RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RAB22A (Homo sapiens)

Ensembl gene IDs: ENSG00000124209

Ensembl transcript IDs: ENST00000244040.4, ENST00000488949.1

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAAAGTCAAGCACCACCATGGGCATGGGCACAGGGACTACTCATaGCAGTGGGCCCCACTCTACTTGGGTGGCCAGTGGCCTCTGAAT +
Preference number: 1 (lower is better)
Translates to: SKVKHHHGHGHRDYS*QWAPLYLGGQWPLN
Trigger: ATTCAGAGGCCACTGGCCACCCAAGTAGAGTGGGGCCCACTGGCATGAGTAGTCCCTGTGCCCATGCCCATGGTGGTGCTTGACTTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 90 bp AGGGACTACTCATGCCAGTGGGCCCCACTCTACTTGGGTGGCCAGTaGCCTCTGAATTGGCCTAGAGGAAGAGGTATGCCCAGCTCTTCT +
Preference number: 1 (lower is better)
Translates to: RDYSCQWAPLYLGGQ*PLNWPRGRGMPSSS
Trigger: AGAAGAGCTGGGCATACCTCTTCCTCTAGGCCAATTCAGAGGCCACTGGCCACCCAAGTAGAGTGGGGCCCACTGGCATGAGTAGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 90 bp TGTTGCTGTGACCACGGAAGGCCGCAGGGGAAGGCAGATTACATATaGGAAGGAGGTGTCTGTGGCCATGTGTCTTTAAGGGAGAGCCCA +
Preference number: 1 (lower is better)
Translates to: CCCDHGRPQGKADYI*EGGVCGHVSLRESP
Trigger: TGGGCTCTCCCTTAAAGACACATGGCCACAGACACCTCCTTCGCATATGTAATCTGCCTTCCCCTGCGGCCTTCCGTGGTCACAGCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 90 bp AACTGGCCGTGTTCCCACGGTAAGCGAGCGCTGCTATTCTCTTTCTaGAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTT +
Preference number: 1 (lower is better)
Translates to: NWPCSHGKRALLFSF*SSGVLHLTLASVFL
Trigger: AAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAGAATAGCAGCGCTCGCTTACCGTGGGAACACGGCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 90 bp AAAACAGAATCACACCCTACATATGGGAGGGAGGGTGAGAAATCATaGAATCAGCAAAGGGCTGATGAGATGGACCCACATTGGGCTCGG +
Preference number: 1 (lower is better)
Translates to: KTESHPTYGREGEKS*NQQRADEMDPHWAR
Trigger: CCGAGCCCAATGTGGGTCCATCTCATCAGCCCTTTGCTGATTTCATGATTTCTCACCCTCCCTCCCATATGTAGGGTGTGATTCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 90 bp GCAGTCTTTGGAGAACAGAACTGGTCCATTTCTGTGAATCCTTTTTaGACGGAGAAGACTCAAGACTGGCTAGGTGAAAACTGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: AVFGEQNWSISVNPF*TEKTQDWLGENWWQ
Trigger: CTGCCACCAGTTTTCACCTAGCCAGTCTTGAGTCTTCTCCGTGCAAAAAGGATTCACAGAAATGGACCAGTTCTGTTCTCCAAAGACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 90 bp TACCTTTATACAATACCAATGTGCTTGAGTCTCCCGTTAAGAGGCTaGAAACTGGGCAGGCATACGCAAGACTGGGTGCGAGATTCAATG +
Preference number: 1 (lower is better)
Translates to: YLYTIPMCLSLPLRG*KLGRHTQDWVRDSM
Trigger: CATTGAATCTCGCACCCAGTCTTGCGTATGCCTGCCCAGTTTTCAGCCTCTTAACGGGAGACTCAAGCACATTGGTATTGTATAAAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 90 bp AATATCGAATGCTGGAACTATTCCTTCTATCTAACTGTATTTCTGTaGCCACTAATCAACTTCTGTTCATCCCCAACCCCAGGCCTGCGC +
Preference number: 1 (lower is better)
Translates to: NIECWNYSFYLTVFL*PLINFCSSPTPGLR
Trigger: GCGCAGGCCTGGGGTTGGGGATGAACAGAAGTTGATTAGTGGGCACAGAAATACAGTTAGATAGAAGGAATAGTTCCAGCATTCGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 90 bp ACAAAAGTCCCGATCCTTCCAGACATCCAGAAAGTGCGTACACAATaGGAAACAGGGACTTCAAACAACATCATAAACGGGTCACAAGAA +
Preference number: 1 (lower is better)
Translates to: TKVPILPDIQKVRTQ*ETGTSNNIINGSQE
Trigger: TTCTTGTGACCCGTTTATGATGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAAGGATCGGGACTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 90 bp TTGTTGTTGTTGCTAAGCATTAGAAGGATATTACACGAGAAACAGTaGCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAG +
Preference number: 1 (lower is better)
Translates to: LLLLLSIRRILHEKQ*RVKFLDRLMKMREE
Trigger: CTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTCTCGTGTAATATCCTTCTAATGCTTAGCAACAACAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 90 bp CTAAATCTTTCACCTGCTTCGTGTAAAACTTATTCTGACCACGGCTaGCAGGCAGGTGATGGACACTTAATCATAATCTTACTTTATGTT +
Preference number: 1 (lower is better)
Translates to: LNLSPASCKTYSDHG*QAGDGHLIIILLYV
Trigger: AACATAAAGTAAGATTATGATTAAGTGTCCATCACCTGCCTGTCAGCCGTGGTCAGAATAAGTTTTACACGAAGCAGGTGAAAGATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 90 bp ATCATAGAATCAGAAAAACACTTGTGTGAGAGTTCTGGAGACCATTaGTTTCTAGGATTGGACGCCTGCAAAGAGCTTATTTCAATTTCT +
Preference number: 1 (lower is better)
Translates to: IIESEKHLCESSGDH*FLGLDACKELISIS
Trigger: AGAAATTGAAATAAGCTCTTTGCAGGCGTCCAATCCTAGAAACCAATGGTCTCCAGAACTCTCACACAAGTGTTTTTCTGATTCTATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 90 bp AAATCTTGTAAATTTCCTTCCCCTACAATACTCAGGTTGGAAGGGTaGCAAATTAGACCAGGAACAAATTTTCACCAACTTCACTTCAAT +
Preference number: 1 (lower is better)
Translates to: KSCKFPSPTILRLEG*QIRPGTNFHQLHFN
Trigger: ATTGAAGTGAAGTTGGTGAAAATTTGTTCCTGGTCTAATTTGGCACCCTTCCAACCTGAGTATTGTAGGGGAAGGAAATTTACAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 90 bp TTCCTATTAAATCTTGTAAATTTCCTTCCCCTACAATACTCAGGTTaGAAGGGTGCCAAATTAGACCAGGAACAAATTTTCACCAACTTC +
Preference number: 1 (lower is better)
Translates to: FLLNLVNFLPLQYSG*KGAKLDQEQIFTNF
Trigger: GAAGTTGGTGAAAATTTGTTCCTGGTCTAATTTGGCACCCTTCCAACCTGAGTATTGTAGGGGAAGGAAATTTACAAGATTTAATAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 90 bp GAGATTCTTTACATAATAGAAGTTCACAGACTGAAATATCATTGCTaGAGTCTTTGGAGAACAGAACTGGTCCATTTCTGTGAATCCTTT +
Preference number: 1 (lower is better)
Translates to: EILYIIEVHRLKYHC*SLWRTELVHFCESF
Trigger: AAAGGATTCACAGAAATGGACCAGTTCTGTTCTCCAAAGACTGCAGCAATGATATTTCAGTCTGTGAACTTCTATTATGTAAAGAATCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 90 bp ATTTCTGATGGTATAGACCATCAAATTAAACCTGATCTATGCTATTaGAAGTCCTTCGAGATCTGGAAGGTAAATCATTTTCCTATATGC +
Preference number: 1 (lower is better)
Translates to: ISDGIDHQIKPDLCY*KSFEIWKVNHFPIC
Trigger: GCATATAGGAAAATGATTTACCTTCCAGATCTCGAAGGACTTCCAATAGCATAGATCAGGTTTAATTTGATGGTCTATACCATCAGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CAA 90 bp GGGCATGGGCACAGGGACTACTCATGCCAGTGGGCCCCACTCTACTaGGGTGGCCAGTGGCCTCTGAATTGGCCTAGAGGAAGAGGTATG +
Preference number: 2 (lower is better)
Translates to: GHGHRDYSCQWAPLY*GGQWPLNWPRGRGM
Trigger: CATACCTCTTCCTCTAGGCCAATTCAGAGGCCACTGGCCACCCAAGTAGAGTGGGGCCCACTGGCATGAGTAGTCCCTGTGCCCATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGATTGGTGGCACACACATaGCAAGGTCAGAAGCAAACC +
Preference number: 2 (lower is better)
Translates to: THQGGARMPGIHLDVYRRLVAHT*QGQKQT
Trigger: GGTTTGCTTCTGACCTTGTCATGTGTGTGCCACCAA...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAATCAAGACTGGCTAGGTaGAAACTGGTGGCAGGGACC +
Preference number: 2 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQSRLAR*KLVAGT
Trigger: GGTCCCTGCCACCAGTTTTCACCTAGCCAGTCTTGA...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCAGGGTGGTGCCCGGATaGCTGGGATCCATCTGGATG +
Preference number: 2 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGRVVPG*LGSIWM
Trigger: CATCCAGATGGATCCCAGGCATCCGGGCACCACCCT...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATGGCAGGAGAACTGCTTaGACCCAGGAGACAGGTTGC +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYGRRTA*TQETGC
Trigger: GCAACCTGTCTCCTGGGTTCAAGCAGTTCTCCTGCC...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATGGCAAGCAGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYGKQIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCTGCTTGCC...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACATGGCTAGGTGAAAACTaGTGGCAGGGACCCCAGCCC +
Preference number: 2 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTWLGEN*WQGPQP
Trigger: GGGCTGGGGTCCCTGCCACCAGTTTTCACCTAGCCA...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCCATTGCTGCAGTCTTTaGAGAACAGAACTGGTCCAT +
Preference number: 2 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSHCCSL*RTELVH
Trigger: ATGGACCAGTTCTGTTCTCCAAAGACTGCAGCAATG...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCTCTGTGAATCCTTTTTaGACGGAGAAGACTCAAGAC +
Preference number: 2 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSSVNPF*TEKTQD
Trigger: GTCTTGAGTCTTCTCCGTGCAAAAAGGATTCACAGA...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAATGCACCGAGACACCATaGAATCACCAACAGCTACTG +
Preference number: 2 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQCTETP*NHQQLL
Trigger: CAGTAGCTGTTGGTGATTGCATGGTGTCTCGGTGCA...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACACTCCCGTTAAGAGGCTaGAAACTGGGCAGGCATACG +
Preference number: 2 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTLPLRG*KLGRHT
Trigger: CGTATGCCTGCCCAGTTTTCAGCCTCTTAACGGGAG...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAACTCAGGTTGGAAGGGTaGCAAATTAGACCAGGAACA +
Preference number: 2 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQLRLEG*QIRPGT
Trigger: TGTTCCTGGTCTAATTTGGCACCCTTCCAACCTGAG...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGGGTCGCACATGCTTTaGCTCTTTGGTAATGAGTCA +
Preference number: 2 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQGSHML*LFGNES
Trigger: TGACTCATTACCAAAGAGGCAAAGCATGTGCGACCC...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATAAAGGGCTGATGAGATaGACCCACATTGGGCTCGGT +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYKGLMR*THIGLG
Trigger: ACCGAGCCCAATGTGGGTCCATCTCATCAGCCCTTT...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATTACTTGGGTGGCCAGTaGCCTCTGAATTGGCCTAGA +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYYLGGQ*PLNWPR
Trigger: TCTAGGCCAATTCAGAGGCCACTGGCCACCCAAGTA...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTGCTGAGGGGTTTCCTTaGCAATTTCAATTTTGGCCC +
Preference number: 2 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPAEGFP*QFQFWP
Trigger: GGGCCAAAATTGAAATTGTCAAGGAAACCCCTCAGC...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAAGACTGAAATATCATTaGTGCAGTCTTTGGAGAACA +
Preference number: 2 (lower is better)
Translates to: THQGGARMPGIHLDVYRRRLKYH*CSLWRT
Trigger: TGTTCTCCAAAGACTGCAGCAATGATATTTCAGTCT...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCTATACAATACCAATGTaGTTGAGTCTCCCGTTAAGA +
Preference number: 2 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSYTIPM*LSLPLR
Trigger: TCTTAACGGGAGACTCAAGCACATTGGTATTGTATA...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACACCTTGCCTTTCCCCATaGACCGAGACACCATGCAAT +
Preference number: 2 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTPCLSP*TETPCN
Trigger: ATTGCATGGTGTCTCGGTGCATGGGGAAAGGCAAGG...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAACAGACATCCAGAAAGTaGGTACACAATGGGAAACAG +
Preference number: 2 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQQTSRK*VHNGKQ
Trigger: CTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTG...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGATCTATCCATATTAAGTaGGGGGCACAAAATAATACC +
Preference number: 2 (lower is better)
Translates to: THQGGARMPGIHLDVYRRSIHIK*GAQNNT
Trigger: GGTATTATTTTGTGCCCCCCACTTAATATGGATAGA...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAATTTCCCTGCTTTCACTaGGTATGGATTATGGATCTG +
Preference number: 2 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQFPCFH*VWIMDL
Trigger: CAGATCCATAATCCATACTCAGTGAAAGCAGGGAAA...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATAGAGGAGAGCCAGCCTaGGTTTGTCATTTCCCAAAT +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYRGEPA*VCHFPN
Trigger: ATTTGGGAAATGACAAACTCAGGCTGGCTCTCCTCT...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTGATGACGTTAGATGCTaGGGGGTTTCCTTGACAATT +
Preference number: 2 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPDDVRC*GVSLTI
Trigger: AATTGTCAAGGAAACCCCTCAGCATCTAACGTCATC...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCATGTTCAATGAAAAGTaGTTTAGAGATGGCAGAGAT +
Preference number: 2 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSMFNEK*FRDGRD
Trigger: ATCTCTGCCATCTCTAAAGCACTTTTCATTGAACAT...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTATACGCAAGACTGGGTaGGAGATTCAATGGAATGTC +
Preference number: 2 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPIRKTG*EIQWNV
Trigger: GACATTCCATTGAATCTCGCACCCAGTCTTGCGTAT...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTAGAAAGGGTCGCACATaGTTTGCCTCTTTGGTAATG +
Preference number: 2 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPRKGRT*FASLVM
Trigger: CATTACCAAAGAGGCAAAGCATGTGCGACCCTTTCT...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTCTAGAGGAAGAGGTATaGCCAGCTCTTCTACAAGAT +
Preference number: 2 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPLEEEV*PALLQD
Trigger: ATCTTGTAGAAGAGCTGGGCATACCTCTTCCTCTAG...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATCTAGGTGAAAACTGGTaGCAGGGACCCCAGCCCTCC +
Preference number: 2 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNLGENW*QGPQPS
Trigger: GGAGGGCTGGGGTCCCTGCCACCAGTTTTCACCTAG...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCGAGAAGACTCAAGACTaGCTAGGTGAAAACTGGTGG +
Preference number: 2 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGEKTQD*LGENWW
Trigger: CCACCAGTTTTCACCTAGCCAGTCTTGAGTCTTCTC...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATGAGATGGACCCACATTaGGCTCGGTACAGTAAAACA +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYEMDPH*ARYSKT
Trigger: TGTTTTACTGTACCGAGCCCAATGTGGGTCCATCTC...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCACTGGTCCATTTCTGTaGATCCTTTTTGCACGGAGA +
Preference number: 2 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGTGPFL*ILFARR
Trigger: TCTCCGTGCAAAAAGGATTCACAGAAATGGACCAGT...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCATATGGGAGGGAGGGTaGGAAATCATGAAATCAGCA +
Preference number: 2 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGIWEGG*EIMKSA
Trigger: TGCTGATTTCATGATTTCTCACCCTCCCTCCCATAT...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACACGGCTGACAGGCAGGTaGTGGACACTTAATCATAAT +
Preference number: 2 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTRLTGR*WTLNHN
Trigger: ATTATGATTAAGTGTCCATCACCTGCCTGTCAGCCG...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATATACAGTTAACAGCTTaGCCCCTGAAGGTACATTCC +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYIQLTA*PLKVHS
Trigger: GGAATGTACCTTCAGGGGTCAAGCTGTTAACTGTAT...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTTTACACGAGAAACAGTaGCGAGTCAAGTTCTTAGAC +
Preference number: 2 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPLHEKQ*RVKFLD
Trigger: GTCTAAGAACTTGACTCGGCACTGTTTCTCGTGTAA...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTTTTCCTCCACAGTACTaGATTCAAAAGCTTCCCCAA +
Preference number: 2 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPFPPQY*IQKLPQ
Trigger: TTGGGGAAGCTTTTGAATGCAGTACTGTGGAGGAAA...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAAGGCATACGCAAGACTaGGTGCGAGATTCAATGGAA +
Preference number: 2 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTRHTQD*VRDSME
Trigger: TTCCATTGAATCTCGCACCCAGTCTTGCGTATGCCT...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAGGAAAGCTCCTCAGTTaGTCTGAGGATGCTGTACAA +
Preference number: 2 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTGKLLS*SEDAVQ
Trigger: TTGTACAGCATCCTCAGACCAACTGAGGAGCTTTCC...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATAGAAAAACACTTGTGTaGGAGTTCTGGAGACCATTG +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYRKTLV*EFWRPL
Trigger: CAATGGTCTCCAGAACTCTCACACAAGTGTTTTTCT...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATTTGGCTGATAGGCCTTaGTACTTGAATTCTTGCTCA +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYLADRP*YLNSCS
Trigger: TGAGCAAGAATTCAAGTATCAAGGCCTATCAGCCAA...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATAGCTTCCCCAAACAATaGAAAGTTCCTGAATCAAGC +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYSFPKQ*KVPESS
Trigger: GCTTGATTCAGGAACTTTTCATTGTTTGGGGAAGCT...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAACTGAAATATCATTGCTaGAGTCTTTGGAGAACAGAA +
Preference number: 2 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQLKYHC*SLWRTE
Trigger: TTCTGTTCTCCAAAGACTGCAGCAATGATATTTCAG...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCCTACAATACTCAGGTTaGAAGGGTGCCAAATTAGAC +
Preference number: 2 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGLQYSG*KGAKLD
Trigger: GTCTAATTTGGCACCCTTCCAACCTGAGTATTGTAG...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCTGCCTGGGATCCATCTaGATGTATACAGAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGCLGSI*MYTEES
Trigger: ACTTTCTTCTGTATACATCCAGATGGATCCCAGGCA...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CAA 90 bp AACATTTATAGCCCAGTGAGGTTAGAGAGGAGAGCCAGCCTGAGTTaGTCATTTCCCAAATGTTCTAGAGCAAGTACCAAGTATAGCTCA +
Preference number: 2 (lower is better)
Translates to: NIYSPVRLERRASLS*SFPKCSRASTKYSS
Trigger: TGAGCTATACTTGGTACTTGCTCTAGAACATTTGGGAAATGACAAACTCAGGCTGGCTCTCCTCTCTAACCTCACTGGGCTATAAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATATGCTAAGAGAATCCTaGAAGACCAACAGAGATAGA +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYMLRES*KTNRDR
Trigger: TCTATCTCTGTTGGTCTTTCAGGATTCTCTTAGCAT...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATCATTTTGTGGAGTACTaGGCACCATACAGATCTAAA +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYHFVEY*APYRSK
Trigger: TTTAGATCTGTATGGTGCCCAGTACTCCACAAAATG...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACACTAGGATTGGACGCCTaGAAAGAGCTTATTTCAATT +
Preference number: 2 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTLGLDA*KELISI
Trigger: AATTGAAATAAGCTCTTTGCAGGCGTCCAATCCTAG...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR TCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACACATATGTCTTTATTATaGTTTCCAGATGGGATCTGG +
Preference number: 2 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTHMSLL*FPDGIW
Trigger: CCAGATCCCATCTGGAAATCATAATAAAGACATATG...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR GCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATATAAAACAGGACAAATaGCCCAGAATTCCATTAAAG +
Preference number: 2 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYIKQDK*PRIPLK
Trigger: CTTTAATGGAATTCTGGGGCATTTGTCCTGTTTTAT...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGTTTGGAGAACAGAACTaGTCCATTTCTGTGAATCCT +
Preference number: 2 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPFGEQN*SISVNP
Trigger: AGGATTCACAGAAATGGACCAGTTCTGTTCTCCAAA...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CAA 90 bp TTTCCTATTAAATCTTGTAAATTTCCTTCCCCTACAATACTCAGGTaGGAAGGGTGCCAAATTAGACCAGGAACAAATTTTCACCAACTT +
Preference number: 2 (lower is better)
Translates to: FPIKSCKFPSPTILR*EGCQIRPGTNFHQL
Trigger: AAGTTGGTGAAAATTTGTTCCTGGTCTAATTTGGCACCCTTCCAACCTGAGTATTGTAGGGGAAGGAAATTTACAAGATTTAATAGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp AAGCACCACCATGGGCATGGGCACAGGGACTACTCATaGCAGTGGGCCCCACTCTACTTGGGTGGCCAGTGG +
Preference number: 3 (lower is better)
Translates to: KHHHGHGHRDYS*QWAPLYLGGQW
Trigger: CCACTGGCCACCCAAGTAGAGTGGGGCCCACTGGCATGAGTAGTCCCTGTGCCCATGCCCATGGTGGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 72 bp CAGGAGAACTGCTTGAACCCAGGAGACAGGTTGCAGTaGGCTGAGATCGCGCCACTGCATACCAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: QENCLNPGDRLQ*AEIAPLHTSLG
Trigger: GCCCAGGCTGGTATGCAGTGGCGCGATCTCAGCTCACTGCAACCTGTCTCCTGGGTTCAAGCAGTTCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp CCCAGCAGTGGGAATTCTAGGGACACACCAGGGTGGTaGCCGGATGCCTGGGATCCATCTGGATGTATACAG +
Preference number: 3 (lower is better)
Translates to: PSSGNSRDTPGW*PDAWDPSGCIQ
Trigger: CTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGTCCCTAGAATTCCCACTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 72 bp AGGCCCAGCAGTGGGAATTCTAGGGACACACCAGGGTaGTGCCCGGATGCCTGGGATCCATCTGGATGTATA +
Preference number: 3 (lower is better)
Translates to: RPSSGNSRDTPG*CPDAWDPSGCI
Trigger: TATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGTCCCTAGAATTCCCACTGCTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 72 bp GCCCCACTCTACTTGGGTGGCCAGTGGCCTCTGAATTaGCCTAGAGGAAGAGGTATGCCCAGCTCTTCTACA +
Preference number: 3 (lower is better)
Translates to: APLYLGGQWPLN*PRGRGMPSSST
Trigger: TGTAGAAGAGCTGGGCATACCTCTTCCTCTAGGCCAATTCAGAGGCCACTGGCCACCCAAGTAGAGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTTGGGCCCCACTCTACTaGGGTGGCCAGTGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPWAPLY*GGQWPL
Trigger: CAGAGGCCACTGGCCACCCAAGTAGAGTGGGGCCCA...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 72 bp TCCTTTTTGCACGGAGAAGACTCAAGACTGGCTAGGTaGAAACTGGTGGCAGGGACCCCAGCCCTCCTGTTA +
Preference number: 3 (lower is better)
Translates to: SFLHGEDSRLAR*KLVAGTPALLL
Trigger: TAACAGGAGGGCTGGGGTCCCTGCCACCAGTTTTCACCTAGCCAGTCTTGAGTCTTCTCCGTGCAAAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 72 bp TGTTCCCACGGTAAGCGAGCGCTGCTATTCTCTTTCTaGAGCAGCGGAGTTCTTCACCTAACACTGGCCTCT +
Preference number: 3 (lower is better)
Translates to: CSHGKRALLFSF*SSGVLHLTLAS
Trigger: AGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAGAATAGCAGCGCTCGCTTACCGTGGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp TTGTTAACTGGCCGTGTTCCCACGGTAAGCGAGCGCTaGTATTCTCTTTCTGAAGCAGCGGAGTTCTTCACC +
Preference number: 3 (lower is better)
Translates to: LLTGRVPTVSER*YSLSEAAEFFT
Trigger: GGTGAAGAACTCCGCTGCTTCAGAAAGAGAATAGCAGCGCTCGCTTACCGTGGGAACACGGCCAGTTAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCACATGCTTTGCCTCTTaGGTAATGAGTCAAGCAACC +
Preference number: 3 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSTCFAS*VMSQAT
Trigger: GGTTGCTTGACTCATTACCAAAGAGGCAAAGCATGT...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 72 bp ACAATACCAATGTGCTTGAGTCTCCCGTTAAGAGGCTaGAAACTGGGCAGGCATACGCAAGACTGGGTGCGA +
Preference number: 3 (lower is better)
Translates to: TIPMCLSLPLRG*KLGRHTQDWVR
Trigger: TCGCACCCAGTCTTGCGTATGCCTGCCCAGTTTTCAGCCTCTTAACGGGAGACTCAAGCACATTGGTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATAAAAATCGTTACTGGTaGGGCGCGGTGGCTCACGTC +
Preference number: 3 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYKNRYW*GAVAHV
Trigger: GACGTGAGCCACCGCGCCCAACCAGTAACGATTTTT...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 72 bp AATTCTAGGGACACACCAGGGTGGTGCCCGGATGCCTaGGATCCATCTGGATGTATACAGAAGAAAGTCAAA +
Preference number: 3 (lower is better)
Translates to: NSRDTPGWCPDA*DPSGCIQKKVK
Trigger: TTTGACTTTCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGTCCCTAGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 72 bp GGGGAAGGCAGATTACATATGCGAAGGAGGTGTCTGTaGCCATGTGTCTTTAAGGGAGAGCCCACAGAAAAA +
Preference number: 3 (lower is better)
Translates to: GEGRLHMRRRCL*PCVFKGEPTEK
Trigger: TTTTTCTGTGGGCTCTCCCTTAAAGACACATGGCCACAGACACCTCCTTCGCATATGTAATCTGCCTTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTGAGTTCTGGAGACCATaGGTTTCTAGGATTGGACGC +
Preference number: 3 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPEFWRP*VSRIGR
Trigger: GCGTCCAATCCTAGAAACCAATGGTCTCCAGAACTC...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCTCTACCATCACCATCTaGATCATGAGAGCTTATTTA +
Preference number: 3 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSSTITI*IMRAYL
Trigger: TAAATAAGCTCTCATGATCAAGATGGTGATGGTAGA...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAATTCTGTGAATCCTTTTaGCACGGAGAAGACTCAAGA +
Preference number: 3 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQFCESF*HGEDSR
Trigger: TCTTGAGTCTTCTCCGTGCAAAAAGGATTCACAGAA...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATTCATTGCTGCAGTCTTaGGAGAACAGAACTGGTCCA +
Preference number: 3 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYSLLQS*ENRTGP
Trigger: TGGACCAGTTCTGTTCTCCAAAGACTGCAGCAATGA...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCACAATACCAATGTGCTaGAGTCTCCCGTTAAGAGGC +
Preference number: 3 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGTIPMC*SLPLRG
Trigger: GCCTCTTAACGGGAGACTCAAGCACATTGGTATTGT...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 72 bp CTGCAGTCTTTGGAGAACAGAACTGGTCCATTTCTGTaGATCCTTTTTGCACGGAGAAGACTCAAGACTGGC +
Preference number: 3 (lower is better)
Translates to: LQSLENRTGPFL*ILFARRRLKTG
Trigger: GCCAGTCTTGAGTCTTCTCCGTGCAAAAAGGATTCACAGAAATGGACCAGTTCTGTTCTCCAAAGACTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTGACCAGGTAAATGACTaGAGGTTGGAGCTTAATCTT +
Preference number: 3 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPDQVND*RLELNL
Trigger: AAGATTAAGCTCCAACCTCAAGTCATTTACCTGGTC...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTGAATCAGAAAAACACTaGTGTGAGAGTTCTGGAGAC +
Preference number: 3 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPESEKH*CESSGD
Trigger: GTCTCCAGAACTCTCACACAAGTGTTTTTCTGATTC...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp GGAGAACAGAACTGGTCCATTTCTGTGAATCCTTTTTaGACGGAGAAGACTCAAGACTGGCTAGGTGAAAAC +
Preference number: 3 (lower is better)
Translates to: GEQNWSISVNPF*TEKTQDWLGEN
Trigger: GTTTTCACCTAGCCAGTCTTGAGTCTTCTCCGTGCAAAAAGGATTCACAGAAATGGACCAGTTCTGTTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp ACACAAAAGTCCCGATCCTTCCAGACATCCAGAAAGTaGGTACACAATGGGAAACAGGGACTTCAAACAACA +
Preference number: 3 (lower is better)
Translates to: TQKSRSFQTSRK*VHNGKQGLQTT
Trigger: TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAAGGATCGGGACTTTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 72 bp GTGAGAAATCATGAAATCAGCAAAGGGCTGATGAGATaGACCCACATTGGGCTCGGTACAGTAAAACATCAC +
Preference number: 3 (lower is better)
Translates to: VRNHEISKGLMR*THIGLGTVKHH
Trigger: GTGATGTTTTACTGTACCGAGCCCAATGTGGGTCCATCTCATCAGCCCTTTGCTGATTTCATGATTTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 72 bp CAGGGCAATAAAGCTCTGTCTACACAGCGTAACGAATaGTTTAAAAATAGGGCCACCACTCACGCCTGTAAT +
Preference number: 3 (lower is better)
Translates to: QGNKALSTQRNE*FKNRATTHACN
Trigger: ATTACAGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAGCTTTATTGCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTGAGGTAGAAAAACTCTaGAAGTTGAACGGTAAAACT +
Preference number: 3 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPEVEKL*KLNGKT
Trigger: AGTTTTACCGTTCAACTTCAAGAGTTTTTCTACCTC...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp TGCTGGAACTATTCCTTCTATCTAACTGTATTTCTGTaGCCACTAATCAACTTCTGTTCATCCCCAACCCCA +
Preference number: 3 (lower is better)
Translates to: CWNYSFYLTVFL*PLINFCSSPTP
Trigger: TGGGGTTGGGGATGAACAGAAGTTGATTAGTGGGCACAGAAATACAGTTAGATAGAAGGAATAGTTCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 72 bp TCAGAAAAACACTTGTGTGAGAGTTCTGGAGACCATTaGTTTCTAGGATTGGACGCCTGCAAAGAGCTTATT +
Preference number: 3 (lower is better)
Translates to: SEKHLCESSGDH*FLGLDACKELI
Trigger: AATAAGCTCTTTGCAGGCGTCCAATCCTAGAAACCAATGGTCTCCAGAACTCTCACACAAGTGTTTTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAGTAAATGACTTGAGGTaGGAGCTTAATCTTTTACCC +
Preference number: 3 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTVNDLR*ELNLLP
Trigger: GGGTAAAAGATTAAGCTCCAACCTCAAGTCATTTAC...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR-3UTR CAA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATGTGAAGGTCATAGATTaGCACCATCTTTTGGTAAAA +
Preference number: 3 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYVKVID*HHLLVK
Trigger: TTTTACCAAAAGATGGTGCAAATCTATGACCTTCAC...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 72 bp CTGTATCGAATGTGTAATGGACTGAATGAGGGTAACTaGGATTTCCTTCACCTCGCTTATCTTTTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: LYRMCNGLNEGN*DFLHLAYLFFV
Trigger: CACAAAGAAAAGATAAGCGAGGTGAAGGAAATCCCAGTTACCCTCATTCAGTCCATTACACATTCGATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp AAATTTCCTTCCCCTACAATACTCAGGTTGGAAGGGTaGCAAATTAGACCAGGAACAAATTTTCACCAACTT +
Preference number: 3 (lower is better)
Translates to: KFPSPTILRLEG*QIRPGTNFHQL
Trigger: AAGTTGGTGAAAATTTGTTCCTGGTCTAATTTGGCACCCTTCCAACCTGAGTATTGTAGGGGAAGGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp TTTGGTAAAATAAGACAGAAAGGGTCGCACATGCTTTaGCTCTTTGGTAATGAGTCAAGCAACCTCTGTTTT +
Preference number: 3 (lower is better)
Translates to: FGKIRQKGSHML*LFGNESSNLCF
Trigger: AAAACAGAGGTTGCTTGACTCATTACCAAAGAGGCAAAGCATGTGCGACCCTTTCTGTCTTATTTTACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp TTGCTAAGCATTAGAAGGATATTACACGAGAAACAGTaGCGAGTCAAGTTCTTAGACAGACTGATGAAAATG +
Preference number: 3 (lower is better)
Translates to: LLSIRRILHEKQ*RVKFLDRLMKM
Trigger: CATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTCTCGTGTAATATCCTTCTAATGCTTAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CCA 72 bp AATCTTGTAAATTTCCTTCCCCTACAATACTCAGGTTaGAAGGGTGCCAAATTAGACCAGGAACAAATTTTC +
Preference number: 3 (lower is better)
Translates to: NLVNFLPLQYSG*KGAKLDQEQIF
Trigger: GAAAATTTGTTCCTGGTCTAATTTGGCACCCTTCCAACCTGAGTATTGTAGGGGAAGGAAATTTACAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 72 bp AGAGTTGTACATGTCTTTGAGGTGCCTATGATATTTTaGTACCTGTATCGAATGTGTAATGGACTGAATGAG +
Preference number: 3 (lower is better)
Translates to: RVVHVFEVPMIF*YLYRMCNGLNE
Trigger: CTCATTCAGTCCATTACACATTCGATACAGGTATCAAAATATCATAGGCACCTCAAAGACATGTACAACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp TACATAATAGAAGTTCACAGACTGAAATATCATTGCTaGAGTCTTTGGAGAACAGAACTGGTCCATTTCTGT +
Preference number: 3 (lower is better)
Translates to: YIIEVHRLKYHC*SLWRTELVHFC
Trigger: ACAGAAATGGACCAGTTCTGTTCTCCAAAGACTGCAGCAATGATATTTCAGTCTGTGAACTTCTATTATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR GCA 72 bp TTGGTTCTATTTATTCACTTCCCACATTATGTCCAATaGAACTTCATCACAATAGGCCTCTCACTTATCATT +
Preference number: 3 (lower is better)
Translates to: LVLFIHFPHYVQ*NFITIGLSLII
Trigger: AATGATAAGTGAGAGGCCTATTGTGATGAAGTTGCATTGGACATAATGTGGGAAGTGAATAAATAGAACCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR TCA 72 bp TTAATTAGTTATCATAGAATCAGAAAAACACTTGTGTaGGAGTTCTGGAGACCATTGGTTTCTAGGATTGGA +
Preference number: 3 (lower is better)
Translates to: LISYHRIRKTLV*EFWRPLVSRIG
Trigger: TCCAATCCTAGAAACCAATGGTCTCCAGAACTCTCACACAAGTGTTTTTCTGATTCTATGATAACTAATTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAAGCAAGAGCATCCCCTaGCGCCGCTGCCGCCGCACG +
Preference number: 4 (lower is better)
Translates to: THQGGARMPGIHLDVYRRSKSIP*RRCRRT
Trigger: CGTGCGGCGGCAGCGGCGCCAGGGGATGCTCTTGCT...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CAA 72 bp CACAGGGACTACTCATGCCAGTGGGCCCCACTCTACTaGGGTGGCCAGTGGCCTCTGAATTGGCCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: HRDYSCQWAPLY*GGQWPLNWPRG
Trigger: TCCTCTAGGCCAATTCAGAGGCCACTGGCCACCCAAGTAGAGTGGGGCCCACTGGCATGAGTAGTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCAGGGTGGTGCCCGGATaGCTGGGATCCATCTGGATG +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSRVVPG*LGSIWM
Trigger: CATCCAGATGGATCCCAGGCATCCGGGCACCACCCT...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAGTGAGCAGTCCCTGTTaGTGTGACCACGGAAGGCCG +
Preference number: 4 (lower is better)
Translates to: THQGGARMPGIHLDVYRRVSSPC*CDHGRP
Trigger: CGGCCTTCCGTGGTCACAGCAACAGGGACTGCTCAC...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGATCAAGTCTGAGAGGCTaGGGTTCGGTCAGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: THQGGARMPGIHLDVYRRSSLRG*GSVSSS
Trigger: GCTGCTGCTGACCGAACCTCAGCCTCTCAGACTTGA...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAACCCAGCTGGAGGGGGTaGGCAGTCCCTGTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQPSWRG*AVPVAV
Trigger: CACAGCAACAGGGACTGCTCACCCCCTCCAGCTGGG...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCGCCGCCGCCCTAAGTTaGGAAGGGAGAGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGAAALS*EGRGQA
Trigger: GGCCTGGCCTCTCCCTTCTCAACTTAGGGCGGCGGC...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCCTCCCGTTAAGAGGCTaGAAACTGGGCAGGCATACG +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSLPLRG*KLGRHT
Trigger: CGTATGCCTGCCCAGTTTTCAGCCTCTTAACGGGAG...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTGGAGACAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPGDRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTGTCTCC...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGGCAGGAGAACTGCTTaGACCCAGGAGACAGGTTGC +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQGRRTA*TQETGC
Trigger: GCAACCTGTCTCCTGGGTTCAAGCAGTTCTCCTGCC...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACACAGTCCCTGTTGCTGTaGCCACGGAAGGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTQSLLL*PRKAAG
Trigger: CCCTGCGGCCTTCCGTGGTCACAGCAACAGGGACTG...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCGTCGGCGTAGTCCTTTaGATCTCTCTCCATGACTTC +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSVGVVL*ISLHDF
Trigger: GAAGTCATGGAGAGAGATGCAAAGGACTACGCCGAC...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAACACAGGGACTACTCATaGCAGTGGGCCCCACTCTAC +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQHRDYS*QWAPLY
Trigger: GTAGAGTGGGGCCCACTGGCATGAGTAGTCCCTGTG...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATAGGGACACACCAGGGTaGTGCCCGGATGCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYRDTPG*CPDAWD
Trigger: ATCCCAGGCATCCGGGCACCACCCTGGTGTGTCCCT...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCACCACCATGGGCATaGGCACAGGGACTACTCATG +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQAPPWA*AQGLLM
Trigger: CATGAGTAGTCCCTGTGCCCATGCCCATGGTGGTGC...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCCGAAGGAGGTGTCTGTaGCCATGTGTCTTTAAGGGA +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSRRRCL*PCVFKG
Trigger: TCCCTTAAAGACACATGGCCACAGACACCTCCTTCG...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTGGCAGGAGAATTGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPGRRIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCC...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATGCCCTTACCGCCAGATaGCAGGTTGGCGTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYALTAR*QVGVSG
Trigger: TCCACTGACGCCAACCTGCCATCTGGCGGTAAGGGC...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCTGGCTAGGTGAAAACTaGTGGCAGGGACCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGWLGEN*WQGPQP
Trigger: GGGCTGGGGTCCCTGCCACCAGTTTTCACCTAGCCA...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAAGTTCTGGAGACCATTaGTTTCTAGGATTGGACGCC +
Preference number: 4 (lower is better)
Translates to: THQGGARMPGIHLDVYRRSSGDH*FLGLDA
Trigger: GGCGTCCAATCCTAGAAACCAATGGTCTCCAGAACT...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCGAGGGTGAGAAATCATaGAATCAGCAAAGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSEGEKS*NQQRAD
Trigger: ATCAGCCCTTTGCTGATTTCATGATTTCTCACCCTC...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAGATGACGTTAGATGCTaGGGGGTTTCCTTGACAATT +
Preference number: 4 (lower is better)
Translates to: THQGGARMPGIHLDVYRRDDVRC*GVSLTI
Trigger: AATTGTCAAGGAAACCCCTCAGCATCTAACGTCATC...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAACTGACCAGTCCCTCTaGCATCACGTGTATGAGCCA +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQTDQSL*HHVYEP
Trigger: TGGCTCATACACGTGATGTCAGAGGGACTGGTCAGT...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCAACTACAATATTAGGTaGGCCATGCTGTCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSNYNIR*AMLSKL
Trigger: GAGCTTCGACAGCATGGCCCACCTAATATTGTAGTT...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAATACTTGGGTGGCCAGTaGCCTCTGAATTGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQYLGGQ*PLNWPR
Trigger: TCTAGGCCAATTCAGAGGCCACTGGCCACCCAAGTA...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCGCTCCGCTTTGGCTCTaGAGGCTGTCTTCGGAGTTT +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGAPLWL*RLSSEF
Trigger: AAACTCCGAAGACAGCCTTCAGAGCCAAAGCGGAGC...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAAGAAAAACACTTGTGTaGGAGTTCTGGAGACCATTG +
Preference number: 4 (lower is better)
Translates to: THQGGARMPGIHLDVYRRRKTLV*EFWRPL
Trigger: CAATGGTCTCCAGAACTCTCACACAAGTGTTTTTCT...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAGTGGCCAGTGGCCTCTaGATTGGCCTAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTVASGL*IGLEEE
Trigger: CTCTTCCTCTAGGCCAATTCAGAGGCCACTGGCCAC...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTCACTGCAGCATTCCATaGCAGGTAACCAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPHCSIP*QVTRPC
Trigger: ACATGGCCTGGTTACCTGTCATGGAATGCTGCAGTG...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAATAAACGATTATAGCTaGAGCCGACCCTCGATAGTA +
Preference number: 4 (lower is better)
Translates to: THQGGARMPGIHLDVYRRINDYS*SRPSIV
Trigger: TACTATCGAGGGTCGGCTGCAGCTATAATCGTTTAT...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAATAAAGCGAGAAGTCTaGTTCAATCACAGAGACGGT +
Preference number: 4 (lower is better)
Translates to: THQGGARMPGIHLDVYRRIKREV*FNHRDG
Trigger: ACCGTCTCTGTGATTGAAGCAGACTTCTCGCTTTAT...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCGTTGGCGTCAGTGGATaGAATTCTTCGACTAATTTC +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSVGVSG*NSSTNF
Trigger: GAAATTAGTCGAAGAATTCCATCCACTGACGCCAAC...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCCTACAATACTCAGGTTaGAAGGGTGCCAAATTAGAC +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSLQYSG*KGAKLD
Trigger: GTCTAATTTGGCACCCTTCCAACCTGAGTATTGTAG...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCAAAATCCTAGGGGCATaGAGCATCCACATGTCTTTT +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSKILGA*SIHMSF
Trigger: AAAAGACATGTGGATGCTCCATGCCCCTAGGATTTT...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCTGCCTGGGATCCATCTaGATGTATACAGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSCLGSI*MYTEES
Trigger: ACTTTCTTCTGTATACATCCAGATGGATCCCAGGCA...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGCGAGCAGACACACTTTaGGCTCCCTCAGCGCCATGG +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPRADTL*APSAPW
Trigger: CCATGGCGCTGAGGGAGCTCAAAGTGTGTCTGCTCG...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATCCTTGCCTTTCCCCATaGACCGAGACACCATGCAAT +
Preference number: 4 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYPCLSP*TETPCN
Trigger: ATTGCATGGTGTCTCGGTGCATGGGGAAAGGCAAGG...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGTAACCATGAGCAAATaGCTTTCTGAGCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQVTMSK*LSELEA
Trigger: AGCCTCCAGCTCAGAAAGGCATTTGCTCATGGTTAC...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCTTATGTAGCTCATTTTaGTACTGGACAGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSLCSSF*YWTVLV
Trigger: GACCAAGACTGTCCAGTACCAAAATGAGCTACATAA...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCTTTGGAGAACAGAACTaGTCCATTTCTGTGAATCCT +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSFGEQN*SISVNP
Trigger: AGGATTCACAGAAATGGACCAGTTCTGTTCTCCAAA...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCAAAGGGCTGATGAGATaGACCCACATTGGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGKGLMR*THIGLG
Trigger: ACCGAGCCCAATGTGGGTCCATCTCATCAGCCCTTT...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCCTTACGGCTTTTAATTaGCTGATAGGCCTTGATACT +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSLTAFN*LIGLDT
Trigger: AGTATCAAGGCCTATCAGCCAATTAAAAGCCGTAAG...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CAA 72 bp AGCCCAGTGAGGTTAGAGAGGAGAGCCAGCCTGAGTTaGTCATTTCCCAAATGTTCTAGAGCAAGTACCAAG +
Preference number: 4 (lower is better)
Translates to: SPVRLERRASLS*SFPKCSRASTK
Trigger: CTTGGTACTTGCTCTAGAACATTTGGGAAATGACAAACTCAGGCTGGCTCTCCTCTCTAACCTCACTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAACTGACATCACGTGTATaGGCCACGTTAAGACAGTTT +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQLTSRV*ATLRQF
Trigger: AAACTGTCTTAACGTGGCTCATACACGTGATGTCAG...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTATATTAGGTGGGCCATaGTGTCGAAGCTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPILGGP*CRSSFT
Trigger: GGTGAAAGAGCTTCGACAGCATGGCCCACCTAATAT...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCAGACTGAAATATCATTaGTGCAGTCTTTGGAGAACA +
Preference number: 4 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSRLKYH*CSLWRT
Trigger: TGTTCTCCAAAGACTGCAGCAATGATATTTCAGTCT...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATGACACACCAGGGTGGTaGCCGGATGCCTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNDTPGW*PDAWDP
Trigger: TGGATCCCAGGCATCCGGGCACCACCCTGGTGTGTC...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCAGCTGGAGGCTGACATaGCAATTAGTGCAGTGTCGT +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGSWRLT*QLVQCR
Trigger: ACGACACTGCACTAATTGGCATGTCAGCCTCCAGCT...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATGTAATCCCAGAATGTTaGGAAGCCGAGGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYVIPEC*EAEASR
Trigger: TCTGCTTGCCTCGGCTTCGCAACATTCTGGGATTAC...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTAAGGCAGATTACATATaGGAAGGAGGTGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPKADYI*EGGVCG
Trigger: GCCACAGACACCTCCTTCGCATATGTAATCTGCCTT...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACATGGTGCCCGGATGCCTaGGATCCATCTGGATGTATA +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTWCPDA*DPSGCI
Trigger: TATACATCCAGATGGATCCCAGGCATCCGGGCACCA...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAACCTGATCTATGCTATTaGAAGTCCTTCGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQPDLCY*KSFEIW
Trigger: CCAGATCTCGAAGGACTTCCAATAGCATAGATCAGG...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCCAGTGGCCTCTGAATTaGCCTAGAGGAAGAGGTATG +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGQWPLN*PRGRGM
Trigger: CATACCTCTTCCTCTAGGCCAATTCAGAGGCCACTG...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACACTTCATCATCAAGTCTaGGAGGCTGAGGTTCGGTCA +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTLHHQV*EAEVRS
Trigger: TGACCGAACCTCAGCCTCTCAGACTTGATGATGAAG...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTACTGGTCCATTTCTGTaGATCCTTTTTGCACGGAGA +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPTGPFL*ILFARR
Trigger: TCTCCGTGCAAAAAGGATTCACAGAAATGGACCAGT...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCAGGCCTGCGCATTTCTaGCTGTGCTTGTTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGRPAHF*LCLLEK
Trigger: CTTTTCTAACAAGCACAGTCAGAAATGCGCAGGCCT...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAACCTTTCATCAGGTCTTaGGAAGGCATGACATTCTTA +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQPFIRS*EGMTFL
Trigger: TAAGAATGTCATGCCTTCTCAAGACCTGATGAAAGG...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATCTCAGGTTGGAAGGGTaGCAAATTAGACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYLRLEG*QIRPGT
Trigger: TGTTCCTGGTCTAATTTGGCACCCTTCCAACCTGAG...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACATGCACCGAGACACCATaGAATCACCAACAGCTACTG +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTCTETP*NHQQLL
Trigger: CAGTAGCTGTTGGTGATTGCATGGTGTCTCGGTGCA...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGGAGCTCAGAAGACCTTaGCTTTCCCCATGCACCGAG +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPELRRP*LSPCTE
Trigger: CTCGGTGCATGGGGAAAGGCAAGGTCTTCTGAGCTC...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAATAAAACAGGACAAATaGCCCAGAATTCCATTAAAG +
Preference number: 4 (lower is better)
Translates to: THQGGARMPGIHLDVYRRIKQDK*PRIPLK
Trigger: CTTTAATGGAATTCTGGGGCATTTGTCCTGTTTTAT...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATGGAAAGCTCCTCAGTTaGTCTGAGGATGCTGTACAA +
Preference number: 4 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYGKLLS*SEDAVQ
Trigger: TTGTACAGCATCCTCAGACCAACTGAGGAGCTTTCC...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGAGTCAAGCACCACCATaGGCATGGGCACAGGGACTA +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPSQAPP*AWAQGL
Trigger: TAGTCCCTGTGCCCATGCCCATGGTGGTGCTTGACT...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATCTGAATGAGGGTAACTaGGATTTCCTTCACCTCGCT +
Preference number: 4 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYLNEGN*DFLHLA
Trigger: AGCGAGGTGAAGGAAATCCCAGTTACCCTCATTCAG...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTCCCCTATTGTTGGGTTaGTGTTTGGATCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPPLLLG*CLDQNC
Trigger: ACAGTTTTGATCCAAACATCAACCCAACAATAGGGG...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTTTGGCTGATAGGCCTTaGTACTTGAATTCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPLADRP*YLNSCS
Trigger: TGAGCAAGAATTCAAGTATCAAGGCCTATCAGCCAA...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAACTTGGTCATAAAAGATaGCCCTATTGTTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQLGHKR*PYCWVD
Trigger: ATCAACCCAACAATAGGGGCATCTTTTATGACCAAG...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATACCCAGGAGACAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNTQETG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTGTCTCCTGGGT...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATCCCCAACCCCAGGCCTaGGCATTTCTGACTGTGCTT +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNPQPQA*AFLTVL
Trigger: AAGCACAGTCAGAAATGCGCAGGCCTGGGGTTGGGG...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAACGGTAAGCGAGCGCTaGTATTCTCTTTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTTVSER*YSLSEA
Trigger: TGCTTCAGAAAGAGAATAGCAGCGCTCGCTTACCGT...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATGCTGTCTTCGGAGTTTaGAGCCCTTACCGCCAGATG +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNAVFGV*SPYRQM
Trigger: CATCTGGCGGTAAGGGCTTCAAACTCCGAAGACAGC...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATTCAAGACTGGCTAGGTaGAAACTGGTGGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNSRLAR*KLVAGT
Trigger: GGTCCCTGCCACCAGTTTTCACCTAGCCAGTCTTGA...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAACATATGTCTTTATTATaGTTTCCAGATGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQHMSLL*FPDGIW
Trigger: CCAGATCCCATCTGGAAATCATAATAAAGACATATG...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCTTTCCCTGCTTTCACTaGGTATGGATTATGGATCTG +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGFPCFH*VWIMDL
Trigger: CAGATCCATAATCCATACTCAGTGAAAGCAGGGAAA...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCAGCTTCCCCAAACAATaGAAAGTTCCTGAATCAAGC +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGSFPKQ*KVPESS
Trigger: GCTTGATTCAGGAACTTTTCATTGTTTGGGGAAGCT...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGTGCCTATGATATTTTaGTACCTGTATCGAATGTGT +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQVPMIF*YLYRMC
Trigger: ACACATTCGATACAGGTATCAAAATATCATAGGCAC...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAAATTCAGCGAAGTTCTaGCCACTTATGTTAACTATC +
Preference number: 4 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQNSAKF*PLMLTI
Trigger: GATAGTTAACATAAGTGGTCAGAACTTCGCTGAATT...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACACAGACATCCAGAAAGTaGGTACACAATGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTQTSRK*VHNGKQ
Trigger: CTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTG...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTCCACATTATGTCCAATaGAACTTCATCACAATAGGC +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPPHYVQ*NFITIG
Trigger: GCCTATTGTGATGAAGTTGCATTGGACATAATGTGG...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATTTTCCTCCACAGTACTaGATTCAAAAGCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYFPPQY*IQKLPQ
Trigger: TTGGGGAAGCTTTTGAATGCAGTACTGTGGAGGAAA...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGCCAGGCCATGTGTCATaGAGTAAGTCCAAGGCCATA +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPPGHVS*SKSKAI
Trigger: TATGGCCTTGGACTTACTGCATGACACATGGCCTGG...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATCCCACTCTACTTGGGTaGCCAGTGGCCTCTGAATTG +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNPTLLG*PVASEL
Trigger: CAATTCAGAGGCCACTGGCCACCCAAGTAGAGTGGG...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CAA 72 bp TTGTGTGAGAGTTCTGGAGACCATTGGTTTCTAGGATaGGACGCCTGCAAAGAGCTTATTTCAATTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LCESSGDHWFLG*DACKELISISP
Trigger: CGGAGAAATTGAAATAAGCTCTTTGCAGGCGTCCAATCCTAGAAACCAATGGTCTCCAGAACTCTCACACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTATGTCTCAATTCCTTTaGAATATAGCCTCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPMSQFL*NIASSP
Trigger: TGGAGAAGAGGCTATATTTCAAAGGAATTGAGACAT...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGCGGCTGACAGGCAGGTaGTGGACACTTAATCATAAT +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPRLTGR*WTLNHN
Trigger: ATTATGATTAAGTGTCCATCACCTGCCTGTCAGCCG...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGAGAGGAGAGCCAGCCTaGGTTTGTCATTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPRGEPA*VCHFPN
Trigger: ATTTGGGAAATGACAAACTCAGGCTGGCTCTCCTCT...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGCTGCTATTCTCTTTCTaGAGCAGCGGAGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPLLFSF*SSGVLH
Trigger: GTGAAGAACTCCGCTGCTTCAGAAAGAGAATAGCAG...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCGGTCTCTACAAAAATTaGATGAATAGAGTCGGCGTA +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGGLYKN*MNRVGV
Trigger: TACGCCGACTCTATTCATGCAATTTTTGTAGAGACC...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACATCTGTGAATCCTTTTTaGACGGAGAAGACTCAAGAC +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTSVNPF*TEKTQD
Trigger: GTCTTGAGTCTTCTCCGTGCAAAAAGGATTCACAGA...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGGGGTCGCACATGCTTTaGCTCTTTGGTAATGAGTCA +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPGSHML*LFGNES
Trigger: TGACTCATTACCAAAGAGGCAAAGCATGTGCGACCC...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACATTACACGAGAAACAGTaGCGAGTCAAGTTCTTAGAC +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTLHEKQ*RVKFLD
Trigger: GTCTAAGAACTTGACTCGGCACTGTTTCTCGTGTAA...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATCTAGGATTGGACGCCTaGAAAGAGCTTATTTCAATT +
Preference number: 4 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYLGLDA*KELISI
Trigger: AATTGAAATAAGCTCTTTGCAGGCGTCCAATCCTAG...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTAAGTCCTTCGAGATCTaGAAGGTAAATCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPKSFEI*KVNHFP
Trigger: AGGAAAATGATTTACCTTCCAGATCTCGAAGGACTT...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAACACAGCGTAACGAATaGTTTAAAAATAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTTQRNE*FKNRAT
Trigger: GGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGT...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATTTGGTGGCACACACATaGCAAGGTCAGAAGCAAACC +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNLVAHT*QGQKQT
Trigger: GGTTTGCTTCTGACCTTGTCATGTGTGTGCCACCAA...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAATGCTAAGAGAATCCTaGAAGACCAACAGAGATAGA +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTMLRES*KTNRDR
Trigger: TCTATCTCTGTTGGTCTTTCAGGATTCTCTTAGCAT...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGATACGCAAGACTGGGTaGGAGATTCAATGGAATGTC +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPIRKTG*EIQWNV
Trigger: GACATTCCATTGAATCTCGCACCCAGTCTTGCGTAT...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCTATACAATACCAATGTaGTTGAGTCTCCCGTTAAGA +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGYTIPM*LSLPLR
Trigger: TCTTAACGGGAGACTCAAGCACATTGGTATTGTATA...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGACTTACACAGGTTCCTaGAGAGACACGTGGATGTTT +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPTYTGS*RDTWMF
Trigger: AAACATCCACGTGTCTCTGCAGGAACCTGTGTAAGT...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCATTAAACCTGATCTATaGTATTGGAAGTCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGIKPDL*YWKSFE
Trigger: CTCGAAGGACTTCCAATAGCATAGATCAGGTTTAAT...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGCTAGAGGAAGAGGTATaGCCAGCTCTTCTACAAGAT +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPLEEEV*PALLQD
Trigger: ATCTTGTAGAAGAGCTGGGCATACCTCTTCCTCTAG...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAAGATGCCCCTATTGTTaGGTTGATGTTTGGATCAAA +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTRCPYC*VDVWIK
Trigger: TTTGATCCAAACATCAACCCAACAATAGGGGCATCT...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATGCTGAGGGGTTTCCTTaGCAATTTCAATTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNAEGFP*QFQFWP
Trigger: GGGCCAAAATTGAAATTGTCAAGGAAACCCCTCAGC...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGAAAGTGCGTACACAATaGGAAACAGGGACTTCAAAC +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPKVRTQ*ETGTSN
Trigger: GTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTT...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATACCCATTTTGTTAACTaGCCGTGTTCCCACGGTAAG +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNTHFVN*PCSHGK
Trigger: CTTACCGTGGGAACACGGCCAGTTAACAAAATGGGT...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATATATGGGAGGGAGGGTaGGAAATCATGAAATCAGCA +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNIWEGG*EIMKSA
Trigger: TGCTGATTTCATGATTTCTCACCCTCCCTCCCATAT...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATATACAGTTAACAGCTTaGCCCCTGAAGGTACATTCC +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNIQLTA*PLKVHS
Trigger: GGAATGTACCTTCAGGGGTCAAGCTGTTAACTGTAT...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAAAACAAAGTCAGTGCTaGCTTCAAAATTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTKQSQC*LQNFSG
Trigger: TCCTGAAAAATTTTGAAGCCAGCACTGACTTTGTTT...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR TCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATGAATGTGTAATGGACTaGATGAGGGTAACTGGGATT +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNECVMD*MRVTGI
Trigger: AATCCCAGTTACCCTCATTCAGTCCATTACACATTC...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGTCTATCCATATTAAGTaGGGGGCACAAAATAATACC +
Preference number: 4 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPSIHIK*GAQNNT
Trigger: GGTATTATTTTGTGCCCCCCACTTAATATGGATAGA...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATCATTTTGTGGAGTACTaGGCACCATACAGATCTAAA +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNHFVEY*APYRSK
Trigger: TTTAGATCTGTATGGTGCCCAGTACTCCACAAAATG...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CAA 72 bp AAATCTTGTAAATTTCCTTCCCCTACAATACTCAGGTaGGAAGGGTGCCAAATTAGACCAGGAACAAATTTT +
Preference number: 4 (lower is better)
Translates to: KSCKFPSPTILR*EGCQIRPGTNF
Trigger: AAAATTTGTTCCTGGTCTAATTTGGCACCCTTCCAACCTGAGTATTGTAGGGGAAGGAAATTTACAAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATCTGAAATATCATTGCTaGAGTCTTTGGAGAACAGAA +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNLKYHC*SLWRTE
Trigger: TTCTGTTCTCCAAAGACTGCAGCAATGATATTTCAG...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR GCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATCTAACTGTATTTCTGTaGCCACTAATCAACTTCTGT +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNLTVFL*PLINFC
Trigger: ACAGAAGTTGATTAGTGGGCACAGAAATACAGTTAG...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CCA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATAGCTCATTTTGGTACTaGACAGTCTTGGTCATAAAA +
Preference number: 4 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNSSFWY*TVLVIK
Trigger: TTTTATGACCAAGACTGTCCAGTACCAAAATGAGCT...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
3UTR CAA 72 bp TTTTCAGCAAGGTCAAAAGCCAACGATGTAGTCCCTTaGTACACTAGAGATTCTTTACATAATAGAAGTTCA +
Preference number: 4 (lower is better)
Translates to: FSARSKANDVVP*YTRDSLHNRSS
Trigger: TGAACTTCTATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCTTGCTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS GCA 90 bp CTCACGCCCAGCAACAACTGGCTGGAGTGTGTGCTCATCAGGTGGTaGTCCTCTCCTGTCTTCTCCATGCAGGGCATCCTGGTCAGCACC +
Preference number: 5 (lower is better)
Translates to: LTPSNNWLECVLIRW*SSPVFSMQGILVST
Trigger: GGTGCTGACCAGGATGCCCTGCATGGAGAAGACAGGAGAGGAGCACCACCTGATGAGCACACACTCCAGCCAGTTGTTGCTGGGCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS GCA 90 bp ACCCTGGACATGTGCTCACGCCCAGCAACAACTGGCTGGAGTGTGTaGTCATCAGGTGGTGCTCCTCTCCTGTCTTCTCCATGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: TLDMCSRPATTGWSV*SSGGAPLLSSPCRA
Trigger: TGCCCTGCATGGAGAAGACAGGAGAGGAGCACCACCTGATGAGCACACACTCCAGCCAGTTGTTGCTGGGCGTGAGCACATGTCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CCA 90 bp CTGCGCTTTGGCAACCCTGGACATGTGCTCACGCCCAGCAACAACTaGCTGGAGTGTGTGCTCATCAGGTGGTGCTCCTCTCCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: LRFGNPGHVLTPSNN*LECVLIRWCSSPVF
Trigger: GAAGACAGGAGAGGAGCACCACCTGATGAGCACACACTCCAGCCAGTTGTTGCTGGGCGTGAGCACATGTCCAGGGTTGCCAAAGCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CCA 90 bp GCTGTCAGGTGTGTGGCTTTCCTCAGCACTGCGCTTTGGCAACCCTaGACATGTGCTCACGCCCAGCAACAACTGGCTGGAGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: AVRCVAFLSTALWQP*TCAHAQQQLAGVCA
Trigger: AGCACACACTCCAGCCAGTTGTTGCTGGGCGTGAGCACATGTCCAGGGTTGCCAAAGCGCAGTGCTGAGGAAAGCCACACACCTGACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS GCA 90 bp GTGTGTGGCTTTCCTCAGCACTGCGCTTTGGCAACCCTGGACATGTaGTCACGCCCAGCAACAACTGGCTGGAGTGTGTGCTCATCAGGT +
Preference number: 5 (lower is better)
Translates to: VCGFPQHCALATLDM*SRPATTGWSVCSSG
Trigger: ACCTGATGAGCACACACTCCAGCCAGTTGTTGCTGGGCGTGAGCACATGTCCAGGGTTGCCAAAGCGCAGTGCTGAGGAAAGCCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CCA 90 bp TTGTGGGTAGCTGTCAGGTGTGTGGCTTTCCTCAGCACTGCGCTTTaGCAACCCTGGACATGTGCTCACGCCCAGCAACAACTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: LWVAVRCVAFLSTAL*QPWTCAHAQQQLAG
Trigger: TCCAGCCAGTTGTTGCTGGGCGTGAGCACATGTCCAGGGTTGCCAAAGCGCAGTGCTGAGGAAAGCCACACACCTGACAGCTACCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS-3UTR CAA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGACCGAGCAGACACACTTaGAGCTCCCTCAGCGCCATG +
Preference number: 5 (lower is better)
Translates to: THQGGARMPGIHLDVYRRPSRHT*SSLSAM
Trigger: CATGGCGCTGAGGGAGCTCAAAGTGTGTCTGCTCGG...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATCGCCGCCGCCCTAAGTaGAGAAGGGAGAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYRRRPK*RRERPG
Trigger: GCCTGGCCTCTCCCTTCTCAACTTAGGGCGGCGGCG...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS TCA 90 bp ATCTCCTGTGCAGCTCTGGGCTGTGTGATGGTGCATCAGGCAGGCTaGAGGCAGGTTTGCATCTCAGAGCAACTACTCTCGTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: ISCAALGCVMVHQAG*RQVCISEQLLSFLS
Trigger: GGACAAGAACGAGAGTAGTTGCTCTGAGATGCAAACCTGCCTTCAGCCTGCCTGATGCACCATCACACAGCCCAGAGCTGCACAGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS GCA 90 bp GTGAAAATAGAGCCTGGCTGTGGATGGCACATTCTGGACCTTCAATaGACTGCCCAGGATAAACGGGCAGTCCCTGACCCAGACAGGCTT +
Preference number: 5 (lower is better)
Translates to: VKIEPGCGWHILDLQ*TAQDKRAVPDPDRL
Trigger: AAGCCTGTCTGGGTCAGGGACTGCCCGTTTATCCTGGGCAGTGCATTGAAGGTCCAGAATGTGCCATCCACAGCCAGGCTCTATTTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS GCA 90 bp AAACAATTTGTGGGTAGCTGTCAGGTGTGTGGCTTTCCTCAGCACTaGGCTTTGGCAACCCTGGACATGTGCTCACGCCCAGCAACAACT +
Preference number: 5 (lower is better)
Translates to: KQFVGSCQVCGFPQH*ALATLDMCSRPATT
Trigger: AGTTGTTGCTGGGCGTGAGCACATGTCCAGGGTTGCCAAAGCGCAGTGCTGAGGAAAGCCACACACCTGACAGCTACCCACAAATTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS-3UTR CAA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAGAGTTCTGGAGACCATaGGTTTCTAGGATTGGACGC +
Preference number: 5 (lower is better)
Translates to: THQGGARMPGIHLDVYRREFWRP*VSRIGR
Trigger: GCGTCCAATCCTAGAAACCAATGGTCTCCAGAACTC...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTCCGCCAGATGGCAGGTaGGCGTCAGTGGATGGAATT +
Preference number: 5 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPPPDGR*ASVDGI
Trigger: AATTCCATCCACTGACGCCAACCTGCCATCTGGCGG...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCTCATTGCTGCAGTCTTaGGAGAACAGAACTGGTCCA +
Preference number: 5 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSSLLQS*ENRTGP
Trigger: TGGACCAGTTCTGTTCTCCAAAGACTGCAGCAATGA...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAAAAAATCGTTACTGGTaGGGCGCGGTGGCTCACGTC +
Preference number: 5 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQKNRYW*GAVAHV
Trigger: GACGTGAGCCACCGCGCCCAACCAGTAACGATTTTT...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS TCA 90 bp GGGATGGCAGGAAAGCCCCCTTTAGGTGACATTGGAGGTTGGTTCTaGAGGCTGAATAGAGTTGTGGAAGGGCATGAGGGTGTGAAACTA +
Preference number: 5 (lower is better)
Translates to: GMAGKPPLGDIGGWF*RLNRVVEGHEGVKL
Trigger: TAGTTTCACACCCTCATGCCCTTCCACAACTCTATTCAGCCTTCAGAACCAACCTCCAATGTCACCTAAAGGGGGCTTTCCTGCCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS-3UTR CAA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAGCCCCTATTGTTGGGTaGATGTTTGGATCAAAACTG +
Preference number: 5 (lower is better)
Translates to: THQGGARMPGIHLDVYRRAPIVG*MFGSKL
Trigger: CAGTTTTGATCCAAACATCAACCCAACAATAGGGGC...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCAGAGCCAGCCTGAGTTaGTCATTTCCCAAATGTTCT +
Preference number: 5 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSRASLS*SFPKCS
Trigger: AGAACATTTGGGAAATGACAAACTCAGGCTGGCTCT...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS CCA 90 bp ACAAGACGTGTCTTGTGTGATCCTCCCAGCATTTCAAACAATTTGTaGGTAGCTGTCAGGTGTGTGGCTTTCCTCAGCACTGCGCTTTGG +
Preference number: 5 (lower is better)
Translates to: TRRVLCDPPSISNNL*VAVRCVAFLSTALW
Trigger: CCAAAGCGCAGTGCTGAGGAAAGCCACACACCTGACAGCTACCCACAAATTGTTTGAAATGCTGGGAGGATCACACAAGACACGTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS-3UTR CAA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAAGCAGCAGCTCCGCTTaGGCTCTGAAGGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTSSSSA*ALKAVF
Trigger: GAAGACAGCCTTCAGAGCCAAAGCGGAGCTGCTGCT...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCGAATCAGAAAAACACTaGTGTGAGAGTTCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSESEKH*CESSGD
Trigger: GTCTCCAGAACTCTCACACAAGTGTTTTTCTGATTC...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCTATACAGTTAACAGCTaGACCCCTGAAGGTACATTC +
Preference number: 5 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSYTVNS*TPEGTF
Trigger: GAATGTACCTTCAGGGGTCAAGCTGTTAACTGTATA...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAATGGTACTGGACAGTCTaGGTCATAAAAGATGCCCCT +
Preference number: 5 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQWYWTV*VIKDAP
Trigger: AGGGGCATCTTTTATGACCAAGACTGTCCAGTACCA...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAGGCTGTCTTCGGAGTTaGAAGCCCTTACCGCCAGAT +
Preference number: 5 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTGCLRS*KPLPPD
Trigger: ATCTGGCGGTAAGGGCTTCAAACTCCGAAGACAGCC...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAGTAAATGACTTGAGGTaGGAGCTTAATCTTTTACCC +
Preference number: 5 (lower is better)
Translates to: THQGGARMPGIHLDVYRRVNDLR*ELNLLP
Trigger: GGGTAAAAGATTAAGCTCCAACCTCAAGTCATTTAC...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATTGGGCCCCACTCTACTaGGGTGGCCAGTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNWAPLY*GGQWPL
Trigger: CAGAGGCCACTGGCCACCCAAGTAGAGTGGGGCCCA...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAACATGCTTTGCCTCTTaGGTAATGAGTCAAGCAACC +
Preference number: 5 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQTCFAS*VMSQAT
Trigger: GGTTGCTTGACTCATTACCAAAGAGGCAAAGCATGT...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp ACACACCAGGGTGGTGCCCGGATGCCTGGGATCCATCTGGATGTATACAGAAGAGTGAAGGTCATAGATTaGCACCATCTTTTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: THQGGARMPGIHLDVYRRVKVID*HHLLVK
Trigger: TTTTACCAAAAGATGGTGCAAATCTATGACCTTCAC...TCTTCTGTATACATCCAGATGGATCCCAGGCATCCGGGCACCACCCTGGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGAAGGACACCAGCCCACATAGAGGAGGCGCTCAAGCCTCTCACACAAAAGTCCGGTTCACTATCTAGTTaGTCACTGAACTTTCATTAC +
Preference number: 5 (lower is better)
Translates to: RRTPAHIEEALKPLTQKSGSLSS*SLNFHY
Trigger: GTAATGAAAGTTCAGTGACAAACTAGATAGTGAACC...GGACTTTTGTGTGAGAGGCTTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATACCCTCGATAGTACATaGGTGCTAAGGCACGAAATC +
Preference number: 5 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYTLDST*VLRHEI
Trigger: GATTTCGTGCCTTAGCACCAATGTACTATCGAGGGT...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp CTCTTTCTGAAGCAGCGGAGTTCTTCACCTAACACTGGCCTCTGTGTTTCTTATCATTGGTTTCTAGGATaGGACGCCTGCAAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: LFLKQRSSSPNTGLCVSYHWFLG*DACKEL
Trigger: AAGCTCTTTGCAGGCGTCCAATCCTAGAAACCAATG...ATAAGAAACACAGAGGCCAGTGTTAGGTGAAGAACTCCGCTGCTTCAGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTTTCTGTGAATCCTTTTaGCACGGAGAAGACTCAAGA +
Preference number: 5 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPFCESF*HGEDSR
Trigger: TCTTGAGTCTTCTCCGTGCAAAAAGGATTCACAGAA...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGAGGAATTGACAACTTCAAGAAGGACACCAGCCCACATAGAGGAGGCGCTCAATTGACAATTTCAATTTaGGCCCTATGTGTGAAATGC +
Preference number: 5 (lower is better)
Translates to: RGIDNFKKDTSPHRGGAQLTISI*ALCVKC
Trigger: GCATTTCACACATAGGGCCAAAATTGAAATTGTCAA...TTGAGCGCCTCCTCTATGTGGGCTGGTGTCCTTCTTGAAGTTGTCAATTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp TTCCAGACATCCAGAAAGTGCGTACACAATGGGAAACAGGGACTTCAAACAACAAAACCAAAACCCATTTaGTTAACTGGCCGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: FQTSRKCVHNGKQGLQTTKPKPI*LTGRVP
Trigger: GGGAACACGGCCAGTTAACAAAATGGGTTTTGGTTT...TGTTGTTTGAAGTCCCTGTTTCCCATTGTGTACGCACTTTCTGGATGTCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCTCCTTTCATCAGGTCTaGAGAAGGCATGACATTCTT +
Preference number: 5 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGSFHQV*RRHDIL
Trigger: AAGAATGTCATGCCTTCTCAAGACCTGATGAAAGGA...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp CTCTGTCTACACAGCGTAACGAATGGTTTAAAAATAGGGCCACCACTCACGCCTAACGATGTAGTCCCTTaGTACACTAGAGATTCTTTA +
Preference number: 5 (lower is better)
Translates to: LCLHSVTNGLKIGPPLTPNDVVP*YTRDSL
Trigger: TAAAGAATCTCTAGTGTACAAAGGGACTACATCGTT...AGGCGTGAGTGGTGGCCCTATTTTTAAACCATTCGTTACGCTGTGTAGACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGACAATACCAATGTGCTaGAGTCTCCCGTTAAGAGGC +
Preference number: 5 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPTIPMC*SLPLRG
Trigger: GCCTCTTAACGGGAGACTCAAGCACATTGGTATTGT...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp GAAACAGTGCCGAGTCAAGTTCTTAGACAGACTGATGAAAATGAGGGAAGAGGCGGTGCCTATGATATTTaGATACCTGTATCGAATGTG +
Preference number: 5 (lower is better)
Translates to: ETVPSQVLRQTDENEGRGGAYDI*IPVSNV
Trigger: CACATTCGATACAGGTATCAAAATATCATAGGCACC...GCCTCTTCCCTCATTTTCATCAGTCTGTCTAAGAACTTGACTCGGCACTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS GCA 90 bp TCTCTCCATGACTTCTCTTACATCGATAAGATCACATTTATTTCCTaGAATGGCAACTACAATATTAGGTGGGCCATGCTGTCGAAGCTC +
Preference number: 5 (lower is better)
Translates to: SLHDFSYIDKITFIS*NGNYNIRWAMLSKL
Trigger: GAGCTTCGACAGCATGGCCCACCTAATATTGTAGTTGCCATTGCAGGAAATAAATGTGATCTTATCGATGTAAGAGAAGTCATGGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGGAAAAACTCTTGAAGTaGAACGGTAAAACTGTCCCT +
Preference number: 5 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPEKLLK*NGKTVP
Trigger: AGGGACAGTTTTACCGTTCAACTTCAAGAGTTTTTC...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS GCA 90 bp TCACATTTATTTCCTGCAATGGCAACTACAATATTAGGTGGGCCATaGTGTCGAAGCTCTTTCACCCAATTCTTTAATGTTGAAAATGTC +
Preference number: 5 (lower is better)
Translates to: SHLFPAMATTILGGP*CRSSFTQFFNVENV
Trigger: GACATTTTCAACATTAAAGAATTGGGTGAAAGAGCTTCGACAGCATGGCCCACCTAATATTGTAGTTGCCATTGCAGGAAATAAATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATGACCAGGTAAATGACTaGAGGTTGGAGCTTAATCTT +
Preference number: 5 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNDQVND*RLELNL
Trigger: AAGATTAAGCTCCAACCTCAAGTCATTTACCTGGTC...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp TGTAAGCTAAGTGCTCTATACCTTTATACAATACCAATGTGCTTGAGTCTCCCGGAGGTAGAAAAACTCTaGAAGTTGAACGGTAAAACT +
Preference number: 5 (lower is better)
Translates to: CKLSALYLYTIPMCLSLPEVEKL*KLNGKT
Trigger: AGTTTTACCGTTCAACTTCAAGAGTTTTTCTACCTC...CGGGAGACTCAAGCACATTGGTATTGTATAAAGGTATAGAGCACTTAGCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS-3UTR CAA 90 bp AGGTCAAAAGCCAACGATGTAGTCCCTTTGTACACTAGAGATTCTTTACATAATTGTTTATCGCGTTTTTaGCGCTGGTCTCTACAAAAA +
Preference number: 5 (lower is better)
Translates to: RSKANDVVPLYTRDSLHNCLSRF*RWSLQK
Trigger: TTTTTGTAGAGACCAGCGCAAAAAACGCGATAAACA...ATTATGTAAAGAATCTCTAGTGTACAAAGGGACTACATCGTTGGCTTTTGACCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS TCA 72 bp ATTTACCTACACCTGTATCCCCGAGCAGACACACTTTaGGCTCCCTCAGCGCCATGGCCCGGGAGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: IYLHLYPRADTL*APSAPWPGSQG
Trigger: CCCCTGGCTCCCGGGCCATGGCGCTGAGGGAGCTCAAAGTGTGTCTGCTCGGGGATACAGGTGTAGGTAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244040.4
ENST00000488949.1
CDS TCA 72 bp GCTGAGGTTCGGTCAGCAGCAGCTCCGCTTTGGCTCTaGAGGCTGTCTTCGGAGTTTGAAGCCCTTACCGCC +
Preference number: 6 (lower is better)
Translates to: AEVRSAAAPLWL*RLSSEFEALTA
Trigger: GGCGGTAAGGGCTTCAAACTCCGAAGACAGCCTTCAGAGCCAAAGCGGAGCTGCTGCTGACCGAACCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS GCA 72 bp GTGGGTAGCTGTCAGGTGTGTGGCTTTCCTCAGCACTaGGCTTTGGCAACCCTGGACATGTGCTCACGCCCA +
Preference number: 6 (lower is better)
Translates to: VGSCQVCGFPQH*ALATLDMCSRP
Trigger: TGGGCGTGAGCACATGTCCAGGGTTGCCAAAGCGCAGTGCTGAGGAAAGCCACACACCTGACAGCTACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CCA 72 bp GGCAACCCTGGACATGTGCTCACGCCCAGCAACAACTaGCTGGAGTGTGTGCTCATCAGGTGGTGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GNPGHVLTPSNN*LECVLIRWCSS
Trigger: AGAGGAGCACCACCTGATGAGCACACACTCCAGCCAGTTGTTGCTGGGCGTGAGCACATGTCCAGGGTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CAA 90 bp GGTCAGCAGCAGCTCCGCTTTGGCTCTGAAGGCTGTCTTCGGAGTTaGAAGCCCTTACCGCCAGATGGCAGGTTGGCGTCAGTGGATGGA +
Preference number: 6 (lower is better)
Translates to: GQQQLRFGSEGCLRS*KPLPPDGRLASVDG
Trigger: TCCATCCACTGACGCCAACCTGCCATCTGGCGGTAAGGGCTTCAAACTCCGAAGACAGCCTTCAGAGCCAAAGCGGAGCTGCTGCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS TCA 72 bp AGCTCCGCTTTGGCTCTGAAGGCTGTCTTCGGAGTTTaGAGCCCTTACCGCCAGATGGCAGGTTGGCGTCAG +
Preference number: 6 (lower is better)
Translates to: SSALALKAVFGV*SPYRQMAGWRQ
Trigger: CTGACGCCAACCTGCCATCTGGCGGTAAGGGCTTCAAACTCCGAAGACAGCCTTCAGAGCCAAAGCGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS GCA 72 bp TTTCCTCAGCACTGCGCTTTGGCAACCCTGGACATGTaGTCACGCCCAGCAACAACTGGCTGGAGTGTGTGC +
Preference number: 6 (lower is better)
Translates to: FPQHCALATLDM*SRPATTGWSVC
Trigger: GCACACACTCCAGCCAGTTGTTGCTGGGCGTGAGCACATGTCCAGGGTTGCCAAAGCGCAGTGCTGAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS GCA 72 bp GAGCCTGGCTGTGGATGGCACATTCTGGACCTTCAATaGACTGCCCAGGATAAACGGGCAGTCCCTGACCCA +
Preference number: 6 (lower is better)
Translates to: EPGCGWHILDLQ*TAQDKRAVPDP
Trigger: TGGGTCAGGGACTGCCCGTTTATCCTGGGCAGTGCATTGAAGGTCCAGAATGTGCCATCCACAGCCAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CCA 72 bp TGTGTGGCTTTCCTCAGCACTGCGCTTTGGCAACCCTaGACATGTGCTCACGCCCAGCAACAACTGGCTGGA +
Preference number: 6 (lower is better)
Translates to: CVAFLSTALWQP*TCAHAQQQLAG
Trigger: TCCAGCCAGTTGTTGCTGGGCGTGAGCACATGTCCAGGGTTGCCAAAGCGCAGTGCTGAGGAAAGCCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CCA 72 bp GCTGTCAGGTGTGTGGCTTTCCTCAGCACTGCGCTTTaGCAACCCTGGACATGTGCTCACGCCCAGCAACAA +
Preference number: 6 (lower is better)
Translates to: AVRCVAFLSTAL*QPWTCAHAQQQ
Trigger: TTGTTGCTGGGCGTGAGCACATGTCCAGGGTTGCCAAAGCGCAGTGCTGAGGAAAGCCACACACCTGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CAA 72 bp CAGCTCCGCTTTGGCTCTGAAGGCTGTCTTCGGAGTTaGAAGCCCTTACCGCCAGATGGCAGGTTGGCGTCA +
Preference number: 6 (lower is better)
Translates to: QLRFGSEGCLRS*KPLPPDGRLAS
Trigger: TGACGCCAACCTGCCATCTGGCGGTAAGGGCTTCAAACTCCGAAGACAGCCTTCAGAGCCAAAGCGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS GCA 72 bp AGCAACAACTGGCTGGAGTGTGTGCTCATCAGGTGGTaGTCCTCTCCTGTCTTCTCCATGCAGGGCATCCTG +
Preference number: 6 (lower is better)
Translates to: SNNWLECVLIRW*SSPVFSMQGIL
Trigger: CAGGATGCCCTGCATGGAGAAGACAGGAGAGGAGCACCACCTGATGAGCACACACTCCAGCCAGTTGTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS GCA 72 bp ATGTGCTCACGCCCAGCAACAACTGGCTGGAGTGTGTaGTCATCAGGTGGTGCTCCTCTCCTGTCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: MCSRPATTGWSV*SSGGAPLLSSP
Trigger: TGGAGAAGACAGGAGAGGAGCACCACCTGATGAGCACACACTCCAGCCAGTTGTTGCTGGGCGTGAGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS TCA 72 bp TCAGGACCACCTACTTCATCATCAAGTCTGAGAGGCTaGGGTTCGGTCAGCAGCAGCTCCGCTTTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: SGPPTSSSSLRG*GSVSSSSALAL
Trigger: CAGAGCCAAAGCGGAGCTGCTGCTGACCGAACCTCAGCCTCTCAGACTTGATGATGAAGTAGGTGGTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS CCA 72 bp GATATGGGTCTAGAGCAACACGGCAGTGTGGCGATGTaGTTACTTGTCCGAGAGCAGGGATGGCAGGAAAGC +
Preference number: 6 (lower is better)
Translates to: DMGLEQHGSVAM*LLVREQGWQES
Trigger: GCTTTCCTGCCATCCCTGCTCTCGGACAAGTAACCACATCGCCACACTGCCGTGTTGCTCTAGACCCATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CAA 90 bp AGCTCTGGGCTGTGTGATGGTGCATCAGGCAGGCTGAAGGCAGGTTaGCATCTCAGAGCAACTACTCTCGTTCTTGTCCAGCTGTATCCC +
Preference number: 6 (lower is better)
Translates to: SSGLCDGASGRLKAG*HLRATTLVLVQLYP
Trigger: GGGATACAGCTGGACAAGAACGAGAGTAGTTGCTCTGAGATGCAAACCTGCCTTCAGCCTGCCTGATGCACCATCACACAGCCCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CCA 72 bp AGACTGGTGGGAGGAGGTGAAAATAGAGCCTGGCTGTaGATGGCACATTCTGGACCTTCAATGCACTGCCCA +
Preference number: 6 (lower is better)
Translates to: RLVGGGENRAWL*MAHSGPSMHCP
Trigger: TGGGCAGTGCATTGAAGGTCCAGAATGTGCCATCCACAGCCAGGCTCTATTTTCACCTCCTCCCACCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS TCA 72 bp GTTAACTTTCAGGACCACCTACTTCATCATCAAGTCTaGGAGGCTGAGGTTCGGTCAGCAGCAGCTCCGCTT +
Preference number: 6 (lower is better)
Translates to: VNFQDHLLHHQV*EAEVRSAAAPL
Trigger: AAGCGGAGCTGCTGCTGACCGAACCTCAGCCTCTCAGACTTGATGATGAAGTAGGTGGTCCTGAAAGTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS TCA 72 bp GGAAAGCCCCCTTTAGGTGACATTGGAGGTTGGTTCTaGAGGCTGAATAGAGTTGTGGAAGGGCATGAGGGT +
Preference number: 6 (lower is better)
Translates to: GKPPLGDIGGWF*RLNRVVEGHEG
Trigger: ACCCTCATGCCCTTCCACAACTCTATTCAGCCTTCAGAACCAACCTCCAATGTCACCTAAAGGGGGCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CAA 90 bp GATAAACGGGCAGTCCCTGACCCAGACAGGCTTACAAGACGTGTCTaGTGTGATCCTCCCAGCATTTCAAACAATTTGTGGGTAGCTGTC +
Preference number: 6 (lower is better)
Translates to: DKRAVPDPDRLTRRV*CDPPSISNNLWVAV
Trigger: GACAGCTACCCACAAATTGTTTGAAATGCTGGGAGGATCACACAAGACACGTCTTGTAAGCCTGTCTGGGTCAGGGACTGCCCGTTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CAA 72 bp CGTGTCTTGTGTGATCCTCCCAGCATTTCAAACAATTaGTGGGTAGCTGTCAGGTGTGTGGCTTTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: RVLCDPPSISNN*WVAVRCVAFLS
Trigger: GCTGAGGAAAGCCACACACCTGACAGCTACCCACAAATTGTTTGAAATGCTGGGAGGATCACACAAGACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CAA 72 bp GCAGTCCCTGACCCAGACAGGCTTACAAGACGTGTCTaGTGTGATCCTCCCAGCATTTCAAACAATTTGTGG +
Preference number: 6 (lower is better)
Translates to: AVPDPDRLTRRV*CDPPSISNNLW
Trigger: CCACAAATTGTTTGAAATGCTGGGAGGATCACACAAGACACGTCTTGTAAGCCTGTCTGGGTCAGGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CAA 90 bp CTTACAAGACGTGTCTTGTGTGATCCTCCCAGCATTTCAAACAATTaGTGGGTAGCTGTCAGGTGTGTGGCTTTCCTCAGCACTGCGCTT +
Preference number: 6 (lower is better)
Translates to: LTRRVLCDPPSISNN*WVAVRCVAFLSTAL
Trigger: AAGCGCAGTGCTGAGGAAAGCCACACACCTGACAGCTACCCACAAATTGTTTGAAATGCTGGGAGGATCACACAAGACACGTCTTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CCA 72 bp GTCTTGTGTGATCCTCCCAGCATTTCAAACAATTTGTaGGTAGCTGTCAGGTGTGTGGCTTTCCTCAGCACT +
Preference number: 6 (lower is better)
Translates to: VLCDPPSISNNL*VAVRCVAFLST
Trigger: AGTGCTGAGGAAAGCCACACACCTGACAGCTACCCACAAATTGTTTGAAATGCTGGGAGGATCACACAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS CCA 72 bp AATAGAGTTGTGGAAGGGCATGAGGGTGTGAAACTATaGCATGCTGGAGAACAGCACGCAGTTTGTACTAGA +
Preference number: 6 (lower is better)
Translates to: NRVVEGHEGVKL*HAGEQHAVCTR
Trigger: TCTAGTACAAACTGCGTGCTGTTCTCCAGCATGCCATAGTTTCACACCCTCATGCCCTTCCACAACTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488949.1
CDS GCA 72 bp TTTCCTGCAATGGCAACTACAATATTAGGTGGGCCATaGTGTCGAAGCTCTTTCACCCAATTCTTTAATGTT +
Preference number: 6 (lower is better)
Translates to: FPAMATTILGGP*CRSSFTQFFNV
Trigger: AACATTAAAGAATTGGGTGAAAGAGCTTCGACAGCATGGCCCACCTAATATTGTAGTTGCCATTGCAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4
CDS CCA 72 bp ACATTTATTTCCTGCAATGGCAACTACAATATTAGGTaGGCCATGCTGTCGAAGCTCTTTCACCCAATTCTT +
Preference number: 6 (lower is better)
Translates to: TFISCNGNYNIR*AMLSKLFHPIL
Trigger: AAGAATTGGGTGAAAGAGCTTCGACAGCATGGCCCACCTAATATTGTAGTTGCCATTGCAGGAAATAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244040.4