGGGAAGGTCTCTCTCCTCGGCCTCCCGGCTaGGTGCCGCGCGCCCACAAA +
Preference number: 4 (lower is better)
Translates to: AHNGRGYDHSWVPREGLSPRPPG*VPRAHK
Trigger: TTTGTGGGCGCGCGGCACGCAGCCGGGAGGCCGAGG...AGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTCTTCTTCGTACTGGCTaGGCGCAGCAAGCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCLLRTG*AQQACG
Trigger: TCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAG...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATGGCCTCCCGGCTGCGTaGCGCGCGCCCACAAATGCG +
Preference number: 4 (lower is better)
Translates to: HECSWYEMPENKGQPLHDGLPAA*RAPTNA
Trigger: CGCATTTGTGGGCGCGCGGCACGCAGCCGGGAGGCC...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000335927.11
CDS-3UTR GCA 90 bp ACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTCTGGCCGCGCGCCCACAAATaGGACCAAAGGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TTRASLPSKSQHRIPALWPRAHK*DQRTGS
Trigger: GCTCCCTGTCCTTTGGTCGCATTTGTGGGCGCGCGG...CCAGAGGGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTCCTCGGCCTCCCGGCTaGGTGCCGCGCGCCCACAAA +
Preference number: 4 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSPRPPG*VPRAHK
Trigger: TTTGTGGGCGCGCGGCACGCAGCCGGGAGGCCGAGG...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264400.7
CDS-3UTR GCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACCCTCGGCCTCCCGGCTaGGTGCCGCGCGCCCACAAA +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNPRPPG*VPRAHK
Trigger: TTTGTGGGCGCGCGGCACGCAGCCGGGAGGCCGAGG...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTACTGTGAGCAGATACTaGAAGATCTTCCGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCTVSRY*KIFRSL
Trigger: GAGGGACCGGAAGATCTTGCAGTATCTGCTCACAGT...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTGTTCGTGGTACGAGATaGCAGAAAACAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCVRGTR*QKTKAS
Trigger: GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAAC...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCTTGCTCGGCAACGTaGAGCCCAGGAGCTCGGCGA +
Preference number: 4 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASPCSAT*SPGARR
Trigger: TCGCCGAGCTCCTGGGCTGCACGTTGCCGAGCAAGG...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR CCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTATGTCTCTTCGCCACTaGCTATTCGGTGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCMSLRH*LFGEPD
Trigger: ATCTGGCTCACCGAATAGCCAGTGGCGAAGAGACAT...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335927.11
ENST00000509081.5
CDS-3UTR TCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTTTTCCGTCCATTCCGTaGGGAGTTGAAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCFPSIP*GVEGFW
Trigger: CCAAAATCCTTCAACTCCTCACGGAATGGACGGAAA...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp ACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGTGGGAGAGGCGCCCTTaGTCGGCAACGTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TKGKQSLQSASNQSYPSLWERRP*SATCSP
Trigger: TGGGCTGCACGTTGCCGAGCAAGGGCGCCTCTCCCA...CAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR CCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCACCCAGGCTCTGCCTaGGAATTCCAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAHPGSA*EFQQPR
Trigger: GCGCGGCTGCTGGAATTCCCAGGCAGAGCCTGGGTG...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCACCCGGGTGCTCCAATaGCTGCAGGGTCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLTRVLQ*LQGLHE
Trigger: CTCATGAAGACCCTGCAGTCATTGGAGCACCCGGGT...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGCCGAGGCGACTCAACTaGGCTCTGGCAAAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLPRRLN*ALAKAR
Trigger: CCTTGCTTTTGCCAGAGCTCAGTTGAGTCGCCTCGG...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR GCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCAGCCCCTCCATGATCTaGAGGAAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLSPSMI*RKQQQQ
Trigger: CTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGGCT...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp TCAGAATATGGTGTCAGAGGTTGTAAGGAAGAGCAGGTTGTAAGGAAGGGCAGGCCTTGCTCGGCAACGTaGAGCCCAGGAGCTCGGCGA +
Preference number: 4 (lower is better)
Translates to: SEYGVRGCKEEQVVRKGRPCSAT*SPGARR
Trigger: TCGCCGAGCTCCTGGGCTGCACGTTGCCGAGCAAGG...CCTGCCCTTCCTTACAACCTGCTCTTCCTTACAACCTCTGACACCATATTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR CCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCGAGCCAGCACTCAGCTaGGCAAGTCCCATTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLEPALS*ASPISS
Trigger: GCTGCTAATGGGACTTGCCCAGCTGAGTGCTGGCTC...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAACTTCTTCGTACTGGCTaGGCGCAGCAAGCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQLLRTG*AQQACG
Trigger: TCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAG...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATACCCGGGTGCTCCAATaGCTGCAGGGTCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: HECSWYEMPENKGQPLHDTRVLQ*LQGLHE
Trigger: CTCATGAAGACCCTGCAGTCATTGGAGCACCCGGGT...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTTCTGGCAATACTGATTaGGCTAAGGTTTGGGATCTA +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCSGNTD*AKVWDL
Trigger: TAGATCCCAAACCTTAGCTCAATCAGTATTGCCAGA...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GACTCAGGAAATGACTCATTCGGCCCGGCAGAAATAATGGCTGTCTCGAGCACTCCCGATCAAGGCAGGTaGCATCTCTCCACTCAACCC +
Preference number: 4 (lower is better)
Translates to: DSGNDSFGPAEIMAVSSTPDQGR*HLSTQP
Trigger: GGGTTGAGTGGAGAGATGTCACCTGCCTTGATCGGG...AGTGCTCGAGACAGCCATTATTTCTGCCGGGCCGAATGAGTCATTTCCTGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGTCGGTGGCGAGTATGTaGCTTCTGTTCCCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLSVASM*LLFPCP
Trigger: GGGACAAGGGAACAGAAGTCACATACTCGCCACCGA...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR GCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTTTCTTTCTGTATGTCTaGTCTTCGCCACTGGCTATT +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCFFLYV*SSPLAI
Trigger: AATAGCCAGTGGCGAAGAGCAGACATACAGAAAGAA...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000638048.1
CDS-3UTR GCA 90 bp GGGAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGTATGGGAGAGGCGCCCTTaGTCGGCAACGTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRSLRHTFLFQNMVSEVVWERRP*SATCSP
Trigger: TGGGCTGCACGTTGCCGAGCAAGGGCGCCTCTCCCA...TACAACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR GCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTAGCAAACTGGAGTTATaGTGCTGTACATGGAAGGTT +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCSKLEL*CCTWKV
Trigger: AACCTTCCATGTACAGCAGCATAACTCCAGTTTGCT...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR CCA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCGAGCCAGCACTCAGCTaGGCAAGTCCCATTAGCAGC +
Preference number: 4 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASEPALS*ASPISS
Trigger: GCTGCTAATGGGACTTGCCCAGCTGAGTGCTGGCTC...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCGTACTAAGTGCTGGATaGGTGCTTCCAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPVLSAG*VLPGIQ
Trigger: CTGGATCCCTGGAAGCACTCATCCAGCACTTAGTAC...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCGTGAACACCGAAGGATaGCAGCACATCACCTTGTCG +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLVNTEG*QHITLS
Trigger: CGACAAGGTGATGTGCTGTCATCCTTCGGTGTTCAC...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR TCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTGATTCCCCAGGCAGGTaGCCCGAGGCGACTCAACTG +
Preference number: 4 (lower is better)
Translates to: SASNQSYPSLAILIELRFDSPGR*PEATQL
Trigger: CAGTTGAGTCGCCTCGGGTCACCTGCCTGGGGAATC...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR GCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACCCGCGCGCCCACAAATaGGACCAAAGGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNPRAHK*DQRTGS
Trigger: GCTCCCTGTCCTTTGGTCGCATTTGTGGGCGCGCGG...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCTCTGCTCTTCGCCACTaGCTATTCGGTGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPSALRH*LFGEPD
Trigger: ATCTGGCTCACCGAATAGCCAGTGGCGAAGAGCAGA...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000638048.1
CDS-3UTR CCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGAGGACTTCTTCGTACTaGCTGAGCGCAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLRTSSY*LSAASL
Trigger: CAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGTCCT...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCAGGACTTCTTCGTACTaGCTGAGCGCAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSRTSSY*LSAASL
Trigger: CAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGTCCT...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCATACTTTCCTGCAGGTaGACTCCGAGTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAILSCR*TPSPRP
Trigger: AGGCCGAGGACTCGGAGTTCACCTGCAGGAAAGTAT...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp ACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTCTGGGCTGTCAAACATTGCTaGAAAGGGAGGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: TTRASLPSKSQHRIPALWAVKHC*KGRSLR
Trigger: CCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGC...CCAGAGGGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCCTTCTTCGTACTGGCTaGGCGCAGCAAGCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLLLRTG*AQQACG
Trigger: TCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAG...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCACTGCAGGGTCTTCATaGGTGTTCGTGGTACGAGAT +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPTAGSS*VFVVRD
Trigger: ATCTCGTACCACGAACACTCATGAAGACCCTGCAGT...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCGGAAATTCCAGGAGATaGATAATGTGCAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLGNSRR*IMCRAG
Trigger: CCCGGCTCTGCACATTATTCATCTCCTGGAATTTCC...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCGGAAATTCCAGGAGATaGATAATGTGCAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPGNSRR*IMCRAG
Trigger: CCCGGCTCTGCACATTATTCATCTCCTGGAATTTCC...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AGGGAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGTGCCATATACAAGCGGTaGGGCAGGGTCCCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: REESEAYFPLSEYGVRGCAIYKR*GRVPPD
Trigger: ATCGGGAGGGACCCTGCCTCACCGCTTGTATATGGC...ACAACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR GCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTCCTCGGCCTCCCGGCTaGGTGCCGCGCGCCCACAAA +
Preference number: 4 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESPRPPG*VPRAHK
Trigger: TTTGTGGGCGCGCGGCACGCAGCCGGGAGGCCGAGG...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000335927.11
CDS-3UTR GCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGTCCACAGCTGTCCTCTaGAGACTGATAGAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLSTAVL*RLIEVS
Trigger: CGAAACCTCTATCAGTCTGCAGAGGACAGCTGTGGA...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCACTGTGAGCAGATACTaGAAGATCTTCCGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPTVSRY*KIFRSL
Trigger: GAGGGACCGGAAGATCTTGCAGTATCTGCTCACAGT...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCAGCCCCTCCATGATCTaGAGGAAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLSPSMI*RKQQQQ
Trigger: CTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGGCT...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCGTTCGTGGTACGAGATaGCAGAAAACAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLVRGTR*QKTKAS
Trigger: GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAAC...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATTTGAGTGAGCTTGTGTaGTTTGCTGACCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: HECSWYEMPENKGQPLHDLSELV*FADPGA
Trigger: AGCACCCGGGTCAGCAAAGCACACAAGCTCACTCAA...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTGGAGTTGAAGGATTTTaGGTGCAATTTTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCGVEGF*VQFFSS
Trigger: AGATGAGAAAAATTGCACCCAAAATCCTTCAACTCC...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTTCTCATCTGGTTATCTaGATAGTAATCCACATTAGG +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCSHLVI*IVIHIR
Trigger: CCTAATGTGGATTACTATCCAGATAACCAGATGAGA...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335927.11
CDS-3UTR CCA 90 bp GCCCATAATGGGAGGGGGTATGATCATAGTTGGGTGCCAAGGGAAGGTCTCTCTGCAATGGCACGATCTTaGCTCACCACAATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: AHNGRGYDHSWVPREGLSAMARS*LTTISA
Trigger: GGCAGAAATTGTGGTGAGCCAAGATCGTGCCATTGC...AGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAAGCTGTCAAACATTGCTaGAAAGGGAGGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQAVKHC*KGRSLR
Trigger: CCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGC...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGTTTCCGTCCATTCCGTaGGGAGTTGAAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLFPSIP*GVEGFW
Trigger: CCAAAATCCTTCAACTCCTCACGGAATGGACGGAAA...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCACTGCAGGGTCTTCATaGGTGTTCGTGGTACGAGAT +
Preference number: 4 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASTAGSS*VFVVRD
Trigger: ATCTCGTACCACGAACACTCATGAAGACCCTGCAGT...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATACTGCAGGGTCTTCATaGGTGTTCGTGGTACGAGAT +
Preference number: 4 (lower is better)
Translates to: HECSWYEMPENKGQPLHDTAGSS*VFVVRD
Trigger: ATCTCGTACCACGAACACTCATGAAGACCCTGCAGT...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGTTCTCCATCTGGTCTTaGGTGAGCTTGTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLFSIWS*VSLCAL
Trigger: CAAAGCACACAAGCTCACTCAAGACCAGATGGAGAA...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAAGAAAAGGGAGGAGTCTaGGGCATACTTTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQEKGGV*GILSSS
Trigger: GCTAGAGGAAAGTATGCCTCAGACTCCTCCCTTTTC...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR GCA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTTTGAAGGATTTTGGGTaGAATTTTTCTCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCLKDFG*NFSHLV
Trigger: AACCAGATGAGAAAAATTGCACCCAAAATCCTTCAA...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCAGGGGAAACAAAGTCTaGAGTCAGCTTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPRGNKV*SQLPTS
Trigger: ACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGAGGGGAAACAAAGTCTaGAGTCAGCTTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLRGNKV*SQLPTS
Trigger: ACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GACTCAGGAAATGACTCATTCGGCCCGGCAGAAATAATGGCTGTCTCGAGCACTCTACAAGGGCATCCTTaGCCAGCAAGTCTCAACACA +
Preference number: 4 (lower is better)
Translates to: DSGNDSFGPAEIMAVSSTLQGHP*PASLNT
Trigger: TGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAG...AGTGCTCGAGACAGCCATTATTTCTGCCGGGCCGAATGAGTCATTTCCTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCGACTTCAGGTGATCTaGCTGCTTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPARLQVI*LLQPPK
Trigger: TTTGGGAGGCTGAAGCAGGCAGATCACCTGAAGTCG...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCCACACAAGGGTACCTaGTGGGAAGCAATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAPHKGT*WEAMSR
Trigger: TCTGCTCATTGCTTCCCAGCAGGTACCCTTGTGTGG...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCATGTCTCTTCGCCACTaGCTATTCGGTGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASMSLRH*LFGEPD
Trigger: ATCTGGCTCACCGAATAGCCAGTGGCGAAGAGACAT...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335927.11
ENST00000509081.5
CDS-3UTR CCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTTGAGCCCAAAAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPALEPKS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCCAACTTTTGGGCTCAAG...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCCATTCCGTGAGGAGTTaGAGGATTTTGGGTGCAATT +
Preference number: 4 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSHSVRS*RILGAI
Trigger: AATTGCACCCAAAATCCTTCAACTCCTCACGGAATG...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCCACTGGCTATTCGGTaGGCCAGATCTTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLPLAIR*ARSFKF
Trigger: AAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGG...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCCACTGGCTATTCGGTaGGCCAGATCTTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPPLAIR*ARSFKF
Trigger: AAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGG...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGTGGATGTGGAGCTaGTTTTTGCCAGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: HECSWYEMPENKGQPLHDLWMWS*FLPGLL
Trigger: AAGAAGTCCTGGCAAAAATCAGCTCCACATCCACAG...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCTGGCCCAATATAATTaGGCCTCTCCAGCTCTATAT +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLLAQYN*ASPALY
Trigger: ATATAGAGCTGGAGAGGCTCAATTATATTGGGCCAG...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATTCTCCATCTGGTCTTaGGTGAGCTTGTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQFSIWS*VSLCAL
Trigger: CAAAGCACACAAGCTCACTCAAGACCAGATGGAGAA...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCAGTCTCACAAAATCTaGGTCTATCTGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLQSHKI*VYLSAA
Trigger: TGCAGCTGACAGATAGACTCAGATTTTGTGAGACTG...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AAAAGTCCCAGGCAAGAAGCAACAAATCCCAACCCAGACCCATATTCCTTCCAAATAAACCAAGGTCACTaGGCCAGCACTGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: KSPRQEATNPNPDPYSFQINQGH*ASTDPA
Trigger: GGCAGGGTCAGTGCTGGCTCAGTGACCTTGGTTTAT...TTGGAAGGAATATGGGTCTGGGTTGGGATTTGTTGCTTCTTGCCTGGGACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGACTCCCGACTTCAGGTaGTCTGCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGTPDFR*SACFSL
Trigger: GAGGCTGAAGCAGGCAGATCACCTGAAGTCGGGAGT...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGAATGAGCAGAACCGCTaGATGGGGGCAGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGNEQNR*MGAAWV
Trigger: AACCCAGGCTGCCCCCATTCAGCGGTTCTGCTCATT...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCCCTGCTGGGAAGCAATaGGCAGAACCGCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFPAGKQ*AEPLNG
Trigger: CCCATTCAGCGGTTCTGCTCATTGCTTCCCAGCAGG...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCAGGCCAACTCGGGAATaGCTTTTAGACTCAAACATG +
Preference number: 4 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSRPTRE*LLDSNM
Trigger: CATGTTTGAGTCTAAAAGTCATTCCCGAGTTGGCCT...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR GCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCACATTAGGTACTAAGTaGTGGATGAGTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPTLGTK*WMSASR
Trigger: CCTGGAAGCACTCATCCAGCACTTAGTACCTAATGT...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCTTGCGGATCAGACACTaGATCATTTGCTGGACATTC +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLLRIRH*IICWTF
Trigger: GAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAA...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCTTGCGGATCAGACACTaGATCATTTGCTGGACATTC +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPLRIRH*IICWTF
Trigger: GAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAA...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCCATGTGTTAAACTCTaGCTAAGAGGCTCGACCTTA +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPPCVKL*LRGSTL
Trigger: TAAGGTCGAGCCTCTTAGGCAGAGTTTAACACATGG...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAAAGCCCCTCCATGATCTaGAGGAAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDESPSMI*RKQQQQ
Trigger: CTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGGCT...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp ACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTCTGGGAGCACTGGAAGACTTaGCTCATTTTCTCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: TTRASLPSKSQHRIPALWEHWKT*LIFSVF
Trigger: GAAGACTGAGAAAATGAGGCAAGTCTTCCAGTGCTC...CCAGAGGGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GCCCATAATGGGAGGGGGTATGATCATAGTTGGGTGCCAAGGGAAGGTCTCTCTTCCCAGAAGTTGACCTaGAACATGGAAACTACAAGG +
Preference number: 4 (lower is better)
Translates to: AHNGRGYDHSWVPREGLSSQKLT*NMETTR
Trigger: CCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGA...AGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCGATCTCCCCTTTGACTaGCGCAACAACAAGGACCAT +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPADLPFD*RNNKDH
Trigger: ATGGTCCTTGTTGTTGCGGCAGTCAAAGGGGAGATC...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCTTAGGTACTAAGTGCTaGATGAGTGCTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLLGTKC*MSASRD
Trigger: ATCCCTGGAAGCACTCATCCAGCACTTAGTACCTAA...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGCTTCATGAGTGTTCGTaGTACGAGATGCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLLHECS*YEMPEN
Trigger: GTTTTCTGGCATCTCGTACCACGAACACTCATGAAG...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCTTAACAAAAGAAACGTaGGCTTCCTCAGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPLTKET*ASSEPA
Trigger: TGCTGGCTCTGAGGAAGCCCACGTTTCTTTTGTTAA...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GCCCATAATGGGAGGGGGTATGATCATAGTTGGGTGCCAAGGGAAGGTCTCTCTAGAATACCAGCCCTCTaGTCCTGCTTCAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: AHNGRGYDHSWVPREGLSRIPAL*SCFKKD
Trigger: ATCCTTTTTGAAGCAGGACCAGAGGGCTGGTATTCT...AGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAAATACTTTCCTGCAGGTaGACTCCGAGTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDEILSCR*TPSPRP
Trigger: AGGCCGAGGACTCGGAGTTCACCTGCAGGAAAGTAT...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264400.7
CDS-3UTR TCA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTGTACTAAGTGCTGGATaGGTGCTTCCAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSVLSAG*VLPGIQ
Trigger: CTGGATCCCTGGAAGCACTCATCCAGCACTTAGTAC...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATAGTACTAAGTGCTGGATaGGTGCTTCCAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: CNMETTRASLPSKSQHRIVLSAG*VLPGIQ
Trigger: CTGGATCCCTGGAAGCACTCATCCAGCACTTAGTAC...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCATTCCGTGAGGAGTTaGAGGATTTTGGGTGCAATT +
Preference number: 4 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASHSVRS*RILGAI
Trigger: AATTGCACCCAAAATCCTTCAACTCCTCACGGAATG...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCATTCCGTGAGGAGTTaGAGGATTTTGGGTGCAATT +
Preference number: 4 (lower is better)
Translates to: HECSWYEMPENKGQPLHDHSVRS*RILGAI
Trigger: AATTGCACCCAAAATCCTTCAACTCCTCACGGAATG...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAATTTCCGTCCATTCCGTaGGGAGTTGAAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: FPEVDLQHGNYKGILAQQFPSIP*GVEGFW
Trigger: CCAAAATCCTTCAACTCCTCACGGAATGGACGGAAA...TTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCTTCTTCGTACTGGCTaGGCGCAGCAAGCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMLLRTG*AQQACG
Trigger: TCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAG...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR TCA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCCCCGAGCTACGTCAATaGAATACTCAATCATTCTTG +
Preference number: 4 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSPELRQ*NTQSFL
Trigger: CAAGAATGATTGAGTATTTCATTGACGTAGCTCGGG...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAACAGTCTCACAAAATCTaGGTCTATCTGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQQSHKI*VYLSAA
Trigger: TGCAGCTGACAGATAGACTCAGATTTTGTGAGACTG...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCTCTGGCAATACTGATTaGGCTAAGGTTTGGGATCTA +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLSGNTD*AKVWDL
Trigger: TAGATCCCAAACCTTAGCTCAATCAGTATTGCCAGA...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAACTGAGGTGGGAGGATTaGTTAAGCCAGAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: FPEVDLQHGNYKGILAQQLRWED*LSQRSQ
Trigger: TTGACTTCTCTGGCTTAATCAATCCTCCCACCTCAG...TTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GCCCATAATGGGAGGGGGTATGATCATAGTTGGGTGCCAAGGGAAGGTCTCTCTACAACAACTAGTGTGTaGGCATGTGAGAGAGTGTAT +
Preference number: 4 (lower is better)
Translates to: AHNGRGYDHSWVPREGLSTTTSV*ACERVY
Trigger: ATACACTCTCTCACATGCTCACACACTAGTTGTTGT...AGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCTGGATGCTCCTCAGCTaGTCCTTGTATAAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAWMLLS*SLYKPS
Trigger: ACTTGGCTTATACAAGGATCAGCTGAGGAGCATCCA...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGAATGAGCAGAACCGCTaGATGGGGGCAGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRNEQNR*MGAAWV
Trigger: AACCCAGGCTGCCCCCATTCAGCGGTTCTGCTCATT...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGCCTGCTGGGAAGCAATaGGCAGAACCGCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRPAGKQ*AEPLNG
Trigger: CCCATTCAGCGGTTCTGCTCATTGCTTCCCAGCAGG...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCCTTTTGCTTGGTGCTTaGTTTCAGGCCAACTCGGGA +
Preference number: 4 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLLLLGA*FQANSG
Trigger: TCCCGAGTTGGCCTGAAATCAAGCACCAAGCAAAAG...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR TCA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATCCCAAGTTTGCCAGGTaGACACCGAAGGATGACAGC +
Preference number: 4 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDPKFAR*TPKDDS
Trigger: GCTGTCATCCTTCGGTGTTCACCTGGCAAACTTGGG...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR GCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCGCGCGCCCACAAATaGGACCAAAGGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HFSLTKSESICQLQEISSPRAHK*DQRTGS
Trigger: GCTCCCTGTCCTTTGGTCGCATTTGTGGGCGCGCGG...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000335927.11
CDS-3UTR GCA 90 bp GACTCAGGAAATGACTCATTCGGCCCGGCAGAAATAATGGCTGTCTCGAGCACTACATTAGGTACTAAGTaGTGGATGAGTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: DSGNDSFGPAEIMAVSSTTLGTK*WMSASR
Trigger: CCTGGAAGCACTCATCCAGCACTTAGTACCTAATGT...AGTGCTCGAGACAGCCATTATTTCTGCCGGGCCGAATGAGTCATTTCCTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCTCACTTAGTCTCTGGTaGTCAACACATAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLSLSLW*STHKWQ
Trigger: TTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGA...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCTCACTTAGTCTCTGGTaGTCAACACATAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPSLSLW*STHKWQ
Trigger: TTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGA...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCTTCTTTCTGTATGTCTaGTCTTCGCCACTGGCTATT +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLFFLYV*SSPLAI
Trigger: AATAGCCAGTGGCGAAGAGCAGACATACAGAAAGAA...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000638048.1
CDS-3UTR GCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCGGGTGCTCCAATGACTaGAGGGTCTTCATGAGTGTT +
Preference number: 4 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLGCSND*RVFMSV
Trigger: AACACTCATGAAGACCCTGCAGTCATTGGAGCACCC...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACTTGAGTGAGCTTGTGTaGTTTGCTGACCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHLSELV*FADPGA
Trigger: AGCACCCGGGTCAGCAAAGCACACAAGCTCACTCAA...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCAAAACTCCATCCAGGTaGAGAGCTGTGATTCACATG +
Preference number: 4 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASKTPSR*RAVIHM
Trigger: CATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp TTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAATGATCATAGTTGGGTaGCAAGGGAAGGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPEVDLQHGNYKGILAQQMIIVG*QGKVSL
Trigger: CAGAGAGACCTTCCCTTGGCACCCAACTATGATCAT...TTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGAAACTGGAGTTATGCTaGTGTACATGGAAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLKLELC*CTWKVS
Trigger: GGAAACCTTCCATGTACAGCAGCATAACTCCAGTTT...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR CCA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGGAGCCAGCACTCAGCTaGGCAAGTCCCATTAGCAGC +
Preference number: 4 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMEPALS*ASPISS
Trigger: GCTGCTAATGGGACTTGCCCAGCTGAGTGCTGGCTC...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATTAACAAAAGAAACGTaGGCTTCCTCAGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQLTKET*ASSEPA
Trigger: TGCTGGCTCTGAGGAAGCCCACGTTTCTTTTGTTAA...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACCAACCTCTTCGCCACTaGCTATTCGGTGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNQPLRH*LFGEPD
Trigger: ATCTGGCTCACCGAATAGCCAGTGGCGAAGAGGTTG...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTGAAGCCAAAGAACTaGAGGAAGGACATCGATCAC +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPALKPKN*RKDIDH
Trigger: GTGATCGATGTCCTTCCTCCAGTTCTTTGGCTTCAG...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAAGAAAAGGGAGGAGTCTaGGGCATACTTTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDEEKGGV*GILSCR
Trigger: CCTGCAGGAAAGTATGCCTCAGACTCCTCCCTTTTC...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264400.7
CDS-3UTR TCA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAAGTACTAAGTGCTGGATaGGTGCTTCCAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDEVLSAG*VLPGIQ
Trigger: CTGGATCCCTGGAAGCACTCATCCAGCACTTAGTAC...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAACATTCCGTGAGGAGTTaGAGGATTTTGGGTGCAATT +
Preference number: 4 (lower is better)
Translates to: FPEVDLQHGNYKGILAQQHSVRS*RILGAI
Trigger: AATTGCACCCAAAATCCTTCAACTCCTCACGGAATG...TTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCCACTGGCTATTCGGTaGGCCAGATCTTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAPLAIR*ARSFKF
Trigger: AAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGG...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCGAGCTACGTCAATaGAATACTCAATCATTCTTG +
Preference number: 4 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASPELRQ*NTQSFL
Trigger: CAAGAATGATTGAGTATTTCATTGACGTAGCTCGGG...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGATTATAGAAATTGCTTaGAGGGTCCATCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLIIEIA*RVHLML
Trigger: GAGCATCAGATGGACCCTTCAAGCAATTTCTATAAT...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCAAAATTTCTCAAAATTaGCATGGCCATTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLKISQN*HGHWEG
Trigger: GCCTTCCCAATGGCCATGTCAATTTTGAGAAATTTT...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTGTCTTTCTCTATATaGTTTTCAGGTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPLSFSI*FSGPSL
Trigger: GAGTGAAGGACCTGAAAATCATATAGAGAAAGACAG...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTGGAAATTCCAGGAGATaGATAATGTGCAGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSGNSRR*IMCRAG
Trigger: CCCGGCTCTGCACATTATTCATCTCCTGGAATTTCC...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATTTAGGTCTGCTGAGATaGTGCACAGCATACATACAT +
Preference number: 4 (lower is better)
Translates to: HECSWYEMPENKGQPLHDLGLLR*CTAYIH
Trigger: ATGTATGTATGCTGTGCATCATCTCAGCAGACCTAA...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR TCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCACACAGTTTCAGAGCTaGAAGGGCATTAACACAAGG +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPATQFQS*KGINTR
Trigger: CCTTGTGTTAATGCCCTTTCAGCTCTGAAACTGTGT...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTCCACAGCTGTCCTCTaGAGACTGATAGAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSSTAVL*RLIEVS
Trigger: CGAAACCTCTATCAGTCTGCAGAGGACAGCTGTGGA...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTGTTCGTGGTACGAGATaGCAGAAAACAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSVRGTR*QKTKAS
Trigger: GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAAC...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCGAGCACTGGAAGACTTaGCTCATTTTCTCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAEHWKT*LIFSVF
Trigger: GAAGACTGAGAAAATGAGGCAAGTCTTCCAGTGCTC...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCTCCCAGAAGTTGACCTaGAACATGGAAACTACAAGG +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPASQKLT*NMETTR
Trigger: CCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGA...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp ACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTCTGGTATCAAGTTATACGTTaGAGCACACCACTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TTRASLPSKSQHRIPALWYQVIR*STPLKE
Trigger: CTCTTTCAGTGGTGTGCTGCAACGTATAACTTGATA...CCAGAGGGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGCGACTTCAGGTGATCTaGCTGCTTCAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGRLQVI*LLQPPK
Trigger: TTTGGGAGGCTGAAGCAGGCAGATCACCTGAAGTCG...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp TTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAATTAGGTACTAAGTGCTaGATGAGTGCTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: FPEVDLQHGNYKGILAQQLGTKC*MSASRD
Trigger: ATCCCTGGAAGCACTCATCCAGCACTTAGTACCTAA...TTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCGGATCACTTAGTCTCTaGTGCTCAACACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAGSLSL*CSTHKW
Trigger: CCACTTATGTGTTGAGCACCAGAGACTAAGTGATCC...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATTCTGCTCTTCGCCACTaGCTATTCGGTGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDSALRH*LFGEPD
Trigger: ATCTGGCTCACCGAATAGCCAGTGGCGAAGAGCAGA...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000638048.1
CDS-3UTR CCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCACTGCATCATTTGCTaGACATTCTTTCTGTATGTC +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLHCIIC*TFFLYV
Trigger: GACATACAGAAAGAATGTCCAGCAAATGATGCAGTG...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCTGTAAAGGGACAACTTaGGGATATTTTAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSCKGTT*GYFRSA
Trigger: AGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACA...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGCACCCAGGCTCTGCCTaGGAATTCCAGCAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRHPGSA*EFQQPR
Trigger: GCGCGGCTGCTGGAATTCCCAGGCAGAGCCTGGGTG...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATAGACCAATATGTGATGTaGAGGGCTTGCCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: CNMETTRASLPSKSQHRIDQYVM*RACPKA
Trigger: TGCCTTTGGGCAAGCCCTCCACATCACATATTGGTC...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp ACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTCTGGTACCCAGCTCTCGAATaGCTTGATTCTGTTAAACAA +
Preference number: 4 (lower is better)
Translates to: TTRASLPSKSQHRIPALWYPALE*LDSVKQ
Trigger: TTGTTTAACAGAATCAAGCCATTCGAGAGCTGGGTA...CCAGAGGGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACGGGTATGATCATAGTTaGGTGCCAAGGGAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNGYDHS*VPREGL
Trigger: GAGACCTTCCCTTGGCACCCAACTATGATCATACCC...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp TTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGGTTGGTTGAACCCATaGATGCAGATCCCACAAATA +
Preference number: 4 (lower is better)
Translates to: FPEVDLQHGNYKGILAQQGWLNP*MQIPQI
Trigger: TATTTGTGGGATCTGCATCCATGGGTTCAACCAACC...TTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp GACTCAGGAAATGACTCATTCGGCCCGGCAGAAATAATGGCTGTCTCGAGCACTTCTAAAATCTGCAGATaGTCAAGTCTCCGCTCTAAG +
Preference number: 4 (lower is better)
Translates to: DSGNDSFGPAEIMAVSSTSKICR*SSLRSK
Trigger: CTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGA...AGTGCTCGAGACAGCCATTATTTCTGCCGGGCCGAATGAGTCATTTCCTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAAGCTGTCAAACATTGCTaGAAAGGGAGGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDEAVKHC*KGRSLR
Trigger: CCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGC...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCCTGGCCCAATATAATTaGGCCTCTCCAGCTCTATAT +
Preference number: 4 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLLAQYN*ASPALY
Trigger: ATATAGAGCTGGAGAGGCTCAATTATATTGGGCCAG...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCAAAATTTCTCAAAATTaGCATGGCCATTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASKISQN*HGHWEG
Trigger: GCCTTCCCAATGGCCATGTCAATTTTGAGAAATTTT...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTTTCTCCATCTGGTCTTaGGTGAGCTTGTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SASNQSYPSLAILIELRFFSIWS*VSLCAL
Trigger: CAAAGCACACAAGCTCACTCAAGACCAGATGGAGAA...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCGGATGCAGTGAGCCATaGTCGCAACTCTACACTCTA +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFGCSEP*SQLYTL
Trigger: TAGAGTGTAGAGTTGCGATCATGGCTCACTGCATCC...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTTCACTGAGCCAGCACTaGCCCTGCCAAGGAACTCCA +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVSLSQH*PCQGTP
Trigger: TGGAGTTCCTTGGCAGGGTCAGTGCTGGCTCAGTGA...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp AAAAGTCCCAGGCAAGAAGCAACAAATCCCAACCCAGACCCATATTCCTTCCAATTAACCCAGGAGTGTTaGAAAGAAGCCAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: KSPRQEATNPNPDPYSFQLTQEC*KEARVT
Trigger: TGTGACCCTGGCTTCTTTTCAACACTCCTGGGTTAA...TTGGAAGGAATATGGGTCTGGGTTGGGATTTGTTGCTTCTTGCCTGGGACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCTGGATAACACAGGCATaGGACATGCACAAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAWITQA*DMHKKV
Trigger: AACTTTCTTGTGCATGTCTCATGCCTGTGTTATCCA...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp AAAAGGGAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTCTTTTGCTTGGTGCTTaGTTTCAGGCCAACTCGGGA +
Preference number: 4 (lower is better)
Translates to: KREESEAYFPLSEYGVRGLLLGA*FQANSG
Trigger: TCCCGAGTTGGCCTGAAATCAAGCACCAAGCAAAAG...ACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTCCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR TCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTGAAAAGGGAGGAGTCTaGGGCATACTTTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: SASNQSYPSLAILIELRFEKGGV*GILSLP
Trigger: AGGCAAAGAAAGTATGCCTCAGACTCCTCCCTTTTC...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR GCA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTACCGCGCGCCCACAAATaGGACCAAAGGACAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLPRAHK*DQRTGS
Trigger: GCTCCCTGTCCTTTGGTCGCATTTGTGGGCGCGCGG...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000335927.11
CDS-3UTR GCA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCTTCGATTGTAACCACTaGTGTCAAACATTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSFDCNH*CQTLLK
Trigger: TTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAA...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCTTCGATTGTAACCACTaGTGTCAAACATTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GLHECSWYEMPENKGQPLFDCNH*CQTLLK
Trigger: TTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAA...GAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCTCCACAGCTGTCCTCTaGAGACTGATAGAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFSTAVL*RLIEVS
Trigger: CGAAACCTCTATCAGTCTGCAGAGGACAGCTGTGGA...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATTCCACAGCTGTCCTCTaGAGACTGATAGAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDSTAVL*RLIEVS
Trigger: CGAAACCTCTATCAGTCTGCAGAGGACAGCTGTGGA...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATTAGCTCATACGGATaGATAAATAACCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSISSYG*INNREL
Trigger: CAGTTCTCGGTTATTTATGCATCCGTATGAGCTAAT...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCATTAGCTCATACGGATaGATAAATAACCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: QGLHECSWYEMPENKGQPISSYG*INNREL
Trigger: CAGTTCTCGGTTATTTATGCATCCGTATGAGCTAAT...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGAGACACTGCATCATTTaGTGGACATTCTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLRHCII*WTFFLY
Trigger: ATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCT...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCAGACACTGCATCATTTaGTGGACATTCTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSRHCII*WTFFLY
Trigger: ATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCT...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCAATATAATGGCTGTTTaGAGAGCGACTACAGACTTA +
Preference number: 4 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSNIMAV*RATTDL
Trigger: TAAGTCTGTAGTCGCTCTGCAAACAGCCATTATATT...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCCACAGCATACATACATaGTCTAGTTTTTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSHSIHT*SSFWNH
Trigger: ATGGTTCCAAAAACTAGAGCATGTATGTATGCTGTG...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGCCACACAAGGGTACCTaGTGGGAAGCAATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRPHKGT*WEAMSR
Trigger: TCTGCTCATTGCTTCCCAGCAGGTACCCTTGTGTGG...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TTGCTGAAAAGGGAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCCTCGGCGAGAAACTTTaGCATATACAAGCGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLKREESEAYFPLSEYGVLGEKL*HIQAVR
Trigger: CCTCACCGCTTGTATATGGCAAAGTTTCTCGCCGAG...GACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR GCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAAATGGAAGGTTTCCATTaGTGTTCCTTTTTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQMEGFH*CSFLQS
Trigger: TGACTGCAAAAAGGAACAGCAATGGAAACCTTCCAT...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR CCA 90 bp ACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGTGCTCAACACATAAGTaGCAAACTTTGGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: TKGKQSLQSASNQSYPSLCSTHK*QTLAIS
Trigger: GCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCA...CAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCTGCTCAACACATAAGTaGCAAACTTTGGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPACSTHK*QTLAIS
Trigger: GCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCA...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp GAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGGGAGTTGAAGGATTTTaGGTGCAATTTTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: ECSWYEMPENKGQPLHDLGVEGF*VQFFSS
Trigger: AGATGAGAAAAATTGCACCCAAAATCCTTCAACTCC...CAGATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAACACTGCATCATTTGCTaGACATTCTTTCTGTATGTC +
Preference number: 4 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQHCIIC*TFFLYV
Trigger: GACATACAGAAAGAATGTCCAGCAAATGATGCAGTG...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGAGGACTTCTTCGTACTaGCTGAGCGCAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQRTSSY*LSAASL
Trigger: CAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGTCCT...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATTGTAAAGGGACAACTTaGGGATATTTTAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HECSWYEMPENKGQPLHDCKGTT*GYFRSA
Trigger: AGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACA...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCGCAATGGCACGATCTTaGCTCACCACAATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFAMARS*LTTISA
Trigger: GGCAGAAATTGTGGTGAGCCAAGATCGTGCCATTGC...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACACATCACCTTGTCGGTaGCGAGTATGTGACTTCTGT +
Preference number: 4 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHTSPCR*RVCDFC
Trigger: ACAGAAGTCACATACTCGCCACCGACAAGGTGATGT...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR TCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTATACTTTCCTGCAGGTaGACTCCGAGTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVILSCR*TPSPRP
Trigger: AGGCCGAGGACTCGGAGTTCACCTGCAGGAAAGTAT...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGGCTGTCAAACATTGCTaGAAAGGGAGGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMAVKHC*KGRSLR
Trigger: CCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGC...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR TCA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCACTGGCTATTCGGTaGGCCAGATCTTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: CNMETTRASLPSKSQHRIPLAIR*ARSFKF
Trigger: AAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGG...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp CAAAAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGACTGTGGATGTGGAGCTaGTTTTTGCCAGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: QKKTPSRCRAVIHMEIPGLWMWS*FLPGLL
Trigger: AAGAAGTCCTGGCAAAAATCAGCTCCACATCCACAG...TCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTCTGGCCCAATATAATTaGGCCTCTCCAGCTCTATAT +
Preference number: 4 (lower is better)
Translates to: SASNQSYPSLAILIELRFLAQYN*ASPALY
Trigger: ATATAGAGCTGGAGAGGCTCAATTATATTGGGCCAG...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTACCCGGGTGCTCCAATaGCTGCAGGGTCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESTRVLQ*LQGLHE
Trigger: CTCATGAAGACCCTGCAGTCATTGGAGCACCCGGGT...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTCTGGCAATACTGATTaGGCTAAGGTTTGGGATCTA +
Preference number: 4 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLSGNTD*AKVWDL
Trigger: TAGATCCCAAACCTTAGCTCAATCAGTATTGCCAGA...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATAAAGTGTATCTGTGCCTaGATGACTTGTTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CNMETTRASLPSKSQHRIKCICA*MTCSQK
Trigger: CTTCTGGGAACAAGTCATTCAGGCACAGATACACTT...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACAAGTGTATCTGTGCCTaGATGACTTGTTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNKCICA*MTCSQK
Trigger: CTTCTGGGAACAAGTCATTCAGGCACAGATACACTT...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCCTGAGGTGGGAGGATTaGTTAAGCCAGAGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFLRWED*LSQRSQ
Trigger: TTGACTTCTCTGGCTTAATCAATCCTCCCACCTCAG...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGAACAACATCTCCCTGTaGAACCCAACCCGATCAAGG +
Preference number: 4 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRNNISL*NPTRSR
Trigger: CCTTGATCGGGTTGGGTTTCACAGGGAGATGTTGTT...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp TTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAACACACTACTTTCTGTaGACACCTGTATACATAGGA +
Preference number: 4 (lower is better)
Translates to: FPEVDLQHGNYKGILAQQTHYFL*TPVYIG
Trigger: TCCTATGTATACAGGTGTTCACAGAAAGTAGTGTGT...TTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp CTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGTAAGGAAGAGCGAAAAGGGAGGAGTCTaGGGCATACTTTCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LRHTFLFQNMVSEVVRKSEKGGV*GILSSF
Trigger: GAAAGAGGAAAGTATGCCTCAGACTCCTCCCTTTTC...GCTCTTCCTTACAACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR GCA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGTCCACAGCTGTCCTCTaGAGACTGATAGAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMSTAVL*RLIEVS
Trigger: CGAAACCTCTATCAGTCTGCAGAGGACAGCTGTGGA...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATAACATTAGGTACTAAGTaGTGGATGAGTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CNMETTRASLPSKSQHRITLGTK*WMSASR
Trigger: CCTGGAAGCACTCATCCAGCACTTAGTACCTAATGT...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTACATTAGGTACTAAGTaGTGGATGAGTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SASNQSYPSLAILIELRFTLGTK*WMSASR
Trigger: CCTGGAAGCACTCATCCAGCACTTAGTACCTAATGT...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGACTGTGAGCAGATACTaGAAGATCTTCCGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQTVSRY*KIFRSL
Trigger: GAGGGACCGGAAGATCTTGCAGTATCTGCTCACAGT...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGACTGTGAGCAGATACTaGAAGATCTTCCGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMTVSRY*KIFRSL
Trigger: GAGGGACCGGAAGATCTTGCAGTATCTGCTCACAGT...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGGGGTGCTCCAATGACTaGAGGGTCTTCATGAGTGTT +
Preference number: 4 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMGCSND*RVFMSV
Trigger: AACACTCATGAAGACCCTGCAGTCATTGGAGCACCC...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp AGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCATCTTTGAGTGAGCTTGTGTaGTTTGCTGACCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: SLTKSESICQLQEISSPSLSELV*FADPGA
Trigger: AGCACCCGGGTCAGCAAAGCACACAAGCTCACTCAA...AGATGGAGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATAGGGGAAACAAAGTCTaGAGTCAGCTTCCAACCAGT +
Preference number: 4 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDRGNKV*SQLPTS
Trigger: ACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAACACAGCATACATACATaGTCTAGTTTTTGGAACCAT +
Preference number: 4 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQHSIHT*SSFWNH
Trigger: ATGGTTCCAAAAACTAGAGCATGTATGTATGCTGTG...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCAAGTGTGAGAAGCAATaGTTTACCAGCATATCTGCT +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAKCEKQ*FTSISA
Trigger: AGCAGATATGCTGGTAAAGCATTGCTTCTCACACTT...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAAAGTGTGAGAAGCAATaGTTTACCAGCATATCTGCT +
Preference number: 4 (lower is better)
Translates to: FPEVDLQHGNYKGILAQQKCEKQ*FTSISA
Trigger: AGCAGATATGCTGGTAAAGCATTGCTTCTCACACTT...TTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCACAGGCATGAGACATaGACAAGAAAGTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAHRHET*TRKFFS
Trigger: TGAAAAGAACTTTCTTGTGCATGTCTCATGCCTGTG...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCATTGCTGTTCCTTTTTaGAGTCAGATAAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASIAVPF*SQIRTS
Trigger: AGAAGTCCTTATCTGACTGCAAAAAGGAACAGCAAT...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR GCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGAGTGTCTCCCAAGTTTaGCAGGTGAACACCGAAGGA +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQSVSQV*QVNTEG
Trigger: TCCTTCGGTGTTCACCTGGCAAACTTGGGAGACACT...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR CCA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTTAGGTACTAAGTGCTaGATGAGTGCTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSLGTKC*MSASRD
Trigger: ATCCCTGGAAGCACTCATCCAGCACTTAGTACCTAA...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp AAAAGTCCCAGGCAAGAAGCAACAAATCCCAACCCAGACCCATATTCCTTCCAATTAGGTACTAAGTGCTaGATGAGTGCTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: KSPRQEATNPNPDPYSFQLGTKC*MSASRD
Trigger: ATCCCTGGAAGCACTCATCCAGCACTTAGTACCTAA...TTGGAAGGAATATGGGTCTGGGTTGGGATTTGTTGCTTCTTGCCTGGGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTGGATCACTTAGTCTCTaGTGCTCAACACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: SASNQSYPSLAILIELRFGSLSL*CSTHKW
Trigger: CCACTTATGTGTTGAGCACCAGAGACTAAGTGATCC...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACGGATCACTTAGTCTCTaGTGCTCAACACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNGSLSL*CSTHKW
Trigger: CCACTTATGTGTTGAGCACCAGAGACTAAGTGATCC...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTGGATCACTTAGTCTCTaGTGCTCAACACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSGSLSL*CSTHKW
Trigger: CCACTTATGTGTTGAGCACCAGAGACTAAGTGATCC...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATCTGAACAAATTCTTCTaGCCCAATATAATTGAGCCT +
Preference number: 4 (lower is better)
Translates to: HECSWYEMPENKGQPLHDLNKFF*PNIIEP
Trigger: AGGCTCAATTATATTGGGCCAGAAGAATTTGTTCAG...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GCCCATAATGGGAGGGGGTATGATCATAGTTGGGTGCCAAGGGAAGGTCTCTCTTATTTCCCTTTTACCTaGAACTTAAACTCATACCAC +
Preference number: 4 (lower is better)
Translates to: AHNGRGYDHSWVPREGLSYFPFT*NLNSYH
Trigger: GTGGTATGAGTTTAAGTTCCAGGTAAAAGGGAAATA...AGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATAAGAATACCAGCCCTCTaGTCCTGCTTCAAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: CNMETTRASLPSKSQHRIRIPAL*SCFKKD
Trigger: ATCCTTTTTGAAGCAGGACCAGAGGGCTGGTATTCT...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTACCTACATTGACATaGAAGGGTTTCCAAGACATA +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPALPTLT*KGFQDI
Trigger: TATGTCTTGGAAACCCTTCCATGTCAATGTAGGTAG...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp GCCCATAATGGGAGGGGGTATGATCATAGTTGGGTGCCAAGGGAAGGTCTCTCTGTGTATTACTCAGAATaGCTAATAAACACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: AHNGRGYDHSWVPREGLSVYYSE*LINTFL
Trigger: CAAGAAGGTGTTTATTAGCCATTCTGAGTAATACAC...AGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATACTTTCCTGCAGGTaGACTCCGAGTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESILSCR*TPSPRP
Trigger: AGGCCGAGGACTCGGAGTTCACCTGCAGGAAAGTAT...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000335927.11
CDS-3UTR TCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTGTACTAAGTGCTGGATaGGTGCTTCCAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: HFSLTKSESICQLQEISSVLSAG*VLPGIQ
Trigger: CTGGATCCCTGGAAGCACTCATCCAGCACTTAGTAC...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTGTACTAAGTGCTGGATaGGTGCTTCCAGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFVLSAG*VLPGIQ
Trigger: CTGGATCCCTGGAAGCACTCATCCAGCACTTAGTAC...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGTTTCCGTCCATTCCGTaGGGAGTTGAAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQFPSIP*GVEGFW
Trigger: CCAAAATCCTTCAACTCCTCACGGAATGGACGGAAA...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCTGTGGATGTGGAGCTaGTTTTTGCCAGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMLWMWS*FLPGLL
Trigger: AAGAAGTCCTGGCAAAAATCAGCTCCACATCCACAG...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR TCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCATTATAGAAATTGCTTaGAGGGTCCATCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLIIEIA*RVHLML
Trigger: GAGCATCAGATGGACCCTTCAAGCAATTTCTATAAT...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTAACCCGGGTGCTCCAATaGCTGCAGGGTCTTCATGAG +
Preference number: 4 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLTRVLQ*LQGLHE
Trigger: CTCATGAAGACCCTGCAGTCATTGGAGCACCCGGGT...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAACAGTCTCACAAAATCTaGGTCTATCTGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDEQSHKI*VYLSAA
Trigger: TGCAGCTGACAGATAGACTCAGATTTTGTGAGACTG...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACTTAGGTCTGCTGAGATaGTGCACAGCATACATACAT +
Preference number: 4 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHLGLLR*CTAYIH
Trigger: ATGTATGTATGCTGTGCATCATCTCAGCAGACCTAA...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR TCA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTAGCCACCTAAGCACGTaGCTGATAAGGAGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFSHLST*LIRSLK
Trigger: CTTCAGGCTCCTTATCAGTCACGTGCTTAGGTGGCT...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGACTCCCGACTTCAGGTaGTCTGCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMTPDFR*SACFSL
Trigger: GAGGCTGAAGCAGGCAGATCACCTGAAGTCGGGAGT...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACTACTGTATAGCAGCTaGAAGAAGATACAGCTACCT +
Preference number: 4 (lower is better)
Translates to: CNMETTRASLPSKSQHRILLYSS*KKIQLP
Trigger: AGGTAGCTGTATCTTCTTTCAGCTGCTATACAGTAG...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp AGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGTAAGGAAGAGCAGGAGGCCAACTCGGGAATaGCTTTTAGACTCAAACATG +
Preference number: 4 (lower is better)
Translates to: RHTFLFQNMVSEVVRKSRRPTRE*LLDSNM
Trigger: CATGTTTGAGTCTAAAAGTCATTCCCGAGTTGGCCT...CCTGCTCTTCCTTACAACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR TCA 90 bp AGGGAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGTACTTACTGTGTGACCTaGACAAGTACAAAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: REESEAYFPLSEYGVRGCTYCVT*TSTKVS
Trigger: GGAGACTTTTGTACTTGTTCAGGTCACACAGTAAGT...ACAACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR TCA 90 bp GGGAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGTACCATCACTTACTGTGTaGCCTGAACAAGTACAAAAG +
Preference number: 4 (lower is better)
Translates to: GRSLRHTFLFQNMVSEVVPSLTV*PEQVQK
Trigger: CTTTTGTACTTGTTCAGGTCACACAGTAAGTGATGG...TACAACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR GCA 90 bp CAAAAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAACATTAGGTACTAAGTaGTGGATGAGTGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: QKKTPSRCRAVIHMEIPGTLGTK*WMSASR
Trigger: CCTGGAAGCACTCATCCAGCACTTAGTACCTAATGT...TCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCATTAGCTCATACGGATaGATAAATAACCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAISSYG*INNREL
Trigger: CAGTTCTCGGTTATTTATGCATCCGTATGAGCTAAT...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp ACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGAGACACTGCATCATTTaGTGGACATTCTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: TKGKQSLQSASNQSYPSLRHCII*WTFFLY
Trigger: ATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCT...CAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CAAAAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGATTGCGGATCAGACACTaGATCATTTGCTGGACATTC +
Preference number: 4 (lower is better)
Translates to: QKKTPSRCRAVIHMEIPGLRIRH*IICWTF
Trigger: GAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAA...TCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CAAAAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGACCATGTGTTAAACTCTaGCTAAGAGGCTCGACCTTA +
Preference number: 4 (lower is better)
Translates to: QKKTPSRCRAVIHMEIPGPCVKL*LRGSTL
Trigger: TAAGGTCGAGCCTCTTAGGCAGAGTTTAACACATGG...TCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTTTGAGTGAGCTTGTGTaGTTTGCTGACCCGGGTGCT +
Preference number: 4 (lower is better)
Translates to: HFSLTKSESICQLQEISSLSELV*FADPGA
Trigger: AGCACCCGGGTCAGCAAAGCACACAAGCTCACTCAA...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATAAAACTCCATCCAGGTaGAGAGCTGTGATTCACATG +
Preference number: 4 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDKTPSR*RAVIHM
Trigger: CATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGCCTTCCCGGGATCCCTaGAGAAAATACTTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGPSRDP*RKYFSK
Trigger: CTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGG...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TCAGAATATGGTGTCAGAGGTTGTAAGGAAGAGCAGGTTGTAAGGAAGGGCAGGAAAATGGTGGTCTTTTaGTTGGTGCTTGATTTCAGG +
Preference number: 4 (lower is better)
Translates to: SEYGVRGCKEEQVVRKGRKMVVF*LVLDFR
Trigger: CCTGAAATCAAGCACCAAGCAAAAGACCACCATTTT...CCTGCCCTTCCTTACAACCTGCTCTTCCTTACAACCTCTGACACCATATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR CCA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAATTAGGTACTAAGTGCTaGATGAGTGCTTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDELGTKC*MSASRD
Trigger: ATCCCTGGAAGCACTCATCCAGCACTTAGTACCTAA...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCGCAATTTTTCTCATCTaGTTCTTATCACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASAIFLI*FLSLSG
Trigger: TCCTGATAGTGATAAGAACCAGATGAGAAAAATTGC...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp TATTTTAGGTCTGCTGAGATGATGCACAGCATACATACATGCTCTAGTTTTTGGAGGACTTCTTCGTACTaGCTGAGCGCAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: YFRSAEMMHSIHTCSSFWRTSSY*LSAASL
Trigger: CAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGTCCT...CCAAAAACTAGAGCATGTATGTATGCTGTGCATCATCTCAGCAGACCTAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CCA 90 bp ACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGCTGAACAAATTCTTCTaGCCCAATATAATTGAGCCT +
Preference number: 4 (lower is better)
Translates to: TKGKQSLQSASNQSYPSLLNKFF*PNIIEP
Trigger: AGGCTCAATTATATTGGGCCAGAAGAATTTGTTCAG...CAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTATCTTCACTGAAGACTaGTACTGTGAGCAGATACTG +
Preference number: 4 (lower is better)
Translates to: SASNQSYPSLAILIELRFIFTED*YCEQIL
Trigger: CAGTATCTGCTCACAGTACCAGTCTTCAGTGAAGAT...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAAATTGTAATTATGCCATaGGTTTTCCCAAGATCCTTA +
Preference number: 4 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQIVIMP*VFPRSL
Trigger: TAAGGATCTTGGGAAAACCCATGGCATAATTACAAT...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACCAACCTCTTCGCCACTaGCTATTCGGTGAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYQPLRH*LFGEPD
Trigger: ATCTGGCTCACCGAATAGCCAGTGGCGAAGAGGTTG...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp AAAAGTCCCAGGCAAGAAGCAACAAATCCCAACCCAGACCCATATTCCTTCCAACTATCAATTCATACCTaGCTAGAACCTGTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: KSPRQEATNPNPDPYSFQLSIHT*LEPVRG
Trigger: GCCTCTTACAGGTTCTAGCCAGGTATGAATTGATAG...TTGGAAGGAATATGGGTCTGGGTTGGGATTTGTTGCTTCTTGCCTGGGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCGTCTCCGCTCTAAGATaGTACAGTATTTTCATACAA +
Preference number: 4 (lower is better)
Translates to: METTRASLPSKSQHRIPAVSALR*YSIFIQ
Trigger: TTGTATGAAAATACTGTACCATCTTAGAGCGGAGAC...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACCACAAGGGTACCTGCTaGGAAGCAATGAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYHKGTC*EAMSRT
Trigger: GGTTCTGCTCATTGCTTCCCAGCAGGTACCCTTGTG...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp AAAAGGGAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGGTGGTCTTTTGCTTaGTGCTTGATTTCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: KREESEAYFPLSEYGVRGWWSFA*CLISGQ
Trigger: TTGGCCTGAAATCAAGCACCAAGCAAAAGACCACCA...ACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTCCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR CCA 90 bp AGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCATCTGACTCAACTGAGCTCTaGCAAAAGCAAGGCGACTCA +
Preference number: 4 (lower is better)
Translates to: SLTKSESICQLQEISSPSDSTEL*QKQGDS
Trigger: TGAGTCGCCTTGCTTTTGCCAGAGCTCAGTTGAGTC...AGATGGAGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR TCA 90 bp AGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCATCTTTTCCGTCCATTCCGTaGGGAGTTGAAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: SLTKSESICQLQEISSPSFPSIP*GVEGFW
Trigger: CCAAAATCCTTCAACTCCTCACGGAATGGACGGAAA...AGATGGAGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTAAAATTTCTCAAAATTaGCATGGCCATTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SASNQSYPSLAILIELRFKISQN*HGHWEG
Trigger: GCCTTCCCAATGGCCATGTCAATTTTGAGAAATTTT...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACCTGTCTTTCTCTATATaGTTTTCAGGTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHLSFSI*FSGPSL
Trigger: GAGTGAAGGACCTGAAAATCATATAGAGAAAGACAG...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR TCA 90 bp AGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCATCTTTCTCCATCTGGTCTTaGGTGAGCTTGTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SLTKSESICQLQEISSPSFSIWS*VSLCAL
Trigger: CAAAGCACACAAGCTCACTCAAGACCAGATGGAGAA...AGATGGAGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGCAGTCTCACAAAATCTaGGTCTATCTGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQQSHKI*VYLSAA
Trigger: TGCAGCTGACAGATAGACTCAGATTTTGTGAGACTG...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTCTCAAGTGTCTTCAGTaGACATTTCAGTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSLKCLQ*TFQSHK
Trigger: TTTGTGAGACTGAAATGTTCACTGAAGACACTTGAG...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTGTTGCAGCACACCACTaGAAGAGTTCTCAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVVAAHH*KSSQGR
Trigger: CCTTCCTTGAGAACTCTTTCAGTGGTGTGCTGCAAC...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTGGATGCAGTGAGCCATaGTCGCAACTCTACACTCTA +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVGCSEP*SQLYTL
Trigger: TAGAGTGTAGAGTTGCGATCATGGCTCACTGCATCC...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGAAGGGAAGGTCTCTCTaGGGAGAGCCACCTAAGCAC +
Preference number: 4 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMKGRSL*GEPPKH
Trigger: GTGCTTAGGTGGCTCTCCTCAGAGAGACCTTCCCTT...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACACACACTACTTTCTGTaGACACCTGTATACATAGGA +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNTHYFL*TPVYIG
Trigger: TCCTATGTATACAGGTGTTCACAGAAAGTAGTGTGT...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGCCATGTGTTAAACTCTaGCTAAGAGGCTCGACCTTA +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQPCVKL*LRGSTL
Trigger: TAAGGTCGAGCCTCTTAGGCAGAGTTTAACACATGG...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTGGGTGCTCCAATGACTaGAGGGTCTTCATGAGTGTT +
Preference number: 4 (lower is better)
Translates to: HFSLTKSESICQLQEISSGCSND*RVFMSV
Trigger: AACACTCATGAAGACCCTGCAGTCATTGGAGCACCC...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCAATATAATGGCTGTTTaGAGAGCGACTACAGACTTA +
Preference number: 4 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLNIMAV*RATTDL
Trigger: TAAGTCTGTAGTCGCTCTGCAAACAGCCATTATATT...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTGTGATGTGGAGGGCTTaGCCAAAGGCAAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVVMWRA*PKAKQR
Trigger: TCTCTGTTTTGCCTTTGGGCAAGCCCTCCACATCAC...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACGTGATGTGGAGGGCTTaGCCAAAGGCAAAACAGAGA +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYVMWRA*PKAKQR
Trigger: TCTCTGTTTTGCCTTTGGGCAAGCCCTCCACATCAC...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGTGGGATTCTAAAATCTaGAGATGGTCAAGTCTCCGC +
Preference number: 4 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRWDSKI*RWSSLR
Trigger: GCGGAGACTTGACCATCTGCAGATTTTAGAATCCCA...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACATTCTATGCCTCAGCTaGTATTCCATGCATGTTATC +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNILCLS*YSMHVI
Trigger: GATAACATGCATGGAATAGCAGCTGAGGCATAGAAT...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTAAAATGGTGGTCTTTTaGTTGGTGCTTGATTTCAGG +
Preference number: 4 (lower is better)
Translates to: SASNQSYPSLAILIELRFKMVVF*LVLDFR
Trigger: CCTGAAATCAAGCACCAAGCAAAAGACCACCATTTT...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR CCA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGTGCTCAACACATAAGTaGCAAACTTTGGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGCSTHK*QTLAIS
Trigger: GCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCA...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGGGATCACTTAGTCTCTaGTGCTCAACACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMGSLSL*CSTHKW
Trigger: CCACTTATGTGTTGAGCACCAGAGACTAAGTGATCC...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CCA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTCACTGCATCATTTGCTaGACATTCTTTCTGTATGTC +
Preference number: 4 (lower is better)
Translates to: SASNQSYPSLAILIELRFHCIIC*TFFLYV
Trigger: GACATACAGAAAGAATGTCCAGCAAATGATGCAGTG...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAAATCTTCACTGAAGACTaGTACTGTGAGCAGATACTG +
Preference number: 4 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDEIFTED*YCEQIL
Trigger: CAGTATCTGCTCACAGTACCAGTCTTCAGTGAAGAT...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATATCTTCACTGAAGACTaGTACTGTGAGCAGATACTG +
Preference number: 4 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDIFTED*YCEQIL
Trigger: CAGTATCTGCTCACAGTACCAGTCTTCAGTGAAGAT...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCTCAACTTCTGAGCACTaGAAGACTTGCCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFSTSEH*KTCLIF
Trigger: GAAAATGAGGCAAGTCTTCCAGTGCTCAGAAGTTGA...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACGCTGTCTCGAGCACTTaGGTTCATCATAATATAATG +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNAVSST*VHHNIM
Trigger: CATTATATTATGATGAACCCAAGTGCTCGAGACAGC...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTGGTCACAAGGCTGTTTaGCCCTTCTCTCTGTTCTAC +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVGHKAV*PFSLFY
Trigger: GTAGAACAGAGAGAAGGGCCAAACAGCCTTGTGACC...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGGTATCCTCGGGAGATTaGTTCCAGGACTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMVSSGD*FQDFPG
Trigger: CCCAGGGAAGTCCTGGAACCAATCTCCCGAGGATAC...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACTACCTACATTGACATaGAAGGGTTTCCAAGACATA +
Preference number: 4 (lower is better)
Translates to: CNMETTRASLPSKSQHRILPTLT*KGFQDI
Trigger: TATGTCTTGGAAACCCTTCCATGTCAATGTAGGTAG...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATACTTTCTTTGCCTATTaGCTTCTCAATCAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDTFFAY*LLNQRA
Trigger: AGCCCTCTGATTGAGAAGCCAATAGGCAAAGAAAGT...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638048.1
3UTR CAA 72 bp CCCTCTGGTCCTGCTTCAAAAAGGATAACCTTGAATTaGTCACAGCTAGTAGTTAGTGCTTATCAAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PSGPASKRITLN*SQLVVSAYQRL
Trigger: GAGCCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGAAGCAGGACCAGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CAA 72 bp TTTTTCCAGGTGAAAGTGTATCTGTGCCTGAATGACTaGTTCCCAGAAGTTGACCTGCAACATGGAAACTAC +
Preference number: 4 (lower is better)
Translates to: FFQVKVYLCLND*FPEVDLQHGNY
Trigger: GTAGTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACACTTTCACCTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
3UTR CAA 72 bp GTTTCTTGCAGGCAAGTCCTAATAAACCACTTCATTTaGGGCAAATCCCCAGGGGAGAAACATATTATGCCA +
Preference number: 4 (lower is better)
Translates to: VSCRQVLINHFI*GKSPGEKHIMP
Trigger: TGGCATAATATGTTTCTCCCCTGGGGATTTGCCCAAAATGAAGTGGTTTATTAGGACTTGCCTGCAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTTTTCCGTCCATTCCGTaGGGAGTTGAAGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFFPSIP*GVEGFW
Trigger: CCAAAATCCTTCAACTCCTCACGGAATGGACGGAAA...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCTGTGGATGTGGAGCTaGTTTTTGCCAGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: HFSLTKSESICQLQEISSLWMWS*FLPGLL
Trigger: AAGAAGTCCTGGCAAAAATCAGCTCCACATCCACAG...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGCCCGAGCTACGTCAATaGAATACTCAATCATTCTTG +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQPELRQ*NTQSFL
Trigger: CAAGAATGATTGAGTATTTCATTGACGTAGCTCGGG...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATAAAATTTCTCAAAATTaGCATGGCCATTGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDKISQN*HGHWEG
Trigger: GCCTTCCCAATGGCCATGTCAATTTTGAGAAATTTT...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGATGCTCAAAACCATCTaGACTTCGCAAGGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGMLKTI*TSQGFY
Trigger: ATAGAAACCTTGCGAAGTTCAGATGGTTTTGAGCAT...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTTGGATGCTCCTCAGCTaGTCCTTGTATAAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFWMLLS*SLYKPS
Trigger: ACTTGGCTTATACAAGGATCAGCTGAGGAGCATCCA...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTTCGATTGTAACCACTaGTGTCAAACATTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSFDCNH*CQTLLK
Trigger: TTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAA...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACTTCGATTGTAACCACTaGTGTCAAACATTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNFDCNH*CQTLLK
Trigger: TTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAA...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACATTAGCTCATACGGATaGATAAATAACCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHISSYG*INNREL
Trigger: CAGTTCTCGGTTATTTATGCATCCGTATGAGCTAAT...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp ATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTTGAAGGATTTTGGGTaGAATTTTTCTCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: ILRGNKVCSQLPTSLTPLLKDFG*NFSHLV
Trigger: AACCAGATGAGAAAAATTGCACCCAAAATCCTTCAA...GAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp AGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCATCTTTGCGGATCAGACACTaGATCATTTGCTGGACATTC +
Preference number: 4 (lower is better)
Translates to: SLTKSESICQLQEISSPSLRIRH*IICWTF
Trigger: GAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAA...AGATGGAGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGGTGAAAGTGTATCTGTaGCTGAATGACTTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRVKVYL*LNDLFP
Trigger: TGGGAACAAGTCATTCAGGCACAGATACACTTTCAC...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCATGATGCTTAACTTTTaGCTTTGTAAGCAAGGGACC +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFMMLNF*LCKQGT
Trigger: GGTCCCTTGCTTACAAAGGCAAAAGTTAAGCATCAT...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCATTCTATGCCTCAGCTaGTATTCCATGCATGTTATC +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFILCLS*YSMHVI
Trigger: GATAACATGCATGGAATAGCAGCTGAGGCATAGAAT...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp AGGGAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGTACAAAAGTCTCCTTGTaGCCTGGTTCAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: REESEAYFPLSEYGVRGCTKVSL*PGSIIF
Trigger: AAAGATAATTGAACCAGGGCACAAGGAGACTTTTGT...ACAACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR CCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGTGCTCAACACATAAGTaGCAAACTTTGGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQCSTHK*QTLAIS
Trigger: GCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCA...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp CAAAAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGACACTGCATCATTTGCTaGACATTCTTTCTGTATGTC +
Preference number: 4 (lower is better)
Translates to: QKKTPSRCRAVIHMEIPGHCIIC*TFFLYV
Trigger: GACATACAGAAAGAATGTCCAGCAAATGATGCAGTG...TCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACCATATCCCTTTGAAGTaGGATGGTATAATCATTCTC +
Preference number: 4 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNHIPLK*DGIIIL
Trigger: GAGAATGATTATACCATCCCACTTCAAAGGGATATG...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGCTTGAGCCCAAAAGTTaGAGACCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRLEPKS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCCAACTTTTGGGCTCAAG...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGCACAAGGGTACCTGCTaGGAAGCAATGAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRHKGTC*EAMSRT
Trigger: GGTTCTGCTCATTGCTTCCCAGCAGGTACCCTTGTG...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTAGCTGTCAAACATTGCTaGAAAGGGAGGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLAVKHC*KGRSLR
Trigger: CCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGC...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGGCTGTCAAACATTGCTaGAAAGGGAGGAGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMAVKHC*KGRSLR
Trigger: CCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGC...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCACTGGCTATTCGGTaGGCCAGATCTTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: HFSLTKSESICQLQEISSPLAIR*ARSFKF
Trigger: AAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGG...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp ATTGATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGATTATAGAAATTGCTTaGAGGGTCCATCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: IDGCKGTTWGYFRSAEMMIIEIA*RVHLML
Trigger: GAGCATCAGATGGACCCTTCAAGCAATTTCTATAAT...CATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR TCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGATTATAGAAATTGCTTaGAGGGTCCATCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQIIEIA*RVHLML
Trigger: GAGCATCAGATGGACCCTTCAAGCAATTTCTATAAT...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGGTTGCAGCACACCACTaGAAGAGTTCTCAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRVAAHH*KSSQGR
Trigger: CCTTCCTTGAGAACTCTTTCAGTGGTGTGCTGCAAC...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGTACAAAACTGCACCATaGTGCTTAACTTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGYKTAP*CLTFAF
Trigger: AAAGGCAAAAGTTAAGCATCATGGTGCAGTTTTGTA...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGTCCACAGCTGTCCTCTaGAGACTGATAGAGGTTTCG +
Preference number: 4 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMSTAVL*RLIEVS
Trigger: CGAAACCTCTATCAGTCTGCAGAGGACAGCTGTGGA...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCATGTGTTAAACTCTaGCTAAGAGGCTCGACCTTA +
Preference number: 4 (lower is better)
Translates to: HFSLTKSESICQLQEISSPCVKL*LRGSTL
Trigger: TAAGGTCGAGCCTCTTAGGCAGAGTTTAACACATGG...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTAGTTCGTGGTACGAGATaGCAGAAAACAAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLVRGTR*QKTKAS
Trigger: GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAAC...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTAGGGTGCTCCAATGACTaGAGGGTCTTCATGAGTGTT +
Preference number: 4 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLGCSND*RVFMSV
Trigger: AACACTCATGAAGACCCTGCAGTCATTGGAGCACCC...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATATATCTCCTCTTTTCATaGTCAAAACCATCTGAACTT +
Preference number: 4 (lower is better)
Translates to: CNMETTRASLPSKSQHRIYLLFS*SKPSEL
Trigger: AAGTTCAGATGGTTTTGAGCATGAAAAGAGGAGATA...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp AGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCATCTTGCTCAACACATAAGTaGCAAACTTTGGCCATTAGC +
Preference number: 4 (lower is better)
Translates to: SLTKSESICQLQEISSPSCSTHK*QTLAIS
Trigger: GCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCA...AGATGGAGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp CAAAAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGGAGTTGAAGGATTTTaGGTGCAATTTTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: QKKTPSRCRAVIHMEIPGGVEGF*VQFFSS
Trigger: AGATGAGAAAAATTGCACCCAAAATCCTTCAACTCC...TCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCGGAGTTGAAGGATTTTaGGTGCAATTTTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFGVEGF*VQFFSS
Trigger: AGATGAGAAAAATTGCACCCAAAATCCTTCAACTCC...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCTTCATGAGTGTTCGTaGTACGAGATGCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: HFSLTKSESICQLQEISSLHECS*YEMPEN
Trigger: GTTTTCTGGCATCTCGTACCACGAACACTCATGAAG...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGGACCAATATGTGATGTaGAGGGCTTGCCCAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRDQYVM*RACPKA
Trigger: TGCCTTTGGGCAAGCCCTCCACATCACATATTGGTC...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGCCCTTTGAAGTGGGATaGTATAATCATTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRPFEVG*YNHSHL
Trigger: CAAGTGAGAATGATTATACCATCCCACTTCAAAGGG...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCCATATCCCTTTGAAGTaGGATGGTATAATCATTCTC +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFHIPLK*DGIIIL
Trigger: GAGAATGATTATACCATCCCACTTCAAAGGGATATG...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACTAGGTAAACATACATaGAAACAAAAGCCATACACA +
Preference number: 4 (lower is better)
Translates to: CNMETTRASLPSKSQHRILGKHT*KQKPYT
Trigger: TGTGTATGGCTTTTGTTTCCATGTATGTTTACCTAG...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTCATTCCGTGAGGAGTTaGAGGATTTTGGGTGCAATT +
Preference number: 4 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESHSVRS*RILGAI
Trigger: AATTGCACCCAAAATCCTTCAACTCCTCACGGAATG...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACCTACTGTATAGCAGCTaGAAGAAGATACAGCTACCT +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYLLYSS*KKIQLP
Trigger: AGGTAGCTGTATCTTCTTTCAGCTGCTATACAGTAG...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGTTCGATTGTAACCACTaGTGTCAAACATTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQFDCNH*CQTLLK
Trigger: TTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAA...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTTCACTTAGTCTCTGGTaGTCAACACATAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVSLSLW*STHKWQ
Trigger: TTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGA...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TATTTTAGGTCTGCTGAGATGATGCACAGCATACATACATGCTCTAGTTTTTGGTCACTTAGTCTCTGGTaGTCAACACATAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: YFRSAEMMHSIHTCSSFWSLSLW*STHKWQ
Trigger: TTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGA...CCAAAAACTAGAGCATGTATGTATGCTGTGCATCATCTCAGCAGACCTAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCTTGAAGGATTTTGGGTaGAATTTTTCTCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFLKDFG*NFSHLV
Trigger: AACCAGATGAGAAAAATTGCACCCAAAATCCTTCAA...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTCAGTGGAGATTAGGATaGATAATTCGGCACCATTTC +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVQWRLG*IIRHHF
Trigger: GAAATGGTGCCGAATTATGCATCCTAATCTCCACTG...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACCAGTGGAGATTAGGATaGATAATTCGGCACCATTTC +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYQWRLG*IIRHHF
Trigger: GAAATGGTGCCGAATTATGCATCCTAATCTCCACTG...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGTCAGCTGCTATTCCATaGATGTTATCATTCCTACAT +
Preference number: 4 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRSAAIP*MLSFLH
Trigger: ATGTAGGAATGATAACATGCATGGAATAGCAGCTGA...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAAGCAATTTTTCTCATCTaGTTCTTATCACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDEAIFLI*FLSLSG
Trigger: TCCTGATAGTGATAAGAACCAGATGAGAAAAATTGC...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGGAGTTGAAGGATTTTaGGTGCAATTTTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQGVEGF*VQFFSS
Trigger: AGATGAGAAAAATTGCACCCAAAATCCTTCAACTCC...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGCTGAACAAATTCTTCTaGCCCAATATAATTGAGCCT +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQLNKFF*PNIIEP
Trigger: AGGCTCAATTATATTGGGCCAGAAGAATTTGTTCAG...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCCTAGGTAAACATACATaGAAACAAAAGCCATACACA +
Preference number: 4 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFLGKHT*KQKPYT
Trigger: TGTGTATGGCTTTTGTTTCCATGTATGTTTACCTAG...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTTGGTGGTCTTTTGCTTaGTGCTTGATTTCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESWWSFA*CLISGQ
Trigger: TTGGCCTGAAATCAAGCACCAAGCAAAAGACCACCA...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638048.1
3UTR CAA 72 bp ACCATTGAGTTAACAGCAAGGTGTTTTTCATCTGTTTaGTTTACTGCTATAGTGGGGACAGGTAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: TIELTARCFSSV*FTAIVGTGNFS
Trigger: GGAGAAGTTACCTGTCCCCACTATAGCAGTAAACAAAACAGATGAAAAACACCTTGCTGTTAACTCAATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR TCA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGCATTCCGTGAGGAGTTaGAGGATTTTGGGTGCAATT +
Preference number: 4 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMHSVRS*RILGAI
Trigger: AATTGCACCCAAAATCCTTCAACTCCTCACGGAATG...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTACCACTGGCTATTCGGTaGGCCAGATCTTTTAAGTTT +
Preference number: 4 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLPLAIR*ARSFKF
Trigger: AAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGG...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCTCAAGTGTCTTCAGTaGACATTTCAGTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: HFSLTKSESICQLQEISSLKCLQ*TFQSHK
Trigger: TTTGTGAGACTGAAATGTTCACTGAAGACACTTGAG...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACTTACACATGAATCTATaGACTCAGCTTCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYLHMNL*TQLLSR
Trigger: CCTGGATAGAAGCTGAGTTCATAGATTCATGTGTAA...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGCTTGTTCCCAGAAGTTaGCCTGCAACATGGAAACTA +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRLVPRS*PATWKL
Trigger: TAGTTTCCATGTTGCAGGTCAACTTCTGGGAACAAG...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR TCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACTTTCCTGCTGCCAGTTaGTTCCATTTGAGAAATCAA +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYFPAAS*FHLRNQ
Trigger: TTGATTTCTCAAATGGAATCAACTGGCAGCAGGAAA...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTTATCAAGTTATACGTTaGAGCACACCACTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFYQVIR*STPLKE
Trigger: CTCTTTCAGTGGTGTGCTGCAACGTATAACTTGATA...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGCCTTCCCGGGATCCCTaGAGAAAATACTTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMPSRDP*RKYFSK
Trigger: CTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGG...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGCAATTTTTCTCATCTaGTTCTTATCACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: VFSEHFSLTKSESICQLQAIFLI*FLSLSG
Trigger: TCCTGATAGTGATAAGAACCAGATGAGAAAAATTGC...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACAGAGAGGAAGCAGTaGAGATTAGGATGCATAATT +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVTERKQ*RLGCII
Trigger: AATTATGCATCCTAATCTCCACTGCTTCCTCTCTGT...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACACAGAGAGGAAGCAGTaGAGATTAGGATGCATAATT +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYTERKQ*RLGCII
Trigger: AATTATGCATCCTAATCTCCACTGCTTCCTCTCTGT...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTGCTTGGAAAGCAAACTaGAGTTATGCTGCTGTACAT +
Preference number: 4 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESAWKAN*SYAAVH
Trigger: ATGTACAGCAGCATAACTCCAGTTTGCTTTCCAAGC...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR TCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTCTGTCTTTCTCTATATaGTTTTCAGGTCCTTCACTC +
Preference number: 4 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESLSFSI*FSGPSL
Trigger: GAGTGAAGGACCTGAAAATCATATAGAGAAAGACAG...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTCTCAAGTGTCTTCAGTaGACATTTCAGTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESLKCLQ*TFQSHK
Trigger: TTTGTGAGACTGAAATGTTCACTGAAGACACTTGAG...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR TCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGTGGATAACACAGGCATaGGACATGCACAAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRWITQA*DMHKKV
Trigger: AACTTTCTTGTGCATGTCTCATGCCTGTGTTATCCA...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTTTCGATTGTAACCACTaGTGTCAAACATTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVFDCNH*CQTLLK
Trigger: TTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAA...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TATTTTAGGTCTGCTGAGATGATGCACAGCATACATACATGCTCTAGTTTTTGGAGACACTGCATCATTTaGTGGACATTCTTTCTGTAT +
Preference number: 4 (lower is better)
Translates to: YFRSAEMMHSIHTCSSFWRHCII*WTFFLY
Trigger: ATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCT...CCAAAAACTAGAGCATGTATGTATGCTGTGCATCATCTCAGCAGACCTAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR GCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTTCAGCTGCTATTCCATaGATGTTATCATTCCTACAT +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVSAAIP*MLSFLH
Trigger: ATGTAGGAATGATAACATGCATGGAATAGCAGCTGA...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACGGAGTTGAAGGATTTTaGGTGCAATTTTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYGVEGF*VQFFSS
Trigger: AGATGAGAAAAATTGCACCCAAAATCCTTCAACTCC...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTAATCTTCACTGAAGACTaGTACTGTGAGCAGATACTG +
Preference number: 4 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLIFTED*YCEQIL
Trigger: CAGTATCTGCTCACAGTACCAGTCTTCAGTGAAGAT...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CCA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTAAAGAAAAAGAAACATaGCCCAATCACATACTGGAC +
Preference number: 4 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFKEKET*PNHILD
Trigger: GTCCAGTATGTGATTGGGCCATGTTTCTTTTTCTTT...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTAAAGAAAAAGAAACATaGCCCAATCACATACTGGAC +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVKEKET*PNHILD
Trigger: GTCCAGTATGTGATTGGGCCATGTTTCTTTTTCTTT...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTTTATGCTGCTGTACATaGAAGGTTTCCATTGCTGTT +
Preference number: 4 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESLCCCT*KVSIAV
Trigger: AACAGCAATGGAAACCTTCCATGTACAGCAGCATAA...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638048.1
3UTR CAA 72 bp ACCCTTAGTTTAATCAATTCCTCAGTTAGAACTGGCTaGTCTTCTTATCTCCTCTTTTCATGCTCAAAACCA +
Preference number: 4 (lower is better)
Translates to: TLSLINSSVRTG*SSYLLFSCSKP
Trigger: TGGTTTTGAGCATGAAAAGAGGAGATAAGAAGACAAGCCAGTTCTAACTGAGGAATTGATTAAACTAAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR TCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGTTACACATGAATCTATaGACTCAGCTTCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRLHMNL*TQLLSR
Trigger: CCTGGATAGAAGCTGAGTTCATAGATTCATGTGTAA...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTTTGAAGGATTTTGGGTaGAATTTTTCTCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: HFSLTKSESICQLQEISSLKDFG*NFSHLV
Trigger: AACCAGATGAGAAAAATTGCACCCAAAATCCTTCAA...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR GCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACTTGAAGGATTTTGGGTaGAATTTTTCTCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYLKDFG*NFSHLV
Trigger: AACCAGATGAGAAAAATTGCACCCAAAATCCTTCAA...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTTTGGCTAAGATCAAGTaGAGAGTAGAAAATACATGT +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVLAKIK*RVENTC
Trigger: ACATGTATTTTCTACTCTGCACTTGATCTTAGCCAA...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTGCAATTTTTCTCATCTaGTTCTTATCACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFAIFLI*FLSLSG
Trigger: TCCTGATAGTGATAAGAACCAGATGAGAAAAATTGC...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACGCAATTTTTCTCATCTaGTTCTTATCACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYAIFLI*FLSLSG
Trigger: TCCTGATAGTGATAAGAACCAGATGAGAAAAATTGC...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp TATTTTAGGTCTGCTGAGATGATGCACAGCATACATACATGCTCTAGTTTTTGGATTGTAATTATGCCATaGGTTTTCCCAAGATCCTTA +
Preference number: 4 (lower is better)
Translates to: YFRSAEMMHSIHTCSSFWIVIMP*VFPRSL
Trigger: TAAGGATCTTGGGAAAACCCATGGCATAATTACAAT...CCAAAAACTAGAGCATGTATGTATGCTGTGCATCATCTCAGCAGACCTAAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGCCCTTTGAAGTGGGATaGTATAATCATTCTCACTTG +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRPFEVG*YNHSHL
Trigger: CAAGTGAGAATGATTATACCATCCCACTTCAAAGGG...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTTATTTCCCTTTTACCTaGAACTTAAACTCATACCAC +
Preference number: 4 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVYFPFT*NLNSYH
Trigger: GTGGTATGAGTTTAAGTTCCAGGTAAAAGGGAAATA...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CCA 90 bp AGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTACGTGTATTACTCAGAATaGCTAATAAACACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SFTVSKACLQEQPTTICYVYYSE*LINTFL
Trigger: CAAGAAGGTGTTTATTAGCCATTCTGAGTAATACAC...GTAACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGATTAGCTCATACGGATaGATAAATAACCGAGAACTG +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRISSYG*INNREL
Trigger: CAGTTCTCGGTTATTTATGCATCCGTATGAGCTAAT...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR GCA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTTTGAAGGATTTTGGGTaGAATTTTTCTCATCTGGTT +
Preference number: 4 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESLKDFG*NFSHLV
Trigger: AACCAGATGAGAAAAATTGCACCCAAAATCCTTCAA...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
3UTR CAA 72 bp CTTATTATAAAGACCAGCCCCTTAAGGAAGAGAAAATaGCATTCTACTCACTACAGTCATTTGTCATGTAAT +
Preference number: 4 (lower is better)
Translates to: LIIKTSPLRKRK*HSTHYSHLSCN
Trigger: ATTACATGACAAATGACTGTAGTGAGTAGAATGCAATTTTCTCTTCCTTAAGGGGCTGGTCTTTATAATAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR GCA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGCTTTTAAAAGTTTCCTaGTGCCAGTTGATTCCATTT +
Preference number: 4 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRLLKVS*CQLIPF
Trigger: AAATGGAATCAACTGGCAGCAGGAAACTTTTAAAAG...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS GCA 90 bp TACTTTCCTGCAGGTGAACTCCGAGTCCTCGGCCTCCCGGCTGCGTaGCGCGCGCCCACAAATGCGACCAAAGGACAGGGAGCTAAAGCG +
Preference number: 5 (lower is better)
Translates to: YFPAGELRVLGLPAA*RAPTNATKGQGAKA
Trigger: CGCTTTAGCTCCCTGTCCTTTGGTCGCATTTGTGGGCGCGCGGCACGCAGCCGGGAGGCCGAGGACTCGGAGTTCACCTGCAGGAAAGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000436139.6
ENST00000507538.1
ENST00000613784.1
CDS GCA 90 bp TGTATGTCTGCAGGTGAACTCCGAGTCCTCGGCCTCCCGGCTGCGTaGCGCGCGCCCACAAATGCGACCAAAGGACAGGGAGCTAAAGCG +
Preference number: 5 (lower is better)
Translates to: CMSAGELRVLGLPAA*RAPTNATKGQGAKA
Trigger: CGCTTTAGCTCCCTGTCCTTTGGTCGCATTTGTGGGCGCGCGGCACGCAGCCGGGAGGCCGAGGACTCGGAGTTCACCTGCAGACATACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504863.1
CDS GCA 90 bp GCCCTTGCTCGGCAACGTGCAGCCCAGGAGCTCGGCGAGAAACTTTaGCATATACAAGCGGTGAGGCAGGGTCCCTCCCGATGCGCCGTT +
Preference number: 5 (lower is better)
Translates to: ALARQRAAQELGEKL*HIQAVRQGPSRCAV
Trigger: AACGGCGCATCGGGAGGGACCCTGCCTCACCGCTTGTATATGGCAAAGTTTCTCGCCGAGCTCCTGGGCTGCACGTTGCCGAGCAAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508294.1
ENST00000510780.5
ENST00000512343.5
ENST00000512716.1
ENST00000514050.6
CDS TCA 90 bp GTGCAGCCCAGGAGCTCGGCGAGAAACTTTGCCATATACAAGCGGTaGGGCAGGGTCCCTCCCGATGCGCCGTTTCTGTCCTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: VQPRSSARNFAIYKR*GRVPPDAPFLSFPL
Trigger: AAGGGGAAAGGACAGAAACGGCGCATCGGGAGGGACCCTGCCTCACCGCTTGTATATGGCAAAGTTTCTCGCCGAGCTCCTGGGCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508294.1
ENST00000510780.5
ENST00000512343.5
ENST00000512716.1
ENST00000514050.6
CDS GCA 90 bp CCTCTCCACACAGCCACCTGCCATACCCGAGTCTCCTTTTCCTCATaGTTCTTCAGCCCATTGGCTCACCCCACGTGGCAGGGAACACAG +
Preference number: 5 (lower is better)
Translates to: PLHTATCHTRVSFSS*FFSPLAHPTWQGTQ
Trigger: CTGTGTTCCCTGCCACGTGGGGTGAGCCAATGGGCTGAAGAAGCATGAGGAAAAGGAGACTCGGGTATGGCAGGTGGCTGTGTGGAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510780.5
ENST00000512343.5
CDS TCA 90 bp AGCTCATCTGAGATTCCCCAGGCAGGTGACCCGAGGCGACTCAACTaGGCTCTGGCAAAAGCAAGGCGACTCAGTGTCTCCCAAGTTTGC +
Preference number: 5 (lower is better)
Translates to: SSSEIPQAGDPRRLN*ALAKARRLSVSQVC
Trigger: GCAAACTTGGGAGACACTGAGTCGCCTTGCTTTTGCCAGAGCTCAGTTGAGTCGCCTCGGGTCACCTGCCTGGGGAATCTCAGATGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR CAA 90 bp CCCCTCCATGATCTGCAGGAAGCAGCAGCAGCAGCAGGCAGGCAGCTCCCATGTTACTTTCTTTGCCTATaGGCTTCTCAATCAGAGGGC +
Preference number: 5 (lower is better)
Translates to: PLHDLQEAAAAAGRQLPCYFLCL*ASQSEG
Trigger: GCCCTCTGATTGAGAAGCCAATAGGCAAAGAAAGTA...ACATGGGAGCTGCCTGCCTGCTGCTGCTGCTGCTTCCTGCAGATCATGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS TCA 90 bp CTCTGGCAAAAGCAAGGCGACTCAGTGTCTCCCAAGTTTGCCAGGTaGACACCGAAGGATGACAGCACATCACCTTGTCGGTGGCGAGTA +
Preference number: 5 (lower is better)
Translates to: LWQKQGDSVSPKFAR*TPKDDSTSPCRWRV
Trigger: TACTCGCCACCGACAAGGTGATGTGCTGTCATCCTTCGGTGTTCACCTGGCAAACTTGGGAGACACTGAGTCGCCTTGCTTTTGCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR CAA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCGTGAGCTTGTGTGCTTaGCTGACCCGGGTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASVSLCA*LTRVLQ
Trigger: TTGGAGCACCCGGGTCAGCAAAGCACACAAGCTCAC...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGTAAGATGGGAGAGGCGCCCTaGCTCGGCAACGTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: EESEAYFPLSEYGVRGCKMGEAP*LGNVQP
Trigger: GGGCTGCACGTTGCCGAGCAAGGGCGCCTCTCCCAT...CTTACAACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS GCA 90 bp GGTCTTGAGAACTGTGAGCCGATCTGTGGATGTGGAGCTGATTTTTaGCAGGACTTCTTCGTACTGGCTGAGCGCAGCAAGCTTGCGGAT +
Preference number: 5 (lower is better)
Translates to: GLENCEPICGCGADF*QDFFVLAERSKLAD
Trigger: ATCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGTCCTGGCAAAAATCAGCTCCACATCCACAGATCGGCTCACAGTTCTCAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp AGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAACAGTGTCTCCCAAGTTaGCCAGGTGAACACCGAAGG +
Preference number: 5 (lower is better)
Translates to: RGNKVCSQLPTSLTPLWQQCLPS*PGEHRR
Trigger: CCTTCGGTGTTCACCTGGCAAACTTGGGAGACACTG...TTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS GCA 90 bp TGGAGATTAGGATGCATAATTCGGCACCATTTCCCACCCAGGCTCTaGCTGGGAATTCCAGCAGCCGCGCTAAATTCAGGTTACCAACCT +
Preference number: 5 (lower is better)
Translates to: WRLGCIIRHHFPPRL*LGIPAAALNSGYQP
Trigger: AGGTTGGTAACCTGAATTTAGCGCGGCTGCTGGAATTCCCAGGCAGAGCCTGGGTGGGAAATGGTGCCGAATTATGCATCCTAATCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS CCA 90 bp TGGCTGAGCGCAGCAAGCTTGCGGATCAGACACTGCATCATTTGCTaGACATTCTTTCTGTATGTCTGCTCTTCGCCACTGGCTATTCGG +
Preference number: 5 (lower is better)
Translates to: WLSAASLRIRHCIIC*TFFLYVCSSPLAIR
Trigger: CCGAATAGCCAGTGGCGAAGAGCAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000638048.1
CDS CCA 90 bp CGATCTGTGGATGTGGAGCTGATTTTTGCCAGGACTTCTTCGTACTaGCTGAGCGCAGCAAGCTTGCGGATCAGACACTGCATCATTTGC +
Preference number: 5 (lower is better)
Translates to: RSVDVELIFARTSSY*LSAASLRIRHCIIC
Trigger: GCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGTCCTGGCAAAAATCAGCTCCACATCCACAGATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS CCA 90 bp TGTGATGTGGAGGGCTTGCCCAAAGGCAAAACAGAGAGGAAGCAGTaGAGATTAGGATGCATAATTCGGCACCATTTCCCACCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CDVEGLPKGKTERKQ*RLGCIIRHHFPPRL
Trigger: GAGCCTGGGTGGGAAATGGTGCCGAATTATGCATCCTAATCTCCACTGCTTCCTCTCTGTTTTGCCTTTGGGCAAGCCCTCCACATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS CCA 90 bp GTCTCCTTTTCCTCATGCTTCTTCAGCCCATTGGCTCACCCCACGTaGCAGGGAACACAGCCTCTTGGTTCCCTTCATCCGTTTATTCAT +
Preference number: 5 (lower is better)
Translates to: VSFSSCFFSPLAHPT*QGTQPLGSLHPFIH
Trigger: ATGAATAAACGGATGAAGGGAACCAAGAGGCTGTGTTCCCTGCCACGTGGGGTGAGCCAATGGGCTGAAGAAGCATGAGGAAAAGGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508294.1
CDS CCA 90 bp CTTCAGCCCATTGGCTCACCCCACGTGGCAGGGAACACAGCCTCTTaGTTCCCTTCATCCGTTTATTCATCATTCAACAGGCATTCATCA +
Preference number: 5 (lower is better)
Translates to: LQPIGSPHVAGNTAS*FPSSVYSSFNRHSS
Trigger: TGATGAATGCCTGTTGAATGATGAATAAACGGATGAAGGGAACCAAGAGGCTGTGTTCCCTGCCACGTGGGGTGAGCCAATGGGCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508294.1
CDS-3UTR CAA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTCTGAGCGCAGCAAGCTaGCGGATCAGACACTGCATC +
Preference number: 5 (lower is better)
Translates to: SASNQSYPSLAILIELRFLSAAS*RIRHCI
Trigger: GATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAG...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTCTGAGCGCAGCAAGCTaGCGGATCAGACACTGCATC +
Preference number: 5 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSLSAAS*RIRHCI
Trigger: GATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAG...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCTGTATAGACTGTGGCTaGGTCTTGAGAACTGTGAGC +
Preference number: 5 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSCIDCG*VLRTVS
Trigger: GCTCACAGTTCTCAAGACCAAGCCACAGTCTATACA...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTGTGAGCTTGTGTGCTTaGCTGACCCGGGTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: SASNQSYPSLAILIELRFVSLCA*LTRVLQ
Trigger: TTGGAGCACCCGGGTCAGCAAAGCACACAAGCTCAC...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCGTTCTCCATCTGGTCTaGAGTGAGCTTGTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: QGLHECSWYEMPENKGQPVLHLV*SELVCF
Trigger: AAAGCACACAAGCTCACTCAAGACCAGATGGAGAAC...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS GCA 90 bp ACTTCTTCGTACTGGCTGAGCGCAGCAAGCTTGCGGATCAGACACTaGATCATTTGCTGGACATTCTTTCTGTATGTCTGCTCTTCGCCA +
Preference number: 5 (lower is better)
Translates to: TSSYWLSAASLRIRH*IICWTFFLYVCSSP
Trigger: TGGCGAAGAGCAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000638048.1
CDS GCA 90 bp ACTTCTTCGTACTGGCTGAGCGCAGCAAGCTTGCGGATCAGACACTaGATCATTTGCTGGACATTCTTTCTGTATGTCTCTTCGCCACTG +
Preference number: 5 (lower is better)
Translates to: TSSYWLSAASLRIRH*IICWTFFLYVSSPL
Trigger: CAGTGGCGAAGAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335927.11
ENST00000509081.5
CDS-3UTR CAA 90 bp ACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTCTGGCATAAGTGGCAAACTTaGGCCATTAGCTCATACGGA +
Preference number: 5 (lower is better)
Translates to: TTRASLPSKSQHRIPALWHKWQT*AISSYG
Trigger: TCCGTATGAGCTAATGGCCAAAGTTTGCCACTTATG...CCAGAGGGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCCATAAGTGGCAAACTTaGGCCATTAGCTCATACGGA +
Preference number: 5 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSHKWQT*AISSYG
Trigger: TCCGTATGAGCTAATGGCCAAAGTTTGCCACTTATG...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCATTCCGTGAGGAGTaGAAGGATTTTGGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASPFREE*KDFGCN
Trigger: ATTGCACCCAAAATCCTTCAACTCCTCACGGAATGG...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATTGTATAGACTGTGGCTaGGTCTTGAGAACTGTGAGC +
Preference number: 5 (lower is better)
Translates to: HECSWYEMPENKGQPLHDCIDCG*VLRTVS
Trigger: GCTCACAGTTCTCAAGACCAAGCCACAGTCTATACA...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGTGAGCTTGTGTGCTTaGCTGACCCGGGTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDVSLCA*LTRVLQ
Trigger: TTGGAGCACCCGGGTCAGCAAAGCACACAAGCTCAC...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCGTTCTCCATCTGGTCTaGAGTGAGCTTGTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASVLHLV*SELVCF
Trigger: AAAGCACACAAGCTCACTCAAGACCAGATGGAGAAC...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATTGGGTAAAAAGGAGTTaGCTAACCAGCAGCCAACTC +
Preference number: 5 (lower is better)
Translates to: HECSWYEMPENKGQPLHDWVKRS*LTSSQL
Trigger: GAGTTGGCTGCTGGTTAGCAAACTCCTTTTTACCCA...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp TGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATAGCCAAGGCCAGTGGATaGCTTGAGCCCAAAAGTTGG +
Preference number: 5 (lower is better)
Translates to: CNMETTRASLPSKSQHRIAKASG*LEPKSW
Trigger: CCAACTTTTGGGCTCAAGCAATCCACTGGCCTTGGC...TATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp GACTCAGGAAATGACTCATTCGGCCCGGCAGAAATAATGGCTGTCTCGAGCACTATTAACCCAGGAGTGTaGAAAAGAAGCCAGGGTCAC +
Preference number: 5 (lower is better)
Translates to: DSGNDSFGPAEIMAVSSTINPGV*KRSQGH
Trigger: GTGACCCTGGCTTCTTTTCAACACTCCTGGGTTAAT...AGTGCTCGAGACAGCCATTATTTCTGCCGGGCCGAATGAGTCATTTCCTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATGGGAGAGGCGCCCTaGCTCGGCAACGTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESMGEAP*LGNVQP
Trigger: GGGCTGCACGTTGCCGAGCAAGGGCGCCTCTCCCAT...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS TCA 90 bp GCCTCTTTTTGCAGTCAGATAAGGACTTCTCACTGGCCAATGTGCTaGAAATGGTGGTCTCCCATGACTTCTCAGGAAGCTACAGGAGGA +
Preference number: 5 (lower is better)
Translates to: ASFCSQIRTSHWPMC*KWWSPMTSQEATGG
Trigger: TCCTCCTGTAGCTTCCTGAGAAGTCATGGGAGACCACCATTTTCAGCACATTGGCCAGTGAGAAGTCCTTATCTGACTGCAAAAAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510780.5
CDS-3UTR CAA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCCATTCCGTGAGGAGTaGAAGGATTTTGGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: METTRASLPSKSQHRIPAPFREE*KDFGCN
Trigger: ATTGCACCCAAAATCCTTCAACTCCTCACGGAATGG...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGCTGAGCGCAGCAAGCTaGCGGATCAGACACTGCATC +
Preference number: 5 (lower is better)
Translates to: VFSEHFSLTKSESICQLQLSAAS*RIRHCI
Trigger: GATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAG...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCCAAGAATGTCAAATTTaGCAGTCTTCACTTTGGCCC +
Preference number: 5 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSQECQI*QSSLWP
Trigger: GGGCCAAAGTGAAGACTGCAAAATTTGACATTCTTG...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp ACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGGTTCTCCATCTGGTCTaGAGTGAGCTTGTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: TKGKQSLQSASNQSYPSLVLHLV*SELVCF
Trigger: AAAGCACACAAGCTCACTCAAGACCAGATGGAGAAC...CAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS CCA 90 bp GTAAGGGTCGTTGCAGACAGTAATGATATCCCTTTGTATAGACTGTaGCTTGGTCTTGAGAACTGTGAGCCGATCTGTGGATGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: VRVVADSNDIPLYRL*LGLENCEPICGCGA
Trigger: AGCTCCACATCCACAGATCGGCTCACAGTTCTCAAGACCAAGCCACAGTCTATACAAAGGGATATCATTACTGTCTGCAACGACCCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp ATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCATAAGTGGCAAACTTaGGCCATTAGCTCATACGGA +
Preference number: 5 (lower is better)
Translates to: METTRASLPSKSQHRIPAHKWQT*AISSYG
Trigger: TCCGTATGAGCTAATGGCCAAAGTTTGCCACTTATG...GGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGTTTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATCGCCATCAAGGAGTaGAAGTTGCCAATGTTAAAA +
Preference number: 5 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSIAIKE*KLPMLK
Trigger: TTTTAACATTGGCAACTTCAACTCCTTGATGGCGAT...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCAATTCACTCACTTGTTaGGCCAGTTCCCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: QGLHECSWYEMPENKGQPNSLTC*ASSQNF
Trigger: GAAATTTTGGGAACTGGCCAAACAAGTGAGTGAATT...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCCATAAATTCACTCACTaGTTTGGCCAGTTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: VFMSVRGTRCQKTKASPSHKFTH*FGQFPK
Trigger: TTTTGGGAACTGGCCAAACAAGTGAGTGAATTTATG...GGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCATAAATTCACTCACTaGTTTGGCCAGTTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: QGLHECSWYEMPENKGQPHKFTH*FGQFPK
Trigger: TTTTGGGAACTGGCCAAACAAGTGAGTGAATTTATG...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp AAAAGTCCCAGGCAAGAAGCAACAAATCCCAACCCAGACCCATATTCCTTCCAACTGTGCCTGAATGACTaGTTCCCAGAAGTTGACCTG +
Preference number: 5 (lower is better)
Translates to: KSPRQEATNPNPDPYSFQLCLND*FPEVDL
Trigger: CAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAG...TTGGAAGGAATATGGGTCTGGGTTGGGATTTGTTGCTTCTTGCCTGGGACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACGCTGAGGTGGGAGGATaGATTAAGCCAGAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNAEVGG*IKPEKS
Trigger: TGACTTCTCTGGCTTAATCAATCCTCCCACCTCAGC...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp ACTACAAGGGCATCCTTGCCCAGCAAGTCTCAACACAGAATACCAGCCCTCTGGTCAGTTAGAACTGGCTaGTCTTCTTATCTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: TTRASLPSKSQHRIPALWSVRTG*SSYLLF
Trigger: AAAGAGGAGATAAGAAGACAAGCCAGTTCTAACTGA...CCAGAGGGCTGGTATTCTGTGTTGAGACTTGCTGGGCAAGGATGCCCTTGTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp GCCCATAATGGGAGGGGGTATGATCATAGTTGGGTGCCAAGGGAAGGTCTCTCTAAATCAAGCTTTGTGTaGTTAAGCATGGTTCCTCAC +
Preference number: 5 (lower is better)
Translates to: AHNGRGYDHSWVPREGLSKSSFV*LSMVPH
Trigger: GTGAGGAACCATGCTTAACAACACAAAGCTTGATTT...AGAGAGACCTTCCCTTGGCACCCAACTATGATCATACCCCCTCCCATTATGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp TTGCTGAAAAGGGAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCGCTCGGCGAGAAACTTaGCCATATACAAGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: LLKREESEAYFPLSEYGVARRET*PYTSGE
Trigger: CTCACCGCTTGTATATGGCAAAGTTTCTCGCCGAGC...GACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR CAA 90 bp ACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGTCTCAATCAGAGGGCTaGGAAAGCAAACTGGAGTTA +
Preference number: 5 (lower is better)
Translates to: TKGKQSLQSASNQSYPSLSQSEG*ESKLEL
Trigger: TAACTCCAGTTTGCTTTCCAAGCCCTCTGATTGAGA...CAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR CAA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGTGACTTCTGTTCCCTaGTCCCTTCCTACGAGTCAG +
Preference number: 5 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDVTSVP*SLPTSQ
Trigger: CTGACTCGTAGGAAGGGACAAGGGAACAGAAGTCAC...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS-3UTR CAA 90 bp GTGTATCTGTGCCTGAATGACTTGTTCCCAGAAGTTGACCTGCAACATGGAAACCCCAAAGTGGATTGCTaGAGCCCAAAAGTTGGAGAC +
Preference number: 5 (lower is better)
Translates to: VYLCLNDLFPEVDLQHGNPKVDC*SPKVGD
Trigger: GTCTCCAACTTTTGGGCTCAAGCAATCCACTTTGGG...GTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAGATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613784.1
CDS-3UTR CAA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGGCCTCCCAAAGTGGATaGCTTGAGCCCAAAAGTTGG +
Preference number: 5 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGASQSG*LEPKSW
Trigger: CCAACTTTTGGGCTCAAGCAATCCACTTTGGGAGGC...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613784.1
CDS TCA 90 bp AGACTGATAGAGGTTTCGATTGTAACCACTGCTGTCAAACATTGCTaGAAAGGGAGGAGTCTGAGGCATACTTTCCTGCAGGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: RLIEVSIVTTAVKHC*KGRSLRHTFLQVNS
Trigger: GGAGTTCACCTGCAGGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000436139.6
ENST00000507538.1
ENST00000613784.1
CDS TCA 90 bp TCAACAGGCATTCATCAAAAACCTGCTCCGTTCCAGGGTCTGGTCTaGGTATGCTTTTTGCAGTCAGATAAGGACTTCTCACTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: STGIHQKPAPFQGLV*VCFLQSDKDFSLAN
Trigger: ATTGGCCAGTGAGAAGTCCTTATCTGACTGCAAAAAGCATACTCAGACCAGACCCTGGAACGGAGCAGGTTTTTGATGAATGCCTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508294.1
CDS GCA 90 bp CACAGCTGTCCTCTGCAGACTGATAGAGGTTTCGATTGTAACCACTaGTGTCAAACATTGCTGAAAAGGGAGGAGTCTGAGGCATACTTT +
Preference number: 5 (lower is better)
Translates to: HSCPLQTDRGFDCNH*CQTLLKREESEAYF
Trigger: AAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATCAGTCTGCAGAGGACAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000436139.6
ENST00000507538.1
ENST00000509081.5
ENST00000613784.1
ENST00000638048.1
CDS GCA 90 bp GAGGAGGTTGTTGTCATGGTAATACAACCCTCCACAGCTGTCCTCTaGAGACTGATAGAGGTTTCGATTGTAACCACTGCTGTCAAACAT +
Preference number: 5 (lower is better)
Translates to: EEVVVMVIQPSTAVL*RLIEVSIVTTAVKH
Trigger: ATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATCAGTCTGCAGAGGACAGCTGTGGAGGGTTGTATTACCATGACAACAACCTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000436139.6
ENST00000507538.1
ENST00000509081.5
ENST00000613784.1
ENST00000638048.1
CDS-3UTR CAA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTCACTGCTGTCAAACATaGCTGAAAAGGGAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSHCCQT*LKREES
Trigger: AGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTG...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACCCATTCCGTGAGGAGTaGAAGGATTTTGGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHPFREE*KDFGCN
Trigger: ATTGCACCCAAAATCCTTCAACTCCTCACGGAATGG...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CAA 90 bp TGCAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCATCGCCATCAAGGAGTaGAAGTTGCCAATGTTAAAA +
Preference number: 5 (lower is better)
Translates to: CRVFMSVRGTRCQKTKASIAIKE*KLPMLK
Trigger: TTTTAACATTGGCAACTTCAACTCCTTGATGGCGAT...GCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp CATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCCTCCATGATATCGCCATCAAGGAGTaGAAGTTGCCAATGTTAAAA +
Preference number: 5 (lower is better)
Translates to: HECSWYEMPENKGQPLHDIAIKE*KLPMLK
Trigger: TTTTAACATTGGCAACTTCAACTCCTTGATGGCGAT...ATCATGGAGGGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp CAGGGTCTTCATGAGTGTTCGTGGTACGAGATGCCAGAAAACAAAGGCCAGCCCAATTATAGAAATTGCTaGAAGGGTCCATCTGATGCT +
Preference number: 5 (lower is better)
Translates to: QGLHECSWYEMPENKGQPNYRNC*KGPSDA
Trigger: AGCATCAGATGGACCCTTCAAGCAATTTCTATAATT...GGGCTGGCCTTTGTTTTCTGGCATCTCGTACCACGAACACTCATGAAGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp TCAGCTTCCAACCAGTCTTACCCCTCTCTGGCAATACTGATTGAGCTAAGGTTTGTTCTCCATCTGGTCTaGAGTGAGCTTGTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: SASNQSYPSLAILIELRFVLHLV*SELVCF
Trigger: AAAGCACACAAGCTCACTCAAGACCAGATGGAGAAC...AAACCTTAGCTCAATCAGTATTGCCAGAGAGGGGTAAGACTGGTTGGAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GATGGCTGTAAAGGGACAACTTGGGGATATTTTAGGTCTGCTGAGATGATGCACTGGGTAAAAAGGAGTTaGCTAACCAGCAGCCAACTC +
Preference number: 5 (lower is better)
Translates to: DGCKGTTWGYFRSAEMMHWVKRS*LTSSQL
Trigger: GAGTTGGCTGCTGGTTAGCAAACTCCTTTTTACCCA...GTGCATCATCTCAGCAGACCTAAAATATCCCCAAGTTGTCCCTTTACAGCCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CAA 90 bp GACTCAGGAAATGACTCATTCGGCCCGGCAGAAATAATGGCTGTCTCGAGCACTCTAGATCATATCCCTTaGAAGTGGGATGGTATAATC +
Preference number: 5 (lower is better)
Translates to: DSGNDSFGPAEIMAVSSTLDHIP*KWDGII
Trigger: GATTATACCATCCCACTTCAAAGGGATATGATCTAG...AGTGCTCGAGACAGCCATTATTTCTGCCGGGCCGAATGAGTCATTTCCTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp TTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAGTATCAAGTTATACGTaGCAGCACACCACTGAAAGA +
Preference number: 5 (lower is better)
Translates to: FPEVDLQHGNYKGILAQQVSSYT*QHTTER
Trigger: TCTTTCAGTGGTGTGCTGCAACGTATAACTTGATAC...TTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp GAAGGGTTTCCAAGACATAACACAGAGAAAACAAGCAGGGTGATGAATACTAGGGGGTCACAAGGCTGTTaGGCCCTTCTCTCTGTTCTA +
Preference number: 5 (lower is better)
Translates to: EGFPRHNTEKTSRVMNTRGSQGC*ALLSVL
Trigger: TAGAACAGAGAGAAGGGCCAAACAGCCTTGTGACCC...CCTAGTATTCATCACCCTGCTTGTTTTCTCTGTGTTATGTCTTGGAAACCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp TTCCCAGAAGTTGACCTGCAACATGGAAACTACAAGGGCATCCTTGCCCAGCAAATACAGCTACCTACATaGACATGGAAGGGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: FPEVDLQHGNYKGILAQQIQLPT*TWKGFQ
Trigger: TTGGAAACCCTTCCATGTCAATGTAGGTAGCTGTAT...TTGCTGGGCAAGGATGCCCTTGTAGTTTCCATGTTGCAGGTCAACTTCTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp CTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGTAAGGAAGAGCTCTTTTGCTTGGTGCTaGATTTCAGGCCAACTCGGG +
Preference number: 5 (lower is better)
Translates to: LRHTFLFQNMVSEVVRKSSFAWC*ISGQLG
Trigger: CCCGAGTTGGCCTGAAATCAAGCACCAAGCAAAAGA...GCTCTTCCTTACAACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS-3UTR CAA 90 bp ACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGCATTGCTGTTCCTTTTaGCAGTCAGATAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: TKGKQSLQSASNQSYPSLHCCSF*QSDKDF
Trigger: GAAGTCCTTATCTGACTGCAAAAAGGAACAGCAATG...CAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS TCA 90 bp GGAAGGGCAGGTTGTAATCCTGGCTCCATCACTTACTGTGTGACCTaGACAAGTACAAAAGTCTCCTTGTGCCCTGGTTCAATTATCTTT +
Preference number: 5 (lower is better)
Translates to: GRAGCNPGSITYCVT*TSTKVSLCPGSIIF
Trigger: AAAGATAATTGAACCAGGGCACAAGGAGACTTTTGTACTTGTTCAGGTCACACAGTAAGTGATGGAGCCAGGATTACAACCTGCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS TCA 90 bp TGTAAGGAAGGGCAGGTTGTAATCCTGGCTCCATCACTTACTGTGTaGCCTGAACAAGTACAAAAGTCTCCTTGTGCCCTGGTTCAATTA +
Preference number: 5 (lower is better)
Translates to: CKEGQVVILAPSLTV*PEQVQKSPCALVQL
Trigger: TAATTGAACCAGGGCACAAGGAGACTTTTGTACTTGTTCAGGTCACACAGTAAGTGATGGAGCCAGGATTACAACCTGCCCTTCCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS CCA 90 bp ATTCCAGCAGCCGCGCTAAATTCAGGTTACCAACCTCTTCGCCACTaGCTATTCGGTGAGCCAGATCTTTTAAGTTTCTCATCATTCTTT +
Preference number: 5 (lower is better)
Translates to: IPAAALNSGYQPLRH*LFGEPDLLSFSSFF
Trigger: AAAGAATGATGAGAAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGGCGAAGAGGTTGGTAACCTGAATTTAGCGCGGCTGCTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS CCA 90 bp ATCATTCAACAGGCATTCATCAAAAACCTGCTCCGTTCCAGGGTCTaGTCTGAGTATGCTTTTTGCAGTCAGATAAGGACTTCTCACTGG +
Preference number: 5 (lower is better)
Translates to: IIQQAFIKNLLRSRV*SEYAFCSQIRTSHW
Trigger: CCAGTGAGAAGTCCTTATCTGACTGCAAAAAGCATACTCAGACCAGACCCTGGAACGGAGCAGGTTTTTGATGAATGCCTGTTGAATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508294.1
CDS-3UTR CAA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCCACTGCTGTCAAACATaGCTGAAAAGGGAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFHCCQT*LKREES
Trigger: AGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTG...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAACACTGCTGTCAAACATaGCTGAAAAGGGAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDEHCCQT*LKREES
Trigger: AGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTG...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTCATAAGTGGCAAACTTaGGCCATTAGCTCATACGGA +
Preference number: 5 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSHKWQT*AISSYG
Trigger: TCCGTATGAGCTAATGGCCAAAGTTTGCCACTTATG...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAACCATTCCGTGAGGAGTaGAAGGATTTTGGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDEPFREE*KDFGCN
Trigger: ATTGCACCCAAAATCCTTCAACTCCTCACGGAATGG...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTCTGAGCGCAGCAAGCTaGCGGATCAGACACTGCATC +
Preference number: 5 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESLSAAS*RIRHCI
Trigger: GATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAG...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp AAGAAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATTGTATAGACTGTGGCTaGGTCTTGAGAACTGTGAGC +
Preference number: 5 (lower is better)
Translates to: KKTPSRCRAVIHMEIPGDCIDCG*VLRTVS
Trigger: GCTCACAGTTCTCAAGACCAAGCCACAGTCTATACA...ATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTGTGAGCTTGTGTGCTTaGCTGACCCGGGTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESVSLCA*LTRVLQ
Trigger: TTGGAGCACCCGGGTCAGCAAAGCACACAAGCTCAC...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp ACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTTACCCCTCTCTGAAATATAATGGCTGTTaGCAGAGCGACTACAGACTT +
Preference number: 5 (lower is better)
Translates to: TKGKQSLQSASNQSYPSLKYNGC*QSDYRL
Trigger: AAGTCTGTAGTCGCTCTGCAAACAGCCATTATATTT...CAGAGAGGGGTAAGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CAA 90 bp TCACCCCTTCCCGGGATCCCTGCAGAAAATACTTTAGTAAGAAATTACCACTTCAAAATGATCTCCCCTTaGACTGCCGCAACAACAAGG +
Preference number: 5 (lower is better)
Translates to: SPLPGIPAENTLVRNYHFKMISP*TAATTR
Trigger: CCTTGTTGTTGCGGCAGTCAAAGGGGAGATCATTTT...GAAGTGGTAATTTCTTACTAAAGTATTTTCTGCAGGGATCCCGGGAAGGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGTCTTTTGCTTGGTGCTaGATTTCAGGCCAACTCGGG +
Preference number: 5 (lower is better)
Translates to: VFSEHFSLTKSESICQLQSFAWC*ISGQLG
Trigger: CCCGAGTTGGCCTGAAATCAAGCACCAAGCAAAAGA...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS GCA 90 bp CCTTCATCCGTTTATTCATCATTCAACAGGCATTCATCAAAAACCTaGTCCGTTCCAGGGTCTGGTCTGAGTATGCTTTTTGCAGTCAGA +
Preference number: 5 (lower is better)
Translates to: PSSVYSSFNRHSSKT*SVPGSGLSMLFAVR
Trigger: TCTGACTGCAAAAAGCATACTCAGACCAGACCCTGGAACGGAGCAGGTTTTTGATGAATGCCTGTTGAATGATGAATAAACGGATGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508294.1
CDS GCA 90 bp CTATTGGCTTCTCAATCAGAGGGCTTGGAAAGCAAACTGGAGTTATaGTGCTGTACATGGAAGGTTTCCATTGCTGTTCCTTTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: LLASQSEGLESKLEL*CCTWKVSIAVPFCS
Trigger: ACTGCAAAAAGGAACAGCAATGGAAACCTTCCATGTACAGCAGCATAACTCCAGTTTGCTTTCCAAGCCCTCTGATTGAGAAGCCAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514050.6
ENST00000638048.1
CDS CCA 90 bp GGGAGATTGGTTCCAGGACTTCCCTGGGATTCTAAAATCTGCAGATaGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTCATACAACA +
Preference number: 5 (lower is better)
Translates to: GRLVPGLPWDSKICR*SSLRSKMVQYFHTT
Trigger: TGTTGTATGAAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATCCCAGGGAAGTCCTGGAACCAATCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS CCA 90 bp CAATCAGAGGGCTTGGAAAGCAAACTGGAGTTATGCTGCTGTACATaGAAGGTTTCCATTGCTGTTCCTTTTTGCAGTCAGATAAGGACT +
Preference number: 5 (lower is better)
Translates to: QSEGLESKLELCCCT*KVSIAVPFCSQIRT
Trigger: AGTCCTTATCTGACTGCAAAAAGGAACAGCAATGGAAACCTTCCATGTACAGCAGCATAACTCCAGTTTGCTTTCCAAGCCCTCTGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514050.6
ENST00000638048.1
CDS CCA 90 bp TACTTTGCCTATTGGCTTCTCAATCAGAGGGCTTGGAAAGCAAACTaGAGTTATGCTGCTGTACATGGAAGGTTTCCATTGCTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: YFAYWLLNQRAWKAN*SYAAVHGRFPLLFL
Trigger: AAGGAACAGCAATGGAAACCTTCCATGTACAGCAGCATAACTCCAGTTTGCTTTCCAAGCCCTCTGATTGAGAAGCCAATAGGCAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514050.6
CDS CCA 90 bp TTCTTTGCCTATTGGCTTCTCAATCAGAGGGCTTGGAAAGCAAACTaGAGTTATGCTGCTGTACATGGAAGGTTTCCATTGCTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: FFAYWLLNQRAWKAN*SYAAVHGRFPLLFL
Trigger: AAGGAACAGCAATGGAAACCTTCCATGTACAGCAGCATAACTCCAGTTTGCTTTCCAAGCCCTCTGATTGAGAAGCCAATAGGCAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR CAA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTCAAGAATGTCAAATTTaGCAGTCTTCACTTTGGCCC +
Preference number: 5 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSQECQI*QSSLWP
Trigger: GGGCCAAAGTGAAGACTGCAAAATTTGACATTCTTG...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGACTTGTTCCCAGAAGTaGACCTGCAACATGGAAACT +
Preference number: 5 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGTCSQK*TCNMET
Trigger: AGTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGT...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp AAAAGTCCCAGGCAAGAAGCAACAAATCCCAACCCAGACCCATATTCCTTCCAAGTATCAAGTTATACGTaGCAGCACACCACTGAAAGA +
Preference number: 5 (lower is better)
Translates to: KSPRQEATNPNPDPYSFQVSSYT*QHTTER
Trigger: TCTTTCAGTGGTGTGCTGCAACGTATAACTTGATAC...TTGGAAGGAATATGGGTCTGGGTTGGGATTTGTTGCTTCTTGCCTGGGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS TCA 90 bp AGACTGATAGAGGTTTCGATTGTAACCACTGCTGTCAAACATTGCTaGAAAGGGAGGAGTCTGAGGCATACTTTCTTTGCCTATTGGCTT +
Preference number: 5 (lower is better)
Translates to: RLIEVSIVTTAVKHC*KGRSLRHTFFAYWL
Trigger: AAGCCAATAGGCAAAGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATCAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS-3UTR CAA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGCATAAGTGGCAAACTTaGGCCATTAGCTCATACGGA +
Preference number: 5 (lower is better)
Translates to: VFSEHFSLTKSESICQLQHKWQT*AISSYG
Trigger: TCCGTATGAGCTAATGGCCAAAGTTTGCCACTTATG...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp AAAACTCCATCCAGGTGCAGAGCTGTGATTCACATGGAAATTCCAGGAGATGAACAAGAATGTCAAATTTaGCAGTCTTCACTTTGGCCC +
Preference number: 5 (lower is better)
Translates to: KTPSRCRAVIHMEIPGDEQECQI*QSSLWP
Trigger: GGGCCAAAGTGAAGACTGCAAAATTTGACATTCTTG...TTCATCTCCTGGAATTTCCATGTGAATCACAGCTCTGCACCTGGATGGAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp AACACAGCACATACTAAGGGGAAACAAAGTCTGCAGTCAGCTTCCAACCAGTCTCATAAATTCACTCACTaGTTTGGCCAGTTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: NTAHTKGKQSLQSASNQSHKFTH*FGQFPK
Trigger: TTTTGGGAACTGGCCAAACAAGTGAGTGAATTTATG...AGACTGGTTGGAAGCTGACTGCAGACTTTGTTTCCCCTTAGTATGTGCTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTCTGTGCCTGAATGACTaGTTCCCAGAAGTTGACCTG +
Preference number: 5 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVLCLND*FPEVDL
Trigger: CAGGTCAACTTCTGGGAACAAGTCATTCAGGCACAG...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp GAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTGTAAGAGTACAAAAGTCTCCTaGTGCCCTGGTTCAATTATC +
Preference number: 5 (lower is better)
Translates to: EESEAYFPLSEYGVRGCKSTKVS*CPGSII
Trigger: GATAATTGAACCAGGGCACAAGGAGACTTTTGTACT...CTTACAACCTCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS GCA 90 bp TTTCTCATCTGGTTCTTATCACTATCAGGATCACTTAGTCTCTGGTaGTCAACACATAAGTGGCAAACTTTGGCCATTAGCTCATACGGA +
Preference number: 5 (lower is better)
Translates to: FLIWFLSLSGSLSLW*STHKWQTLAISSYG
Trigger: TCCGTATGAGCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGATCCTGATAGTGATAAGAACCAGATGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264400.7
ENST00000436139.6
ENST00000509081.5
ENST00000514889.1
ENST00000613784.1
ENST00000638048.1
CDS GCA 90 bp ACCTTTGTGCTGCCCCACGAAGAGCTGTTCGATAATTATAGAAATTaGTTGAAGGGTCCATCTGATGCTCAAGAATGTCAAATTTTGCAG +
Preference number: 5 (lower is better)
Translates to: TFVLPHEELFDNYRN*LKGPSDAQECQILQ
Trigger: CTGCAAAATTTGACATTCTTGAGCATCAGATGGACCCTTCAAGCAATTTCTATAATTATCGAACAGCTCTTCGTGGGGCAGCACAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTCCATTCCGTGAGGAGTaGAAGGATTTTGGGTGCAAT +
Preference number: 5 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFPFREE*KDFGCN
Trigger: ATTGCACCCAAAATCCTTCAACTCCTCACGGAATGG...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGCTAGATCATATCCCTTaGAAGTGGGATGGTATAATC +
Preference number: 5 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGLDHIP*KWDGII
Trigger: GATTATACCATCCCACTTCAAAGGGATATGATCTAG...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp TTAGTAAGAAATTACCACTTCTATTCAGGGTACCACACAAGGGTACCTGCTGGGCAGCTCTCGAATGGCTaGATTCTGTTAAACAAAAAG +
Preference number: 5 (lower is better)
Translates to: LVRNYHFYSGYHTRVPAGQLSNG*ILLNKK
Trigger: CTTTTTGTTTAACAGAATCAAGCCATTCGAGAGCTG...CCCAGCAGGTACCCTTGTGTGGTACCCTGAATAGAAGTGGTAATTTCTTACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTATAAACCACTTCATTTaGGGCAAATCCCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVINHFI*GKSPGE
Trigger: CTCCCCTGGGGATTTGCCCAAAATGAAGTGGTTTAT...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp AGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCCATCTCATGGAAGGTTTCCATaGCTGTTCCTTTTTGCAGTC +
Preference number: 5 (lower is better)
Translates to: SLTKSESICQLQEISSPSHGRFP*LFLFAV
Trigger: GACTGCAAAAAGGAACAGCAATGGAAACCTTCCATG...AGATGGAGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS CCA 90 bp TTATCACTATCAGGATCACTTAGTCTCTGGTGCTCAACACATAAGTaGCAAACTTTGGCCATTAGCTCATACGGATGCATAAATAACCGA +
Preference number: 5 (lower is better)
Translates to: LSLSGSLSLWCSTHK*QTLAISSYGCINNR
Trigger: TCGGTTATTTATGCATCCGTATGAGCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGATCCTGATAGTGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264400.7
ENST00000436139.6
ENST00000509081.5
ENST00000514889.1
ENST00000613784.1
ENST00000638048.1
CDS-3UTR CAA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTTGGGTAAAAAGGAGTTaGCTAACCAGCAGCCAACTC +
Preference number: 5 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESWVKRS*LTSSQL
Trigger: GAGTTGGCTGCTGGTTAGCAAACTCCTTTTTACCCA...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTACTTGTTCCCAGAAGTaGACCTGCAACATGGAAACT +
Preference number: 5 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFTCSQK*TCNMET
Trigger: AGTTTCCATGTTGCAGGTCAACTTCTGGGAACAAGT...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGGCTGAGGTGGGAGGATaGATTAAGCCAGAGAAGTCA +
Preference number: 5 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRAEVGG*IKPEKS
Trigger: TGACTTCTCTGGCTTAATCAATCCTCCCACCTCAGC...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp CTGAAAAGGGAGGAGTCTGAGGCATACTTTCCTCTTTCAGAATATGGTGTCAGAGGTTCAATTATCTTTTaGCAGTCAGATAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: LKREESEAYFPLSEYGVRGSIIF*QSDKDF
Trigger: GAAGTCCTTATCTGACTGCAAAAAGATAATTGAACC...TCTGACACCATATTCTGAAAGAGGAAAGTATGCCTCAGACTCCTCCCTTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS GCA 90 bp GTATTATCTATGGTCCCTGCCTACTGTACTGCAATTTCTACTCATTaGCAAGGATGTGTTTCAGAGAAACATGAATACCTACATCTGGAT +
Preference number: 5 (lower is better)
Translates to: VLSMVPAYCTAISTH*QGCVSEKHEYLHLD
Trigger: ATCCAGATGTAGGTATTCATGTTTCTCTGAAACACATCCTTGGCAATGAGTAGAAATTGCAGTACAGTAGGCAGGGACCATAGATAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507538.1
CDS CCA 90 bp ATTTTTCTCATCTGGTTCTTATCACTATCAGGATCACTTAGTCTCTaGTGCTCAACACATAAGTGGCAAACTTTGGCCATTAGCTCATAC +
Preference number: 5 (lower is better)
Translates to: IFLIWFLSLSGSLSL*CSTHKWQTLAISSY
Trigger: GTATGAGCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGATCCTGATAGTGATAAGAACCAGATGAGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000264400.7
ENST00000436139.6
ENST00000509081.5
ENST00000514889.1
ENST00000613784.1
ENST00000638048.1
CDS-3UTR CAA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTACACTGCTGTCAAACATaGCTGAAAAGGGAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLHCCQT*LKREES
Trigger: AGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTG...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp TCAAAAAGGATAACCTTGAATTTGTCACAGCTAGTAGTTAGTGCTTATCAAAGGCACTGCTGTCAAACATaGCTGAAAAGGGAGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SKRITLNLSQLVVSAYQRHCCQT*LKREES
Trigger: AGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTG...CCTTTGATAAGCACTAACTACTAGCTGTGACAAATTCAAGGTTATCCTTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp CATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGGAAATAAGTTCTCAAGAATGTCAAATTTaGCAGTCTTCACTTTGGCCC +
Preference number: 5 (lower is better)
Translates to: HFSLTKSESICQLQEISSQECQI*QSSLWP
Trigger: GGGCCAAAGTGAAGACTGCAAAATTTGACATTCTTG...AGAACTTATTTCCTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTATCTGTCAGCTGCAGAATTATAGAAATTGCTaGAAGGGTCCATCTGATGCT +
Preference number: 5 (lower is better)
Translates to: VFSEHFSLTKSESICQLQNYRNC*KGPSDA
Trigger: AGCATCAGATGGACCCTTCAAGCAATTTCTATAATT...CTGCAGCTGACAGATAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GATTCTAAAATCTGCAGATGGTCAAGTCTCCGCTCTAAGATGGTACAGTATTTTGTTTCCTGCTGCCAGTaGATTCCATTTGAGAAATCA +
Preference number: 5 (lower is better)
Translates to: DSKICRWSSLRSKMVQYFVSCCQ*IPFEKS
Trigger: TGATTTCTCAAATGGAATCAACTGGCAGCAGGAAAC...AAAATACTGTACCATCTTAGAGCGGAGACTTGACCATCTGCAGATTTTAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS-3UTR CAA 90 bp GAAGTTTCACAGTCAGTAAAGCCTGTTTACAAGAGCAACCCACAACTATATGTTATACAGCTACCTACATaGACATGGAAGGGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: EVSQSVKPVYKSNPQLYVIQLPT*TWKGFQ
Trigger: TTGGAAACCCTTCCATGTCAATGTAGGTAGCTGTAT...AACATATAGTTGTGGGTTGCTCTTGTAAACAGGCTTTACTGACTGTGAAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS-3UTR CAA 90 bp TATTTTAGGTCTGCTGAGATGATGCACAGCATACATACATGCTCTAGTTTTTGGAAATATAATGGCTGTTaGCAGAGCGACTACAGACTT +
Preference number: 5 (lower is better)
Translates to: YFRSAEMMHSIHTCSSFWKYNGC*QSDYRL
Trigger: AAGTCTGTAGTCGCTCTGCAAACAGCCATTATATTT...CCAAAAACTAGAGCATGTATGTATGCTGTGCATCATCTCAGCAGACCTAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CAA 90 bp TATTTTAGGTCTGCTGAGATGATGCACAGCATACATACATGCTCTAGTTTTTGGAATTATAGAAATTGCTaGAAGGGTCCATCTGATGCT +
Preference number: 5 (lower is better)
Translates to: YFRSAEMMHSIHTCSSFWNYRNC*KGPSDA
Trigger: AGCATCAGATGGACCCTTCAAGCAATTTCTATAATT...CCAAAAACTAGAGCATGTATGTATGCTGTGCATCATCTCAGCAGACCTAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000509081.5
CDS-3UTR CAA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTAATTCACTCACTTGTTaGGCCAGTTCCCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESNSLTC*ASSQNF
Trigger: GAAATTTTGGGAACTGGCCAAACAAGTGAGTGAATT...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTCATAAATTCACTCACTaGTTTGGCCAGTTCCCAAAA +
Preference number: 5 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESHKFTH*FGQFPK
Trigger: TTTTGGGAACTGGCCAAACAAGTGAGTGAATTTATG...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp GATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTAATTATAGAAATTGCTaGAAGGGTCCATCTGATGCT +
Preference number: 5 (lower is better)
Translates to: DSFSSVFSEHFSLTKSESNYRNC*KGPSDA
Trigger: AGCATCAGATGGACCCTTCAAGCAATTTCTATAATT...AGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp ATTCTTTCTCAAGTGTCTTCAGTGAACATTTCAGTCTCACAAAATCTGAGTCTAAATTCACTCACTTGTTaGGCCAGTTCCCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: ILSQVSSVNISVSQNLSLNSLTC*ASSQNF
Trigger: GAAATTTTGGGAACTGGCCAAACAAGTGAGTGAATT...TAGACTCAGATTTTGTGAGACTGAAATGTTCACTGAAGACACTTGAGAAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS-3UTR CAA 90 bp AAGCTTTGTGTTGTTAAGCATGGTTCCTCACTGAGTCATGAATTACTAAATATGGATGTCACTGATCTTTaGAGCAGCTTCAGATACATA +
Preference number: 5 (lower is better)
Translates to: KLCVVKHGSSLSHELLNMDVTDL*SSFRYI
Trigger: TATGTATCTGAAGCTGCTCAAAAGATCAGTGACATC...CATATTTAGTAATTCATGACTCAGTGAGGAACCATGCTTAACAACACAAAGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436139.6
CDS CAA 90 bp GGTGAGGCAGGGTCCCTCCCGATGCGCCGTTTCTGTCCTTTCCCCTaGCCAGAGCCCGAGCGCCAGGATCCTGCCCGCAGCCCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: GEAGSLPMRRFCPFP*PEPERQDPARSPPA
Trigger: GGCGGGCGGGCTGCGGGCAGGATCCTGGCGCTCGGGCTCTGGCAAGGGGAAAGGACAGAAACGGCGCATCGGGAGGGACCCTGCCTCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508294.1
ENST00000510780.5
ENST00000512343.5
ENST00000512716.1
ENST00000514050.6
CDS GCA 72 bp GGTCCCTCCCGATGCGCCGTTTCTGTCCTTTCCCCTTaGCAGAGCCCGAGCGCCAGGATCCTGCCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: GPSRCAVSVLSP*QSPSARILPAA
Trigger: GGCTGCGGGCAGGATCCTGGCGCTCGGGCTCTGGCAAGGGGAAAGGACAGAAACGGCGCATCGGGAGGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508294.1
ENST00000510780.5
ENST00000512343.5
ENST00000512716.1
ENST00000514050.6
CDS GCA 72 bp GCAGGTGAACTCCGAGTCCTCGGCCTCCCGGCTGCGTaGCGCGCGCCCACAAATGCGACCAAAGGACAGGGA +
Preference number: 6 (lower is better)
Translates to: AGELRVLGLPAA*RAPTNATKGQG
Trigger: TCCCTGTCCTTTGGTCGCATTTGTGGGCGCGCGGCACGCAGCCGGGAGGCCGAGGACTCGGAGTTCACCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000436139.6
ENST00000504863.1
ENST00000507538.1
ENST00000613784.1
CDS CAA 90 bp CGCCCTTGCTCGGCAACGTGCAGCCCAGGAGCTCGGCGAGAAACTTaGCCATATACAAGCGGTGAGGCAGGGTCCCTCCCGATGCGCCGT +
Preference number: 6 (lower is better)
Translates to: RPCSATCSPGARRET*PYTSGEAGSLPMRR
Trigger: ACGGCGCATCGGGAGGGACCCTGCCTCACCGCTTGTATATGGCAAAGTTTCTCGCCGAGCTCCTGGGCTGCACGTTGCCGAGCAAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508294.1
ENST00000510780.5
ENST00000512343.5
ENST00000512716.1
ENST00000514050.6
CDS TCA 72 bp AGGAGCTCGGCGAGAAACTTTGCCATATACAAGCGGTaGGGCAGGGTCCCTCCCGATGCGCCGTTTCTGTCC +
Preference number: 6 (lower is better)
Translates to: RSSARNFAIYKR*GRVPPDAPFLS
Trigger: GGACAGAAACGGCGCATCGGGAGGGACCCTGCCTCACCGCTTGTATATGGCAAAGTTTCTCGCCGAGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508294.1
ENST00000510780.5
ENST00000512343.5
ENST00000512716.1
ENST00000514050.6
CDS GCA 72 bp ACTCAAACATGGGAGAGGCGCCCTTGCTCGGCAACGTaGAGCCCAGGAGCTCGGCGAGAAACTTTGCCATAT +
Preference number: 6 (lower is better)
Translates to: TQTWERRPCSAT*SPGARRETLPY
Trigger: ATATGGCAAAGTTTCTCGCCGAGCTCCTGGGCTGCACGTTGCCGAGCAAGGGCGCCTCTCCCATGTTTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508294.1
ENST00000510780.5
ENST00000512343.5
ENST00000512716.1
ENST00000514050.6
CDS GCA 72 bp ACAGCCACCTGCCATACCCGAGTCTCCTTTTCCTCATaGTTCTTCAGCCCATTGGCTCACCCCACGTGGCAG +
Preference number: 6 (lower is better)
Translates to: TATCHTRVSFSS*FFSPLAHPTWQ
Trigger: CTGCCACGTGGGGTGAGCCAATGGGCTGAAGAAGCATGAGGAAAAGGAGACTCGGGTATGGCAGGTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510780.5
ENST00000512343.5
CDS CCA 72 bp CCCAGGCAGGTGACCCGAGGCGACTCAACTGAGCTCTaGCAAAAGCAAGGCGACTCAGTGTCTCCCAAGTTT +
Preference number: 6 (lower is better)
Translates to: PRQVTRGDSTEL*QKQGDSVSPKF
Trigger: AAACTTGGGAGACACTGAGTCGCCTTGCTTTTGCCAGAGCTCAGTTGAGTCGCCTCGGGTCACCTGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS TCA 72 bp AAGCAAGGCGACTCAGTGTCTCCCAAGTTTGCCAGGTaGACACCGAAGGATGACAGCACATCACCTTGTCGG +
Preference number: 6 (lower is better)
Translates to: KQGDSVSPKFAR*TPKDDSTSPCR
Trigger: CCGACAAGGTGATGTGCTGTCATCCTTCGGTGTTCACCTGGCAAACTTGGGAGACACTGAGTCGCCTTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS CCA 72 bp GATGTGGAGCTGATTTTTGCCAGGACTTCTTCGTACTaGCTGAGCGCAGCAAGCTTGCGGATCAGACACTGC +
Preference number: 6 (lower is better)
Translates to: DVELIFARTSSY*LSAASLRIRHC
Trigger: GCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGTCCTGGCAAAAATCAGCTCCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS CAA 72 bp GCCAGGACTTCTTCGTACTGGCTGAGCGCAGCAAGCTaGCGGATCAGACACTGCATCATTTGCTGGACATTC +
Preference number: 6 (lower is better)
Translates to: ARTSSYWLSAAS*RIRHCIICWTF
Trigger: GAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGTCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS CAA 90 bp CAACTGAGCTCTGGCAAAAGCAAGGCGACTCAGTGTCTCCCAAGTTaGCCAGGTGAACACCGAAGGATGACAGCACATCACCTTGTCGGT +
Preference number: 6 (lower is better)
Translates to: QLSSGKSKATQCLPS*PGEHRRMTAHHLVG
Trigger: ACCGACAAGGTGATGTGCTGTCATCCTTCGGTGTTCACCTGGCAAACTTGGGAGACACTGAGTCGCCTTGCTTTTGCCAGAGCTCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS CAA 72 bp TCTGGCAAAAGCAAGGCGACTCAGTGTCTCCCAAGTTaGCCAGGTGAACACCGAAGGATGACAGCACATCAC +
Preference number: 6 (lower is better)
Translates to: SGKSKATQCLPS*PGEHRRMTAHH
Trigger: GTGATGTGCTGTCATCCTTCGGTGTTCACCTGGCAAACTTGGGAGACACTGAGTCGCCTTGCTTTTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS CAA 90 bp GTACTGGCTGAGCGCAGCAAGCTTGCGGATCAGACACTGCATCATTaGCTGGACATTCTTTCTGTATGTCTGCTCTTCGCCACTGGCTAT +
Preference number: 6 (lower is better)
Translates to: VLAERSKLADQTLHH*LDILSVCLLFATGY
Trigger: ATAGCCAGTGGCGAAGAGCAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000638048.1
CDS CAA 90 bp GTACTGGCTGAGCGCAGCAAGCTTGCGGATCAGACACTGCATCATTaGCTGGACATTCTTTCTGTATGTCTCTTCGCCACTGGCTATTCG +
Preference number: 6 (lower is better)
Translates to: VLAERSKLADQTLHH*LDILSVCLFATGYS
Trigger: CGAATAGCCAGTGGCGAAGAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335927.11
ENST00000509081.5
CDS CAA 90 bp TCTTCAGCCCATTGGCTCACCCCACGTGGCAGGGAACACAGCCTCTaGGTTCCCTTCATCCGTTTATTCATCATTCAACAGGCATTCATC +
Preference number: 6 (lower is better)
Translates to: SSAHWLTPRGREHSL*VPFIRLFIIQQAFI
Trigger: GATGAATGCCTGTTGAATGATGAATAAACGGATGAAGGGAACCAAGAGGCTGTGTTCCCTGCCACGTGGGGTGAGCCAATGGGCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508294.1
CDS GCA 72 bp CTGCTCCGTTCCAGGGTCTGGTCTGAGTATGCTTTTTaGAGTCAGATAAGGACTTCTCACTGGCCAATGTGC +
Preference number: 6 (lower is better)
Translates to: LLRSRVWSEYAF*SQIRTSHWPMC
Trigger: GCACATTGGCCAGTGAGAAGTCCTTATCTGACTGCAAAAAGCATACTCAGACCAGACCCTGGAACGGAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508294.1
CDS CAA 72 bp GAGCGCAGCAAGCTTGCGGATCAGACACTGCATCATTaGCTGGACATTCTTTCTGTATGTCTGCTCTTCGCC +
Preference number: 6 (lower is better)
Translates to: ERSKLADQTLHH*LDILSVCLLFA
Trigger: GGCGAAGAGCAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000638048.1
CDS GCA 72 bp TACTGGCTGAGCGCAGCAAGCTTGCGGATCAGACACTaGATCATTTGCTGGACATTCTTTCTGTATGTCTGC +
Preference number: 6 (lower is better)
Translates to: YWLSAASLRIRH*IICWTFFLYVC
Trigger: GCAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264400.7
ENST00000504863.1
ENST00000638048.1
CDS GCA 72 bp GCATCTTCACTGAAGACTGGTACTGTGAGCAGATACTaGAAGATCTTCCGGTCCCTCTCAAATGGACACTCC +
Preference number: 6 (lower is better)
Translates to: ASSLKTGTVSRY*KIFRSLSNGHS
Trigger: GGAGTGTCCATTTGAGAGGGACCGGAAGATCTTGCAGTATCTGCTCACAGTACCAGTCTTCAGTGAAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS CCA 72 bp GCAGCAAGCTTGCGGATCAGACACTGCATCATTTGCTaGACATTCTTTCTGTATGTCTGCTCTTCGCCACTG +
Preference number: 6 (lower is better)
Translates to: AASLRIRHCIIC*TFFLYVCSSPL
Trigger: CAGTGGCGAAGAGCAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000638048.1
CDS CCA 72 bp GAGGGCTTGCCCAAAGGCAAAACAGAGAGGAAGCAGTaGAGATTAGGATGCATAATTCGGCACCATTTCCCA +
Preference number: 6 (lower is better)
Translates to: EGLPKGKTERKQ*RLGCIIRHHFP
Trigger: TGGGAAATGGTGCCGAATTATGCATCCTAATCTCCACTGCTTCCTCTCTGTTTTGCCTTTGGGCAAGCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS CAA 72 bp GAGCGCAGCAAGCTTGCGGATCAGACACTGCATCATTaGCTGGACATTCTTTCTGTATGTCTCTTCGCCACT +
Preference number: 6 (lower is better)
Translates to: ERSKLADQTLHH*LDILSVCLFAT
Trigger: AGTGGCGAAGAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335927.11
ENST00000509081.5
CDS CAA 90 bp ACAGCACATCACCTTGTCGGTGGCGAGTATGTGACTTCTGTTCCCTaGTCCCTTCCTACGAGTCAGACTTTAGATTACATGGCACTGACA +
Preference number: 6 (lower is better)
Translates to: TAHHLVGGEYVTSVP*SLPTSQTLDYMALT
Trigger: TGTCAGTGCCATGTAATCTAAAGTCTGACTCGTAGGAAGGGACAAGGGAACAGAAGTCACATACTCGCCACCGACAAGGTGATGTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS TCA 72 bp CCACTGCTGTCAAACATTGCTGAAAAGGGAGGAGTCTaGGGCATACTTTCCTCTAGCTCATCTGAGATTCCC +
Preference number: 6 (lower is better)
Translates to: PLLSNIAEKGGV*GILSSSSSEIP
Trigger: GGGAATCTCAGATGAGCTAGAGGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS GCA 72 bp TACTGGCTGAGCGCAGCAAGCTTGCGGATCAGACACTaGATCATTTGCTGGACATTCTTTCTGTATGTCTCT +
Preference number: 6 (lower is better)
Translates to: YWLSAASLRIRH*IICWTFFLYVS
Trigger: AGAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335927.11
ENST00000509081.5
CDS CCA 72 bp GCCGCGCTAAATTCAGGTTACCAACCTCTTCGCCACTaGCTATTCGGTGAGCCAGATCTTTTAAGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: AALNSGYQPLRH*LFGEPDLLSFS
Trigger: TGAGAAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGGCGAAGAGGTTGGTAACCTGAATTTAGCGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS CAA 90 bp CTGATTTTTGCCAGGACTTCTTCGTACTGGCTGAGCGCAGCAAGCTaGCGGATCAGACACTGCATCATTTGCTGGACATTCTTTCTGTAT +
Preference number: 6 (lower is better)
Translates to: LIFARTSSYWLSAAS*RIRHCIICWTFFLY
Trigger: ATACAGAAAGAATGTCCAGCAAATGATGCAGTGTCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGTCCTGGCAAAAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS CAA 90 bp CTGCAGACTGATAGAGGTTTCGATTGTAACCACTGCTGTCAAACATaGCTGAAAAGGGAGGAGTCTGAGGCATACTTTCCTGCAGGTGAA +
Preference number: 6 (lower is better)
Translates to: LQTDRGFDCNHCCQT*LKREESEAYFPAGE
Trigger: TTCACCTGCAGGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATCAGTCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000436139.6
ENST00000507538.1
ENST00000613784.1
CDS TCA 72 bp GAGGTTTCGATTGTAACCACTGCTGTCAAACATTGCTaGAAAGGGAGGAGTCTGAGGCATACTTTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: EVSIVTTAVKHC*KGRSLRHTFLQ
Trigger: CTGCAGGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000436139.6
ENST00000507538.1
ENST00000613784.1
CDS TCA 72 bp CTCACTGGCCAATGTGCTGAAAATGGTGGTCTCCCATaGCTTCTCAGGAAGCTACAGGAGGATGAATACATA +
Preference number: 6 (lower is better)
Translates to: LTGQCAENGGLP*LLRKLQEDEYI
Trigger: TATGTATTCATCCTCCTGTAGCTTCCTGAGAAGTCATGGGAGACCACCATTTTCAGCACATTGGCCAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510780.5
CDS GCA 72 bp CCTCTGCAGACTGATAGAGGTTTCGATTGTAACCACTaGTGTCAAACATTGCTGAAAAGGGAGGAGTCTGAG +
Preference number: 6 (lower is better)
Translates to: PLQTDRGFDCNH*CQTLLKREESE
Trigger: CTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATCAGTCTGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000436139.6
ENST00000507538.1
ENST00000509081.5
ENST00000613784.1
ENST00000638048.1
CDS GCA 72 bp GTTGTCATGGTAATACAACCCTCCACAGCTGTCCTCTaGAGACTGATAGAGGTTTCGATTGTAACCACTGCT +
Preference number: 6 (lower is better)
Translates to: VVMVIQPSTAVL*RLIEVSIVTTA
Trigger: AGCAGTGGTTACAATCGAAACCTCTATCAGTCTGCAGAGGACAGCTGTGGAGGGTTGTATTACCATGACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000436139.6
ENST00000507538.1
ENST00000509081.5
ENST00000613784.1
ENST00000638048.1
CDS CCA 72 bp AGGGTCCTTCTGCACGAACGCCTGAACAAATTCTTCTaGCCCAATATAATTGAGCCTCTCCAGCTCTATATG +
Preference number: 6 (lower is better)
Translates to: RVLLHERLNKFF*PNIIEPLQLYM
Trigger: CATATAGAGCTGGAGAGGCTCAATTATATTGGGCCAGAAGAATTTGTTCAGGCGTTCGTGCAGAAGGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS CCA 72 bp CAGGCATTCATCAAAAACCTGCTCCGTTCCAGGGTCTaGTCTGAGTATGCTTTTTGCAGTCAGATAAGGACT +
Preference number: 6 (lower is better)
Translates to: QAFIKNLLRSRV*SEYAFCSQIRT
Trigger: AGTCCTTATCTGACTGCAAAAAGCATACTCAGACCAGACCCTGGAACGGAGCAGGTTTTTGATGAATGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508294.1
CDS CAA 72 bp GTAATGATATCCCTTTGTATAGACTGTGGCTTGGTCTaGAGAACTGTGAGCCGATCTGTGGATGTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: VMISLCIDCGLV*RTVSRSVDVEL
Trigger: CAGCTCCACATCCACAGATCGGCTCACAGTTCTCAAGACCAAGCCACAGTCTATACAAAGGGATATCATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS CAA 90 bp TTGCAGACAGTAATGATATCCCTTTGTATAGACTGTGGCTTGGTCTaGAGAACTGTGAGCCGATCTGTGGATGTGGAGCTGATTTTTGCC +
Preference number: 6 (lower is better)
Translates to: LQTVMISLCIDCGLV*RTVSRSVDVELIFA
Trigger: GGCAAAAATCAGCTCCACATCCACAGATCGGCTCACAGTTCTCAAGACCAAGCCACAGTCTATACAAAGGGATATCATTACTGTCTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS CAA 90 bp CTGCAGACTGATAGAGGTTTCGATTGTAACCACTGCTGTCAAACATaGCTGAAAAGGGAGGAGTCTGAGGCATACTTTCCTCTAGCTCAT +
Preference number: 6 (lower is better)
Translates to: LQTDRGFDCNHCCQT*LKREESEAYFPLAH
Trigger: ATGAGCTAGAGGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATCAGTCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509081.5
CDS TCA 72 bp GAGGTTTCGATTGTAACCACTGCTGTCAAACATTGCTaGAAAGGGAGGAGTCTGAGGCATACTTTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: EVSIVTTAVKHC*KGRSLRHTFFA
Trigger: GGCAAAGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS GCA 72 bp TCTCAATCAGAGGGCTTGGAAAGCAAACTGGAGTTATaGTGCTGTACATGGAAGGTTTCCATTGCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: SQSEGLESKLEL*CCTWKVSIAVP
Trigger: AGGAACAGCAATGGAAACCTTCCATGTACAGCAGCATAACTCCAGTTTGCTTTCCAAGCCCTCTGATTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514050.6
ENST00000638048.1
CDS CCA 72 bp ATAAGAAGCCAAGTAGAGAGCATCTTCACTGAAGACTaGTACTGTGAGCAGATACTGCAAGATCTTCCGGTC +
Preference number: 6 (lower is better)
Translates to: IRSQVESIFTED*YCEQILQDLPV
Trigger: GACCGGAAGATCTTGCAGTATCTGCTCACAGTACCAGTCTTCAGTGAAGATGCTCTCTACTTGGCTTCTTAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000509081.5
ENST00000638048.1
CDS CCA 72 bp GGCTTGGAAAGCAAACTGGAGTTATGCTGCTGTACATaGAAGGTTTCCATTGCTGTTCCTTTTTGCAGTCAG +
Preference number: 6 (lower is better)
Translates to: GLESKLELCCCT*KVSIAVPFCSQ
Trigger: CTGACTGCAAAAAGGAACAGCAATGGAAACCTTCCATGTACAGCAGCATAACTCCAGTTTGCTTTCCAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514050.6
ENST00000638048.1
CDS CAA 90 bp GTAGGTTCATTCTTACTTTGCCTATTGGCTTCTCAATCAGAGGGCTaGGAAAGCAAACTGGAGTTATGCTGCTGTACATGGAAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: VGSFLLCLLASQSEG*ESKLELCCCTWKVS
Trigger: GGAAACCTTCCATGTACAGCAGCATAACTCCAGTTTGCTTTCCAAGCCCTCTGATTGAGAAGCCAATAGGCAAAGTAAGAATGAACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514050.6
CDS CAA 90 bp CTGCAGACTGATAGAGGTTTCGATTGTAACCACTGCTGTCAAACATaGCTGAAAAGGGAGGAGTCTGAGGCATACTTTCTTTGCCTATTG +
Preference number: 6 (lower is better)
Translates to: LQTDRGFDCNHCCQT*LKREESEAYFLCLL
Trigger: CAATAGGCAAAGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATCAGTCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS TCA 72 bp ATTCATCAAAAACCTGCTCCGTTCCAGGGTCTGGTCTaGGTATGCTTTTTGCAGTCAGATAAGGACTTCTCA +
Preference number: 6 (lower is better)
Translates to: IHQKPAPFQGLV*VCFLQSDKDFS
Trigger: TGAGAAGTCCTTATCTGACTGCAAAAAGCATACTCAGACCAGACCCTGGAACGGAGCAGGTTTTTGATGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508294.1
CDS GCA 72 bp CAAAAGTCTCCTTGTGCCCTGGTTCAATTATCTTTTTaGAGTCAGATAAGGACTTCTCACTGGCCAATGTGC +
Preference number: 6 (lower is better)
Translates to: QKSPCALVQLSF*SQIRTSHWPMC
Trigger: GCACATTGGCCAGTGAGAAGTCCTTATCTGACTGCAAAAAGATAATTGAACCAGGGCACAAGGAGACTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS CCA 72 bp TCAGGATCACTTAGTCTCTGGTGCTCAACACATAAGTaGCAAACTTTGGCCATTAGCTCATACGGATGCATA +
Preference number: 6 (lower is better)
Translates to: SGSLSLWCSTHK*QTLAISSYGCI
Trigger: TATGCATCCGTATGAGCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGATCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264400.7
ENST00000436139.6
ENST00000509081.5
ENST00000514889.1
ENST00000613784.1
ENST00000638048.1
CDS CCA 72 bp TATTGGCTTCTCAATCAGAGGGCTTGGAAAGCAAACTaGAGTTATGCTGCTGTACATGGAAGGTTTCCATTG +
Preference number: 6 (lower is better)
Translates to: YWLLNQRAWKAN*SYAAVHGRFPL
Trigger: CAATGGAAACCTTCCATGTACAGCAGCATAACTCCAGTTTGCTTTCCAAGCCCTCTGATTGAGAAGCCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514050.6
ENST00000638048.1
CDS CAA 72 bp GATAGAGGTTTCGATTGTAACCACTGCTGTCAAACATaGCTGAAAAGGGAGGAGTCTGAGGCATACTTTCCT +
Preference number: 6 (lower is better)
Translates to: DRGFDCNHCCQT*LKREESEAYFP
Trigger: AGGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000436139.6
ENST00000507538.1
ENST00000509081.5
ENST00000613784.1
CDS CAA 90 bp TCAGGATCACTTAGTCTCTGGTGCTCAACACATAAGTGGCAAACTTaGGCCATTAGCTCATACGGATGCATAAATAACCGAGAACTGAGT +
Preference number: 6 (lower is better)
Translates to: SGSLSLWCSTHKWQT*AISSYGCINNRELS
Trigger: ACTCAGTTCTCGGTTATTTATGCATCCGTATGAGCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGATCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264400.7
ENST00000436139.6
ENST00000509081.5
ENST00000514889.1
ENST00000613784.1
ENST00000638048.1
CDS TCA 72 bp TTCAGGTTACCAACCTCTTCGCCACTGGCTATTCGGTaGGCCAGATCTTTTAAGTTTCTCATCATTCTTTCA +
Preference number: 6 (lower is better)
Translates to: FRLPTSSPLAIR*ARSFKFLIILS
Trigger: TGAAAGAATGATGAGAAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGGCGAAGAGGTTGGTAACCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436139.6
ENST00000613784.1
CDS GCA 72 bp TGGTTCTTATCACTATCAGGATCACTTAGTCTCTGGTaGTCAACACATAAGTGGCAAACTTTGGCCATTAGC +
Preference number: 6 (lower is better)
Translates to: WFLSLSGSLSLW*STHKWQTLAIS
Trigger: GCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGATCCTGATAGTGATAAGAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264400.7
ENST00000436139.6
ENST00000509081.5
ENST00000514889.1
ENST00000613784.1
ENST00000638048.1
CDS GCA 72 bp CTGCCCCACGAAGAGCTGTTCGATAATTATAGAAATTaGTTGAAGGGTCCATCTGATGCTCAAGAATGTCAA +
Preference number: 6 (lower is better)
Translates to: LPHEELFDNYRN*LKGPSDAQECQ
Trigger: TTGACATTCTTGAGCATCAGATGGACCCTTCAAGCAATTTCTATAATTATCGAACAGCTCTTCGTGGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS CAA 72 bp CTTAGTCTCTGGTGCTCAACACATAAGTGGCAAACTTaGGCCATTAGCTCATACGGATGCATAAATAACCGA +
Preference number: 6 (lower is better)
Translates to: LSLWCSTHKWQT*AISSYGCINNR
Trigger: TCGGTTATTTATGCATCCGTATGAGCTAATGGCCAAAGTTTGCCACTTATGTGTTGAGCACCAGAGACTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264400.7
ENST00000436139.6
ENST00000509081.5
ENST00000514889.1
ENST00000613784.1
ENST00000638048.1
CDS CAA 72 bp ACAAAAGTCTCCTTGTGCCCTGGTTCAATTATCTTTTaGCAGTCAGATAAGGACTTCTCACTGGCCAATGTG +
Preference number: 6 (lower is better)
Translates to: TKVSLCPGSIIF*QSDKDFSLANV
Trigger: CACATTGGCCAGTGAGAAGTCCTTATCTGACTGCAAAAAGATAATTGAACCAGGGCACAAGGAGACTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512716.1
CDS CAA 72 bp GATAGAGGTTTCGATTGTAACCACTGCTGTCAAACATaGCTGAAAAGGGAGGAGTCTGAGGCATACTTTCTT +
Preference number: 6 (lower is better)
Translates to: DRGFDCNHCCQT*LKREESEAYFL
Trigger: AAGAAAGTATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638048.1
CDS TCA 72 bp TTTCTGTATGTCTGCTCTTCGCCACTGGCTATTCGGTaGGCCAGATCTTTTAAGTTTCTCATCATTCTTTCA +
Preference number: 6 (lower is better)
Translates to: FLYVCSSPLAIR*ARSFKFLIILS
Trigger: TGAAAGAATGATGAGAAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGGCGAAGAGCAGACATACAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264400.7
ENST00000638048.1
CDS GCA 72 bp ATGGTCCCTGCCTACTGTACTGCAATTTCTACTCATTaGCAAGGATGTGTTTCAGAGAAACATGAATACCTA +
Preference number: 6 (lower is better)
Translates to: MVPAYCTAISTH*QGCVSEKHEYL
Trigger: TAGGTATTCATGTTTCTCTGAAACACATCCTTGGCAATGAGTAGAAATTGCAGTACAGTAGGCAGGGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507538.1
CDS CCA 72 bp ATCTGGTTCTTATCACTATCAGGATCACTTAGTCTCTaGTGCTCAACACATAAGTGGCAAACTTTGGCCATT +
Preference number: 6 (lower is better)
Translates to: IWFLSLSGSLSL*CSTHKWQTLAI
Trigger: AATGGCCAAAGTTTGCCACTTATGTGTTGAGCACCAGAGACTAAGTGATCCTGATAGTGATAAGAACCAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264400.7
ENST00000436139.6
ENST00000509081.5
ENST00000514889.1
ENST00000613784.1
ENST00000638048.1
CDS CAA 72 bp CCCCACGAAGAGCTGTTCGATAATTATAGAAATTGCTaGAAGGGTCCATCTGATGCTCAAGAATGTCAAATT +
Preference number: 6 (lower is better)
Translates to: PHEELFDNYRNC*KGPSDAQECQI
Trigger: AATTTGACATTCTTGAGCATCAGATGGACCCTTCAAGCAATTTCTATAATTATCGAACAGCTCTTCGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS CAA 72 bp TGTCTGATAAAAGTAGGTTCATTCTTACTTTGCCTATaGGCTTCTCAATCAGAGGGCTTGGAAAGCAAACTG +
Preference number: 6 (lower is better)
Translates to: CLIKVGSFLLCL*ASQSEGLESKL
Trigger: CAGTTTGCTTTCCAAGCCCTCTGATTGAGAAGCCAATAGGCAAAGTAAGAATGAACCTACTTTTATCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514050.6
CDS TCA 72 bp CCCACGAAGAGCTGTTCGATAATTATAGAAATTGCTTaGAGGGTCCATCTGATGCTCAAGAATGTCAAATTT +
Preference number: 6 (lower is better)
Translates to: PTKSCSIIIEIA*RVHLMLKNVKF
Trigger: AAATTTGACATTCTTGAGCATCAGATGGACCCTTCAAGCAATTTCTATAATTATCGAACAGCTCTTCGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264400.7
ENST00000335927.11
ENST00000504863.1
ENST00000509081.5
ENST00000638048.1
CDS CAA 72 bp ATCATAGTGTCTGATAAAAGTAGGTTCATTCTTACTTaGCCTATTGGCTTCTCAATCAGAGGGCTTGGAAAG +
Preference number: 6 (lower is better)
Translates to: IIVSDKSRFILT*PIGFSIRGLGK
Trigger: CTTTCCAAGCCCTCTGATTGAGAAGCCAATAGGCAAAGTAAGAATGAACCTACTTTTATCAGACACTATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514050.6
CDS TCA 72 bp TTTAGAAAAATTTACTCTTCGCCACTGGCTATTCGGTaGGCCAGATCTTTTAAGTTTCTCATCATTCTTTCA +
Preference number: 6 (lower is better)
Translates to: FRKIYSSPLAIR*ARSFKFLIILS
Trigger: TGAAAGAATGATGAGAAACTTAAAAGATCTGGCTCACCGAATAGCCAGTGGCGAAGAGTAAATTTTTCTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514889.1
CDS CCA 72 bp ATTCTTAGCAACCTAGATATAATTCTGTATTATCTATaGTCCCTGCCTACTGTACTGCAATTTCTACTCATT +
Preference number: 6 (lower is better)
Translates to: ILSNLDIILYYL*SLPTVLQFLLI
Trigger: AATGAGTAGAAATTGCAGTACAGTAGGCAGGGACCATAGATAATACAGAATTATATCTAGGTTGCTAAGAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507538.1