Pregenerated sensors for RAB42 (Homo sapiens)
Ensembl gene IDs: ENSG00000188060Ensembl transcript IDs: ENST00000373826.3, ENST00000465518.3
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAGCTGCCCTGAAGGGAGGGCCTTTCCCAGAGAGTGGGGCAAGCTaGAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: QAALKGGPFPESGAS*SPSSSGTPAAGERV Trigger: AACCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCACTCTCTGGGAAAGGCCCTCCCTTCAGGGCAGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR CCA 90 bp | CGCGGCAGGCTCTGGGTGAGCACATCCTGTCCACTGTCTCATTTGTaGTCACCACCTCCCTTCAAGGTGGGATCTTTTATGAGCCCCATC | + |
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Preference number: 1 (lower is better) Translates to: RGRLWVSTSCPLSHL*SPPPFKVGSFMSPI Trigger: GATGGGGCTCATAAAAGATCCCACCTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR TCA 90 bp | AATGAGAGCTTTTGTCATTCAATTCACAGCGCGGCAGGCTCTGGGTaGGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: NESFCHSIHSAAGSG*AHPVHCLICGHHLP Trigger: AGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTGTGAATTGAATGACAAAAGCTCTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR TCA 90 bp | TGTCTCATTTGTGGTCACCACCTCCCTTCAAGGTGGGATCTTTTATaGGCCCCATCGATAGATAGGGACACTGAGGCTCAAGGACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: CLICGHHLPSRWDLL*APSIDRDTEAQGQE Trigger: TTCCTGTCCTTGAGCCTCAGTGTCCCTATCTATCGATGGGGCTCATAAAAGATCCCACCTTGAAGGGAGGTGGTGACCACAAATGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGCAGCGCGGCAGGCTCTaGGTGAGCACATCCTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: VGQAEVHHPVALQQLGRGQRGRL*VSTSCP Trigger: TGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTG...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGTTGCCCAGGCTGGAGTaGAGTGGCGCAGTCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VGQAEVHHPVALQQLGRGLPRLE*SGAVLA Trigger: AGCCAAGACTGCGCCACTGCACTCCAGCCTGGGCAA...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR TCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGGCGGCAGGCTCTGGGTaGGCACATCCTGTCCACTGT | + |
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Preference number: 2 (lower is better) Translates to: VPQPERGILVAHHSGHCVAAGSG*AHPVHC Trigger: ACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGC...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGGGAATTCCCCGCACCTaGCTTTGCCCATGCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: GFPSQKGGSWWLITVATVGIPRT*LCPCIS Trigger: GCTGATGCATGGGCAAAGGCAGGTGCGGGGAATTCC...CACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGGGAATTCCCCGCACCTaGCTTTGCCCATGCATCAGC | + |
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Preference number: 2 (lower is better) Translates to: VPQPERGILVAHHSGHCVGIPRT*LCPCIS Trigger: GCTGATGCATGGGCAAAGGCAGGTGCGGGGAATTCC...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR CAA 90 bp | CAGCGCGGCAGGCTCTGGGTGAGCACATCCTGTCCACTGTCTCATTaGTGGTCACCACCTCCCTTCAAGGTGGGATCTTTTATGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: QRGRLWVSTSCPLSH*WSPPPFKVGSFMSP Trigger: GGGGCTCATAAAAGATCCCACCTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGAGGCGTGAGCCACCATaGCTGGCCATCAGAACTTTC | + |
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Preference number: 2 (lower is better) Translates to: VPQPERGILVAHHSGHCVRREPP*LAIRTF Trigger: GAAAGTTCTGATGGCCAGGCATGGTGGCTCACGCCT...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR GCA 90 bp | TCATTCAATTCACAGCGCGGCAGGCTCTGGGTGAGCACATCCTGTCCACTGTCTTTGCCCAGGCTGGAGTaGAGTGGCGCAGTCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SFNSQRGRLWVSTSCPLSLPRLE*SGAVLA Trigger: AGCCAAGACTGCGCCACTGCACTCCAGCCTGGGCAA...AGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTGTGAATTGAATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGCCACTGTCTCATTTGTaGTCACCACCTCCCTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: GFPSQKGGSWWLITVATVPLSHL*SPPPFK Trigger: CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGG...CACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGGTGATCCACTGTCCTTaGCCTCCAAAAATGCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: GFPSQKGGSWWLITVATVVIHCP*PPKMLG Trigger: TCCTAGCATTTTTGGAGGCCAAGGACAGTGGATCAC...CACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGAGCCTCTGGAGTAACTaGGATTACAGGCATGCACCA | + |
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Preference number: 2 (lower is better) Translates to: VPQPERGILVAHHSGHCVSLWSN*DYRHAP Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCCAGAGGCT...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CCA 90 bp | TCATTCAATTCACAGCGCGGCAGGCTCTGGGTGAGCACATCCTGTCCACTGTCTGTGATCCACTGTCCTTaGCCTCCAAAAATGCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: SFNSQRGRLWVSTSCPLSVIHCP*PPKMLG Trigger: TCCTAGCATTTTTGGAGGCCAAGGACAGTGGATCAC...AGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTGTGAATTGAATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGGTGAGCCTCTGGAGTAACTaGGATTACAGGCATGCACCA | + |
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Preference number: 2 (lower is better) Translates to: VSTSCPLSHLWSPPPFKVSLWSN*DYRHAP Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCCAGAGGCT...CACCTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGAGCTGGGGAGAGGGTTaGTGGGTTCCCCAGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: KPTETDKVGFDFQSCPELSWGEG*WVPQPE Trigger: TTCTGGCTGGGGAACCCATCAACCCTCTCCCCAGCT...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGGGTGGCTCATCACAGTaGCCACTGTGTGCCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: KPTETDKVGFDFQSCPELGGSSQ*PLCAQH Trigger: ATGTTGGGCACACAGTGGCCACTGTGATGAGCCACC...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR CCA 72 bp | ACAAGCTGCCCTGAAGGGAGGGCCTTTCCCAGAGAGTaGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCC | + |
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Preference number: 3 (lower is better) Translates to: TSCPEGRAFPRE*GKLKSIIQWHS Trigger: GGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCACTCTCTGGGAAAGGCCCTCCCTTCAGGGCAGCTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CAA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGCTCAAGGACAGGAAGTaGCACATCTGGTCTCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: VGQAEVHHPVALQQLGRGLKDRK*HIWSLR Trigger: CCTGAGAGACCAGATGTGCAACTTCCTGTCCTTGAG...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CAA 90 bp | TCATTCAATTCACAGCGCGGCAGGCTCTGGGTGAGCACATCCTGTCCACTGTCTGGTGATCCACTGTCCTaGGCCTCCAAAAATGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: SFNSQRGRLWVSTSCPLSGDPLS*ASKNAR Trigger: CCTAGCATTTTTGGAGGCCAAGGACAGTGGATCACC...AGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTGTGAATTGAATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CAA 90 bp | TGGGTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGGGTGATCCACTGTCCTaGGCCTCCAAAAATGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: WVSTSCPLSHLWSPPPFKGDPLS*ASKNAR Trigger: CCTAGCATTTTTGGAGGCCAAGGACAGTGGATCACC...CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR CCA 72 bp | GAGCTTTTGTCATTCAATTCACAGCGCGGCAGGCTCTaGGTGAGCACATCCTGTCCACTGTCTCATTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: ELLSFNSQRGRL*VSTSCPLSHLW Trigger: CCACAAATGAGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTGTGAATTGAATGACAAAAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR-3UTR CAA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGCAGCTGGGGAGAGGGTaGATGGGTTCCCCAGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: KPTETDKVGFDFQSCPELQLGRG*MGSPAR Trigger: TCTGGCTGGGGAACCCATCAACCCTCTCCCCAGCTG...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR TCA 72 bp | TGTGGTCACCACCTCCCTTCAAGGTGGGATCTTTTATaGGCCCCATCGATAGATAGGGACACTGAGGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: CGHHLPSRWDLL*APSIDRDTEAQ Trigger: TTGAGCCTCAGTGTCCCTATCTATCGATGGGGCTCATAAAAGATCCCACCTTGAAGGGAGGTGGTGACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR TCA 72 bp | AAGGAAGCAGGATTGGGCAAGGGGATAACTTGGCTATaGTGTCACAACAGTGTCCTCAATGAAGCCCACAGA | + |
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Preference number: 3 (lower is better) Translates to: KEAGLGKGITWL*CHNSVLNEAHR Trigger: TCTGTGGGCTTCATTGAGGACACTGTTGTGACATCATAGCCAAGTTATCCCCTTGCCCAATCCTGCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR TCA 72 bp | GATAACTTGGCTATGATGTCACAACAGTGTCCTCAATaGAGCCCACAGAGACTGATAAAGTTGGTTTTGACT | + |
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Preference number: 3 (lower is better) Translates to: DNLAMMSQQCPQ*SPQRLIKLVLT Trigger: AGTCAAAACCAACTTTATCAGTCTCTGTGGGCTTCATTGAGGACACTGTTGTGACATCATAGCCAAGTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGGGTAAAAGGACCTGGTaGTGCACCCGGCGGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: VGQAEVHHPVALQQLGRGGKRTW*CTRRGT Trigger: GGTGCCCCGCCGGGTGCATCACCAGGTCCTTTTACC...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000373826.3 |
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| CDS-3UTR TCA 90 bp | GGGTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGGCGGCAGGCTCTGGGTaGGCACATCCTGTCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: GFPSQKGGSWWLITVATVAAGSG*AHPVHC Trigger: ACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGC...CACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR GCA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGGGAATTCCCCGCACCTaGCTTTGCCCATGCATCAGC | + |
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Preference number: 4 (lower is better) Translates to: VGQAEVHHPVALQQLGRGGIPRT*LCPCIS Trigger: GCTGATGCATGGGCAAAGGCAGGTGCGGGGAATTCC...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGCAGCGCGGCAGGCTCTaGGTGAGCACATCCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VPQPERGILVAHHSGHCVQRGRL*VSTSCP Trigger: TGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTG...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGGGATACAAGCTGCCCTaGAGGGAGGGCCTTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VPQPERGILVAHHSGHCVGYKLP*REGLSQ Trigger: CTGGGAAAGGCCCTCCCTTCAGGGCAGCTTGTATCC...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR GCA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGAGGCGTGAGCCACCATaGCTGGCCATCAGAACTTTC | + |
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Preference number: 4 (lower is better) Translates to: VGQAEVHHPVALQQLGRGRREPP*LAIRTF Trigger: GAAAGTTCTGATGGCCAGGCATGGTGGCTCACGCCT...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR GCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGTTGCCCAGGCTGGAGTaGAGTGGCGCAGTCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: VPQPERGILVAHHSGHCVLPRLE*SGAVLA Trigger: AGCCAAGACTGCGCCACTGCACTCCAGCCTGGGCAA...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGAAGTCCATCATCCAGTaGCACTCCAGCAGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VGQAEVHHPVALQQLGRGKSIIQ*HSSSWG Trigger: TCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTT...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGGAGAGTGGGGCAAGCTaGAGTCCATCATCCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VPQPERGILVAHHSGHCVESGAS*SPSSSG Trigger: GCCACTGGATGATGGACTTCAGCTTGCCCCACTCTC...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | TGGGTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGGCGGCAGGCTCTGGGTaGGCACATCCTGTCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: WVSTSCPLSHLWSPPPFKAAGSG*AHPVHC Trigger: ACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGC...CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | TCATTCAATTCACAGCGCGGCAGGCTCTGGGTGAGCACATCCTGTCCACTGTCTAGCTGGGGAGAGGGTTaGTGGGTTCCCCAGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SFNSQRGRLWVSTSCPLSSWGEG*WVPQPE Trigger: TTCTGGCTGGGGAACCCATCAACCCTCTCCCCAGCT...AGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTGTGAATTGAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGCCACTGTCTCATTTGTaGTCACCACCTCCCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: VGQAEVHHPVALQQLGRGPLSHL*SPPPFK Trigger: CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGG...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | TGGGTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGCAGCGCGGCAGGCTCTaGGTGAGCACATCCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: WVSTSCPLSHLWSPPPFKQRGRL*VSTSCP Trigger: TGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTG...CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGAAGTCCATCATCCAGTaGCACTCCAGCAGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VPQPERGILVAHHSGHCVKSIIQ*HSSSWG Trigger: TCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTT...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGGCCTTTCCCAGAGAGTaGGGCAAGCTGAAGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: VPQPERGILVAHHSGHCVAFPRE*GKLKSI Trigger: GATGGACTTCAGCTTGCCCCACTCTCTGGGAAAGGC...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | GGGTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGAGAGTTGTCCAGAGCTaGGGCAAGAGGGAGTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: GFPSQKGGSWWLITVATVRVVQS*GKRESF Trigger: AAAGGACTCCCTCTTGCCCCAGCTCTGGACAACTCT...CACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGGGGATAACTTGGCTATaGTGTCACAACAGTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VGQAEVHHPVALQQLGRGGITWL*CHNSVL Trigger: GAGGACACTGTTGTGACATCATAGCCAAGTTATCCC...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGCCCAGAGTTGCAGCTTaGCCCGCGGCCCGGCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPTETDKVGFDFQSCPELPRVAA*PAARPA Trigger: TGCGGGCCGGGCCGCGGGTCAAGCTGCAACTCTGGG...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465518.3 |
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| CDS-3UTR GCA 90 bp | GTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGGTGTTGCCCAGGCTGGAGTaGAGTGGCGCAGTCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: VSTSCPLSHLWSPPPFKVLPRLE*SGAVLA Trigger: AGCCAAGACTGCGCCACTGCACTCCAGCCTGGGCAA...CACCTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGCCGAGTGGAAACTCCTaGCCAAGTTTCTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPQPERGILVAHHSGHCVPSGNS*PSFSLS Trigger: CGAGAGAGAGAAACTTGGCCAGGAGTTTCCACTCGG...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | TCATTCAATTCACAGCGCGGCAGGCTCTGGGTGAGCACATCCTGTCCACTGTCTGGGCGTCGGACCGAGTaGAAACTCCTGGCCAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SFNSQRGRLWVSTSCPLSGRRTE*KLLAKF Trigger: AAACTTGGCCAGGAGTTTCCACTCGGTCCGACGCCC...AGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTGTGAATTGAATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR GCA 90 bp | TCATTCAATTCACAGCGCGGCAGGCTCTGGGTGAGCACATCCTGTCCACTGTCTAGGCGTGAGCCACCATaGCTGGCCATCAGAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFNSQRGRLWVSTSCPLSRREPP*LAIRTF Trigger: GAAAGTTCTGATGGCCAGGCATGGTGGCTCACGCCT...AGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTGTGAATTGAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | TCATTCAATTCACAGCGCGGCAGGCTCTGGGTGAGCACATCCTGTCCACTGTCTGGTGGCTCATCACAGTaGCCACTGTGTGCCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SFNSQRGRLWVSTSCPLSGGSSQ*PLCAQH Trigger: ATGTTGGGCACACAGTGGCCACTGTGATGAGCCACC...AGACAGTGGACAGGATGTGCTCACCCAGAGCCTGCCGCGCTGTGAATTGAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGCAACAGTGTCCTCAATaGAGCCCACAGAGACTGATA | + |
|
Preference number: 4 (lower is better) Translates to: VPQPERGILVAHHSGHCVQQCPQ*SPQRLI Trigger: TATCAGTCTCTGTGGGCTTCATTGAGGACACTGTTG...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | TGGGTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGGCCTTTCCCAGAGAGTaGGGCAAGCTGAAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: WVSTSCPLSHLWSPPPFKAFPRE*GKLKSI Trigger: GATGGACTTCAGCTTGCCCCACTCTCTGGGAAAGGC...CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | GTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGGTGCCGAGTGGAAACTCCTaGCCAAGTTTCTCTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSTSCPLSHLWSPPPFKVPSGNS*PSFSLS Trigger: CGAGAGAGAGAAACTTGGCCAGGAGTTTCCACTCGG...CACCTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | TGGGTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGAGAGTTGTCCAGAGCTaGGGCAAGAGGGAGTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WVSTSCPLSHLWSPPPFKRVVQS*GKRESF Trigger: AAAGGACTCCCTCTTGCCCCAGCTCTGGACAACTCT...CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| 3UTR CAA 72 bp | AGGCTCTGGGTGAGCACATCCTGTCCACTGTCTCATTaGTGGTCACCACCTCCCTTCAAGGTGGGATCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLWVSTSCPLSH*WSPPPFKVGSF Trigger: AAAAGATCCCACCTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCAGAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | TGGGTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGAGCCTCTGGAGTAACTaGGATTACAGGCATGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: WVSTSCPLSHLWSPPPFKSLWSN*DYRHAP Trigger: TGGTGCATGCCTGTAATCCCAGTTACTCCAGAGGCT...CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGGGATACAAGCTGCCCTaGAGGGAGGGCCTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPTETDKVGFDFQSCPELGYKLP*REGLSQ Trigger: CTGGGAAAGGCCCTCCCTTCAGGGCAGCTTGTATCC...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | TGGGTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGAAATGGATACCTGTTTaGGGAAGAAAAGGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WVSTSCPLSHLWSPPPFKKWIPV*GRKGSR Trigger: CCTGCTTCCTTTTCTTCCCCAAACAGGTATCCATTT...CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGCCACTGTCTCATTTGTaGTCACCACCTCCCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPTETDKVGFDFQSCPELPLSHL*SPPPFK Trigger: CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGG...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGCAACAGTGTCCTCAATaGAGCCCACAGAGACTGATA | + |
|
Preference number: 4 (lower is better) Translates to: KPTETDKVGFDFQSCPELQQCPQ*SPQRLI Trigger: TATCAGTCTCTGTGGGCTTCATTGAGGACACTGTTG...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR TCA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGGGGATAACTTGGCTATaGTGTCACAACAGTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KPTETDKVGFDFQSCPELGITWL*CHNSVL Trigger: GAGGACACTGTTGTGACATCATAGCCAAGTTATCCC...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGGTGATCCACTGTCCTTaGCCTCCAAAAATGCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPTETDKVGFDFQSCPELVIHCP*PPKMLG Trigger: TCCTAGCATTTTTGGAGGCCAAGGACAGTGGATCAC...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CCA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGAAATGGATACCTGTTTaGGGAAGAAAAGGAAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPTETDKVGFDFQSCPELKWIPV*GRKGSR Trigger: CCTGCTTCCTTTTCTTCCCCAAACAGGTATCCATTT...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS CCA 90 bp | GCCCAGCCACCGTACCCGGCGGGGCACCGAGGGCGTCGGACCGAGTaGAAACTCCTGGCCAAGTTTCTCTCTCTCGAAGCCTCAATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQPPYPAGHRGRRTE*KLLAKFLSLEASIL Trigger: GAGAATTGAGGCTTCGAGAGAGAGAAACTTGGCCAGGAGTTTCCACTCGGTCCGACGCCCTCGGTGCCCCGCCGGGTACGGTGGCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465518.3 |
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| CDS-3UTR CAA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGCAGCTGGGGAGAGGGTaGATGGGTTCCCCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGQAEVHHPVALQQLGRGQLGRG*MGSPAR Trigger: TCTGGCTGGGGAACCCATCAACCCTCTCCCCAGCTG...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS CCA 90 bp | GACCTGGTGATGCACCCGGCGGGGCACCGAGGGCGTCGGACCGAGTaGAAACTCCTGGCCAAGTTTCTCTCTCTCGAAGCCTCAATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: DLVMHPAGHRGRRTE*KLLAKFLSLEASIL Trigger: GAGAATTGAGGCTTCGAGAGAGAGAAACTTGGCCAGGAGTTTCCACTCGGTCCGACGCCCTCGGTGCCCCGCCGGGTGCATCACCAGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373826.3 |
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| CDS-3UTR CAA 90 bp | GGGTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGCAGCTGGGGAGAGGGTaGATGGGTTCCCCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GFPSQKGGSWWLITVATVQLGRG*MGSPAR Trigger: TCTGGCTGGGGAACCCATCAACCCTCTCCCCAGCTG...CACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CAA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGGAAAAGGAAGCAGGATaGGGCAAGGGGATAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGQAEVHHPVALQQLGRGEKEAG*GKGITW Trigger: CCAAGTTATCCCCTTGCCCAATCCTGCTTCCTTTTC...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CAA 90 bp | GTTCCCCAGCCAGAAAGGGGGATCTTGGTGGCTCATCACAGTGGCCACTGTGTGCTCAAGGACAGGAAGTaGCACATCTGGTCTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPQPERGILVAHHSGHCVLKDRK*HIWSLR Trigger: CCTGAGAGACCAGATGTGCAACTTCCTGTCCTTGAG...CACACAGTGGCCACTGTGATGAGCCACCAAGATCCCCCTTTCTGGCTGGGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CAA 90 bp | GTGGGGCAAGCTGAAGTCCATCATCCAGTGGCACTCCAGCAGCTGGGGAGAGGGCAGAGACTGATAAAGTaGGTTTTGACTTTCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VGQAEVHHPVALQQLGRGQRLIK*VLTFRV Trigger: AACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTG...CCCTCTCCCCAGCTGCTGGAGTGCCACTGGATGATGGACTTCAGCTTGCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CAA 90 bp | TGGGTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGGAAAAGGAAGCAGGATaGGGCAAGGGGATAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WVSTSCPLSHLWSPPPFKEKEAG*GKGITW Trigger: CCAAGTTATCCCCTTGCCCAATCCTGCTTCCTTTTC...CTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CAA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGGGTGATCCACTGTCCTaGGCCTCCAAAAATGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPTETDKVGFDFQSCPELGDPLS*ASKNAR Trigger: CCTAGCATTTTTGGAGGCCAAGGACAGTGGATCACC...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CAA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGCTCAAGGACAGGAAGTaGCACATCTGGTCTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPTETDKVGFDFQSCPELLKDRK*HIWSLR Trigger: CCTGAGAGACCAGATGTGCAACTTCCTGTCCTTGAG...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CAA 90 bp | GTGAGCACATCCTGTCCACTGTCTCATTTGTGGTCACCACCTCCCTTCAAGGTGCAGAGACTGATAAAGTaGGTTTTGACTTTCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VSTSCPLSHLWSPPPFKVQRLIK*VLTFRV Trigger: AACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTG...CACCTTGAAGGGAGGTGGTGACCACAAATGAGACAGTGGACAGGATGTGCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS-3UTR CAA 90 bp | AAGCCCACAGAGACTGATAAAGTTGGTTTTGACTTTCAGAGTTGTCCAGAGCTGCTGATAAAGTTGGTTTaGACTTTCAGAGTTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPTETDKVGFDFQSCPELLIKLV*TFRVVQ Trigger: CTGGACAACTCTGAAAGTCAAAACCAACTTTATCAG...CAGCTCTGGACAACTCTGAAAGTCAAAACCAACTTTATCAGTCTCTGTGGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000373826.3 ENST00000465518.3 |
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| CDS CCA 72 bp | CCGTACCCGGCGGGGCACCGAGGGCGTCGGACCGAGTaGAAACTCCTGGCCAAGTTTCTCTCTCTCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PYPAGHRGRRTE*KLLAKFLSLEA Trigger: GGCTTCGAGAGAGAGAAACTTGGCCAGGAGTTTCCACTCGGTCCGACGCCCTCGGTGCCCCGCCGGGTACGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465518.3 |
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| CDS CCA 72 bp | ATGCACCCGGCGGGGCACCGAGGGCGTCGGACCGAGTaGAAACTCCTGGCCAAGTTTCTCTCTCTCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: MHPAGHRGRRTE*KLLAKFLSLEA Trigger: GGCTTCGAGAGAGAGAAACTTGGCCAGGAGTTTCCACTCGGTCCGACGCCCTCGGTGCCCCGCCGGGTGCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373826.3 |
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