Pregenerated sensors for RAB28 (Homo sapiens)
Ensembl gene IDs: ENSG00000157869Ensembl transcript IDs: ENST00000288723.9, ENST00000330852.10, ENST00000338176.8, ENST00000508274.5, ENST00000511649.5, ENST00000630951.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTCTGAACCTGACAGAGGGTCACTGCAGCATGAGGCGTATAACGTaGTGGGTGAGAAGTCAGGCAGACCTGGATTTGCATCCCTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: TLNLTEGHCSMRRIT*WVRSQADLDLHPFP Trigger: GGGAAAGGGATGCAAATCCAGGTCTGCCTGACTTCTCACCCATCACGTTATACGCCTCATGCTGCAGTGACCCTCTGTCAGGTTCAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| 3UTR-3UTR TCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGAAAAATGCGCTCACTaGACTGCACACATAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: FQIQGAACHCEAIAMMKQEKCAH*TAHIEL Trigger: AAGCTCTATGTGTGCAGTTCAGTGAGCGCATTTTTC...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000288723.9 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| 3UTR-3UTR TCA 90 bp | ATATCTGCCTTCACCACCCTCTGCACTACTGTACTGAACAGATTCTACTCTGAGTCACTATTTCTGCCCTaGCAATACGCTGTGACTGTT | + |
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Preference number: 2 (lower is better) Translates to: ISAFTTLCTTVLNRFYSESLFLP*QYAVTV Trigger: AACAGTCACAGCGTATTGTCAGGGCAGAAATAGTGA...CTCAGAGTAGAATCTGTTCAGTACAGTAGTGCAGAGGGTGGTGAAGGCAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630951.1 |
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| 3UTR-3UTR TCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAACCTGACAATACGCTGTaGCTGTTCTATTTCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: FQIQGAACHCEAIAMMKQPDNTL*LFYFCF Trigger: AAAGCAGAAATAGAACAGTCACAGCGTATTGTCAGG...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630951.1 |
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| 3UTR-3UTR TCA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAAAGCTGCCTGCCACTGTaGGGCAATAGCAATGATGAA | + |
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Preference number: 2 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQSCLPL*GNSNDE Trigger: TTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCT...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| 3UTR-3UTR TCA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAAGAAAAATGCGCTCACTaGACTGCACACATAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQEKCAH*TAHIEL Trigger: AAGCTCTATGTGTGCAGTTCAGTGAGCGCATTTTTC...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000288723.9 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| 3UTR-3UTR CAA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGAGTAGAGGTGGTATGTaGATTTTCTTCTTCCGGGTA | + |
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Preference number: 3 (lower is better) Translates to: IQGAACHCEAIAMMKQVGSRGGM*IFFFRV Trigger: TACCCGGAAGAAGAAAATCAACATACCACCTCTACT...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630951.1 |
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| 3UTR-3UTR CAA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAAACTCTGAAGTATACTTaGACACATACAAGTTCCGAT | + |
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Preference number: 3 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQTLKYT*THTSSD Trigger: ATCGGAACTTGTATGTGTCAAAGTATACTTCAGAGT...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| 3UTR TCA 72 bp | ATATATTCAGTCATGAAAACAGTTTGTTCGTTCACTTaGAACTGTGTAATAAGCACTTACTCTGAACCTGAC | + |
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Preference number: 3 (lower is better) Translates to: IYSVMKTVCSFT*NCVISTYSEPD Trigger: GTCAGGTTCAGAGTAAGTGCTTATTACACAGTTTCAAGTGAACGAACAAACTGTTTTCATGACTGAATATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR TCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGGGGGGAAGGGAAGGATaGAGGCTCCGGGGGCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGGGREG*RLRGRG Trigger: CCCCCGCCCCCGGAGCCTTCATCCTTCCCTTCCCCC...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 61% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR GCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGAGGAAGGGAGGTAGTTaGGGCAGGACCCCCGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGRKGGS*GRTPAP Trigger: CGGGGCGGGGGTCCTGCCGCAACTACCTCCCTTCCT...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGGGGGAAGGGAAGGATaGAGGCTCCGGGGGCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: FQIQGAACHCEAIAMMKQGGREG*RLRGRG Trigger: CCCCCGCCCCCGGAGCCTTCATCCTTCCCTTCCCCC...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR CCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGCCTCAGAGTCCGACATaGTGTCCCGGGAACCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGPQSPT*CPGNQA Trigger: GGCCTGGTTCCCGGGACACCATGTCGGACTCTGAGG...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR GCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAACGGCAAGCGCCATCTTaGCCACCTCCCCGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQIQGAACHCEAIAMMKQRQAPS*PPPRPL Trigger: CAGAGGGCGGGGAGGTGGGCAAGATGGCGCTTGCCG...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000630951.1 |
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| CDS-3UTR CCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGTTCAGTTGCCGGTCCTaGCTCTCCTCCTCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGFSCRS*LSSSES Trigger: GGACTCTGAGGAGGAGAGCCAGGACCGGCAACTGAA...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR CCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAACCTCAGAGTCCGACATaGTGTCCCGGGAACCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FQIQGAACHCEAIAMMKQPQSPT*CPGNQA Trigger: GGCCTGGTTCCCGGGACACCATGTCGGACTCTGAGG...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAAGGGGGAAGGGAAGGATaGAGGCTCCGGGGGCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQGGREG*RLRGRG Trigger: CCCCCGCCCCCGGAGCCTTCATCCTTCCCTTCCCCC...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGAGCTGCCTGCCACTGTaGGGCAATAGCAATGATGAA | + |
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Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGSCLPL*GNSNDE Trigger: TTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCT...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGTCACTATTTCTGCCCTaGCAATACGCTGTGACTGTT | + |
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Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGSLFLP*QYAVTV Trigger: AACAGTCACAGCGTATTGTCAGGGCAGAAATAGTGA...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000288723.9 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGGTAGAGGTGGTATGTTaGTTTTCTTCTTCCGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGVEVVC*FSSSGY Trigger: GTACCCGGAAGAAGAAAATCAACATACCACCTCTAC...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000288723.9 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGGAAAAATGCGCTCACTaGACTGCACACATAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGEKCAH*TAHIEL Trigger: AAGCTCTATGTGTGCAGTTCAGTGAGCGCATTTTTC...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR GCA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAACGGCAAGCGCCATCTTaGCCACCTCCCCGCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQRQAPS*PPPRPL Trigger: CAGAGGGCGGGGAGGTGGGCAAGATGGCGCTTGCCG...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000630951.1 |
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| CDS-3UTR GCA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAAAGGAAGGGAGGTAGTTaGGGCAGGACCCCCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQRKGGS*GRTPAP Trigger: CGGGGCGGGGGTCCTGCCGCAACTACCTCCCTTCCT...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR GCA 90 bp | GTGAGAAGTCAGGCAGACCTGGATTTGCATCCCTTTCCCATCACTCACCAGTTCGATGGGCTATTCAGTTaGTCTGAGCCTCATTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VRSQADLDLHPFPITHQFDGLFS*SEPHFP Trigger: AGGAAAATGAGGCTCAGAGCAACTGAATAGCCCATC...GAACTGGTGAGTGATGGGAAAGGGATGCAAATCCAGGTCTGCCTGACTTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR TCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGCCTGACAATACGCTGTaGCTGTTCTATTTCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGPDNTL*LFYFCF Trigger: AAAGCAGAAATAGAACAGTCACAGCGTATTGTCAGG...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000288723.9 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | CAGACCTGGATTTGCATCCCTTTCCCATCACTCACCAGTTCACAACCTCAGATGGTAGAGGTGGTATGTTaGTTTTCTTCTTCCGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: QTWICIPFPSLTSSQPQMVEVVC*FSSSGY Trigger: GTACCCGGAAGAAGAAAATCAACATACCACCTCTAC...CATCTGAGGTTGTGAACTGGTGAGTGATGGGAAAGGGATGCAAATCCAGGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR TCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGTCTGCACTACTGTACTaGACAGATTCTACTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGSALLY*TDSTLS Trigger: ACTCAGAGTAGAATCTGTTCAGTACAGTAGTGCAGA...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000288723.9 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAAGCTGCCTGCCACTGTaGGGCAATAGCAATGATGAA | + |
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Preference number: 4 (lower is better) Translates to: FQIQGAACHCEAIAMMKQSCLPL*GNSNDE Trigger: TTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCT...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR GCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGCCTTCACCACCCTCTaGACTACTGTACTGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: FQIQGAACHCEAIAMMKQAFTTL*TTVLNR Trigger: TCTGTTCAGTACAGTAGTGCAGAGGGTGGTGAAGGC...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000288723.9 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | GATTTGCATCCCTTTCCCATCACTCACCAGTTCACAACCTCAGATGGGCTATTCTCACTATTTCTGCCCTaGCAATACGCTGTGACTGTT | + |
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Preference number: 4 (lower is better) Translates to: DLHPFPITHQFTTSDGLFSLFLP*QYAVTV Trigger: AACAGTCACAGCGTATTGTCAGGGCAGAAATAGTGA...GAATAGCCCATCTGAGGTTGTGAACTGGTGAGTGATGGGAAAGGGATGCAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR GCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGATTTATCCAACATTTTaGCTCCTATTGTCTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGIYPTF*LLLSAL Trigger: GAGGGCAGACAATAGGAGGCAAAATGTTGGATAAAT...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR CCA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAACCTCAGAGTCCGACATaGTGTCCCGGGAACCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQPQSPT*CPGNQA Trigger: GGCCTGGTTCCCGGGACACCATGTCGGACTCTGAGG...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | TGGATTTGCATCCCTTTCCCATCACTCACCAGTTCACAACCTCAGATGGGCTATCCTGACAATACGCTGTaGCTGTTCTATTTCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: WICIPFPSLTSSQPQMGYPDNTL*LFYFCF Trigger: AAAGCAGAAATAGAACAGTCACAGCGTATTGTCAGG...ATAGCCCATCTGAGGTTGTGAACTGGTGAGTGATGGGAAAGGGATGCAAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR TCA 90 bp | ATATCTGCCTTCACCACCCTCTGCACTACTGTACTGAACAGATTCTACTCTGAGGTAGAGGTGGTATGTTaGTTTTCTTCTTCCGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: ISAFTTLCTTVLNRFYSEVEVVC*FSSSGY Trigger: GTACCCGGAAGAAGAAAATCAACATACCACCTCTAC...CTCAGAGTAGAATCTGTTCAGTACAGTAGTGCAGAGGGTGGTGAAGGCAGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | TGGATTTGCATCCCTTTCCCATCACTCACCAGTTCACAACCTCAGATGGGCTATTCTGCACTACTGTACTaGACAGATTCTACTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: WICIPFPSLTSSQPQMGYSALLY*TDSTLS Trigger: ACTCAGAGTAGAATCTGTTCAGTACAGTAGTGCAGA...ATAGCCCATCTGAGGTTGTGAACTGGTGAGTGATGGGAAAGGGATGCAAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR GCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAATTGCCTCCTATTGTCTaGCCTCCTATATCCCAAATT | + |
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Preference number: 4 (lower is better) Translates to: FQIQGAACHCEAIAMMKQLPPIV*PPISQI Trigger: AATTTGGGATATAGGAGGGCAGACAATAGGAGGCAA...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR GCA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGGCTCCAAATCAACTGTaGTCCATAGATATATTTATC | + |
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Preference number: 4 (lower is better) Translates to: IQGAACHCEAIAMMKQVGAPNQL*SIDIFI Trigger: GATAAATATATCTATGGAGCACAGTTGATTTGGAGC...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR CCA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAATTCAGTTGCCGGTCCTaGCTCTCCTCCTCAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQFSCRS*LSSSES Trigger: GGACTCTGAGGAGGAGAGCCAGGACCGGCAACTGAA...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAAATGAAATGGCCCTGTaGCTGTTCTATTTCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: FQIQGAACHCEAIAMMKQNEMAL*LFYFCF Trigger: AAAGCAGAAATAGAACAGTCACAGGGCCATTTCATT...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338176.8 |
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| CDS-3UTR GCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAATTTATCCAACATTTTaGCTCCTATTGTCTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: FQIQGAACHCEAIAMMKQIYPTF*LLLSAL Trigger: GAGGGCAGACAATAGGAGGCAAAATGTTGGATAAAT...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | AGTTCACAACCTCAGATGGGCTATTCAGTTGCTCTGAGCCTCATTTTCCTCATCGTTTGTTCGTTCACTTaGAACTGTGTAATAAGCACT | + |
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Preference number: 4 (lower is better) Translates to: SSQPQMGYSVALSLIFLIVCSFT*NCVIST Trigger: AGTGCTTATTACACAGTTTCAAGTGAACGAACAAAC...GATGAGGAAAATGAGGCTCAGAGCAACTGAATAGCCCATCTGAGGTTGTGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR GCA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAATTTATTGTTCGCATATaGTCCAAATCAACTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: FQIQGAACHCEAIAMMKQFIVRI*SKSTVL Trigger: GAGCACAGTTGATTTGGAGCATATGCGAACAATAAA...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR GCA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAAGCCTTCACCACCCTCTaGACTACTGTACTGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQAFTTL*TTVLNR Trigger: TCTGTTCAGTACAGTAGTGCAGAGGGTGGTGAAGGC...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000288723.9 ENST00000630951.1 |
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| CDS-3UTR TCA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAATCTGCACTACTGTACTaGACAGATTCTACTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQSALLY*TDSTLS Trigger: ACTCAGAGTAGAATCTGTTCAGTACAGTAGTGCAGA...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000288723.9 ENST00000630951.1 |
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| CDS-3UTR GCA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAATTTATTGTTCGCATATaGTCCAAATCAACTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQFIVRI*SKSTVL Trigger: GAGCACAGTTGATTTGGAGCATATGCGAACAATAAA...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508274.5 ENST00000630951.1 |
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| CDS CCA 90 bp | CCGGAGGCGCCGTCCCCCAGCACGACGATTTTCAGTTGCCGGTCCTaGCTCTCCTCCTCAGAGTCCGACATGGTGTCCCGGGAACCAGGC | + |
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Preference number: 5 (lower is better) Translates to: PEAPSPSTTIFSCRS*LSSSESDMVSREPG Trigger: GCCTGGTTCCCGGGACACCATGTCGGACTCTGAGGAGGAGAGCCAGGACCGGCAACTGAAAATCGTCGTGCTGGGGGACGGCGCCTCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR CAA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGTCGGCAAGCGCCATCTaGCCCACCTCCCCGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: IQGAACHCEAIAMMKQVGSASAI*PTSPPS Trigger: AGAGGGCGGGGAGGTGGGCAAGATGGCGCTTGCCGA...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000630951.1 |
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| CDS-3UTR CAA 90 bp | ATATCTGCCTTCACCACCCTCTGCACTACTGTACTGAACAGATTCTACTCTGAGTCGGCAAGCGCCATCTaGCCCACCTCCCCGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: ISAFTTLCTTVLNRFYSESASAI*PTSPPS Trigger: AGAGGGCGGGGAGGTGGGCAAGATGGCGCTTGCCGA...CTCAGAGTAGAATCTGTTCAGTACAGTAGTGCAGAGGGTGGTGAAGGCAGATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630951.1 |
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| CDS-3UTR CAA 90 bp | AGGCAGACCTGGATTTGCATCCCTTTCCCATCACTCACCAGTTCACAACCTCAGCAGGCAGACCTGGATTaGCATCCCTTTCCCATCACT | + |
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Preference number: 5 (lower is better) Translates to: RQTWICIPFPSLTSSQPQQADLD*HPFPIT Trigger: AGTGATGGGAAAGGGATGCAAATCCAGGTCTGCCTG...CTGAGGTTGTGAACTGGTGAGTGATGGGAAAGGGATGCAAATCCAGGTCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR CAA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAATCGGCAAGCGCCATCTaGCCCACCTCCCCGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQSASAI*PTSPPS Trigger: AGAGGGCGGGGAGGTGGGCAAGATGGCGCTTGCCGA...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000630951.1 |
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| CDS GCA 90 bp | TTTCCCATCACTCACCAGTTCACAACCTCAGATGGGCTATTCAGTTaGTCTGAGCCTCATTTTCCTCATCTGCACTACTGTACTGAACAG | + |
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Preference number: 5 (lower is better) Translates to: FPITHQFTTSDGLFS*SEPHFPHLHYCTEQ Trigger: CTGTTCAGTACAGTAGTGCAGATGAGGAAAATGAGGCTCAGAGCAACTGAATAGCCCATCTGAGGTTGTGAACTGGTGAGTGATGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR CAA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAACATTTTGCCTCCTATaGTCTGCCCTCCTATATCCC | + |
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Preference number: 5 (lower is better) Translates to: FQIQGAACHCEAIAMMKQTFCLL*SALLYP Trigger: GGGATATAGGAGGGCAGACAATAGGAGGCAAAATGT...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR CAA 90 bp | ATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAGTTGGGTATTTATCCAACATTTaGCCTCCTATTGTCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: IQGAACHCEAIAMMKQVGYLSNI*PPIVCP Trigger: AGGGCAGACAATAGGAGGCAAAATGTTGGATAAATA...CCCAACTTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR CAA 90 bp | TGGATTTGCATCCCTTTCCCATCACTCACCAGTTCACAACCTCAGATGGGCTATAGTAGAGGTGGTATGTaGATTTTCTTCTTCCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: WICIPFPSLTSSQPQMGYSRGGM*IFFFRV Trigger: TACCCGGAAGAAGAAAATCAACATACCACCTCTACT...ATAGCCCATCTGAGGTTGTGAACTGGTGAGTGATGGGAAAGGGATGCAAATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR CAA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAAGTAGAGGTGGTATGTaGATTTTCTTCTTCCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: FQIQGAACHCEAIAMMKQSRGGM*IFFFRV Trigger: TACCCGGAAGAAGAAAATCAACATACCACCTCTACT...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288723.9 ENST00000630951.1 |
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| CDS-3UTR CAA 90 bp | AGAAGTCAGGCAGACCTGGATTTGCATCCCTTTCCCATCACTCACCAGTTCACAAGTTTGTTCGTTCACTaGAAACTGTGTAATAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: RSQADLDLHPFPITHQFTSLFVH*KLCNKH Trigger: GTGCTTATTACACAGTTTCAAGTGAACGAACAAACT...TGTGAACTGGTGAGTGATGGGAAAGGGATGCAAATCCAGGTCTGCCTGACTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511649.5 |
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| CDS-3UTR CAA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAATATTTATCCAACATTTaGCCTCCTATTGTCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: FQIQGAACHCEAIAMMKQYLSNI*PPIVCP Trigger: AGGGCAGACAATAGGAGGCAAAATGTTGGATAAATA...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR CAA 90 bp | TTTCAAATCCAAGGAGCTGCCTGCCACTGTGAGGCAATAGCAATGATGAAGCAAACTCTGAAGTATACTTaGACACATACAAGTTCCGAT | + |
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Preference number: 5 (lower is better) Translates to: FQIQGAACHCEAIAMMKQTLKYT*THTSSD Trigger: ATCGGAACTTGTATGTGTCAAAGTATACTTCAGAGT...TTGCTTCATCATTGCTATTGCCTCACAGTGGCAGGCAGCTCCTTGGATTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR CAA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAAACATTTTGCCTCCTATaGTCTGCCCTCCTATATCCC | + |
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Preference number: 5 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQTFCLL*SALLYP Trigger: GGGATATAGGAGGGCAGACAATAGGAGGCAAAATGT...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS-3UTR CAA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAAAGTAGAGGTGGTATGTaGATTTTCTTCTTCCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQSRGGM*IFFFRV Trigger: TACCCGGAAGAAGAAAATCAACATACCACCTCTACT...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000288723.9 ENST00000630951.1 |
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| CDS-3UTR CAA 90 bp | AAGTATACTTTGACACATACAAGTTCCGATAAGAGAATGAAATTGCTGTGGCAATATTTATCCAACATTTaGCCTCCTATTGTCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: KYTLTHTSSDKRMKLLWQYLSNI*PPIVCP Trigger: AGGGCAGACAATAGGAGGCAAAATGTTGGATAAATA...TTGCCACAGCAATTTCATTCTCTTATCGGAACTTGTATGTGTCAAAGTATACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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| CDS CCA 72 bp | CCGTCCCCCAGCACGACGATTTTCAGTTGCCGGTCCTaGCTCTCCTCCTCAGAGTCCGACATGGTGTCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PSPSTTIFSCRS*LSSSESDMVSR Trigger: CCGGGACACCATGTCGGACTCTGAGGAGGAGAGCCAGGACCGGCAACTGAAAATCGTCGTGCTGGGGGACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000288723.9 ENST00000330852.10 ENST00000338176.8 ENST00000508274.5 ENST00000630951.1 |
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