Pregenerated sensors for RAB10 (Homo sapiens)
Ensembl gene IDs: ENSG00000084733Ensembl transcript IDs: ENST00000264710.5, ENST00000462003.5, ENST00000473035.1, ENST00000495146.5
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGGCCACTTAAAACAAGACTCAGCAAACCAAAGCTATCACTTCTaGATTACCCTTTGTCCTCAATTAACTACTTTGAAAATTACAGCC | + |
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Preference number: 1 (lower is better) Translates to: QGHLKQDSANQSYHF*ITLCPQLTTLKITA Trigger: GGCTGTAATTTTCAAAGTAGTTAATTGAGGACAAAGGGTAATGCAGAAGTGATAGCTTTGGTTTGCTGAGTCTTGTTTTAAGTGGCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| 3UTR-3UTR GCA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTGCAAATAAAGCAGCATaGAGGGAGACGCAAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: KQPVLGYQAARGVAKMQTANKAA*RETQGR Trigger: TCTTCCTTGCGTCTCCCTGCATGCTGCTTTATTTGC...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTTCCATTTCATAAACTCAATGGATAGACAGGAAGGGAACAAAGAGAGGAGGAAACGGGGTAGTGGATaGCAACTGATGGAACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LFHFINSMDRQEGNKERRKRGSG*QLMEQE Trigger: CTCCTGTTCCATCAGTTGCCATCCACTACCCCGTTT...CCTCCTCTCTTTGTTCCCTTCCTGTCTATCCATTGAGTTTATGAAATGGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| 3UTR-3UTR TCA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTTGGTTTATGTTTGGATaGTATGTCTCCTGCACATGC | + |
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Preference number: 2 (lower is better) Translates to: KQPVLGYQAARGVAKMQTWFMFG*YVSCTC Trigger: GCATGTGCAGGAGACATATCATCCAAACATAAACCA...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| 3UTR-3UTR TCA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTAAGACACCAATTAACTaGCATTGGATAGTAGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: KQPVLGYQAARGVAKMQTKTPIN*HWIVGS Trigger: ACTGCCTACTATCCAATGTCAGTTAATTGGTGTCTT...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| 3UTR-3UTR GCA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTCAAAGCTATCACTTCTaGATTACCCTTTGTCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: KQPVLGYQAARGVAKMQTQSYHF*ITLCPQ Trigger: TTGAGGACAAAGGGTAATGCAGAAGTGATAGCTTTG...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| 3UTR-3UTR CCA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTTTAATGGTTTATGTTTaGATGATATGTCTCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: KQPVLGYQAARGVAKMQTLMVYV*MICLLH Trigger: GTGCAGGAGACATATCATCCAAACATAAACCATTAA...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| 3UTR TCA 72 bp | GAACTGGACTATAATACAACTGAAATGCAGTTGAGCTaGGCAAGTACATTTAAAAATGAACTCACAGACATG | + |
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Preference number: 3 (lower is better) Translates to: ELDYNTTEMQLS*ASTFKNELTDM Trigger: CATGTCTGTGAGTTCATTTTTAAATGTACTTGCTCAGCTCAACTGCATTTCAGTTGTATTATAGTCCAGTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| 3UTR GCA 72 bp | TTAAAACAAGACTCAGCAAACCAAAGCTATCACTTCTaGATTACCCTTTGTCCTCAATTAACTACTTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LKQDSANQSYHF*ITLCPQLTTLK Trigger: TTTCAAAGTAGTTAATTGAGGACAAAGGGTAATGCAGAAGTGATAGCTTTGGTTTGCTGAGTCTTGTTTTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR GCA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTAGTGGCGGCGTCCAGTaGCTCCGAGGGCGGCGACCG | + |
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Preference number: 4 (lower is better) Translates to: KQPVLGYQAARGVAKMQTSGGVQ*LRGRRP Trigger: CGGTCGCCGCCCTCGGAGGCACTGGACGCCGCCACT...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR TCA 90 bp | CTCTTCCATTTCATAAACTCAATGGATAGACAGGAAGGGAACAAAGAGAGGAGGGAGGCGCAGCGGGCGTaGGGACAGTCTCTCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: LFHFINSMDRQEGNKERREAQRA*GQSLSR Trigger: TCGGGAGAGAGACTGTCCTCACGCCCGCTGCGCCTC...CCTCCTCTCTTTGTTCCCTTCCTGTCTATCCATTGAGTTTATGAAATGGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR GCA 90 bp | CTCTTCCATTTCATAAACTCAATGGATAGACAGGAAGGGAACAAAGAGAGGAGGGCCACCTTTTCCCCGTaGCCTCTCACGCCGGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: LFHFINSMDRQEGNKERRATFSP*PLTPAC Trigger: GCACGCCGGCGTGAGAGGGCACGGGGAAAAGGTGGC...CCTCCTCTCTTTGTTCCCTTCCTGTCTATCCATTGAGTTTATGAAATGGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CCA 90 bp | CTCTTCCATTTCATAAACTCAATGGATAGACAGGAAGGGAACAAAGAGAGGAGGAGGAAGCCCCGACAGTaGCGGCGTCCAGTGCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LFHFINSMDRQEGNKERRRKPRQ*RRPVPP Trigger: CGGAGGCACTGGACGCCGCCACTGTCGGGGCTTCCT...CCTCCTCTCTTTGTTCCCTTCCTGTCTATCCATTGAGTTTATGAAATGGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR GCA 90 bp | AAGAAGTGGCCAAGGAGAAGAAATGGTGGCAGGAATAGTTTTAAATATCAAGGCACGGGCGAGCAAGCCTaGTCTGCCGTCGAGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: KKWPRRRNGGRNSFKYQGTGEQA*SAVEEA Trigger: CGCCTCCTCGACGGCAGAGCAGGCTTGCTCGCCCGT...GCCTTGATATTTAAAACTATTCCTGCCACCATTTCTTCTCCTTGGCCACTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR TCA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTACCTACGAACAGCTTTaGGGAAGCCCCGACAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KQPVLGYQAARGVAKMQTTYEQL*GSPDSG Trigger: GCCACTGTCGGGGCTTCCTCAAAGCTGTTCGTAGGT...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR TCA 90 bp | AAGAAGTGGCCAAGGAGAAGAAATGGTGGCAGGAATAGTTTTAAATATCAAGGCCGATCAGGAGCAGCTTaGAAAGCAGGTCGTACGTCT | + |
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Preference number: 4 (lower is better) Translates to: KKWPRRRNGGRNSFKYQGRSGAA*KAGRTS Trigger: AGACGTACGACCTGCTTTTCAAGCTGCTCCTGATCG...GCCTTGATATTTAAAACTATTCCTGCCACCATTTCTTCTCCTTGGCCACTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR TCA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTTGTCATATACTAGCATaGTACCCATTGCGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: KQPVLGYQAARGVAKMQTCHILA*YPLRLC Trigger: ACAGAGGCGCAATGGGTATCATGCTAGTATATGACA...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR TCA 90 bp | CTCTTCCATTTCATAAACTCAATGGATAGACAGGAAGGGAACAAAGAGAGGAGGGTAGTGGATGGCAACTaGTGGAACAGGAGAATGCTC | + |
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Preference number: 4 (lower is better) Translates to: LFHFINSMDRQEGNKERRVVDGN*WNRRML Trigger: GAGCATTCTCCTGTTCCATCAGTTGCCATCCACTAC...CCTCCTCTCTTTGTTCCCTTCCTGTCTATCCATTGAGTTTATGAAATGGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR GCA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTGATGGAACAGGAGAATaGTCAGCAGCATTTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: KQPVLGYQAARGVAKMQTDGTGE*SAAFAL Trigger: AAGAGCAAATGCTGCTGAGCATTCTCCTGTTCCATC...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CCA 90 bp | GCAAACCACAAACATTTTAATGGTTTATGTTTGGATGATATGTCTCCTGCACATAGGACCGGGGAAGCGTaGGAAAAAGGCTCGAGACGG | + |
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Preference number: 4 (lower is better) Translates to: ANHKHFNGLCLDDMSPAHRTGEA*EKGSRR Trigger: CCGTCTCGAGCCTTTTTCCCACGCTTCCCCGGTCCT...ATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CCA 90 bp | AAGAAGTGGCCAAGGAGAAGAAATGGTGGCAGGAATAGTTTTAAATATCAAGGCAAACGGGGTAGTGGATaGCAACTGATGGAACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KKWPRRRNGGRNSFKYQGKRGSG*QLMEQE Trigger: CTCCTGTTCCATCAGTTGCCATCCACTACCCCGTTT...GCCTTGATATTTAAAACTATTCCTGCCACCATTTCTTCTCCTTGGCCACTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR GCA 90 bp | CTCTTCCATTTCATAAACTCAATGGATAGACAGGAAGGGAACAAAGAGAGGAGGAATACCATGCTCCCTTaGAATCTGTTCTCCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LFHFINSMDRQEGNKERRNTMLP*NLFSFS Trigger: GGAAAAGGAGAACAGATTGCAAGGGAGCATGGTATT...CCTCCTCTCTTTGTTCCCTTCCTGTCTATCCATTGAGTTTATGAAATGGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR TCA 90 bp | GCAAACCACAAACATTTTAATGGTTTATGTTTGGATGATATGTCTCCTGCACATTGTAGTAGGAGGTTGTaGTGGTGTGAAATCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ANHKHFNGLCLDDMSPAHCSRRL*WCEIAP Trigger: AGGAGCGATTTCACACCATCACAACCTCCTACTACA...ATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR GCA 90 bp | AAGAAGTGGCCAAGGAGAAGAAATGGTGGCAGGAATAGTTTTAAATATCAAGGCCAAAGCTATCACTTCTaGATTACCCTTTGTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: KKWPRRRNGGRNSFKYQGQSYHF*ITLCPQ Trigger: TTGAGGACAAAGGGTAATGCAGAAGTGATAGCTTTG...GCCTTGATATTTAAAACTATTCCTGCCACCATTTCTTCTCCTTGGCCACTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR GCA 90 bp | GCAAACCACAAACATTTTAATGGTTTATGTTTGGATGATATGTCTCCTGCACATGCAAATAAAGCAGCATaGAGGGAGACGCAAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: ANHKHFNGLCLDDMSPAHANKAA*RETQGR Trigger: TCTTCCTTGCGTCTCCCTGCATGCTGCTTTATTTGC...ATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CCA 90 bp | CTCTTCCATTTCATAAACTCAATGGATAGACAGGAAGGGAACAAAGAGAGGAGGTTTCCACATCTTCATTaGCATGCTCATCTATGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LFHFINSMDRQEGNKERRFPHLH*HAHLCF Trigger: GAAACATAGATGAGCATGCCAATGAAGATGTGGAAA...CCTCCTCTCTTTGTTCCCTTCCTGTCTATCCATTGAGTTTATGAAATGGAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| 3UTR CAA 72 bp | AGCCAAGCAAACCACAAACATTTTAATGGTTTATGTTaGGATGATATGTCTCCTGCACATGCTTCCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: SQANHKHFNGLC*DDMSPAHASTR Trigger: TCTGGTGGAAGCATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGCTTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR TCA 90 bp | GCAAACCACAAACATTTTAATGGTTTATGTTTGGATGATATGTCTCCTGCACATTATCTTCAGCTAACGTaGGGAACGCCTTTTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: ANHKHFNGLCLDDMSPAHYLQLT*GTPFRC Trigger: ACATCGAAAAGGCGTTCCTCACGTTAGCTGAAGATA...ATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR GCA 90 bp | AAGAAGTGGCCAAGGAGAAGAAATGGTGGCAGGAATAGTTTTAAATATCAAGGCACATCTTCATTGGCATaGTCATCTATGTTTCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: KKWPRRRNGGRNSFKYQGTSSLA*SSMFLS Trigger: GCTTAGAAACATAGATGAGCATGCCAATGAAGATGT...GCCTTGATATTTAAAACTATTCCTGCCACCATTTCTTCTCCTTGGCCACTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR GCA 90 bp | AAGAAGTGGCCAAGGAGAAGAAATGGTGGCAGGAATAGTTTTAAATATCAAGGCAAAAACCTAATACCATaGTCCCTTGCAATCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: KKWPRRRNGGRNSFKYQGKNLIP*SLAICS Trigger: AGAACAGATTGCAAGGGAGCATGGTATTAGGTTTTT...GCCTTGATATTTAAAACTATTCCTGCCACCATTTCTTCTCCTTGGCCACTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CCA 90 bp | GCAAACCACAAACATTTTAATGGTTTATGTTTGGATGATATGTCTCCTGCACATAAATATACCATGAGGTaGTTGGGGAGGGAGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ANHKHFNGLCLDDMSPAHKYTMR*LGREKQ Trigger: TTGCTTCTCCCTCCCCAACCACCTCATGGTATATTT...ATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR TCA 90 bp | GCAAACCACAAACATTTTAATGGTTTATGTTTGGATGATATGTCTCCTGCACATGATCTTATCTTTACATaGAAAGCCTTTCGTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: ANHKHFNGLCLDDMSPAHDLIFT*KAFRCP Trigger: AGGACAACGAAAGGCTTTTCATGTAAAGATAAGATC...ATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CCA 90 bp | GCAAACCACAAACATTTTAATGGTTTATGTTTGGATGATATGTCTCCTGCACATTTAATGGTTTATGTTTaGATGATATGTCTCCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: ANHKHFNGLCLDDMSPAHLMVYV*MICLLH Trigger: GTGCAGGAGACATATCATCCAAACATAAACCATTAA...ATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS CCA 90 bp | GACGGCGCGGGCGACCTACGAACAGCTTTGAGGAAGCCCCGACAGTaGCGGCGTCCAGTGCCTCCGAGGGCGGCGACCGCGGCTCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: DGAGDLRTALRKPRQ*RRPVPPRAATAAPQ Trigger: CTGCGGAGCCGCGGTCGCCGCCCTCGGAGGCACTGGACGCCGCCACTGTCGGGGCTTCCTCAAAGCTGTTCGTAGGTCGCCCGCGCCGTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS GCA 90 bp | AGGGCTTCTCGGCCGGGACGCTCCCACGGGCGAGCAAGCCTGCTCTaGCGTCGAGGAGGCGCAGCGGGCGTGAGGACAGTCTCTCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: RASRPGRSHGRASLL*RRGGAAGVRTVSLP Trigger: CGGGAGAGAGACTGTCCTCACGCCCGCTGCGCCTCCTCGACGGCAGAGCAGGCTTGCTCGCCCGTGGGAGCGTCCCGGCCGAGAAGCCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS TCA 90 bp | GTGGGAAAAAGGCTCGAGACGGCGCGGGCGACCTACGAACAGCTTTaGGGAAGCCCCGACAGTGGCGGCGTCCAGTGCCTCCGAGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VGKRLETARATYEQL*GSPDSGGVQCLRGR Trigger: CCGCCCTCGGAGGCACTGGACGCCGCCACTGTCGGGGCTTCCTCAAAGCTGTTCGTAGGTCGCCCGCGCCGTCTCGAGCCTTTTTCCCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS CCA 90 bp | CAACTCCTCACTCGGGCGTTCTCAGGCCGGAGGACCGGGGAAGCGTaGGAAAAAGGCTCGAGACGGCGCGGGCGACCTACGAACAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: QLLTRAFSGRRTGEA*EKGSRRRGRPTNSF Trigger: AAAGCTGTTCGTAGGTCGCCCGCGCCGTCTCGAGCCTTTTTCCCACGCTTCCCCGGTCCTCCGGCCTGAGAACGCCCGAGTGAGGAGTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS CCA 90 bp | GATCAGGAGCAGCTTGAAAAGCAGGTCGTACGTCTTCTTCGCCATTaGGAGGAGCGGCTCGGGCTCTCGCCGCCGGCGGCCCCAAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: DQEQLEKQVVRLLRH*EERLGLSPPAAPRD Trigger: ATCCCTTGGGGCCGCCGGCGGCGAGAGCCCGAGCCGCTCCTCCCAATGGCGAAGAAGACGTACGACCTGCTTTTCAAGCTGCTCCTGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS-3UTR CAA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTGACCTACGAACAGCTTaGAGGAAGCCCCGACAGTGG | + |
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Preference number: 5 (lower is better) Translates to: KQPVLGYQAARGVAKMQTDLRTA*RKPRQW Trigger: CCACTGTCGGGGCTTCCTCAAAGCTGTTCGTAGGTC...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CAA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTCCGATCAGGAGCAGCTaGAAAAGCAGGTCGTACGTC | + |
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Preference number: 5 (lower is better) Translates to: KQPVLGYQAARGVAKMQTPIRSS*KSRSYV Trigger: GACGTACGACCTGCTTTTCAAGCTGCTCCTGATCGG...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CAA 90 bp | CTCTTCCATTTCATAAACTCAATGGATAGACAGGAAGGGAACAAAGAGAGGAGGAATGCTCAGCAGCATTaGCTCTTCCAGCCTGTCACG | + |
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Preference number: 5 (lower is better) Translates to: LFHFINSMDRQEGNKERRNAQQH*LFQPVT Trigger: CGTGACAGGCTGGAAGAGCAAATGCTGCTGAGCATT...CCTCCTCTCTTTGTTCCCTTCCTGTCTATCCATTGAGTTTATGAAATGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CAA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTATGAAAAGCCTTTCGTaGTCCTTTTTCCAAACCCAT | + |
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Preference number: 5 (lower is better) Translates to: KQPVLGYQAARGVAKMQTMKSLS*SFFQTH Trigger: ATGGGTTTGGAAAAAGGACAACGAAAGGCTTTTCAT...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CAA 90 bp | AAACAACCTGTACTAGGCTACCAAGCTGCTAGAGGAGTTGCCAAAATGCAGACTGACAAACCTACTAGTTaGTCCCTTTCACTCTTAAAT | + |
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Preference number: 5 (lower is better) Translates to: KQPVLGYQAARGVAKMQTDKPTS*SLSLLN Trigger: ATTTAAGAGTGAAAGGGACAAACTAGTAGGTTTGTC...AGTCTGCATTTTGGCAACTCCTCTAGCAGCTTGGTAGCCTAGTACAGGTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CAA 90 bp | AAGAAGTGGCCAAGGAGAAGAAATGGTGGCAGGAATAGTTTTAAATATCAAGGCCTTTCCACATCTTCATaGGCATGCTCATCTATGTTT | + |
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Preference number: 5 (lower is better) Translates to: KKWPRRRNGGRNSFKYQGLSTSS*ACSSMF Trigger: AAACATAGATGAGCATGCCAATGAAGATGTGGAAAG...GCCTTGATATTTAAAACTATTCCTGCCACCATTTCTTCTCCTTGGCCACTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CAA 90 bp | GCAAACCACAAACATTTTAATGGTTTATGTTTGGATGATATGTCTCCTGCACATAAGCTGCTAGAGGAGTaGCCAAAATGCAGACTACTC | + |
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Preference number: 5 (lower is better) Translates to: ANHKHFNGLCLDDMSPAHKLLEE*PKCRLL Trigger: GAGTAGTCTGCATTTTGGCAACTCCTCTAGCAGCTT...ATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CAA 90 bp | AAGAAGTGGCCAAGGAGAAGAAATGGTGGCAGGAATAGTTTTAAATATCAAGGCTCGTCCATATCACACTaGTTTCCTAGTAACATTCTT | + |
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Preference number: 5 (lower is better) Translates to: KKWPRRRNGGRNSFKYQGSSISH*FPSNIL Trigger: AAGAATGTTACTAGGAAACAAGTGTGATATGGACGA...GCCTTGATATTTAAAACTATTCCTGCCACCATTTCTTCTCCTTGGCCACTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CAA 90 bp | GCAAACCACAAACATTTTAATGGTTTATGTTTGGATGATATGTCTCCTGCACATTTAGGTACAACTCTTTaGTCGTCCATATCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: ANHKHFNGLCLDDMSPAHLGTTL*SSISHL Trigger: CAAGTGTGATATGGACGACAAAAGAGTTGTACCTAA...ATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS-3UTR CAA 90 bp | GCAAACCACAAACATTTTAATGGTTTATGTTTGGATGATATGTCTCCTGCACATTCCCATATCTGTAGCTaGATCTTCTTTCCTTGTAAT | + |
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Preference number: 5 (lower is better) Translates to: ANHKHFNGLCLDDMSPAHSHICS*IFFPCN Trigger: ATTACAAGGAAAGAAGATCAAGCTACAGATATGGGA...ATGTGCAGGAGACATATCATCCAAACATAAACCATTAAAATGTTTGTGGTTTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264710.5 |
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| CDS CCA 72 bp | GGCGACCTACGAACAGCTTTGAGGAAGCCCCGACAGTaGCGGCGTCCAGTGCCTCCGAGGGCGGCGACCGCG | + |
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Preference number: 6 (lower is better) Translates to: GDLRTALRKPRQ*RRPVPPRAATA Trigger: CGCGGTCGCCGCCCTCGGAGGCACTGGACGCCGCCACTGTCGGGGCTTCCTCAAAGCTGTTCGTAGGTCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS CCA 72 bp | ACTCGGGCGTTCTCAGGCCGGAGGACCGGGGAAGCGTaGGAAAAAGGCTCGAGACGGCGCGGGCGACCTACG | + |
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Preference number: 6 (lower is better) Translates to: TRAFSGRRTGEA*EKGSRRRGRPT Trigger: CGTAGGTCGCCCGCGCCGTCTCGAGCCTTTTTCCCACGCTTCCCCGGTCCTCCGGCCTGAGAACGCCCGAGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS CAA 90 bp | CGTGGGAAAAAGGCTCGAGACGGCGCGGGCGACCTACGAACAGCTTaGAGGAAGCCCCGACAGTGGCGGCGTCCAGTGCCTCCGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RGKKARDGAGDLRTA*RKPRQWRRPVPPRA Trigger: CGCCCTCGGAGGCACTGGACGCCGCCACTGTCGGGGCTTCCTCAAAGCTGTTCGTAGGTCGCCCGCGCCGTCTCGAGCCTTTTTCCCACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS TCA 72 bp | CAAGCCTGCTCTGCCGTCGAGGAGGCGCAGCGGGCGTaGGGACAGTCTCTCTCCCGAGCGGAAACTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QACSAVEEAQRA*GQSLSRAETPC Trigger: GCAGGGAGTTTCCGCTCGGGAGAGAGACTGTCCTCACGCCCGCTGCGCCTCCTCGACGGCAGAGCAGGCTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS TCA 72 bp | AGGCTCGAGACGGCGCGGGCGACCTACGAACAGCTTTaGGGAAGCCCCGACAGTGGCGGCGTCCAGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RLETARATYEQL*GSPDSGGVQCL Trigger: GAGGCACTGGACGCCGCCACTGTCGGGGCTTCCTCAAAGCTGTTCGTAGGTCGCCCGCGCCGTCTCGAGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS CCA 72 bp | CAGCTTGAAAAGCAGGTCGTACGTCTTCTTCGCCATTaGGAGGAGCGGCTCGGGCTCTCGCCGCCGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: QLEKQVVRLLRH*EERLGLSPPAA Trigger: GGCCGCCGGCGGCGAGAGCCCGAGCCGCTCCTCCCAATGGCGAAGAAGACGTACGACCTGCTTTTCAAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS CAA 72 bp | AAGGCTCGAGACGGCGCGGGCGACCTACGAACAGCTTaGAGGAAGCCCCGACAGTGGCGGCGTCCAGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KARDGAGDLRTA*RKPRQWRRPVP Trigger: AGGCACTGGACGCCGCCACTGTCGGGGCTTCCTCAAAGCTGTTCGTAGGTCGCCCGCGCCGTCTCGAGCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264710.5 ENST00000495146.5 |
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| CDS CAA 72 bp | TGGCAACTGATGGAACAGGAGAATGCTCAGCAGCATTaGCTCTTCCAGCCTGTCACGCCTCCTCCACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: WQLMEQENAQQH*LFQPVTPPPLL Trigger: CAGCAGTGGAGGAGGCGTGACAGGCTGGAAGAGCAAATGCTGCTGAGCATTCTCCTGTTCCATCAGTTGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000264710.5 ENST00000473035.1 ENST00000495146.5 |
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| CDS CAA 90 bp | TGCTCCCTTGCAATCTGTTCTCCTTTTCCTTTAGGTACAACTCTTTaGTCGTCCATATCACACTTGTTTCCTAGTAACATTCTTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: CSLAICSPFPLGTTL*SSISHLFPSNILST Trigger: TGTGGAAAGAATGTTACTAGGAAACAAGTGTGATATGGACGACAAAAGAGTTGTACCTAAAGGAAAAGGAGAACAGATTGCAAGGGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000264710.5 ENST00000473035.1 ENST00000495146.5 |
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| CDS CAA 90 bp | TCTCCTTTTCCTTTAGGTACAACTCTTTTGTCGTCCATATCACACTaGTTTCCTAGTAACATTCTTTCCACATCTTCATTGGCATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SPFPLGTTLLSSISH*FPSNILSTSSLACS Trigger: TGAGCATGCCAATGAAGATGTGGAAAGAATGTTACTAGGAAACAAGTGTGATATGGACGACAAAAGAGTTGTACCTAAAGGAAAAGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000264710.5 ENST00000462003.5 ENST00000473035.1 |
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| CDS CAA 90 bp | TCTCCTTTTCCTTTAGGTACAACTCTTTTGTCGTCCATATCACACTaGTTTCCTAGTAACATTCTTTCCACATCTTCATTGGCATGCATA | + |
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Preference number: 6 (lower is better) Translates to: SPFPLGTTLLSSISH*FPSNILSTSSLACI Trigger: TATGCATGCCAATGAAGATGTGGAAAGAATGTTACTAGGAAACAAGTGTGATATGGACGACAAAAGAGTTGTACCTAAAGGAAAAGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495146.5 |
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| CDS CAA 72 bp | CCTTTAGGTACAACTCTTTTGTCGTCCATATCACACTaGTTTCCTAGTAACATTCTTTCCACATCTTCATTG | + |
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Preference number: 6 (lower is better) Translates to: PLGTTLLSSISH*FPSNILSTSSL Trigger: CAATGAAGATGTGGAAAGAATGTTACTAGGAAACAAGTGTGATATGGACGACAAAAGAGTTGTACCTAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000264710.5 ENST00000462003.5 ENST00000473035.1 ENST00000495146.5 |
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