Pregenerated sensors for RAMP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000131477Ensembl transcript IDs: ENST00000253796.10, ENST00000587142.5, ENST00000588576.1, ENST00000588928.1, ENST00000589683.5
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGAGTGGGGGTGGGGAAGTaGAGTAACATGGTTGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGVGVGK*SNMVVE Trigger: CTCAACAACCATGTTACTCCACTTCCCCACCCCCAC...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| 3UTR-3UTR CCA 90 bp | GACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATGAGAGTGGGGGTGGGGAAGTaGAGTAACATGGTTGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: DPTWLPFPAIQGSVVGMRVGVGK*SNMVVE Trigger: CTCAACAACCATGTTACTCCACTTCCCCACCCCCAC...TCTCATCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| 3UTR-3UTR CCA 90 bp | GACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATGAGAGGAAGTGGAGTAACATaGTTGTTGAGAAGCTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: DPTWLPFPAIQGSVVGMRGSGVT*LLRSSW Trigger: CCACGAGCTTCTCAACAACCATGTTACTCCACTTCC...TCTCATCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCGGAAGTGGAGTAACATaGTTGTTGAGAAGCTCGTGG | + |
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Preference number: 2 (lower is better) Translates to: EDYRTCAMTPPGFHSQQSGSGVT*LLRSSW Trigger: CCACGAGCTTCTCAACAACCATGTTACTCCACTTCC...GGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| 3UTR-3UTR CAA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGAAGTGGAGTAACATGGTaGTTGAGAAGCTCGTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGSGVTW*LRSSWP Trigger: GGGCCACGAGCTTCTCAACAACCATGTTACTCCACT...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| 3UTR-3UTR CAA 90 bp | CAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTAGTGGAGTAACATGGTaGTTGAGAAGCTCGTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: QNLCHDPTWLPFPAIQGSSGVTW*LRSSWP Trigger: GGGCCACGAGCTTCTCAACAACCATGTTACTCCACT...AGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| 3UTR-3UTR CAA 90 bp | GATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGAGTGGAGTAACATGGTaGTTGAGAAGCTCGTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DYRTCAMTPPGFHSQQSRSGVTW*LRSSWP Trigger: GGGCCACGAGCTTCTCAACAACCATGTTACTCCACT...CCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGAGGGGGCTCGGCTGCGTaGCGCCCAGGACTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGGGSAA*RPGLSR Trigger: CCTGGAGAGTCCTGGGCGCCACGCAGCCGAGCCCCC...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589683.5 |
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| CDS-3UTR GCA 90 bp | GACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATGAGATTTCGGGGGCTCGGCTaGGTGGCGCCCAGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPTWLPFPAIQGSVVGMRFRGLG*VAPRTL Trigger: GAGAGTCCTGGGCGCCACGCAGCCGAGCCCCCGAAA...TCTCATCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATGAGAGAAGAGGGAGGGGGCTaGGAGCTCCAGCGGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPTWLPFPAIQGSVVGMREEGGG*ELQRPL Trigger: GAGAGGCCGCTGGAGCTCCCAGCCCCCTCCCTCTTC...TCTCATCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATGAGACTGGTGTGCCTGTGGTaGGAAGAGGCTGAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DPTWLPFPAIQGSVVGMRLVCLW*EEAEPG Trigger: CCCTGGCTCAGCCTCTTCCCACCACAGGCACACCAG...TCTCATCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATTGTTGAGAAGCTCGTaGCCCCCTAGGCCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGLLRSS*PPRPGP Trigger: AGGCCCAGGCCTAGGGGGCCACGAGCTTCTCAACAA...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGACAGCCCGCGAGGCTaGACAGCTCCCGGAACCCCG | + |
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Preference number: 4 (lower is better) Translates to: DYRTCAMTPPGFHSQQSRDSPRG*TAPGTP Trigger: CGGGGTTCCGGGAGCTGTCCAGCCTCGCGGGCTGTC...CCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589683.5 |
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| CDS-3UTR GCA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGACTTCTGACCCTGGTGTaGCTGTGGTGGGAAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGLLTLV*LWWEEA Trigger: AGCCTCTTCCCACCACAGGCACACCAGGGTCAGAAG...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GGGTGGGGAAGTGGAGTAACATGGTTGTTGAGAAGCTCGTGGCCCCCTAGGCCTACCCTGGTGTGCCTGTaGTGGGAAGAGGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GWGSGVTWLLRSSWPPRPTLVCL*WEEAEP Trigger: TGGCTCAGCCTCTTCCCACCACAGGCACACCAGGGT...AGGCCTAGGGGGCCACGAGCTTCTCAACAACCATGTTACTCCACTTCCCCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588576.1 |
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| CDS-3UTR CCA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGACAGGAGTACATCCTCTaGGGGGTCAGAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGQEYIL*GVREGG Trigger: CCCACCTTCTCTGACCCCCCAGAGGATGTACTCCTG...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATGAGATTGTTGAGAAGCTCGTaGCCCCCTAGGCCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPTWLPFPAIQGSVVGMRLLRSS*PPRPGP Trigger: AGGCCCAGGCCTAGGGGGCCACGAGCTTCTCAACAA...TCTCATCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATCTCTCTTTCGGGTCTaGAGGGGTCGGCAAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGSLFRV*RGRQAA Trigger: AGCAGCTTGCCGACCCCTCCAGACCCGAAAGAGAGA...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000589683.5 |
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| CDS-3UTR GCA 90 bp | GACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATGAGACTTCTGACCCTGGTGTaGCTGTGGTGGGAAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPTWLPFPAIQGSVVGMRLLTLV*LWWEEA Trigger: AGCCTCTTCCCACCACAGGCACACCAGGGTCAGAAG...TCTCATCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGAGCACCAGGGAGCAGTTaGCAAAGTGGATCTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGAPGSS*QSGSGE Trigger: CTCACCAGATCCACTTTGCCAACTGCTCCCTGGTGC...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR TCA 90 bp | GACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATGAGAGGCAGATGGGGGCTATaGTCATGGCCAGGAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: DPTWLPFPAIQGSVVGMRGRWGL*SWPGVH Trigger: ATGTACTCCTGGCCATGATCATAGCCCCCATCTGCC...TCTCATCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR TCA 90 bp | GGGTGGGGAAGTGGAGTAACATGGTTGTTGAGAAGCTCGTGGCCCCCTAGGCCTTGCTATAAGGCCTTCTaGCCCTGGTGTGCCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GWGSGVTWLLRSSWPPRPCYKAF*PWCACG Trigger: ACCACAGGCACACCAGGGTCAGAAGGCCTTATAGCA...AGGCCTAGGGGGCCACGAGCTTCTCAACAACCATGTTACTCCACTTCCCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588576.1 |
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| CDS-3UTR CCA 90 bp | GATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGCTGGTGTGCCTGTGGTaGGAAGAGGCTGAGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DYRTCAMTPPGFHSQQSRLVCLW*EEAEPG Trigger: CCCTGGCTCAGCCTCTTCCCACCACAGGCACACCAG...CCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATGAGAGCACCAGGGAGCAGTTaGCAAAGTGGATCTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DPTWLPFPAIQGSVVGMRAPGSS*QSGSGE Trigger: CTCACCAGATCCACTTTGCCAACTGCTCCCTGGTGC...TCTCATCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGCTGCTCTCCCAGACGTaGAGAAGAGGGAGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: DYRTCAMTPPGFHSQQSRLLSQT*RRGRGL Trigger: CAGCCCCCTCCCTCTTCTCCACGTCTGGGAGAGCAG...CCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589683.5 |
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| CDS-3UTR TCA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGAGGTGAGTCTCAAAGATaGTCCTCTCTGCCAAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGGESQR*SSLPRD Trigger: ATCCCTTGGCAGAGAGGATCATCTTTGAGACTCACC...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR GCA 90 bp | GATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGAGGGGTCGGCAAGCTaGTCTCCCAGACGTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: DYRTCAMTPPGFHSQQSREGSAS*SPRRGE Trigger: TTCTCCACGTCTGGGAGAGCAGCTTGCCGACCCCTC...CCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | TTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGAACCCTGGTGTGCCTGTaGTGGGAAGAGGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQNLCHDPTWLPFPAIQGTLVCL*WEEAEP Trigger: TGGCTCAGCCTCTTCCCACCACAGGCACACCAGGGT...TCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | TTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATTGTTGAGAAGCTCGTaGCCCCCTAGGCCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQNLCHDPTWLPFPAIQGLLRSS*PPRPGP Trigger: AGGCCCAGGCCTAGGGGGCCACGAGCTTCTCAACAA...TCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR TCA 90 bp | GGGTGGGGAAGTGGAGTAACATGGTTGTTGAGAAGCTCGTGGCCCCCTAGGCCTGGTGAGTCTCAAAGATaGTCCTCTCTGCCAAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GWGSGVTWLLRSSWPPRPGESQR*SSLPRD Trigger: ATCCCTTGGCAGAGAGGATCATCTTTGAGACTCACC...AGGCCTAGGGGGCCACGAGCTTCTCAACAACCATGTTACTCCACTTCCCCACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588576.1 |
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| CDS-3UTR TCA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGAGCAAAGTGGATCTGGTaGGTCTCAAAGATGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGAKWIW*VSKMIL Trigger: GAGGATCATCTTTGAGACTCACCAGATCCACTTTGC...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR GCA 90 bp | GACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGATGAGAAAAGATGATCCTCTCTaGCAAGGGATTGGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DPTWLPFPAIQGSVVGMRKDDPL*QGIGEA Trigger: GGCTTCCCCAATCCCTTGGCAGAGAGGATCATCTTT...TCTCATCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGCAGGAGTACATCCTCTaGGGGGTCAGAGAAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DYRTCAMTPPGFHSQQSRQEYIL*GVREGG Trigger: CCCACCTTCTCTGACCCCCCAGAGGATGTACTCCTG...CCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR TCA 90 bp | GGGTGGGGAAGTGGAGTAACATGGTTGTTGAGAAGCTCGTGGCCCCCTAGGCCTGCAAAGTGGATCTGGTaGGTCTCAAAGATGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: GWGSGVTWLLRSSWPPRPAKWIW*VSKMIL Trigger: GAGGATCATCTTTGAGACTCACCAGATCCACTTTGC...AGGCCTAGGGGGCCACGAGCTTCTCAACAACCATGTTACTCCACTTCCCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588576.1 |
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| CDS-3UTR TCA 90 bp | TTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGAGGCAGATGGGGGCTATaGTCATGGCCAGGAGTACAT | + |
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Preference number: 4 (lower is better) Translates to: LQNLCHDPTWLPFPAIQGGRWGL*SWPGVH Trigger: ATGTACTCCTGGCCATGATCATAGCCCCCATCTGCC...TCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR GCA 90 bp | TATTTTGAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGGGAGCGAGGCCATCGTaGAGCAAGGAGGCGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: YFEDYRTCAMTPPGFHSQGARPS*SKEARS Trigger: GCTCCTCGCCTCCTTGCTGCACGATGGCCTCGCTCC...CTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTCAAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000253796.10 |
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| CDS-3UTR GCA 90 bp | GGGTGGGGAAGTGGAGTAACATGGTTGTTGAGAAGCTCGTGGCCCCCTAGGCCTCAGGTCAAACAACTCTaGAAAGTGCTCCAGGCAATC | + |
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Preference number: 4 (lower is better) Translates to: GWGSGVTWLLRSSWPPRPQVKQL*KVLQAI Trigger: GATTGCCTGGAGCACTTTGCAGAGTTGTTTGACCTG...AGGCCTAGGGGGCCACGAGCTTCTCAACAACCATGTTACTCCACTTCCCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588576.1 |
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| CDS-3UTR TCA 90 bp | GATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGACAGAACTTGTGCCATaGCCCCACCTGGCTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: DYRTCAMTPPGFHSQQSRTELVP*PHLASI Trigger: AATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGT...CCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCGCACCAGGGAGCAGTTaGCAAAGTGGATCTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: EDYRTCAMTPPGFHSQQSAPGSS*QSGSGE Trigger: CTCACCAGATCCACTTTGCCAACTGCTCCCTGGTGC...GGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | TTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGAGTGGGGGTGGGGAAGTaGAGTAACATGGTTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQNLCHDPTWLPFPAIQGVGVGK*SNMVVE Trigger: CTCAACAACCATGTTACTCCACTTCCCCACCCCCAC...TCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | GATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGTGGGGGTGGGGAAGTaGAGTAACATGGTTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DYRTCAMTPPGFHSQQSRVGVGK*SNMVVE Trigger: CTCAACAACCATGTTACTCCACTTCCCCACCCCCAC...CCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR TCA 90 bp | CAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGCAAAGTGGATCTGGTaGGTCTCAAAGATGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QNLCHDPTWLPFPAIQGSAKWIW*VSKMIL Trigger: GAGGATCATCTTTGAGACTCACCAGATCCACTTTGC...AGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | TATTTTGAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGACCCTGGTGTGCCTGTaGTGGGAAGAGGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YFEDYRTCAMTPPGFHSQTLVCL*WEEAEP Trigger: TGGCTCAGCCTCTTCCCACCACAGGCACACCAGGGT...CTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTCAAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR GCA 90 bp | TTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGACAGGTCAAACAACTCTaGAAAGTGCTCCAGGCAATC | + |
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Preference number: 4 (lower is better) Translates to: LQNLCHDPTWLPFPAIQGQVKQL*KVLQAI Trigger: GATTGCCTGGAGCACTTTGCAGAGTTGTTTGACCTG...TCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR GCA 90 bp | GAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAAAGATGATCCTCTCTaGCAAGGGATTGGGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: EDYRTCAMTPPGFHSQQSKDDPL*QGIGEA Trigger: GGCTTCCCCAATCCCTTGGCAGAGAGGATCATCTTT...GGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR GCA 90 bp | GATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGAGATTACAGAACTTGTaGCATGACCCCACCTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: DYRTCAMTPPGFHSQQSRRLQNL*HDPTWL Trigger: AAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCT...CCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | TATTTTGAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAGGAGTACATCCTCTaGGGGGTCAGAGAAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: YFEDYRTCAMTPPGFHSQQEYIL*GVREGG Trigger: CCCACCTTCTCTGACCCCCCAGAGGATGTACTCCTG...CTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTCAAAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | TTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGAGGAAGTGGAGTAACATaGTTGTTGAGAAGCTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: LQNLCHDPTWLPFPAIQGGSGVT*LLRSSW Trigger: CCACGAGCTTCTCAACAACCATGTTACTCCACTTCC...TCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR TCA 90 bp | TATTTTGAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGACAGAACTTGTGCCATaGCCCCACCTGGCTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: YFEDYRTCAMTPPGFHSQTELVP*PHLASI Trigger: AATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGT...CTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTCAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR GCA 90 bp | TATTTTGAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGAAAGATGATCCTCTCTaGCAAGGGATTGGGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: YFEDYRTCAMTPPGFHSQKDDPL*QGIGEA Trigger: GGCTTCCCCAATCCCTTGGCAGAGAGGATCATCTTT...CTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTCAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CCA 90 bp | TATTTTGAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGGGAAGTGGAGTAACATaGTTGTTGAGAAGCTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: YFEDYRTCAMTPPGFHSQGSGVT*LLRSSW Trigger: CCACGAGCTTCTCAACAACCATGTTACTCCACTTCC...CTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTCAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS GCA 90 bp | CAGCTCCCGGAACCCCGGAACCGGGATCTATTTCGGGGGCTCGGCTaGGTGGCGCCCAGGACTCTCCAGGGTCTCCCAGGATCGCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: QLPEPRNRDLFRGLG*VAPRTLQGLPGSLP Trigger: GGGGAGCGATCCTGGGAGACCCTGGAGAGTCCTGGGCGCCACGCAGCCGAGCCCCCGAAATAGATCCCGGTTCCGGGGTTCCGGGAGCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000588928.1 ENST00000589683.5 |
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| CDS-3UTR CAA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGACTCTCTGCCAAGGGATaGGGGAAGCCCAGGTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGLSAKG*GKPRSN Trigger: GTTTGACCTGGGCTTCCCCAATCCCTTGGCAGAGAG...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CAA 90 bp | GCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGTGGGGAGGAGTAACATGGTTGTaGAGAAGCTCGTGGCCCCCT | + |
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Preference number: 5 (lower is better) Translates to: AMTPPGFHSQQSRDLWWGGVTWL*RSSWPP Trigger: AGGGGGCCACGAGCTTCTCAACAACCATGTTACTCC...TCCCCACCACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000253796.10 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CAA 90 bp | GGGTGGGGAAGTGGAGTAACATGGTTGTTGAGAAGCTCGTGGCCCCCTAGGCCTGGAGTAACATGGTTGTaGAGAAGCTCGTGGCCCCCT | + |
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Preference number: 5 (lower is better) Translates to: GWGSGVTWLLRSSWPPRPGVTWL*RSSWPP Trigger: AGGGGGCCACGAGCTTCTCAACAACCATGTTACTCC...AGGCCTAGGGGGCCACGAGCTTCTCAACAACCATGTTACTCCACTTCCCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000588576.1 |
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| CDS TCA 90 bp | GAGAAGGTGGGCTGCACCAGGGAGCAGTTGGCAAAGTGGATCTGGTaGGTCTCAAAGATGATCCTCTCTGCCAAGGGATTGGGGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: EKVGCTREQLAKWIW*VSKMILSAKGLGKP Trigger: GGGCTTCCCCAATCCCTTGGCAGAGAGGATCATCTTTGAGACTCACCAGATCCACTTTGCCAACTGCTCCCTGGTGCAGCCCACCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000253796.10 ENST00000587142.5 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CAA 90 bp | GATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGCTCTCTGCCAAGGGATaGGGGAAGCCCAGGTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: DYRTCAMTPPGFHSQQSRLSAKG*GKPRSN Trigger: GTTTGACCTGGGCTTCCCCAATCCCTTGGCAGAGAG...CCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CAA 90 bp | AACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTGTGGGAGTAACATGGTTGTaGAGAAGCTCGTGGCCCCCT | + |
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Preference number: 5 (lower is better) Translates to: NLCHDPTWLPFPAIQGSVGVTWL*RSSWPP Trigger: AGGGGGCCACGAGCTTCTCAACAACCATGTTACTCC...CACAGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CAA 90 bp | GAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCCTCTCTGCCAAGGGATaGGGGAAGCCCAGGTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: EDYRTCAMTPPGFHSQQSLSAKG*GKPRSN Trigger: GTTTGACCTGGGCTTCCCCAATCCCTTGGCAGAGAG...GGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS TCA 90 bp | GCACCAGGGAGCAGTTGGCAAAGTGGATCTGGTGAGTCTCAAAGATaGTCCTCTCTGCCAAGGGATTGGGGAAGCCCAGGTCAAACAACT | + |
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Preference number: 5 (lower is better) Translates to: APGSSWQSGSGESQR*SSLPRDWGSPGQTT Trigger: AGTTGTTTGACCTGGGCTTCCCCAATCCCTTGGCAGAGAGGATCATCTTTGAGACTCACCAGATCCACTTTGCCAACTGCTCCCTGGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000253796.10 ENST00000587142.5 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CAA 90 bp | TTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGAAGTGGAGTAACATGGTaGTTGAGAAGCTCGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LQNLCHDPTWLPFPAIQGSGVTW*LRSSWP Trigger: GGGCCACGAGCTTCTCAACAACCATGTTACTCCACT...TCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CAA 90 bp | GAAGATTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGTGGAGTAACATGGTaGTTGAGAAGCTCGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: EDYRTCAMTPPGFHSQQSSGVTW*LRSSWP Trigger: GGGCCACGAGCTTCTCAACAACCATGTTACTCCACT...GGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS GCA 90 bp | GCAGTTGGCAAAGTGGATCTGGTGAGTCTCAAAGATGATCCTCTCTaGCAAGGGATTGGGGAAGCCCAGGTCAAACAACTCTGCAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: AVGKVDLVSLKDDPL*QGIGEAQVKQLCKV Trigger: CACTTTGCAGAGTTGTTTGACCTGGGCTTCCCCAATCCCTTGGCAGAGAGGATCATCTTTGAGACTCACCAGATCCACTTTGCCAACTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000253796.10 ENST00000587142.5 ENST00000588576.1 ENST00000589683.5 |
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| CDS-3UTR CAA 90 bp | CAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGATCTATGATTCCAGCAAAATaGGACAGCTGTCTCATAGTT | + |
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Preference number: 5 (lower is better) Translates to: QNLCHDPTWLPFPAIQGSMIPAK*DSCLIV Trigger: AACTATGAGACAGCTGTCCAATTTTGCTGGAATCAT...AGATCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS-3UTR CAA 90 bp | TTACAGAACTTGTGCCATGACCCCACCTGGCTTCCATTCCCAGCAATCCAGGGAATGATTCCAGCAAAATaGGACAGCTGTCTCATAGTT | + |
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Preference number: 5 (lower is better) Translates to: LQNLCHDPTWLPFPAIQGMIPAK*DSCLIV Trigger: AACTATGAGACAGCTGTCCAATTTTGCTGGAATCAT...TCCCTGGATTGCTGGGAATGGAAGCCAGGTGGGGTCATGGCACAAGTTCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253796.10 ENST00000589683.5 |
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| CDS CCA 72 bp | GGGTCTGGAGGGGTCGGCAAGCTGCTCTCCCAGACGTaGAGAAGAGGGAGGGGGCTGGGAGCTCCAGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: GSGGVGKLLSQT*RRGRGLGAPAA Trigger: GGCCGCTGGAGCTCCCAGCCCCCTCCCTCTTCTCCACGTCTGGGAGAGCAGCTTGCCGACCCCTCCAGACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000588928.1 ENST00000589683.5 |
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| CDS CCA 72 bp | CCCGGAACCGGGATCTATTTCGGGGGCTCGGCTGCGTaGCGCCCAGGACTCTCCAGGGTCTCCCAGGATCGC | + |
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Preference number: 6 (lower is better) Translates to: PGTGIYFGGSAA*RPGLSRVSQDR Trigger: GCGATCCTGGGAGACCCTGGAGAGTCCTGGGCGCCACGCAGCCGAGCCCCCGAAATAGATCCCGGTTCCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000588928.1 ENST00000589683.5 |
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| CDS GCA 72 bp | GAACCCCGGAACCGGGATCTATTTCGGGGGCTCGGCTaGGTGGCGCCCAGGACTCTCCAGGGTCTCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: EPRNRDLFRGLG*VAPRTLQGLPG Trigger: TCCTGGGAGACCCTGGAGAGTCCTGGGCGCCACGCAGCCGAGCCCCCGAAATAGATCCCGGTTCCGGGGTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000588928.1 ENST00000589683.5 |
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| CDS TCA 72 bp | GGCTGCACCAGGGAGCAGTTGGCAAAGTGGATCTGGTaGGTCTCAAAGATGATCCTCTCTGCCAAGGGATTG | + |
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Preference number: 6 (lower is better) Translates to: GCTREQLAKWIW*VSKMILSAKGL Trigger: CAATCCCTTGGCAGAGAGGATCATCTTTGAGACTCACCAGATCCACTTTGCCAACTGCTCCCTGGTGCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000253796.10 ENST00000587142.5 ENST00000588576.1 ENST00000589683.5 |
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| CDS TCA 72 bp | AGCAGTTGGCAAAGTGGATCTGGTGAGTCTCAAAGATaGTCCTCTCTGCCAAGGGATTGGGGAAGCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSWQSGSGESQR*SSLPRDWGSPG Trigger: ACCTGGGCTTCCCCAATCCCTTGGCAGAGAGGATCATCTTTGAGACTCACCAGATCCACTTTGCCAACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000253796.10 ENST00000587142.5 ENST00000588576.1 ENST00000589683.5 |
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| CDS GCA 72 bp | AAAGTGGATCTGGTGAGTCTCAAAGATGATCCTCTCTaGCAAGGGATTGGGGAAGCCCAGGTCAAACAACTC | + |
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Preference number: 6 (lower is better) Translates to: KVDLVSLKDDPL*QGIGEAQVKQL Trigger: GAGTTGTTTGACCTGGGCTTCCCCAATCCCTTGGCAGAGAGGATCATCTTTGAGACTCACCAGATCCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000253796.10 ENST00000587142.5 ENST00000588576.1 ENST00000589683.5 |
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| CDS CAA 72 bp | GGCCCAGTCGCACCAATCCTTTTCGATAGGATCCATTaGATCCTTATAATGATTCCAGCAAAATTGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: GPVAPILFDRIH*ILIMIPAKLDS Trigger: GCTGTCCAATTTTGCTGGAATCATTATAAGGATCAAATGGATCCTATCGAAAAGGATTGGTGCGACTGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000253796.10 ENST00000587142.5 ENST00000588928.1 ENST00000589683.5 |
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| CDS CAA 90 bp | GCTAATCATGGCCCAGTCGCACCAATCCTTTTCGATAGGATCCATTaGATCCTTATAATGATTCCAGCAAAATTGGACAGCTGTCTCATA | + |
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Preference number: 6 (lower is better) Translates to: ANHGPVAPILFDRIH*ILIMIPAKLDSCLI Trigger: TATGAGACAGCTGTCCAATTTTGCTGGAATCATTATAAGGATCAAATGGATCCTATCGAAAAGGATTGGTGCGACTGGGCCATGATTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000253796.10 ENST00000587142.5 ENST00000588928.1 ENST00000589683.5 |
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