Pregenerated sensors for RAB2A (Homo sapiens)
Ensembl gene IDs: ENSG00000104388Ensembl transcript IDs: ENST00000262646.12, ENST00000452437.1, ENST00000481569.1, ENST00000525529.5, ENST00000531289.5, ENST00000534260.5
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAATGTGGAAAAGAACTATTGAGAAGTCCACCTGCTGCCCCAGACTaGGGCACATTAGGGTGGTTGTGGGAGGAGTTATATTTGAGGGTT | + |
|
Preference number: 1 (lower is better) Translates to: ECGKELLRSPPAAPD*GTLGWLWEELYLRV Trigger: AACCCTCAAATATAACTCCTCCCACAACCACCCTAATGTGCCTCAGTCTGGGGCAGCAGGTGGACTTCTCAATAGTTCTTTTCCACATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR TCA 90 bp | CTCACCCTTCCCTCTGCCCTCAAGGAGACAGTTAAAACAAAACTATaGCAGCATTTGGTGATTTCCCACAAGAGTACTGTCAAACCTTTG | + |
|
Preference number: 1 (lower is better) Translates to: LTLPSALKETVKTKL*QHLVISHKSTVKPL Trigger: CAAAGGTTTGACAGTACTCTTGTGGGAAATCACCAAATGCTGTCATAGTTTTGTTTTAACTGTCTCCTTGAGGGCAGAGGGAAGGGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTGTTTCATGTCTCAGCTaGGCAGGAGGAGAGGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVVSCLS*AGGEGV Trigger: CACCCCCTCTCCTCCTGCTCAGCTGAGACATGAAAC...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR-3UTR GCA 90 bp | GAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGAATGTAGAACGAAAGGATTCTTaGCCTGCCGTATCCCATATC | + |
|
Preference number: 2 (lower is better) Translates to: ELECWRASSNQVVKWLNVERKDS*PAVSHI Trigger: GATATGGGATACGGCAGGGCAAGAATCCTTTCGTTC...TACATTCAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTGGAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGGCCGTATCCCATATCTaGAGTTTTATCTGTTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: MLELECWRASSNQVVKWLAVSHI*SFICFP Trigger: TGGGAAACAGATAAAACTTCAGATATGGGATACGGC...CAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTGGAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGTGTAATACGACCTTGTaGTGGAACGAAAGGATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: MLELECWRASSNQVVKWLCNTTL*WNERIL Trigger: AAGAATCCTTTCGTTCCATCACAAGGTCGTATTACA...CAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| 3UTR-3UTR GCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATTTCTTGCTTCTaGCCTTTTCACTCATTATAC | + |
|
Preference number: 2 (lower is better) Translates to: ESTAESSGKTCRKLKAMSEISCF*PFHSLY Trigger: GTATAATGAGTGAAAAGGGCAGAAGCAAGAAATTTC...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTACTGTACATCAAGGTTaGAAAACTGTCCTGCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVTVHQG*KTVLHE Trigger: TTCATGCAGGACAGTTTTTCAACCTTGATGTACAGT...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR-3UTR GCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTTCTTTCAGGCATAAGTaGTTTTGTGCTAGTTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVSFRHK*FCASSG Trigger: TCCTGAACTAGCACAAAAGCACTTATGCCTGAAAGA...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR-3UTR GCA 90 bp | TGGTATTTCCCTCTTTCCTGCCAGATAACAGAGAGAGCATCTTGCATTAGTACATTATTTTGCATTGCTTaGAATGAATGGATAGGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: WYFPLSCQITERASCISTLFCIA*NEWIGP Trigger: TGGCCCTATCCATTCATTGCAAGCAATGCAAAATAA...TGTACTAATGCAAGATGCTCTCTCTGTTATCTGGCAGGAAAGAGGGAAATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTTCAGGAGAAAACACTTaGTTACACTGCTTACACCAT | + |
|
Preference number: 2 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTSGENT*LHCLHH Trigger: ATGGTGTAAGCAGTGTAAGCAAGTGTTTTCTCCTGA...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR-3UTR CCA 90 bp | CAAATTTGGTATTTCCCTCTTTCCTGCCAGATAACAGAGAGAGCATCTTGCATTCACCATATGGTCATGTaGATAAAAGTGGATTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: QIWYFPLSCQITERASCIHHMVM*IKVDFL Trigger: AAGAAAATCCACTTTTATCCACATGACCATATGGTG...AATGCAAGATGCTCTCTCTGTTATCTGGCAGGAAAGAGGGAAATACCAAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| 3UTR-3UTR CCA 90 bp | TTATTCCCAAAGCAGATGACACCATATGGTCATGTGGATAAAAGTGGATTTTCTATTGCTTGCAATGAATaGATAGGGCCACTTACTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LFPKQMTPYGHVDKSGFSIACNE*IGPLTL Trigger: TAAAGTAAGTGGCCCTATCCATTCATTGCAAGCAAT...AGAAAATCCACTTTTATCCACATGACCATATGGTGTCATCTGCTTTGGGAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| 3UTR-3UTR CAA 90 bp | GAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGAATGTAGGAACGAAAGGATTCTaGCCCTGCCGTATCCCATAT | + |
|
Preference number: 3 (lower is better) Translates to: ELECWRASSNQVVKWLNVGTKGF*PCRIPY Trigger: ATATGGGATACGGCAGGGCAAGAATCCTTTCGTTCC...TACATTCAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| 3UTR TCA 72 bp | CCCTCTGCCCTCAAGGAGACAGTTAAAACAAAACTATaGCAGCATTTGGTGATTTCCCACAAGAGTACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PSALKETVKTKL*QHLVISHKSTV Trigger: GACAGTACTCTTGTGGGAAATCACCAAATGCTGTCATAGTTTTGTTTTAACTGTCTCCTTGAGGGCAGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTTTCAGGAGAAAACACTaGCTTACACTGCTTACACCA | + |
|
Preference number: 3 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVFRRKH*LTLLTP Trigger: TGGTGTAAGCAGTGTAAGCAAGTGTTTTCTCCTGAA...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGATGTAGAAATTTCTaGCTTCTGCCCTTTTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVRCRNF*LLPFSL Trigger: GAGTGAAAAGGGCAGAAGCAAGAAATTTCTACATCT...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR GCA 72 bp | GGGAGTAATTTCCAAATTTGGTATTTCCCTCTTTCCTaGCAGATAACAGAGAGAGCATCTTGCATTAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: GSNFQIWYFPLS*QITERASCIST Trigger: TGTACTAATGCAAGATGCTCTCTCTGTTATCTGGCAGGAAAGAGGGAAATACCAAATTTGGAAATTACTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTGAGGTCTTAAGGAAATaGTGGACAAAGCAAACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTEVLRK*WTKQTF Trigger: AAAAGTTTGCTTTGTCCACAATTTCCTTAAGACCTC...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| 3UTR CCA 72 bp | GGGGGATTTATATTATTTTGCATTGCTTGCAATGAATaGATAGGGCCACTTACTTTAATCCATTTCCATAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGFILFCIACNE*IGPLTLIHFHR Trigger: TCTATGGAAATGGATTAAAGTAAGTGGCCCTATCCATTCATTGCAAGCAATGCAAAATAATATAAATCCCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| 3UTR CCA 72 bp | TGCAAAGCCAGACATGAATCAGTTTTTCTGAGTGATTaGAAACATTTTGGTACGATTTATATCCTAACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CKARHESVFLSD*KHFGTIYILTL Trigger: AAGAGTTAGGATATAAATCGTACCAAAATGTTTCCAATCACTCAGAAAAACTGATTCATGTCTGGCTTTGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGCCGCGGCCGCTCAGTaGCAGGGCACACGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSAAAAQ*QGTRLL Trigger: GAGGAGCCGTGTGCCCTGGCACTGAGCGGCCGCGGC...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTGTCAGCCGCCGGGAGTaGGGGGCTGTGAGGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVVSRRE*GAVRKP Trigger: CGGCTTCCTCACAGCCCCTCACTCCCGGCGGCTGAC...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTGCGCCCCAACCCCGGTaGCGCTCAGCCTCGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVAPQPR*RSASKR Trigger: GCGTTTCGAGGCTGAGCGGCACCGGGGTTGGGGCGC...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTGGAAGCCGGACGAACTaGCACCCGCAGAGCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVGSRTN*HPQSRG Trigger: CCCTCGGCTCTGCGGGTGTCAGTTCGTCCGGCTTCC...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCCCTGCTGCCCCAGACTaGGGCACATTAGGGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSPAAPD*GTLGWL Trigger: CAACCACCCTAATGTGCCTCAGTCTGGGGCAGCAGG...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGCCTGCTGTCCTCCCTaGTTGCCTGCATGTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSACCPP*LPACVA Trigger: TGCAACACATGCAGGCAATCAGGGAGGACAGCAGGC...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCATTGAGAAGTCCACCTaGTGCCCCAGACTGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSIEKST*CPRLRH Trigger: GTGCCTCAGTCTGGGGCAGCAGGTGGACTTCTCAAT...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGCGAACTCTACACCTGTaGCCATTCCATCCGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MLELECWRASSNQVVKWLRTLHL*PFHPSR Trigger: TCTGCTCGGATGGAATGGTCACAGGTGTAGAGTTCG...CAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGCTGTCCTCCCTGATTaGCTGCATGTGTTGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSAVLPD*LHVLHW Trigger: CCAATGCAACACATGCAGGCAATCAGGGAGGACAGC...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CCA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTGATAGGCGTACGCCATaGCCGCGGCCGCTCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTDRRTP*PRPLSA Trigger: GGCACTGAGCGGCCGCGGCCATGGCGTACGCCTATC...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGAGGTCATGCACTGGCTaGAACCTCTTGTCTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MLELECWRASSNQVVKWLRSCTG*NLLSVN Trigger: GTTTACAGACAAGAGGTTTCAGCCAGTGCATGACCT...CAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| CDS-3UTR TCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCTTGAGAGAGTACTGCTaGATCTTCAGGGAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSLREYC*IFREDL Trigger: CAGGTCTTCCCTGAAGATTCAGCAGTACTCTCTCAA...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | ATGTTGGAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGTTCCATCCGAGCAGATaGGAAGCTAACACAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLELECWRASSNQVVKWLFHPSR*EANTTA Trigger: AGCAGTTGTGTTAGCTTCTCATCTGCTCGGATGGAA...CAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGGAACGAAAGGATTCTTaGCCTGCCGTATCCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: MLELECWRASSNQVVKWLERKDS*PAVSHI Trigger: GATATGGGATACGGCAGGGCAAGAATCCTTTCGTTC...CAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCTTGGAATTGGAATGCTaGCGGGCATCTTCTAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSLELEC*RASSNQ Trigger: CTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAA...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAGTCCATGTTCTCGTaGAAAAGCTTCACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSESMFS*KSFTFF Trigger: GAAGAAGGTGAAGCTTTTGCACGAGAACATGGACTC...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | GAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGAATGTACACAACTGCTCCTGCTaGAGGATAGCTCTTAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ELECWRASSNQVVKWLNVHNCSC*RIALNS Trigger: ACTGTTAAGAGCTATCCTGCAGCAGGAGCAGTTGTG...TACATTCAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGTCCTGGGCTCCAAGATaGTTTGTTCCAATAGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLELECWRASSNQVVKWLSWAPR*FVPIVR Trigger: CCTTACTATTGGAACAAAGCATCTTGGAGCCCAGGA...CAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| CDS-3UTR TCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCTATGACAGCATTTGGTaGTTTCCCACAAGAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSYDSIW*FPTRVL Trigger: CAGTACTCTTGTGGGAAATCACCAAATGCTGTCATA...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCAACCAGGTTGTCAAGTaGTTGAATGTATCTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSNQVVK*LNVSLR Trigger: ACGGAGAGATACATTCAACCACTTGACAACCTGGTT...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGAACCAGGTTGTCAAGTaGTTGAATGTATCTCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: MLELECWRASSNQVVKWLNQVVK*LNVSLR Trigger: ACGGAGAGATACATTCAACCACTTGACAACCTGGTT...CAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGGTCATGCACTGGCTaGAACCTCTTGTCTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVRSCTG*NLLSVN Trigger: GTTTACAGACAAGAGGTTTCAGCCAGTGCATGACCT...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTGAACGAAAGGATTCTTaGCCTGCCGTATCCCATATC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVERKDS*PAVSHI Trigger: GATATGGGATACGGCAGGGCAAGAATCCTTTCGTTC...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | TGGTATTTCCCTCTTTCCTGCCAGATAACAGAGAGAGCATCTTGCATTAGTACATTGCATTGCTTGCAATaGATGGATAGGGCCACTTAC | + |
|
Preference number: 4 (lower is better) Translates to: WYFPLSCQITERASCISTLHCLQ*MDRATY Trigger: GTAAGTGGCCCTATCCATTCATTGCAAGCAATGCAA...TGTACTAATGCAAGATGCTCTCTCTGTTATCTGGCAGGAAAGAGGGAAATACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTATGTTGGAATTGGAATaGTGGCGGGCATCTTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVMLELE*WRASSN Trigger: GTTAGAAGATGCCCGCCAGCATTCCAATTCCAACAT...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTGCCGTATCCCATATCTaGAGTTTTATCTGTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVAVSHI*SFICFP Trigger: TGGGAAACAGATAAAACTTCAGATATGGGATACGGC...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTTCCTCCCTGATTGCCTaGATGTGTTGCATTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTSSLIA*MCCIGS Trigger: GCTACCAATGCAACACATGCAGGCAATCAGGGAGGA...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCCTTAGGGTATTAAAATaGATGTCCTGGTTTGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESTAESSGKTCRKLKAMSLRVLK*MSWFVV Trigger: AACAACAAACCAGGACATGCATTTTAATACCCTAAG...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTTGTAATACGACCTTGTaGTGGAACGAAAGGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVCNTTL*WNERIL Trigger: AAGAATCCTTTCGTTCCATCACAAGGTCGTATTACA...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTGGGAGGAGTTATATTTaGGGGTTCCATTTTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVGRSYI*GFHFSL Trigger: TAAGGAAAAATGGAACCCTCAAATATAACTCCTCCC...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTATTGCCTGCATGTGTTaGATTGGTAGCAGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTIACMC*IGSSML Trigger: CAGCATGCTGCTACCAATGCAACACATGCAGGCAAT...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTTCAGGAGAAAACACTTaGTTACACTGCTTACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVSGENT*LHCLHH Trigger: ATGGTGTAAGCAGTGTAAGCAAGTGTTTTCTCCTGA...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CCA 90 bp | ATAGGGCCACTTACTTTAATCCATTTCCATAGACAAAGTGTTGCTCTACTAGAATTGGAATTGGAATGCTaGCGGGCATCTTCTAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: IGPLTLIHFHRQSVALLELELEC*RASSNQ Trigger: CTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAA...TTCTAGTAGAGCAACACTTTGTCTATGGAAATGGATTAAAGTAAGTGGCCCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTGAATCATTCTCTTCTTaGTATAGAGCAGTACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVESFSS*YRAVPV Trigger: GACAGGTACTGCTCTATACCAAGAAGAGAATGATTC...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTATGTTACATGTTGAGTaGGACATTGAAAGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVMLHVE*DIESCV Trigger: AACACAGCTTTCAATGTCTCACTCAACATGTAACAT...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | ATAGGGCCACTTACTTTAATCCATTTCCATAGACAAAGTGTTGCTCTACTAGAAGAGTCCATGTTCTCGTaGAAAAGCTTCACCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IGPLTLIHFHRQSVALLEESMFS*KSFTFF Trigger: GAAGAAGGTGAAGCTTTTGCACGAGAACATGGACTC...TTCTAGTAGAGCAACACTTTGTCTATGGAAATGGATTAAAGTAAGTGGCCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| CDS-3UTR TCA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTGTACTGTCAAACCTTTaGGAGAGTACTGCTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTVLSNL*ESTAES Trigger: AGATTCAGCAGTACTCTCTCAAAGGTTTGACAGTAC...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR TCA 90 bp | TTATTTTGCATTGCTTGCAATGAATGGATAGGGCCACTTACTTTAATCCATTTCTATTCCCAAAGCAGATaGCACCATATGGTCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFCIACNEWIGPLTLIHFYSQSR*HHMVMW Trigger: CCACATGACCATATGGTGTCATCTGCTTTGGGAATA...GAAATGGATTAAAGTAAGTGGCCCTATCCATTCATTGCAAGCAATGCAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAAATGTTTAAGGTGTTaGAAAGCCAGACATGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVKCLRC*KARHES Trigger: TGATTCATGTCTGGCTTTGCAACACCTTAAACATTT...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | ATAGGGCCACTTACTTTAATCCATTTCCATAGACAAAGTGTTGCTCTACTAGAATATTTCCCTCTTTCCTaGCAGATAACAGAGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGPLTLIHFHRQSVALLEYFPLS*QITERA Trigger: TGCTCTCTCTGTTATCTGGCAGGAAAGAGGGAAATA...TTCTAGTAGAGCAACACTTTGTCTATGGAAATGGATTAAAGTAAGTGGCCCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| CDS-3UTR CCA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTACATTAGGGTGGTTGTaGGAGGAGTTATATTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTTLGWL*EELYLR Trigger: CCTCAAATATAACTCCTCCCACAACCACCCTAATGT...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CCA 90 bp | CAAATTTGGTATTTCCCTCTTTCCTGCCAGATAACAGAGAGAGCATCTTGCATTATTGCTTGCAATGAATaGATAGGGCCACTTACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QIWYFPLSCQITERASCIIACNE*IGPLTL Trigger: TAAAGTAAGTGGCCCTATCCATTCATTGCAAGCAAT...AATGCAAGATGCTCTCTCTGTTATCTGGCAGGAAAGAGGGAAATACCAAATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| CDS-3UTR TCA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTCACACATCTAAACTCTaGGAAATACAGGTAGATATG | + |
|
Preference number: 4 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTHTSKL*EIQVDM Trigger: CATATCTACCTGTATTTCTCAGAGTTTAGATGTGTG...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTAGTACCTGTCCTAGTTaGCTTAACTTTTTGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTSTCPS*LNFLYS Trigger: TGAGTACAAAAAGTTAAGGCAACTAGGACAGGTACT...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR GCA 90 bp | TTATTCCCAAAGCAGATGACACCATATGGTCATGTGGATAAAAGTGGATTTTCTTTATTTTGCATTGCTTaGAATGAATGGATAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFPKQMTPYGHVDKSGFSLFCIA*NEWIGP Trigger: TGGCCCTATCCATTCATTGCAAGCAATGCAAAATAA...AGAAAATCCACTTTTATCCACATGACCATATGGTGTCATCTGCTTTGGGAATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| CDS-3UTR CCA 90 bp | ATAGGGCCACTTACTTTAATCCATTTCCATAGACAAAGTGTTGCTCTACTAGAACACCATATGGTCATGTaGATAAAAGTGGATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IGPLTLIHFHRQSVALLEHHMVM*IKVDFL Trigger: AAGAAAATCCACTTTTATCCACATGACCATATGGTG...TTCTAGTAGAGCAACACTTTGTCTATGGAAATGGATTAAAGTAAGTGGCCCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| CDS-3UTR CCA 90 bp | TTATTTTGCATTGCTTGCAATGAATGGATAGGGCCACTTACTTTAATCCATTTCAGTAATTTCCAAATTTaGTATTTCCCTCTTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFCIACNEWIGPLTLIHFSNFQI*YFPLSC Trigger: GCAGGAAAGAGGGAAATACCAAATTTGGAAATTACT...GAAATGGATTAAAGTAAGTGGCCCTATCCATTCATTGCAAGCAATGCAAAATAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452437.1 |
||
| CDS TCA 90 bp | CAGGCGCCGCCCGCCGCCGCCGCTGCTGCTGTCAGCCGCCGGGAGTaGGGGGCTGTGAGGAAGCCGGACGAACTGACACCCGCAGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QAPPAAAAAAVSRRE*GAVRKPDELTPAEP Trigger: CGGCTCTGCGGGTGTCAGTTCGTCCGGCTTCCTCACAGCCCCTCACTCCCGGCGGCTGACAGCAGCAGCGGCGGCGGCGGGCGGCGCCTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000262646.12 ENST00000531289.5 |
||
| CDS GCA 90 bp | CCGCTCAGCCTCGAAACGCCAGGCGCCGCCCGCCGCCGCCGCTGCTaGTGTCAGCCGCCGGGAGTGAGGGGCTGTGAGGAAGCCGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: PLSLETPGAARRRRC*CQPPGVRGCEEAGR Trigger: TCGTCCGGCTTCCTCACAGCCCCTCACTCCCGGCGGCTGACAGCAGCAGCGGCGGCGGCGGGCGGCGCCTGGCGTTTCGAGGCTGAGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262646.12 ENST00000531289.5 |
||
| CDS GCA 90 bp | GTGCCGCTCAGCCTCGAAACGCCAGGCGCCGCCCGCCGCCGCCGCTaGTGCTGTCAGCCGCCGGGAGTGAGGGGCTGTGAGGAAGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPLSLETPGAARRRR*CCQPPGVRGCEEAG Trigger: TCCGGCTTCCTCACAGCCCCTCACTCCCGGCGGCTGACAGCAGCAGCGGCGGCGGCGGGCGGCGCCTGGCGTTTCGAGGCTGAGCGGCAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262646.12 ENST00000531289.5 |
||
| CDS-3UTR CAA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCAGCATAATGACCATGTaGGAATTGGAATGCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ESTAESSGKTCRKLKAMSSIMTM*ELECWR Trigger: CCGCCAGCATTCCAATTCCAACATGGTCATTATGCT...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CAA 90 bp | ATGTTGGAATTGGAATGCTGGCGGGCATCTTCTAACCAGGTTGTCAAGTGGTTGCAGGTTGTCAAGTGGTaGAATGTATCTCTCCGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: MLELECWRASSNQVVKWLQVVKW*NVSLRV Trigger: TACACGGAGAGATACATTCAACCACTTGACAACCTG...CAACCACTTGACAACCTGGTTAGAAGATGCCCGCCAGCATTCCAATTCCAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| CDS-3UTR CAA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCTTCAGGAGAAAACACTaGCTTACACTGCTTACACCA | + |
|
Preference number: 5 (lower is better) Translates to: ESTAESSGKTCRKLKAMSFRRKH*LTLLTP Trigger: TGGTGTAAGCAGTGTAAGCAAGTGTTTTCTCCTGAA...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CAA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTGGCACATTAGGGTGGTaGTGGGAGGAGTTATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVGTLGW*WEELYL Trigger: CAAATATAACTCCTCCCACAACCACCCTAATGTGCC...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CAA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTCAGGTTGTCAAGTGGTaGAATGTATCTCTCCGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVQVVKW*NVSLRV Trigger: TACACGGAGAGATACATTCAACCACTTGACAACCTG...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CAA 90 bp | GAGAGTACTGCTGAATCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCAGTTGCCTTAACTTTTaGTACTCACTGGTAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: ESTAESSGKTCRKLKAMSSCLNF*YSLVKT Trigger: TGTCTTTACCAGTGAGTACAAAAAGTTAAGGCAACT...GCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGATTCAGCAGTACTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CAA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTGGAACGAAAGGATTCTaGCCCTGCCGTATCCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTGTKGF*PCRIPY Trigger: ATATGGGATACGGCAGGGCAAGAATCCTTTCGTTCC...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CAA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTTGGGAGGAGTTATATTaGAGGGTTCCATTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVWEELY*RVPFFL Trigger: AAGGAAAAATGGAACCCTCAAATATAACTCCTCCCA...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CAA 90 bp | AGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTAGTTTCAGAGTTAGAACTTGTGGAAAAGAACTATaGAGAAGTCCACCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKLKAMSEMKVVSFRVRTCGKEL*RSPPAA Trigger: GGCAGCAGGTGGACTTCTCAATAGTTCTTTTCCACA...AGTTCTAACTCTGAAACTAACTACTTTCATTTCGCTCATGGCCTTCAACTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS-3UTR CAA 90 bp | TCTTCAGGGAAGACCTGTAGAAAGTTGAAGGCCATGAGCGAAATGAAAGTAGTTGAGGTCTTAAGGAAATaGTGGACAAAGCAAACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSGKTCRKLKAMSEMKVVEVLRK*WTKQTF Trigger: AAAAGTTTGCTTTGTCCACAATTTCCTTAAGACCTC...AACTACTTTCATTTCGCTCATGGCCTTCAACTTTCTACAGGTCTTCCCTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262646.12 |
||
| CDS GCA 72 bp | CTCGAAACGCCAGGCGCCGCCCGCCGCCGCCGCTGCTaGTGTCAGCCGCCGGGAGTGAGGGGCTGTGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LETPGAARRRRC*CQPPGVRGCEE Trigger: TTCCTCACAGCCCCTCACTCCCGGCGGCTGACAGCAGCAGCGGCGGCGGCGGGCGGCGCCTGGCGTTTCGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000262646.12 ENST00000531289.5 |
||
| CDS GCA 72 bp | AACTGCTCCTGCTGCAGGATAGCTCTTAACAGTTTCTaGTTCCTGGGCTCCAAGATGCTTTGTTCCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: NCSCCRIALNSF*FLGSKMLCSCP Trigger: TGGGCAGGAACAAAGCATCTTGGAGCCCAGGAAGCAGAAACTGTTAAGAGCTATCCTGCAGCAGGAGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525529.5 |
||
| CDS GCA 72 bp | AACTGCTCCTGCTGCAGGATAGCTCTTAACAGTTTCTaGTTCCTGGGCTCCAAGATGCTTTGTTCCAATAGT | + |
|
Preference number: 6 (lower is better) Translates to: NCSCCRIALNSF*FLGSKMLCSNS Trigger: ACTATTGGAACAAAGCATCTTGGAGCCCAGGAAGCAGAAACTGTTAAGAGCTATCCTGCAGCAGGAGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534260.5 |
||
| CDS GCA 72 bp | CTTGATTTAACTTCCAGCAAGCTGAGTCAAAGTTTCTaGTCTTACCATGCTTGGATACTGTCTCTTAAATTG | + |
|
Preference number: 6 (lower is better) Translates to: LDLTSSKLSQSF*SYHAWILSLKL Trigger: CAATTTAAGAGACAGTATCCAAGCATGGTAAGAGCAGAAACTTTGACTCAGCTTGCTGGAAGTTAAATCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481569.1 |
||