RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for R3HCC1L (Homo sapiens)

Ensembl gene IDs: ENSG00000166024

Ensembl transcript IDs: ENST00000298999.8, ENST00000314594.6, ENST00000370584.7, ENST00000370586.6, ENST00000612478.4, ENST00000613938.4

Found 469 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTCCAACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTaGGATACTAAGGAATGGTCTGCCTCTGCAGGGCCTAAATCTCCC +
Preference number: 1 (lower is better)
Translates to: LSNHPLLCLQYYSAL*DTKEWSASAGPKSP
Trigger: GGGAGATTTAGGCCCTGCAGAGGCAGACCATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGTTGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR GCA 90 bp ATTTGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTaGCCTGTCCAGGCAACTCTTGGAATTCACATCTCCCACGTTTCT +
Preference number: 1 (lower is better)
Translates to: ICFKYLGSVTHANMT*PVQATLGIHISHVS
Trigger: AGAAACGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR GCA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTAGTTCACCAACTTTaGAGTTCTGGAACCGGCAGT +
Preference number: 2 (lower is better)
Translates to: GCSAAGAVPGTELSINFGVVHQL*SSGTGS
Trigger: ACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTAC...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR TCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGACGTTTCTTCCTAGCTaGTGGCTCCCTACTACGCCC +
Preference number: 2 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQTFLPS*WLPTTP
Trigger: GGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGT...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR GCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCACACGCTAACATGACTTaGCCTGTCCAGGCAACTCTT +
Preference number: 2 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAHANMT*PVQATL
Trigger: AAGAGTTGCCTGGACAGGGCAAGTCATGTTAGCGTG...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR TCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCAGCGGTCCCAGGCACTaGGCTCAGTATAAACTTTGG +
Preference number: 2 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSSGPRH*AQYKLW
Trigger: CCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCT...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR CCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGTCCAGGCAACTCTTaGAATTCACATCTCCCACGT +
Preference number: 2 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQCPGNS*NSHLPR
Trigger: ACGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACA...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR CCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATTGTCCAGGCAACTCTTaGAATTCACATCTCCCACGT +
Preference number: 2 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYCPGNS*NSHLPR
Trigger: ACGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACA...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR CCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTGTCCAGGCAACTCTTaGAATTCACATCTCCCACGT +
Preference number: 2 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSCPGNS*NSHLPR
Trigger: ACGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACA...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR CAA 90 bp GGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCTaGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTAC +
Preference number: 2 (lower is better)
Translates to: GVKTGVCLPSIPSQS*SRSLYLFNMHICMY
Trigger: GTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR TCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTATTACTCTGCTTTGTaGGATACTAAGGAATGGTCT +
Preference number: 2 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQYYSAL*DTKEWS
Trigger: AGACCATTCCTTAGTATCTCACAAAGCAGAGTAATA...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR TCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTATATTACTCTGCTTTGTaGGATACTAAGGAATGGTCT +
Preference number: 2 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVYYSAL*DTKEWS
Trigger: AGACCATTCCTTAGTATCTCACAAAGCAGAGTAATA...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR GCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACATTCTGGAACCGGCAGTaGAGATTCTGTGTATGCCAA +
Preference number: 2 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTFWNRQ*RFCVCQ
Trigger: TTGGCATACACAGAATCTGCACTGCCGGTTCCAGAA...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
3UTR-3UTR GCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACAGTAGTTCACCAACTTTaGAGTTCTGGAACCGGCAGT +
Preference number: 2 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTVVHQL*SSGTGS
Trigger: ACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTAC...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
3UTR-3UTR TCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACACCCATACTTGCGGTTTaGATCCTCTGTTCTGTTTTG +
Preference number: 2 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTPILAV*ILCSVL
Trigger: CAAAACAGAACAGAGGATTCAAACCGCAAGTATGGG...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
3UTR-3UTR CCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACACACAGCTCCCAAGGTTaGTTTACTCTGAGGAATGAA +
Preference number: 2 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTHSSQG*FTLRNE
Trigger: TTCATTCCTCAGAGTAAACCAACCTTGGGAGCTGTG...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
3UTR TCA 72 bp CACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTaGGATACTAAGGAATGGTCTGCCTCTGCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: HPLLCLQYYSAL*DTKEWSASAGP
Trigger: AGGCCCTGCAGAGGCAGACCATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR CAA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAATACCCAGTCAGTCCTaGTCTCGATCACTTTATCTC +
Preference number: 3 (lower is better)
Translates to: GCSAAGAVPGTELSINFGIPSQS*SRSLYL
Trigger: GAGATAAAGTGATCGAGACAAGGACTGACTGGGTAT...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR CAA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGATCCCATACTTGCGGTTaGAATCCTCTGTTCTGTTTT +
Preference number: 3 (lower is better)
Translates to: GCSAAGAVPGTELSINFGSHTCG*NPLFCF
Trigger: AAAACAGAACAGAGGATTCAAACCGCAAGTATGGGA...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR CAA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCCTGTCCAGGCAACTCTaGGAATTCACATCTCCCACG +
Preference number: 3 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLLSRQL*EFTSPT
Trigger: CGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACAG...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR GCA 72 bp AGTAAACCAGACACTGTTCTGCCTCTTTGTACTAACTaGTCTCCAACCACCCCCTACTCTGCCTCCAGTATT +
Preference number: 3 (lower is better)
Translates to: SKPDTVLPLCTN*SPTTPYSASSI
Trigger: AATACTGGAGGCAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTGGTTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR CAA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTAATACCCAGTCAGTCCTaGTCTCGATCACTTTATCTC +
Preference number: 3 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVIPSQS*SRSLYL
Trigger: GAGATAAAGTGATCGAGACAAGGACTGACTGGGTAT...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR CAA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCACTAAATCTCCCATACTaGCGGTTTGAATCCTCTGTT +
Preference number: 3 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSALNLPY*RFESSV
Trigger: AACAGAGGATTCAAACCGCAAGTATGGGAGATTTAG...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR GCA 72 bp AAATATCTTGGAAGTGTGACCCACGCTAACATGACTTaGCCTGTCCAGGCAACTCTTGGAATTCACATCTCC +
Preference number: 3 (lower is better)
Translates to: KYLGSVTHANMT*PVQATLGIHIS
Trigger: GGAGATGTGAATTCCAAGAGTTGCCTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR CAA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATCTAAATCTCCCATACTaGCGGTTTGAATCCTCTGTT +
Preference number: 3 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYLNLPY*RFESSV
Trigger: AACAGAGGATTCAAACCGCAAGTATGGGAGATTTAG...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR GCA 72 bp TGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTaGTTACACTGGAACTGGCACACAGCTCCCAAGGTT +
Preference number: 3 (lower is better)
Translates to: WALMFPLTTWYY*LHWNWHTAPKV
Trigger: AACCTTGGGAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR CCA 72 bp ATGTTCCCTCTTACAACATGGTATTACTGCTTACACTaGAACTGGCACACAGCTCCCAAGGTTGGTTTACTC +
Preference number: 3 (lower is better)
Translates to: MFPLTTWYYCLH*NWHTAPKVGLL
Trigger: GAGTAAACCAACCTTGGGAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
3UTR-3UTR CAA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGTCCAGGCAACTCTaGGAATTCACATCTCCCACG +
Preference number: 3 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTLSRQL*EFTSPT
Trigger: CGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACAG...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
3UTR-3UTR CAA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACATGTAGTTCACCAACTTaGCAGTTCTGGAACCGGCAG +
Preference number: 3 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTCSSPT*QFWNRQ
Trigger: CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACA...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
3UTR TCA 72 bp TGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTaGAGGCTATGGAAACATTTTCTGATTCATGGAATT +
Preference number: 3 (lower is better)
Translates to: CMYIELWKDHLI*RLWKHFLIHGI
Trigger: AATTCCATGAATCAGAAAATGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTAAAAGTTCCTTTCTaGCAGCAGCCTCACCGGCGC +
Preference number: 4 (lower is better)
Translates to: GCSAAGAVPGTELSINFGVKVPF*QQPHRR
Trigger: GCGCCGGTGAGGCTGCTGTCAGAAAGGAACTTTTAC...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370584.7
CDS-3UTR TCA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGATGCTCTTGTGGCCTGTaGCAAGGGACGAATCTTCAC +
Preference number: 4 (lower is better)
Translates to: GCSAAGAVPGTELSINFGCSCGL*QGTNLH
Trigger: GTGAAGATTCGTCCCTTGTCACAGGCCACAAGAGCA...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAAGCGGTCCCAGGCACTaGGCTCAGTATAAACTTTGG +
Preference number: 4 (lower is better)
Translates to: GCSAAGAVPGTELSINFGSGPRH*AQYKLW
Trigger: CCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCT...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGAGGACGCTCCTTTGCTaGCTGGAGGAACTCAGCATA +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQRTLLC*LEELSI
Trigger: TATGCTGAGTTCCTCCAGCCAGCAAAGGAGCGTCCT...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCGAACTTGAGCCTCGCTaGTTTCTAAACAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVELEPR*FLNRPV
Trigger: CACAGGCCTGTTTAGAAATCAGCGAGGCTCAAGTTC...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGCTTCTTGCAGTTTCTTaGGCTCTGCTTCTCGTTCGG +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQLLAVS*ALLLVR
Trigger: CCGAACGAGAAGCAGAGCTCAAGAAACTGCAAGAAG...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGGTCTCGGCGCGCTGTTaGTCTCCGCTTCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMVSARC*SPLPPS
Trigger: AGACGGCGGAAGCGGAGAGCAACAGCGCGCCGAGAC...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298999.8
CDS-3UTR GCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCATCACCGGCGCGCTGTTaGTCTCCGCTTCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSSPARC*SPLPPS
Trigger: AGACGGCGGAAGCGGAGAGCAACAGCGCGCCGGTGA...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370584.7
CDS-3UTR CCA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGCCTTGGCTGCTCTTGTaGCCTGTGACAAGGGACGAA +
Preference number: 4 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLPWLLL*PVTRDE
Trigger: TTCGTCCCTTGTCACAGGCCACAAGAGCAGCCAAGG...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGATACATGAAGAGGGGTTaGATCTGCACTCATTCCTAC +
Preference number: 4 (lower is better)
Translates to: GCSAAGAVPGTELSINFGYMKRG*ICTHSY
Trigger: GTAGGAATGAGTGCAGATGCAACCCCTCTTCATGTA...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGTTCTGGAACCGGCAGTaGAGATTCTGTGTATGCCAA +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQFWNRQ*RFCVCQ
Trigger: TTGGCATACACAGAATCTGCACTGCCGGTTCCAGAA...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCATTTCGACACCAGCCTaGACAACATGGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVISTPA*TTWQNS
Trigger: GGAGTTTTGCCATGTTGTCCAGGCTGGTGTCGAAAT...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298999.8
CDS-3UTR CCA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGATTGGAATGGTTTGCTTaGAACTTGAGCCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: GCSAAGAVPGTELSINFGLEWFA*NLSLAD
Trigger: ATCAGCGAGGCTCAAGTTCCAAGCAAACCATTCCAA...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGTGTCCAGGCAACTCTTaGAATTCACATCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQCPGNS*NSHLPR
Trigger: ACGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACA...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGGGCAGGCAGACCACTTaGGCTCAGGATTTCGACACC +
Preference number: 4 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQGRQTT*AQDFDT
Trigger: GGTGTCGAAATCCTGAGCTCAAGTGGTCTGCCTGCC...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298999.8
CDS-3UTR TCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCCAGGTTCATGCCTACTaGAGTCACAGAATTCCACAT +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVQVHAY*SHRIPH
Trigger: ATGTGGAATTCTGTGACTTCAGTAGGCATGAACCTG...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGAAGCAGAAGGGTTGCTaGAATCTTCAGTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQKQKGC*NLQCHS
Trigger: GGAATGACACTGAAGATTTCAGCAACCCTTCTGCTT...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCAAGCAGAAGGGTTGCTaGAATCTTCAGTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVKQKGC*NLQCHS
Trigger: GGAATGACACTGAAGATTTCAGCAACCCTTCTGCTT...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCCTCACCATAAATATCTaGGCAAGCAGAAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVLTINI*ASRRVA
Trigger: AGCAACCCTTCTGCTTGCTCAGATATTTATGGTGAG...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGGGAGGAAGCACAATCTaGCAAGCTCTCTATCAACTT +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQGGSTI*QALYQL
Trigger: AAGTTGATAGAGAGCTTGTCAGATTGTGCTTCCTCC...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGACTTGCTCTTCTGTTTTaGACTCTTCGGCAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: GCSAAGAVPGTELSINFGLALLF*TLRQFL
Trigger: TAAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAG...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCATGCTCTTGTGGCCTGTaGCAAGGGACGAATCTTCAC +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSACSCGL*QGTNLH
Trigger: GTGAAGATTCGTCCCTTGTCACAGGCCACAAGAGCA...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGAAGGTTGGTTTACTCTaGGGAATGAAGCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQKVGLL*GMKLVS
Trigger: GGATACCAGCTTCATTCCTCAGAGTAAACCAACCTT...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCCAGTTTCTTGAGCTCTaGTTCTCGTTCGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVQFLEL*FSFGFA
Trigger: AGCAAAACCGAACGAGAAGCAGAGCTCAAGAAACTG...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTAAGGACGCTCCTTTGCTaGCTGGAGGAACTCAGCATA +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLRTLLC*LEELSI
Trigger: TATGCTGAGTTCCTCCAGCCAGCAAAGGAGCGTCCT...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGCCAACTTTGCAGTTCTaGAACCGGCAGTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLPTLQF*NRQCRF
Trigger: GAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGG...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGGGCAGGCAGACCACTTaGGCTCAGGATTTCGACACC +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMGRQTT*AQDFDT
Trigger: GGTGTCGAAATCCTGAGCTCAAGTGGTCTGCCTGCC...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298999.8
ENST00000370586.6
CDS-3UTR TCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTAGAACTTGAGCCTCGCTaGTTTCTAAACAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLELEPR*FLNRPV
Trigger: CACAGGCCTGTTTAGAAATCAGCGAGGCTCAAGTTC...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCTCTTGTGGCCTGTaGCAAGGGACGAATCTTCAC +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQCSCGL*QGTNLH
Trigger: GTGAAGATTCGTCCCTTGTCACAGGCCACAAGAGCA...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTTCTTGCAGTTTCTTaGGCTCTGCTTCTCGTTCGG +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLLLAVS*ALLLVR
Trigger: CCGAACGAGAAGCAGAGCTCAAGAAACTGCAAGAAG...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGACGTTTCTTCCTAGCTaGTGGCTCCCTACTACGCCC +
Preference number: 4 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQTFLPS*WLPTTP
Trigger: GGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGT...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATACGTTTCTTCCTAGCTaGTGGCTCCCTACTACGCCC +
Preference number: 4 (lower is better)
Translates to: TTPYSASSITLLCEILRNTFLPS*WLPTTP
Trigger: GGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGT...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTAGCATTTGGGGCTCCCTaGTGTTGTCCTTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLAFGAP*CCPWDN
Trigger: ATTATCCCAAGGACAACAGCAGGGAGCCCCAAATGC...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCATACTACCCAGGTCAATaGCCACGGCACTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAYYPGQ*PRHCLK
Trigger: TTTCAGACAGTGCCGTGGGCATTGACCTGGGTAGTA...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCCTCCCTGAGTCATCTTaGTCTTCTGTTTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVLPESS*SSVLNS
Trigger: AGAGTTCAAAACAGAAGAGCAAGATGACTCAGGGAG...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAAACCACCCCCTACTCTaGCTCCAGTATTACTCTGCT +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSANHPLL*LQYYSA
Trigger: AGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGTT...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGATTCCACATTTTGGAATaGTTTGCTTGGAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: GCSAAGAVPGTELSINFGFHILE*FAWNLS
Trigger: GCTCAAGTTCCAAGCAAACCATTCCAAAATGTGGAA...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATAGGACGCTCCTTTGCTaGCTGGAGGAACTCAGCATA +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYRTLLC*LEELSI
Trigger: TATGCTGAGTTCCTCCAGCCAGCAAAGGAGCGTCCT...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCACCAACTTTGCAGTTCTaGAACCGGCAGTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAPTLQF*NRQCRF
Trigger: GAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGG...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGATTCCCTCTTACAACATaGTATTACTGCTTACACTGG +
Preference number: 4 (lower is better)
Translates to: GCSAAGAVPGTELSINFGFPLTT*YYCLHW
Trigger: CCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAA...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCACACCACAGAGTTAGGTaGACCACAGCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAHHRVR*TTAFFF
Trigger: GAAGAAGAAAGCTGTGGTTCACCTAACTCTGTGGTG...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGCCTTTCTATCAGGATTaGTATTTAGTCTTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQPFYQD*YLVFEP
Trigger: AGGCTCGAAGACTAAATATCAATCCTGATAGAAAGG...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCAAATCTACGCAAGTTTaGTCAAAGACACCATCTGGA +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVKSTQV*SKTPSG
Trigger: TCCAGATGGTGTCTTTGATCAAACTTGCGTAGATTT...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCATCTGACAGAGAGATGTaGCCCATAGTTGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSASDREM*PIVAGM
Trigger: CATTCCTGCAACTATGGGTCACATCTCTCTGTCAGA...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTATCTGACAGAGAGATGTaGCCCATAGTTGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLSDREM*PIVAGM
Trigger: CATTCCTGCAACTATGGGTCACATCTCTCTGTCAGA...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCCTATCAACAGTTACATaGTCACTACAGGACATACCT +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVLSTVT*SLQDIP
Trigger: AGGTATGTCCTGTAGTGATCATGTAACTGTTGATAG...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCCCACTTCTAGCTACATaGAGAGGGGTTGCATCTGCA +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSPLLAT*RGVASA
Trigger: TGCAGATGCAACCCCTCTTCATGTAGCTAGAAGTGG...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTAGCCCACGGCACTGTCTaGAAGAACTTTTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVAHGTV*KNFCPI
Trigger: AATGGGACAAAAGTTCTTTCAGACAGTGCCGTGGGC...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGGCCCACGGCACTGTCTaGAAGAACTTTTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQAHGTV*KNFCPI
Trigger: AATGGGACAAAAGTTCTTTCAGACAGTGCCGTGGGC...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGGGAATTCACAATCACTaGGGTCAATATCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQGIHNH*GQYQEL
Trigger: AAGTTCCTGATATTGACCTCAGTGATTGTGAATTCC...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCAGAAGGTCTTCAGTATaGAATTCTTGGGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVRRSSV*NSWGKS
Trigger: TGACTTTCCCCAAGAATTTCATACTGAAGACCTTCT...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCCTTCTTGCAGTTTCTTaGGCTCTGCTTCTCGTTCGG +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSLLAVS*ALLLVR
Trigger: CCGAACGAGAAGCAGAGCTCAAGAAACTGCAAGAAG...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCAGCGGTCCCAGGCACTaGGCTCAGTATAAACTTTGG +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVSGPRH*AQYKLW
Trigger: CCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCT...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTAGCATTTGGGGCTCCCTaGTGTTGTCCTTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVAFGAP*CCPWDN
Trigger: ATTATCCCAAGGACAACAGCAGGGAGCCCCAAATGC...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGTCCCCATCAGGTTCATaGCTACTGAAGTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLSPSGS*LLKSQN
Trigger: ATTCTGTGACTTCAGTAGGCATGAACCTGATGGGGA...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGGTAACTCATCAGCAGTaGTGTCATTCTTCTCACATT +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQVTHQQ*CHSSHI
Trigger: AATGTGAGAAGAATGACAGCACTGCTGATGAGTTAC...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTACTACCCAGGTCAATaGCCACGGCACTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQYYPGQ*PRHCLK
Trigger: TTTCAGACAGTGCCGTGGGCATTGACCTGGGTAGTA...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGCACGCTAACATGACTTaGCCTGTCCAGGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQHANMT*PVQATL
Trigger: AAGAGTTGCCTGGACAGGGCAAGTCATGTTAGCGTG...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCCACGCTAACATGACTTaGCCTGTCCAGGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSHANMT*PVQATL
Trigger: AAGAGTTGCCTGGACAGGGCAAGTCATGTTAGCGTG...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCAACCACCCCCTACTCTaGCTCCAGTATTACTCTGCT +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSNHPLL*LQYYSA
Trigger: AGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGTT...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCATTCTGGAACCGGCAGTaGAGATTCTGTGTATGCCAA +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAFWNRQ*RFCVCQ
Trigger: TTGGCATACACAGAATCTGCACTGCCGGTTCCAGAA...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGTATAACCCCAGCATTTaGGGCTCCCTGCTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQYNPSI*GSLLLS
Trigger: GGACAACAGCAGGGAGCCCCAAATGCTGGGGTTATA...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGCCTTGGCTGCTCTTGTaGCCTGTGACAAGGGACGAA +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMPWLLL*PVTRDE
Trigger: TTCGTCCCTTGTCACAGGCCACAAGAGCAGCCAAGG...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATAGGACGCTCCTTTGCTaGCTGGAGGAACTCAGCATA +
Preference number: 4 (lower is better)
Translates to: TTPYSASSITLLCEILRNRTLLC*LEELSI
Trigger: TATGCTGAGTTCCTCCAGCCAGCAAAGGAGCGTCCT...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCAGGACGCTCCTTTGCTaGCTGGAGGAACTCAGCATA +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVRTLLC*LEELSI
Trigger: TATGCTGAGTTCCTCCAGCCAGCAAAGGAGCGTCCT...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCTGTCTTCCCGTTGCTTaGCTTCCAACCGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSCLPVA*LPTAFS
Trigger: AGAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACA...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTATGTCTTCCCGTTGCTTaGCTTCCAACCGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVCLPVA*LPTAFS
Trigger: AGAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACA...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGTTCAAACTGTAGACTaGTCTCTGCCTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAVQTVD*SLPSQM
Trigger: CATCTGGGAAGGCAGAGACCAGTCTACAGTTTGAAC...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCTTACACTGGAACTaGCACACAGCTCCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQCLHWN*HTAPKV
Trigger: AACCTTGGGAGCTGTGTGCCAGTTCCAGTGTAAGCA...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTATGCTTACACTGGAACTaGCACACAGCTCCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVCLHWN*HTAPKV
Trigger: AACCTTGGGAGCTGTGTGCCAGTTCCAGTGTAAGCA...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCATATTACTGCTTACACTaGAACTGGCACACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAYYCLH*NWHTAP
Trigger: GGGAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATA...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCGAACTTGAGCCTCGCTaGTTTCTAAACAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVELEPR*FLNRPV
Trigger: CACAGGCCTGTTTAGAAATCAGCGAGGCTCAAGTTC...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCTCTGACAGAGAGATGTaGCCCATAGTTGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSSDREM*PIVAGM
Trigger: CATTCCTGCAACTATGGGTCACATCTCTCTGTCAGA...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCCACTTCTAGCTACATaGAGAGGGGTTGCATCTGCA +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVPLLAT*RGVASA
Trigger: TGCAGATGCAACCCCTCTTCATGTAGCTAGAAGTGG...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTCACCATAAATATCTaGGCAAGCAGAAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLLTINI*ASRRVA
Trigger: AGCAACCCTTCTGCTTGCTCAGATATTTATGGTGAG...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGCTTCTTGCAGTTTCTTaGGCTCTGCTTCTCGTTCGG +
Preference number: 4 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQLLAVS*ALLLVR
Trigger: CCGAACGAGAAGCAGAGCTCAAGAAACTGCAAGAAG...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCACCCATACTTGCGGTTTaGATCCTCTGTTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAPILAV*ILCSVL
Trigger: CAAAACAGAACAGAGGATTCAAACCGCAAGTATGGG...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGTATTACTCTGCTTTGTaGGATACTAAGGAATGGTCT +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQYYSAL*DTKEWS
Trigger: AGACCATTCCTTAGTATCTCACAAAGCAGAGTAATA...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAAGCGGTCCCAGGCACTaGGCTCAGTATAAACTTTGG +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSSGPRH*AQYKLW
Trigger: CCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCT...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATTGTCTTAAGGAGTACTaGACCCCTACGAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYCLKEY*TPTSFR
Trigger: CCTAAAGCTCGTAGGGGTGCAGTACTCCTTAAGACA...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGAGTGTCCATCATACATaGTTTATTGGTAATGTCACC +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQSVHHT*FIGNVT
Trigger: GGTGACATTACCAATAAAGCATGTATGATGGACACT...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTATACATGAAGAGGGGTTaGATCTGCACTCATTCCTAC +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLYMKRG*ICTHSY
Trigger: GTAGGAATGAGTGCAGATGCAACCCCTCTTCATGTA...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCCCTGGATGCTCTCTCTaGTCTTGGTATTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSPGCSL*SWYSLI
Trigger: TATCAGGGAATACCAAGAGCAGAGAGAGCATCCAGG...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCCGTTCGGTTTTGCTCTaGTTACTTCGAACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLRSVLL*LLRTPR
Trigger: CCTTGGGGTTCGAAGTAAGCAGAGCAAAACCGAACG...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATCGTTCGGTTTTGCTCTaGTTACTTCGAACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: TTPYSASSITLLCEILRNRSVLL*LLRTPR
Trigger: CCTTGGGGTTCGAAGTAAGCAGAGCAAAACCGAACG...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGCTTCTCGTTCGGTTTTaGTCTGCTTACTTCGAACCC +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQLLVRF*SAYFEP
Trigger: GGGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAG...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTACTTCTCGTTCGGTTTTaGTCTGCTTACTTCGAACCC +
Preference number: 4 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVLLVRF*SAYFEP
Trigger: GGGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAG...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTTCTGGAACCGGCAGTaGAGATTCTGTGTATGCCAA +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQFWNRQ*RFCVCQ
Trigger: TTGGCATACACAGAATCTGCACTGCCGGTTCCAGAA...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCTTCTGGAACCGGCAGTaGAGATTCTGTGTATGCCAA +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSFWNRQ*RFCVCQ
Trigger: TTGGCATACACAGAATCTGCACTGCCGGTTCCAGAA...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTAGTAGTTCACCAACTTTaGAGTTCTGGAACCGGCAGT +
Preference number: 4 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVVVHQL*SSGTGS
Trigger: ACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTAC...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCGTAGTTCACCAACTTTaGAGTTCTGGAACCGGCAGT +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSVVHQL*SSGTGS
Trigger: ACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTAC...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATCTCTCTGATTCTTGCTaGATGGCACCACCACAATCT +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYLSDSC*MAPPQS
Trigger: AGATTGTGGTGGTGCCATGCAGCAAGAATCAGAGAG...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCATTTCGACACCAGCCTaGACAACATGGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSISTPA*TTWQNS
Trigger: GGAGTTTTGCCATGTTGTCCAGGCTGGTGTCGAAAT...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298999.8
ENST00000370586.6
CDS-3UTR CCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTGATTCTTGCTGCATaGCACCACCACAATCATGTA +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLLILAA*HHHNHV
Trigger: TACATGATTGTGGTGGTGCCATGCAGCAAGAATCAG...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298999.8
ENST00000314594.6
CDS-3UTR CCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTATAACCCCAGCATTTaGGGCTCCCTGCTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSYNPSI*GSLLLS
Trigger: GGACAACAGCAGGGAGCCCCAAATGCTGGGGTTATA...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGCAGAATTCCACATTTTaGAATGGTTTGCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQQNSTF*NGLLGT
Trigger: AGTTCCAAGCAAACCATTCCAAAATGTGGAATTCTG...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGGTATCTCCAAAACCTTaGTATCAGTTTCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQVSPKP*YQFQFC
Trigger: GCAGAATTGAAACTGATACCAAGGTTTTGGAGATAC...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCAGTTTCAGTTGCTTTTaGTTCGATGGATGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: CSAAGAVPGTELSINFGVSFSCF*FDGCFH
Trigger: ATGGAAACATCCATCGAACCAAAAGCAACTGAAACT...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCACCTTGGCTGCTCTTGTaGCCTGTGACAAGGGACGAA +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAPWLLL*PVTRDE
Trigger: TTCGTCCCTTGTCACAGGCCACAAGAGCAGCCAAGG...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCTGTCTTCCCGTTGCTTaGCTTCCAACCGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVCLPVA*LPTAFS
Trigger: AGAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACA...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCTGTCTTCCCGTTGCTTaGCTTCCAACCGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLCLPVA*LPTAFS
Trigger: AGAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACA...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGCCAACTTTGCAGTTCTaGAACCGGCAGTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQPTLQF*NRQCRF
Trigger: GAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGG...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACACAGCTCCCAAGGTTaGTTTACTCTGAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLHSSQG*FTLRNE
Trigger: TTCATTCCTCAGAGTAAACCAACCTTGGGAGCTGTG...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATTGCTTACACTGGAACTaGCACACAGCTCCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: TTPYSASSITLLCEILRNCLHWN*HTAPKV
Trigger: AACCTTGGGAGCTGTGTGCCAGTTCCAGTGTAAGCA...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTATTACTGCTTACACTaGAACTGGCACACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQYYCLH*NWHTAP
Trigger: GGGAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATA...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCCTGATTCTTGCTGCATaGCACCACCACAATCTTAGG +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSLILAA*HHHNLR
Trigger: CCTAAGATTGTGGTGGTGCCATGCAGCAAGAATCAG...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCACCACAGAGTTAGGTaGACCACAGCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVHHRVR*TTAFFF
Trigger: GAAGAAGAAAGCTGTGGTTCACCTAACTCTGTGGTG...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCATCTCTATGTGTTTCATaGGCAAGGACAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSASLCVS*ARTAVS
Trigger: TGATACAGCTGTCCTTGCTCATGAAACACATAGAGA...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGCCACTTCTAGCTACATaGAGAGGGGTTGCATCTGCA +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMPLLAT*RGVASA
Trigger: TGCAGATGCAACCCCTCTTCATGTAGCTAGAAGTGG...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGAAGCAGAAGGGTTGCTaGAATCTTCAGTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQKQKGC*NLQCHS
Trigger: GGAATGACACTGAAGATTTCAGCAACCCTTCTGCTT...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCGGAGGAAGCACAATCTaGCAAGCTCTCTATCAACTT +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSGGSTI*QALYQL
Trigger: AAGTTGATAGAGAGCTTGTCAGATTGTGCTTCCTCC...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTAGGAGGAAGCACAATCTaGCAAGCTCTCTATCAACTT +
Preference number: 4 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVGGSTI*QALYQL
Trigger: AAGTTGATAGAGAGCTTGTCAGATTGTGCTTCCTCC...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGCTCTTGTGGCCTGTaGCAAGGGACGAATCTTCAC +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSACSCGL*QGTNLH
Trigger: GTGAAGATTCGTCCCTTGTCACAGGCCACAAGAGCA...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGCTTCTTGCAGTTTCTTaGGCTCTGCTTCTCGTTCGG +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMLLAVS*ALLLVR
Trigger: CCGAACGAGAAGCAGAGCTCAAGAAACTGCAAGAAG...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGATCCCTTTCATTGAGTaGTGTTCAAACTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLIPFIE*CSNCRL
Trigger: CAGTCTACAGTTTGAACATCACTCAATGAAAGGGAT...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCAAGCGGTCCCAGGCACTaGGCTCAGTATAAACTTTGG +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSASGPRH*AQYKLW
Trigger: CCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCT...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTAAAGGTTGGTTTACTCTaGGGAATGAAGCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVKVGLL*GMKLVS
Trigger: GGATACCAGCTTCATTCCTCAGAGTAAACCAACCTT...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCAAGGTTGGTTTACTCTaGGGAATGAAGCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSKVGLL*GMKLVS
Trigger: GGATACCAGCTTCATTCCTCAGAGTAAACCAACCTT...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGCACCACAATCTTAGGTaGCTCTGGAGTCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQHHNLR*LWSLRR
Trigger: TCTTCTGAGACTCCAGAGTCACCTAAGATTGTGGTG...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCACCACAATCTTAGGTaGCTCTGGAGTCTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVHHNLR*LWSLRR
Trigger: TCTTCTGAGACTCCAGAGTCACCTAAGATTGTGGTG...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATTCAGGAAAACAGCAATaGAGCAGGTGCAGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: TTPYSASSITLLCEILRNSGKQQ*SRCRLQ
Trigger: TTGAAGCCTGCACCTGCTGCATTGCTGTTTTCCTGA...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298999.8
CDS-3UTR GCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCTGTCTTAAGGAGTACTaGACCCCTACGAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVCLKEY*TPTSFR
Trigger: CCTAAAGCTCGTAGGGGTGCAGTACTCCTTAAGACA...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATTACATGAAGAGGGGTTaGATCTGCACTCATTCCTAC +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYYMKRG*ICTHSY
Trigger: GTAGGAATGAGTGCAGATGCAACCCCTCTTCATGTA...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTACTACCCAGGTCAATaGCCACGGCACTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSYYPGQ*PRHCLK
Trigger: TTTCAGACAGTGCCGTGGGCATTGACCTGGGTAGTA...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCATACTACCCAGGTCAATaGCCACGGCACTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSYYPGQ*PRHCLK
Trigger: TTTCAGACAGTGCCGTGGGCATTGACCTGGGTAGTA...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGGCAGTTCTTAGTTCGTaGAATGCTTCTGTTGTATCA +
Preference number: 4 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLAVLSS*NASVVS
Trigger: TGATACAACAGAAGCATTGCACGAACTAAGAACTGC...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCACTCCCTGAGTCATCTTaGTCTTCTGTTTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSALPESS*SSVLNS
Trigger: AGAGTTCAAAACAGAAGAGCAAGATGACTCAGGGAG...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCCCTGGATGCTCTCTCTaGTCTTGGTATTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLPGCSL*SWYSLI
Trigger: TATCAGGGAATACCAAGAGCAGAGAGAGCATCCAGG...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCCGTTCGGTTTTGCTCTaGTTACTTCGAACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSRSVLL*LLRTPR
Trigger: CCTTGGGGTTCGAAGTAAGCAGAGCAAAACCGAACG...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTACAGTTTCTTGAGCTCTaGTTCTCGTTCGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVQFLEL*FSFGFA
Trigger: AGCAAAACCGAACGAGAAGCAGAGCTCAAGAAACTG...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGAACCACCCCCTACTCTaGCTCCAGTATTACTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMNHPLL*LQYYSA
Trigger: AGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGTT...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCAACCACCCCCTACTCTaGCTCCAGTATTACTCTGCT +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSNHPLL*LQYYSA
Trigger: AGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGTT...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAAACCAGACACTGTTCTaGCTCTTTGTACTAACTGCT +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSANQTLF*LFVLTA
Trigger: AGCAGTTAGTACAAAGAGGCAGAACAGTGTCTGGTT...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCGTAGTTCACCAACTTTaGAGTTCTGGAACCGGCAGT +
Preference number: 4 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLVVHQL*SSGTGS
Trigger: ACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTAC...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATATAACCCCAGCATTTaGGGCTCCCTGCTGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETYNPSI*GSLLLS
Trigger: GGACAACAGCAGGGAGCCCCAAATGCTGGGGTTATA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCTTGGAATGGTTTGCTTaGAACTTGAGCCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSLEWFA*NLSLAD
Trigger: ATCAGCGAGGCTCAAGTTCCAAGCAAACCATTCCAA...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACACCTTGGCTGCTCTTGTaGCCTGTGACAAGGGACGAA +
Preference number: 4 (lower is better)
Translates to: VSPCLDHFISLTCTSACTPWLLL*PVTRDE
Trigger: TTCGTCCCTTGTCACAGGCCACAAGAGCAGCCAAGG...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGCCTTGGCTGCTCTTGTaGCCTGTGACAAGGGACGAA +
Preference number: 4 (lower is better)
Translates to: SRSLYLFNMHICMYIELWPWLLL*PVTRDE
Trigger: TTCGTCCCTTGTCACAGGCCACAAGAGCAGCCAAGG...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTGTCTTCCCGTTGCTTaGCTTCCAACCGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSCLPVA*LPTAFS
Trigger: AGAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACA...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCACCAACTTTGCAGTTCTaGAACCGGCAGTGCAGATTC +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSPTLQF*NRQCRF
Trigger: GAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGG...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATCACAGCTCCCAAGGTTaGTTTACTCTGAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYHSSQG*FTLRNE
Trigger: TTCATTCCTCAGAGTAAACCAACCTTGGGAGCTGTG...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTGCTTACACTGGAACTaGCACACAGCTCCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMCLHWN*HTAPKV
Trigger: AACCTTGGGAGCTGTGTGCCAGTTCCAGTGTAAGCA...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGTTCCCTCTTACAACATaGTATTACTGCTTACACTGG +
Preference number: 4 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLFPLTT*YYCLHW
Trigger: CCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAA...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTCTCTATGTGTTTCATaGGCAAGGACAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQSLCVS*ARTAVS
Trigger: TGATACAGCTGTCCTTGCTCATGAAACACATAGAGA...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGCTCACCATAAATATCTaGGCAAGCAGAAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQLTINI*ASRRVA
Trigger: AGCAACCCTTCTGCTTGCTCAGATATTTATGGTGAG...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCAGCCCACGGCACTGTCTaGAAGAACTTTTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAAHGTV*KNFCPI
Trigger: AATGGGACAAAAGTTCTTTCAGACAGTGCCGTGGGC...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACAGCCCACGGCACTGTCTaGAAGAACTTTTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETAHGTV*KNFCPI
Trigger: AATGGGACAAAAGTTCTTTCAGACAGTGCCGTGGGC...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTAGGAATTCACAATCACTaGGGTCAATATCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLGIHNH*GQYQEL
Trigger: AAGTTCCTGATATTGACCTCAGTGATTGTGAATTCC...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATGCTCTTGTGGCCTGTaGCAAGGGACGAATCTTCAC +
Preference number: 4 (lower is better)
Translates to: VSPCLDHFISLTCTSACTCSCGL*QGTNLH
Trigger: GTGAAGATTCGTCCCTTGTCACAGGCCACAAGAGCA...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAACGTTTCTTCCTAGCTaGTGGCTCCCTACTACGCCC +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYITFLPS*WLPTTP
Trigger: GGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGT...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCCCCATACTTGCGGTTTaGATCCTCTGTTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLPILAV*ILCSVL
Trigger: CAAAACAGAACAGAGGATTCAAACCGCAAGTATGGG...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCCCATACTTGCGGTTTaGATCCTCTGTTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVPILAV*ILCSVL
Trigger: CAAAACAGAACAGAGGATTCAAACCGCAAGTATGGG...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGAGCGGTCCCAGGCACTaGGCTCAGTATAAACTTTGG +
Preference number: 4 (lower is better)
Translates to: SRSLYLFNMHICMYIELWSGPRH*AQYKLW
Trigger: CCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCT...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCCTCTCTGATTCTTGCTaGATGGCACCACCACAATCA +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSLSDSC*MAPPQS
Trigger: TGATTGTGGTGGTGCCATGCAGCAAGAATCAGAGAG...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298999.8
ENST00000314594.6
CDS-3UTR GCA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCTCCCCATCAGGTTCATaGCTACTGAAGTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLSPSGS*LLKSQN
Trigger: ATTCTGTGACTTCAGTAGGCATGAACCTGATGGGGA...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGGATGTGACCCATAGTTaGAGGAATGGAATCTGTATC +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQDVTHS*RNGICI
Trigger: GATACAGATTCCATTCCTGCAACTATGGGTCACATC...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTAGTAACTCATCAGCAGTaGTGTCATTCTTCTCACATT +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLVTHQQ*CHSSHI
Trigger: AATGTGAGAAGAATGACAGCACTGCTGATGAGTTAC...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGTAACTCATCAGCAGTaGTGTCATTCTTCTCACATT +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAVTHQQ*CHSSHI
Trigger: AATGTGAGAAGAATGACAGCACTGCTGATGAGTTAC...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTAGTATCAGGAGGTTCGTaGTTTACATGTAACTCATCA +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLVSGGS*FTCNSS
Trigger: TGATGAGTTACATGTAAAGCACGAACCTCCTGATAC...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGAGTGTCCATCATACATaGTTTATTGGTAATGTCACC +
Preference number: 4 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLSVHHT*FIGNVT
Trigger: GGTGACATTACCAATAAAGCATGTATGATGGACACT...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATAAGAGGGGTTGCATCTaGACTCATTCCTACAAACTT +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYKRGCI*THSYKL
Trigger: AAGTTTGTAGGAATGAGTGCAGATGCAACCCCTCTT...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCAAGAGGGGTTGCATCTaGACTCATTCCTACAAACTT +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSKRGCI*THSYKL
Trigger: AAGTTTGTAGGAATGAGTGCAGATGCAACCCCTCTT...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATTACATGAAGAGGGGTTaGATCTGCACTCATTCCTAC +
Preference number: 4 (lower is better)
Translates to: TTPYSASSITLLCEILRNYMKRG*ICTHSY
Trigger: GTAGGAATGAGTGCAGATGCAACCCCTCTTCATGTA...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATCTCCCTGAGTCATCTTaGTCTTCTGTTTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYLPESS*SSVLNS
Trigger: AGAGTTCAAAACAGAAGAGCAAGATGACTCAGGGAG...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCACCTGGATGCTCTCTCTaGTCTTGGTATTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSPGCSL*SWYSLI
Trigger: TATCAGGGAATACCAAGAGCAGAGAGAGCATCCAGG...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCACTTCTCGTTCGGTTTTaGTCTGCTTACTTCGAACCC +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSLLVRF*SAYFEP
Trigger: GGGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAG...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCACACGCTAACATGACTTaGCCTGTCCAGGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAHANMT*PVQATL
Trigger: AAGAGTTGCCTGGACAGGGCAAGTCATGTTAGCGTG...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGGTAGTTCACCAACTTTaGAGTTCTGGAACCGGCAGT +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMVVHQL*SSGTGS
Trigger: ACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTAC...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGCCCTGCTGTTGTCCTTaGGATAATACTTCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQPCCCP*DNTSLD
Trigger: ATCCAAAGAAGTATTATCCCAAGGACAACAGCAGGG...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCATTCCACATTTTGGAATaGTTTGCTTGGAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAFHILE*FAWNLS
Trigger: GCTCAAGTTCCAAGCAAACCATTCCAAAATGTGGAA...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGCAGAATTCCACATTTTaGAATGGTTTGCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLQNSTF*NGLLGT
Trigger: AGTTCCAAGCAAACCATTCCAAAATGTGGAATTCTG...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCATCAAAGACACCATCTaGACTTCCAGGAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSIKDTI*TSRNRS
Trigger: ACTTCTGTTCCTGGAAGTCCAGATGGTGTCTTTGAT...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGAGTTTCAGTTGCTTTTaGTTCGATGGATGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLSFSCF*FDGCFH
Trigger: ATGGAAACATCCATCGAACCAAAAGCAACTGAAACT...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATTGCTCTCTCTGCTCTTaGTATTCCCTGATAACTCTT +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYCSLCS*YSLITL
Trigger: AAGAGTTATCAGGGAATACCAAGAGCAGAGAGAGCA...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
CDS-3UTR CCA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGAGGACGCTCCTTTGCTaGCTGGAGGAACTCAGCATA +
Preference number: 4 (lower is better)
Translates to: SRSLYLFNMHICMYIELWRTLLC*LEELSI
Trigger: TATGCTGAGTTCCTCCAGCCAGCAAAGGAGCGTCCT...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGGTTCAAACTGTAGACTaGTCTCTGCCTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMVQTVD*SLPSQM
Trigger: CATCTGGGAAGGCAGAGACCAGTCTACAGTTTGAAC...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCGTTCAAACTGTAGACTaGTCTCTGCCTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSVQTVD*SLPSQM
Trigger: CATCTGGGAAGGCAGAGACCAGTCTACAGTTTGAAC...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCCACAGCTCCCAAGGTTaGTTTACTCTGAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLHSSQG*FTLRNE
Trigger: TTCATTCCTCAGAGTAAACCAACCTTGGGAGCTGTG...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTATTCCCTCTTACAACATaGTATTACTGCTTACACTGG +
Preference number: 4 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLFPLTT*YYCLHW
Trigger: CCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAA...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATTGCTCTCTCTGCTCTTaGTATTCCCTGATAACATGT +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYCSLCS*YSLITC
Trigger: ACATGTTATCAGGGAATACCAAGAGCAGAGAGAGCA...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613938.4
CDS-3UTR CCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCTGCTCTCTCTGCTCTTaGTATTCCCTGATAACTTTG +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSCSLCS*YSLITL
Trigger: CAAAGTTATCAGGGAATACCAAGAGCAGAGAGAGCA...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612478.4
3UTR CAA 72 bp AGTCTAAATACCCACATCTCCTGTAGTTCACCAACTTaGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: SLNTHISCSSPT*QFWNRQCRFCV
Trigger: TACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACACACCACAGAGTTAGGTaGACCACAGCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETHHRVR*TTAFFF
Trigger: GAAGAAGAAAGCTGTGGTTCACCTAACTCTGTGGTG...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATCCTTTCTATCAGGATTaGTATTTAGTCTTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYPFYQD*YLVFEP
Trigger: AGGCTCGAAGACTAAATATCAATCCTGATAGAAAGG...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCCAGGTTCATGCCTACTaGAGTCACAGAATTCCACAT +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSQVHAY*SHRIPH
Trigger: ATGTGGAATTCTGTGACTTCAGTAGGCATGAACCTG...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCAAATCTACGCAAGTTTaGTCAAAGACACCATCTGGA +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSKSTQV*SKTPSG
Trigger: TCCAGATGGTGTCTTTGATCAAACTTGCGTAGATTT...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCTCTCTATGTGTTTCATaGGCAAGGACAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVSLCVS*ARTAVS
Trigger: TGATACAGCTGTCCTTGCTCATGAAACACATAGAGA...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTACTATCAACAGTTACATaGTCACTACAGGACATACCT +
Preference number: 4 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVLSTVT*SLQDIP
Trigger: AGGTATGTCCTGTAGTGATCATGTAACTGTTGATAG...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATCTATCAACAGTTACATaGTCACTACAGGACATACCT +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYLSTVT*SLQDIP
Trigger: AGGTATGTCCTGTAGTGATCATGTAACTGTTGATAG...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCCTTGCTCTTCTGTTTTaGACTCTTCGGCAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLLALLF*TLRQFL
Trigger: TAAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAG...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGGAATTCACAATCACTaGGGTCAATATCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYGIHNH*GQYQEL
Trigger: AAGTTCCTGATATTGACCTCAGTGATTGTGAATTCC...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATAGAAGGTCTTCAGTATaGAATTCTTGGGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYRRSSV*NSWGKS
Trigger: TGACTTTCCCCAAGAATTTCATACTGAAGACCTTCT...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCCCCATACTTGCGGTTTaGATCCTCTGTTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSPILAV*ILCSVL
Trigger: CAAAACAGAACAGAGGATTCAAACCGCAAGTATGGG...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCACTCTCTGATTCTTGCTaGATGGCACCACCACAATCA +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSALSDSC*MAPPQS
Trigger: TGATTGTGGTGGTGCCATGCAGCAAGAATCAGAGAG...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298999.8
ENST00000314594.6
CDS-3UTR GCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATTTGGGGCTCCCTaGTGTTGTCCTTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSAFGAP*CCPWDN
Trigger: ATTATCCCAAGGACAACAGCAGGGAGCCCCAAATGC...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCGATGTGACCCATAGTTaGAGGAATGGAATCTGTATC +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVDVTHS*RNGICI
Trigger: GATACAGATTCCATTCCTGCAACTATGGGTCACATC...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCGCAGTTCTTAGTTCGTaGAATGCTTCTGTTGTATCA +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSAVLSS*NASVVS
Trigger: TGATACAACAGAAGCATTGCACGAACTAAGAACTGC...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACACCTGGATGCTCTCTCTaGTCTTGGTATTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETPGCSL*SWYSLI
Trigger: TATCAGGGAATACCAAGAGCAGAGAGAGCATCCAGG...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGCGTTCGGTTTTGCTCTaGTTACTTCGAACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SRSLYLFNMHICMYIELWRSVLL*LLRTPR
Trigger: CCTTGGGGTTCGAAGTAAGCAGAGCAAAACCGAACG...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCACTTCTCGTTCGGTTTTaGTCTGCTTACTTCGAACCC +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSALLVRF*SAYFEP
Trigger: GGGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAG...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCACAGTTTCTTGAGCTCTaGTTCTCGTTCGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSQFLEL*FSFGFA
Trigger: AGCAAAACCGAACGAGAAGCAGAGCTCAAGAAACTG...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGCAGTTTCTTGAGCTCTaGTTCTCGTTCGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMQFLEL*FSFGFA
Trigger: AGCAAAACCGAACGAGAAGCAGAGCTCAAGAAACTG...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGCACGCTAACATGACTTaGCCTGTCCAGGCAACTCTT +
Preference number: 4 (lower is better)
Translates to: SRSLYLFNMHICMYIELWHANMT*PVQATL
Trigger: AAGAGTTGCCTGGACAGGGCAAGTCATGTTAGCGTG...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATAACCAGACACTGTTCTaGCTCTTTGTACTAACTGCT +
Preference number: 4 (lower is better)
Translates to: TTPYSASSITLLCEILRNNQTLF*LFVLTA
Trigger: AGCAGTTAGTACAAAGAGGCAGAACAGTGTCTGGTT...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCAACCAGACACTGTTCTaGCTCTTTGTACTAACTGCT +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVNQTLF*LFVLTA
Trigger: AGCAGTTAGTACAAAGAGGCAGAACAGTGTCTGGTT...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATTCTGGAACCGGCAGTaGAGATTCTGTGTATGCCAA +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETFWNRQ*RFCVCQ
Trigger: TTGGCATACACAGAATCTGCACTGCCGGTTCCAGAA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCCTGATTCTTGCTGCATaGCACCACCACAATCATGTA +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSLILAA*HHHNHV
Trigger: TACATGATTGTGGTGGTGCCATGCAGCAAGAATCAG...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298999.8
ENST00000314594.6
CDS-3UTR CCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCACAGAATTCCACATTTTaGAATGGTTTGCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAQNSTF*NGLLGT
Trigger: AGTTCCAAGCAAACCATTCCAAAATGTGGAATTCTG...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGTATCTCCAAAACCTTaGTATCAGTTTCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAVSPKP*YQFQFC
Trigger: GCAGAATTGAAACTGATACCAAGGTTTTGGAGATAC...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACAGTTCAAACTGTAGACTaGTCTCTGCCTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETVQTVD*SLPSQM
Trigger: CATCTGGGAAGGCAGAGACCAGTCTACAGTTTGAAC...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTCCAGGCAACTCTTaGAATTCACATCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSACPGNS*NSHLPR
Trigger: ACGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACA...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTTGCTTACACTGGAACTaGCACACAGCTCCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSCLHWN*HTAPKV
Trigger: AACCTTGGGAGCTGTGTGCCAGTTCCAGTGTAAGCA...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATATTACTGCTTACACTaGAACTGGCACACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAYYCLH*NWHTAP
Trigger: GGGAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATA...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATATTACTGCTTACACTaGAACTGGCACACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETYYCLH*NWHTAP
Trigger: GGGAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGCCTTTCTATCAGGATTaGTATTTAGTCTTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQPFYQD*YLVFEP
Trigger: AGGCTCGAAGACTAAATATCAATCCTGATAGAAAGG...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATAAATTCTATACTCCCTaGGTCATCTTGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TTPYSASSITLLCEILRNKFYTP*VILLFC
Trigger: ACAGAAGAGCAAGATGACTCAGGGAGTATAGAATTT...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCAAATTCTATACTCCCTaGGTCATCTTGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVKFYTP*VILLFC
Trigger: ACAGAAGAGCAAGATGACTCAGGGAGTATAGAATTT...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCAGAAGGTCTTCAGTATaGAATTCTTGGGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVRRSSV*NSWGKS
Trigger: TGACTTTCCCCAAGAATTTCATACTGAAGACCTTCT...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACACCCATACTTGCGGTTTaGATCCTCTGTTCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETPILAV*ILCSVL
Trigger: CAAAACAGAACAGAGGATTCAAACCGCAAGTATGGG...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCCACCACACCAAATGCTaGGTAAAACCATCATGTAAG +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSHHTKC*VKPSCK
Trigger: CTTACATGATGGTTTTACTCAGCATTTGGTGTGGTG...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCATCTTCTCTACAATTATaGTCCTTTCTATCAGGATTG +
Preference number: 4 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSASSLQL*SFLSGL
Trigger: CAATCCTGATAGAAAGGAGCATAATTGTAGAGAAGA...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATCCCCATCAGGTTCATaGCTACTGAAGTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETSPSGS*LLKSQN
Trigger: ATTCTGTGACTTCAGTAGGCATGAACCTGATGGGGA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGATGTGACCCATAGTTaGAGGAATGGAATCTGTATC +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSDVTHS*RNGICI
Trigger: GATACAGATTCCATTCCTGCAACTATGGGTCACATC...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGGTATCAGGAGGTTCGTaGTTTACATGTAACTCATCA +
Preference number: 4 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQVSGGS*FTCNSS
Trigger: TGATGAGTTACATGTAAAGCACGAACCTCCTGATAC...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCGTATCAGGAGGTTCGTaGTTTACATGTAACTCATCA +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVVSGGS*FTCNSS
Trigger: TGATGAGTTACATGTAAAGCACGAACCTCCTGATAC...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCAGTGTCCATCATACATaGTTTATTGGTAATGTCACC +
Preference number: 4 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSSVHHT*FIGNVT
Trigger: GGTGACATTACCAATAAAGCATGTATGATGGACACT...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGAAGAGGGGTTGCATCTaGACTCATTCCTACAAACTT +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMKRGCI*THSYKL
Trigger: AAGTTTGTAGGAATGAGTGCAGATGCAACCCCTCTT...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCAAGAGGGGTTGCATCTaGACTCATTCCTACAAACTT +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSKRGCI*THSYKL
Trigger: AAGTTTGTAGGAATGAGTGCAGATGCAACCCCTCTT...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACACCTGGATGCTCTCTCTaGTCTTGGTATTCCCTGATA +
Preference number: 4 (lower is better)
Translates to: VSPCLDHFISLTCTSACTPGCSL*SWYSLI
Trigger: TATCAGGGAATACCAAGAGCAGAGAGAGCATCCAGG...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTCTTCTCGTTCGGTTTTaGTCTGCTTACTTCGAACCC +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSLLVRF*SAYFEP
Trigger: GGGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAG...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCACAGTTTCTTGAGCTCTaGTTCTCGTTCGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAQFLEL*FSFGFA
Trigger: AGCAAAACCGAACGAGAAGCAGAGCTCAAGAAACTG...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGAGTTTCAGTTGCTTTTaGTTCGATGGATGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQSFSCF*FDGCFH
Trigger: ATGGAAACATCCATCGAACCAAAAGCAACTGAAACT...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACACCTTGGCTGCTCTTGTaGCCTGTGACAAGGGACGAA +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTPWLLL*PVTRDE
Trigger: TTCGTCCCTTGTCACAGGCCACAAGAGCAGCCAAGG...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGTTCAAACTGTAGACTaGTCTCTGCCTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSVQTVD*SLPSQM
Trigger: CATCTGGGAAGGCAGAGACCAGTCTACAGTTTGAAC...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTTGTCCAGGCAACTCTTaGAATTCACATCTCCCACGT +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSCPGNS*NSHLPR
Trigger: ACGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACA...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACACACAGCTCCCAAGGTTaGTTTACTCTGAGGAATGAA +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETHSSQG*FTLRNE
Trigger: TTCATTCCTCAGAGTAAACCAACCTTGGGAGCTGTG...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCTTCCCTCTTACAACATaGTATTACTGCTTACACTGG +
Preference number: 4 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLFPLTT*YYCLHW
Trigger: CCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAA...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGCTGATTCTTGCTGCATaGCACCACCACAATCTTAGG +
Preference number: 4 (lower is better)
Translates to: SRSLYLFNMHICMYIELWLILAA*HHHNLR
Trigger: CCTAAGATTGTGGTGGTGCCATGCAGCAAGAATCAG...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCATGCTCTCTCTGCTCTTaGTATTCCCTGATAACATGT +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSCSLCS*YSLITC
Trigger: ACATGTTATCAGGGAATACCAAGAGCAGAGAGAGCA...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370586.6
ENST00000613938.4
CDS-3UTR TCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTCAGGTTCATGCCTACTaGAGTCACAGAATTCCACAT +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSQVHAY*SHRIPH
Trigger: ATGTGGAATTCTGTGACTTCAGTAGGCATGAACCTG...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATATCTGACAGAGAGATGTaGCCCATAGTTGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYISDREM*PIVAGM
Trigger: CATTCCTGCAACTATGGGTCACATCTCTCTGTCAGA...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATCTCTATGTGTTTCATaGGCAAGGACAGCTGTATCA +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETSLCVS*ARTAVS
Trigger: TGATACAGCTGTCCTTGCTCATGAAACACATAGAGA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACAAAGCAGAAGGGTTGCTaGAATCTTCAGTGTCATTCC +
Preference number: 4 (lower is better)
Translates to: VSPCLDHFISLTCTSACTKQKGC*NLQCHS
Trigger: GGAATGACACTGAAGATTTCAGCAACCCTTCTGCTT...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACACTTGCTCTTCTGTTTTaGACTCTTCGGCAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETLALLF*TLRQFL
Trigger: TAAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAG...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGAAATTCTATACTCCCTaGGTCATCTTGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMKFYTP*VILLFC
Trigger: ACAGAAGAGCAAGATGACTCAGGGAGTATAGAATTT...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAAAATTCTATACTCCCTaGGTCATCTTGCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSKFYTP*VILLFC
Trigger: ACAGAAGAGCAAGATGACTCAGGGAGTATAGAATTT...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGGAATTCACAATCACTaGGGTCAATATCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSGIHNH*GQYQEL
Trigger: AAGTTCCTGATATTGACCTCAGTGATTGTGAATTCC...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACATGCTCTTGTGGCCTGTaGCAAGGGACGAATCTTCAC +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTCSCGL*QGTNLH
Trigger: GTGAAGATTCGTCCCTTGTCACAGGCCACAAGAGCA...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGATCCCTTTCATTGAGTaGTGTTCAAACTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMIPFIE*CSNCRL
Trigger: CAGTCTACAGTTTGAACATCACTCAATGAAAGGGAT...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAATCCCTTTCATTGAGTaGTGTTCAAACTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSIPFIE*CSNCRL
Trigger: CAGTCTACAGTTTGAACATCACTCAATGAAAGGGAT...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACAAAGGTTGGTTTACTCTaGGGAATGAAGCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: VSPCLDHFISLTCTSACTKVGLL*GMKLVS
Trigger: GGATACCAGCTTCATTCCTCAGAGTAAACCAACCTT...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATATGTCTTAAGGAGTACTaGACCCCTACGAGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYICLKEY*TPTSFR
Trigger: CCTAAAGCTCGTAGGGGTGCAGTACTCCTTAAGACA...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATCCCCATCAGGTTCATaGCTACTGAAGTCACAGAAT +
Preference number: 4 (lower is better)
Translates to: VSPCLDHFISLTCTSACTSPSGS*LLKSQN
Trigger: ATTCTGTGACTTCAGTAGGCATGAACCTGATGGGGA...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACAGATGTGACCCATAGTTaGAGGAATGGAATCTGTATC +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETDVTHS*RNGICI
Trigger: GATACAGATTCCATTCCTGCAACTATGGGTCACATC...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGCAGTTCTTAGTTCGTaGAATGCTTCTGTTGTATCA +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSAVLSS*NASVVS
Trigger: TGATACAACAGAAGCATTGCACGAACTAAGAACTGC...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATTGGAATGGTTTGCTTaGAACTTGAGCCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: VSPCLDHFISLTCTSACTLEWFA*NLSLAD
Trigger: ATCAGCGAGGCTCAAGTTCCAAGCAAACCATTCCAA...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGCAGAATTCCACATTTTaGAATGGTTTGCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQQNSTF*NGLLGT
Trigger: AGTTCCAAGCAAACCATTCCAAAATGTGGAATTCTG...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCGTATCTCCAAAACCTTaGTATCAGTTTCAATTCTGC +
Preference number: 4 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVVSPKP*YQFQFC
Trigger: GCAGAATTGAAACTGATACCAAGGTTTTGGAGATAC...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCAATCAAAGACACCATCTaGACTTCCAGGAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAIKDTI*TSRNRS
Trigger: ACTTCTGTTCCTGGAAGTCCAGATGGTGTCTTTGAT...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGTTCAAACTGTAGACTaGTCTCTGCCTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYIVQTVD*SLPSQM
Trigger: CATCTGGGAAGGCAGAGACCAGTCTACAGTTTGAAC...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACAGAACTTGAGCCTCGCTaGTTTCTAAACAGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTELEPR*FLNRPV
Trigger: CACAGGCCTGTTTAGAAATCAGCGAGGCTCAAGTTC...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATACTCACCATAAATATCTaGGCAAGCAGAAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYILTINI*ASRRVA
Trigger: AGCAACCCTTCTGCTTGCTCAGATATTTATGGTGAG...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGGAGGAAGCACAATCTaGCAAGCTCTCTATCAACTT +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYIGGSTI*QALYQL
Trigger: AAGTTGATAGAGAGCTTGTCAGATTGTGCTTCCTCC...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGCTTGCTCTTCTGTTTTaGACTCTTCGGCAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: SRSLYLFNMHICMYIELWLALLF*TLRQFL
Trigger: TAAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAG...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACAAGAAGGTCTTCAGTATaGAATTCTTGGGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETRRSSV*NSWGKS
Trigger: TGACTTTCCCCAAGAATTTCATACTGAAGACCTTCT...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAAAGGTTGGTTTACTCTaGGGAATGAAGCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYIKVGLL*GMKLVS
Trigger: GGATACCAGCTTCATTCCTCAGAGTAAACCAACCTT...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACACACCACACCAAATGCTaGGTAAAACCATCATGTAAG +
Preference number: 4 (lower is better)
Translates to: VSPCLDHFISLTCTSACTHHTKC*VKPSCK
Trigger: CTTACATGATGGTTTTACTCAGCATTTGGTGTGGTG...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATATTTAGGTACATAAAGTaGCATGTCAGGCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYIFRYIK*HVRPSG
Trigger: GCCAGAAGGCCTGACATGGCACTTTATGTACCTAAA...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACAGCATTTGGGGCTCCCTaGTGTTGTCCTTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTAFGAP*CCPWDN
Trigger: ATTATCCCAAGGACAACAGCAGGGAGCCCCAAATGC...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCAGTAACTCATCAGCAGTaGTGTCATTCTTCTCACATT +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAVTHQQ*CHSSHI
Trigger: AATGTGAGAAGAATGACAGCACTGCTGATGAGTTAC...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAAGTGTCCATCATACATaGTTTATTGGTAATGTCACC +
Preference number: 4 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSSVHHT*FIGNVT
Trigger: GGTGACATTACCAATAAAGCATGTATGATGGACACT...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCATCAGCTATTCTAACTaGAACTACATAAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSISYSN*NYIRAI
Trigger: GATAGCCCTTATGTAGTTGCAGTTAGAATAGCTGAT...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGATCAGCTATTCTAACTaGAACTACATAAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMISYSN*NYIRAI
Trigger: GATAGCCCTTATGTAGTTGCAGTTAGAATAGCTGAT...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATTCCACATTTTGGAATaGTTTGCTTGGAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETFHILE*FAWNLS
Trigger: GCTCAAGTTCCAAGCAAACCATTCCAAAATGTGGAA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGATCAAAGACACCATCTaGACTTCCAGGAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: SRSLYLFNMHICMYIELWIKDTI*TSRNRS
Trigger: ACTTCTGTTCCTGGAAGTCCAGATGGTGTCTTTGAT...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCAGTTTCAGTTGCTTTTaGTTCGATGGATGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSSFSCF*FDGCFH
Trigger: ATGGAAACATCCATCGAACCAAAAGCAACTGAAACT...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTTGCTCTCTCTGCTCTTaGTATTCCCTGATAACTCTT +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSCSLCS*YSLITL
Trigger: AAGAGTTATCAGGGAATACCAAGAGCAGAGAGAGCA...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
CDS-3UTR CCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACATGTCTTCCCGTTGCTTaGCTTCCAACCGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTCLPVA*LPTAFS
Trigger: AGAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACA...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGAAATCTACGCAAGTTTaGTCAAAGACACCATCTGGA +
Preference number: 4 (lower is better)
Translates to: SRSLYLFNMHICMYIELWKSTQV*SKTPSG
Trigger: TCCAGATGGTGTCTTTGATCAAACTTGCGTAGATTT...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTAGAAGGTCTTCAGTATaGAATTCTTGGGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSRRSSV*NSWGKS
Trigger: TGACTTTCCCCAAGAATTTCATACTGAAGACCTTCT...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTATCCCTTTCATTGAGTaGTGTTCAAACTGTAGACTG +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSIPFIE*CSNCRL
Trigger: CAGTCTACAGTTTGAACATCACTCAATGAAAGGGAT...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATATTACTCTGCTTTGTaGGATACTAAGGAATGGTCT +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETYYSAL*DTKEWS
Trigger: AGACCATTCCTTAGTATCTCACAAAGCAGAGTAATA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCCATCTGATGTTTGCATaGTTTGTTGTACAATTTCAG +
Preference number: 4 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSHLMFA*FVVQFQ
Trigger: CTGAAATTGTACAACAAAGCATGCAAACATCAGATG...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACAGCAGTTCTTAGTTCGTaGAATGCTTCTGTTGTATCA +
Preference number: 4 (lower is better)
Translates to: VSPCLDHFISLTCTSACTAVLSS*NASVVS
Trigger: TGATACAACAGAAGCATTGCACGAACTAAGAACTGC...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATACTCCCTGAGTCATCTTaGTCTTCTGTTTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYILPESS*SSVLNS
Trigger: AGAGTTCAAAACAGAAGAGCAAGATGACTCAGGGAG...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAAACCAGACACTGTTCTaGCTCTTTGTACTAACTGCT +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYINQTLF*LFVLTA
Trigger: AGCAGTTAGTACAAAGAGGCAGAACAGTGTCTGGTT...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTTTCCACATTTTGGAATaGTTTGCTTGGAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSFHILE*FAWNLS
Trigger: GCTCAAGTTCCAAGCAAACCATTCCAAAATGTGGAA...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATATGCTCTCTCTGCTCTTaGTATTCCCTGATAACTCTT +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYICSLCS*YSLITL
Trigger: AAGAGTTATCAGGGAATACCAAGAGCAGAGAGAGCA...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
CDS-3UTR TCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATACCTTTCTATCAGGATTaGTATTTAGTCTTCGAGCCT +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYIPFYQD*YLVFEP
Trigger: AGGCTCGAAGACTAAATATCAATCCTGATAGAAAGG...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACACAGGTTCATGCCTACTaGAGTCACAGAATTCCACAT +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTQVHAY*SHRIPH
Trigger: ATGTGGAATTCTGTGACTTCAGTAGGCATGAACCTG...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAAAATCTACGCAAGTTTaGTCAAAGACACCATCTGGA +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYIKSTQV*SKTPSG
Trigger: TCCAGATGGTGTCTTTGATCAAACTTGCGTAGATTT...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAAGAAGGTCTTCAGTATaGAATTCTTGGGGAAAGTCA +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYIRRSSV*NSWGKS
Trigger: TGACTTTCCCCAAGAATTTCATACTGAAGACCTTCT...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGTATTACTCTGCTTTGTaGGATACTAAGGAATGGTCT +
Preference number: 4 (lower is better)
Translates to: SRSLYLFNMHICMYIELWYYSAL*DTKEWS
Trigger: AGACCATTCCTTAGTATCTCACAAAGCAGAGTAATA...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR TCA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATATTACTCTGCTTTGTaGGATACTAAGGAATGGTCT +
Preference number: 4 (lower is better)
Translates to: VSPCLDHFISLTCTSACTYYSAL*DTKEWS
Trigger: AGACCATTCCTTAGTATCTCACAAAGCAGAGTAATA...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATCTTCTCTACAATTATaGTCCTTTCTATCAGGATTG +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETSSLQL*SFLSGL
Trigger: CAATCCTGATAGAAAGGAGCATAATTGTAGAGAAGA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACACATCTGATGTTTGCATaGTTTGTTGTACAATTTCAG +
Preference number: 4 (lower is better)
Translates to: LHVHRALEGSSYLKAMETHLMFA*FVVQFQ
Trigger: CTGAAATTGTACAACAAAGCATGCAAACATCAGATG...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCACATCTGATGTTTGCATaGTTTGTTGTACAATTTCAG +
Preference number: 4 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAHLMFA*FVVQFQ
Trigger: CTGAAATTGTACAACAAAGCATGCAAACATCAGATG...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTATCAGCTATTCTAACTaGAACTACATAAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSISYSN*NYIRAI
Trigger: GATAGCCCTTATGTAGTTGCAGTTAGAATAGCTGAT...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACATTGGAATGGTTTGCTTaGAACTTGAGCCTCGCTGAT +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTLEWFA*NLSLAD
Trigger: ATCAGCGAGGCTCAAGTTCCAAGCAAACCATTCCAA...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR TCA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATATATTACTCTGCTTTGTaGGATACTAAGGAATGGTCT +
Preference number: 4 (lower is better)
Translates to: QSLSRSLYLFNMHICMYIYYSAL*DTKEWS
Trigger: AGACCATTCCTTAGTATCTCACAAAGCAGAGTAATA...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR GCA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTTCTTCTCTACAATTATaGTCCTTTCTATCAGGATTG +
Preference number: 4 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSSSLQL*SFLSGL
Trigger: CAATCCTGATAGAAAGGAGCATAATTGTAGAGAAGA...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACAAACCAGACACTGTTCTaGCTCTTTGTACTAACTGCT +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTNQTLF*LFVLTA
Trigger: AGCAGTTAGTACAAAGAGGCAGAACAGTGTCTGGTT...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACAATCAGCTATTCTAACTaGAACTACATAAGGGCTATC +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTISYSN*NYIRAI
Trigger: GATAGCCCTTATGTAGTTGCAGTTAGAATAGCTGAT...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACATCTTCTCTACAATTATaGTCCTTTCTATCAGGATTG +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTSSLQL*SFLSGL
Trigger: CAATCCTGATAGAAAGGAGCATAATTGTAGAGAAGA...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR GCA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACACATCTGATGTTTGCATaGTTTGTTGTACAATTTCAG +
Preference number: 4 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTHLMFA*FVVQFQ
Trigger: CTGAAATTGTACAACAAAGCATGCAAACATCAGATG...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCAGTCTCGGCGCGCTGTaGCTCTCCGCTTCCGCCGTC +
Preference number: 5 (lower is better)
Translates to: CSAAGAVPGTELSINFGVSLGAL*LSASAV
Trigger: GACGGCGGAAGCGGAGAGCAACAGCGCGCCGAGACT...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298999.8
CDS CCA 90 bp AGGAAAACAGCAATGCAGCAGGTGCAGGCTTCAATAGTAGGACACTaGAAGTCTCGGCGCGCTGTTGCTCTCCGCTTCCGCCGTCTCCGC +
Preference number: 5 (lower is better)
Translates to: RKTAMQQVQASIVGH*KSRRAVALRFRRLR
Trigger: GCGGAGACGGCGGAAGCGGAGAGCAACAGCGCGCCGAGACTTCCAGTGTCCTACTATTGAAGCCTGCACCTGCTGCATTGCTGTTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298999.8
CDS-3UTR CAA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCCTCACCGGCGCGCTGTaGCTCTCCGCTTCCGCCGTC +
Preference number: 5 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSLTGAL*LSASAV
Trigger: GACGGCGGAAGCGGAGAGCAACAGCGCGCCGGTGAG...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370584.7
CDS-3UTR CAA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCTGGCCTTGGCTGCTCTaGTGGCCTGTGACAAGGGAC +
Preference number: 5 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSWPWLL*WPVTRD
Trigger: GTCCCTTGTCACAGGCCACAAGAGCAGCCAAGGCCA...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGGCCTTGGCTGCTCTaGTGGCCTGTGACAAGGGAC +
Preference number: 5 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQWPWLL*WPVTRD
Trigger: GTCCCTTGTCACAGGCCACAAGAGCAGCCAAGGCCA...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCTGTAGTTCACCAACTTaGCAGTTCTGGAACCGGCAG +
Preference number: 5 (lower is better)
Translates to: CSAAGAVPGTELSINFGVCSSPT*QFWNRQ
Trigger: CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACA...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCCTACATGAAGAGGGGTaGCATCTGCACTCATTCCTA +
Preference number: 5 (lower is better)
Translates to: CSAAGAVPGTELSINFGVLHEEG*HLHSFL
Trigger: TAGGAATGAGTGCAGATGCAACCCCTCTTCATGTAG...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCGAGCAAGCAGAAGGGTaGCTGAAATCTTCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: CSAAGAVPGTELSINFGVEQAEG*LKSSVS
Trigger: TGACACTGAAGATTTCAGCAACCCTTCTGCTTGCTC...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGCGTGCAATGCTTCTGTaGTATCACCAGTACTACCCA +
Preference number: 5 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQRAMLL*YHQYYP
Trigger: TGGGTAGTACTGGTGATACAACAGAAGCATTGCACG...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATTGGCCTTGGCTGCTCTaGTGGCCTGTGACAAGGGAC +
Preference number: 5 (lower is better)
Translates to: TTPYSASSITLLCEILRNWPWLL*WPVTRD
Trigger: GTCCCTTGTCACAGGCCACAAGAGCAGCCAAGGCCA...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGCTGTCCAGGCAACTCTaGGAATTCACATCTCCCACG +
Preference number: 5 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLLSRQL*EFTSPT
Trigger: CGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACAG...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCATGGCCTTGGCTGCTCTaGTGGCCTGTGACAAGGGAC +
Preference number: 5 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSWPWLL*WPVTRD
Trigger: GTCCCTTGTCACAGGCCACAAGAGCAGCCAAGGCCA...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTGGCCTTGGCTGCTCTaGTGGCCTGTGACAAGGGAC +
Preference number: 5 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMWPWLL*WPVTRD
Trigger: GTCCCTTGTCACAGGCCACAAGAGCAGCCAAGGCCA...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGGCTTCTCGTTCGGTTTaGCTCTGCTTACTTCGAACC +
Preference number: 5 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLASRSV*LCLLRT
Trigger: GGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAGC...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAGTCTCTTGCTCTTCTGTTTaGAACTCTTCGGCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: CSAAGAVPGTELSINFGVSCSSV*NSSAVL
Trigger: AAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAGA...GACTCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATGGCCTTGGCTGCTCTaGTGGCCTGTGACAAGGGAC +
Preference number: 5 (lower is better)
Translates to: LHVHRALEGSSYLKAMETWPWLL*WPVTRD
Trigger: GTCCCTTGTCACAGGCCACAAGAGCAGCCAAGGCCA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGCTTCTCGTTCGGTTTaGCTCTGCTTACTTCGAACC +
Preference number: 5 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAASRSV*LCLLRT
Trigger: GGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAGC...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTAATGTCTTCCCGTTGCTaGGCTTCCAACCGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVMSSRC*ASNRFL
Trigger: GAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACAT...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTACTACGCCCACCACAGTCCCATACTTGCGGTTaGAATCCTCTGTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SHLPRFFLADGSLLRPPQSHTCG*NPLFCF
Trigger: AAAACAGAACAGAGGATTCAAACCGCAAGTATGGGA...CTGTGGTGGGCGTAGTAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCAGGCAGGCAGACCACTaGAGCTCAGGATTTCGACAC +
Preference number: 5 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSRQADH*SSGFRH
Trigger: GTGTCGAAATCCTGAGCTCAAGTGGTCTGCCTGCCT...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298999.8
CDS-3UTR CAA 90 bp GGCTGCAGTGCAGCTGGAGCGGTCCCAGGCACTGAGCTCAGTATAAACTTTGGAAGTATCTCCAAAACCTaGGTATCAGTTTCAATTCTG +
Preference number: 5 (lower is better)
Translates to: GCSAAGAVPGTELSINFGSISKT*VSVSIL
Trigger: CAGAATTGAAACTGATACCAAGGTTTTGGAGATACT...TCCAAAGTTTATACTGAGCTCAGTGCCTGGGACCGCTCCAGCTGCACTGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCTTCTCGTTCGGTTTaGCTCTGCTTACTTCGAACC +
Preference number: 5 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYASRSV*LCLLRT
Trigger: GGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAGC...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGATGTCTTCCCGTTGCTaGGCTTCCAACCGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQMSSRC*ASNRFL
Trigger: GAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACAT...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCATGTCTTCCCGTTGCTaGGCTTCCAACCGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLMSSRC*ASNRFL
Trigger: GAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACAT...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATTGTAGTTCACCAACTTaGCAGTTCTGGAACCGGCAG +
Preference number: 5 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYCSSPT*QFWNRQ
Trigger: CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACA...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTATGTAGTTCACCAACTTaGCAGTTCTGGAACCGGCAG +
Preference number: 5 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVCSSPT*QFWNRQ
Trigger: CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACA...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS GCA 90 bp TTGGTATTCCCTGATAACTTTGAGCAGTGGTTCTCGGGCTTTATGTaGATCAGAATCCCCTCTTGTAGAAGACGTGGATCCAGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LVFPDNFEQWFSGFM*IRIPSCRRRGSRQS
Trigger: TGACTGCCTGGATCCACGTCTTCTACAAGAGGGGATTCTGATGCACATAAAGCCCGAGAACCACTGCTCAAAGTTATCAGGGAATACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612478.4
CDS CCA 90 bp ACTCTCAACTTCAAAATCTACGCAAGTTTGATCAAAGACACCATCTaGACTTCCAGGAACAGAAGTAGTGGTGATGCCTCCGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TLNFKIYASLIKDTI*TSRNRSSGDASAAG
Trigger: CCCAGCAGCGGAGGCATCACCACTACTTCTGTTCCTGGAAGTCCAGATGGTGTCTTTGATCAAACTTGCGTAGATTTTGAAGTTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCAAGGCAGGCAGACCACTaGAGCTCAGGATTTCGACAC +
Preference number: 5 (lower is better)
Translates to: YPVSPCLDHFISLTCTSARQADH*SSGFRH
Trigger: GTGTCGAAATCCTGAGCTCAAGTGGTCTGCCTGCCT...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298999.8
ENST00000370586.6
CDS-3UTR CAA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGTGGGATAATACTTCTTaGGATTCAGTGGTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLWDNTS*DSVVPL
Trigger: GAGAGGAACCACTGAATCCAAAGAAGTATTATCCCA...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CAGACACTGTTCTGCCTCTTTGTACTAACTGCTCTCCAACCACCCCCTACTCTGATGAAACCTGTACTATaGGCTATACCACCTACACTC +
Preference number: 5 (lower is better)
Translates to: QTLFCLFVLTALQPPPTLMKPVL*AIPPTL
Trigger: GAGTGTAGGTGGTATAGCCAATAGTACAGGTTTCAT...CAGAGTAGGGGGTGGTTGGAGAGCAGTTAGTACAAAGAGGCAGAACAGTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCGAGCAAGCAGAAGGGTaGCTGAAATCTTCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSEQAEG*LKSSVS
Trigger: TGACACTGAAGATTTCAGCAACCCTTCTGCTTGCTC...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGGAGCAAGCAGAAGGGTaGCTGAAATCTTCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQEQAEG*LKSSVS
Trigger: TGACACTGAAGATTTCAGCAACCCTTCTGCTTGCTC...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGCTGTCCAGGCAACTCTaGGAATTCACATCTCCCACG +
Preference number: 5 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMLSRQL*EFTSPT
Trigger: CGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACAG...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCACTGTCCAGGCAACTCTaGGAATTCACATCTCCCACG +
Preference number: 5 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSLSRQL*EFTSPT
Trigger: CGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACAG...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS GCA 90 bp CTCTGCAAAGGTGCATTAGTTATAACCCCAGCATTTGGGGCTCCCTaGTGTTGTCCTTGGGATAATACTTCTTTGGATTCAGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: LCKGALVITPAFGAP*CCPWDNTSLDSVVP
Trigger: AGGAACCACTGAATCCAAAGAAGTATTATCCCAAGGACAACAGCAGGGAGCCCCAAATGCTGGGGTTATAACTAATGCACCTTTGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS CCA 90 bp TGGATGCTCTCTCTGCTCTTGGTATTCCCTGATAACTTTGAGCAGTaGTTCTCGGGCTTTATGTGCATCAGAATCCCCTCTTGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: WMLSLLLVFPDNFEQ*FSGFMCIRIPSCRR
Trigger: TCTTCTACAAGAGGGGATTCTGATGCACATAAAGCCCGAGAACCACTGCTCAAAGTTATCAGGGAATACCAAGAGCAGAGAGAGCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612478.4
CDS-3UTR CAA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCGTGCAATGCTTCTGTaGTATCACCAGTACTACCCA +
Preference number: 5 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVRAMLL*YHQYYP
Trigger: TGGGTAGTACTGGTGATACAACAGAAGCATTGCACG...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCGCTTCTCGTTCGGTTTaGCTCTGCTTACTTCGAACC +
Preference number: 5 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSASRSV*LCLLRT
Trigger: GGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAGC...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGCTTCTCGTTCGGTTTaGCTCTGCTTACTTCGAACC +
Preference number: 5 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSASRSV*LCLLRT
Trigger: GGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAGC...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCAATGTCTTCCCGTTGCTaGGCTTCCAACCGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAMSSRC*ASNRFL
Trigger: GAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACAT...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCATACCCAGTCAGTCCTaGTCTCGATCACTTTATCTC +
Preference number: 5 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSIPSQS*SRSLYL
Trigger: GAGATAAAGTGATCGAGACAAGGACTGACTGGGTAT...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATATACCCAGTCAGTCCTaGTCTCGATCACTTTATCTC +
Preference number: 5 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYIPSQS*SRSLYL
Trigger: GAGATAAAGTGATCGAGACAAGGACTGACTGGGTAT...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTGTAGTTCACCAACTTaGCAGTTCTGGAACCGGCAG +
Preference number: 5 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSCSSPT*QFWNRQ
Trigger: CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACA...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS GCA 90 bp GTTCGTGCAATGCTTCTGTTGTATCACCAGTACTACCCAGGTCAATaGCCACGGCACTGTCTGAAAGAACTTTTGTCCCATTTAACATAC +
Preference number: 5 (lower is better)
Translates to: VRAMLLLYHQYYPGQ*PRHCLKELLSHLTY
Trigger: GTATGTTAAATGGGACAAAAGTTCTTTCAGACAGTGCCGTGGGCATTGACCTGGGTAGTACTGGTGATACAACAGAAGCATTGCACGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS GCA 90 bp TCATCTTGCTCTTCTGTTTTGAACTCTTCGGCAGTTCTTAGTTCGTaGAATGCTTCTGTTGTATCACCAGTACTACCCAGGTCAATGCCC +
Preference number: 5 (lower is better)
Translates to: SSCSSVLNSSAVLSS*NASVVSPVLPRSMP
Trigger: GGGCATTGACCTGGGTAGTACTGGTGATACAACAGAAGCATTGCACGAACTAAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGCCAAGTATGGGATAATACTTCTTaGGATTCAGTGGTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: SPTLQFWNRQCRFCVCQVWDNTS*DSVVPL
Trigger: GAGAGGAACCACTGAATCCAAAGAAGTATTATCCCA...TACTTGGCATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCCTACATGAAGAGGGGTaGCATCTGCACTCATTCCTA +
Preference number: 5 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSLHEEG*HLHSFL
Trigger: TAGGAATGAGTGCAGATGCAACCCCTCTTCATGTAG...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCACGTGCAATGCTTCTGTaGTATCACCAGTACTACCCA +
Preference number: 5 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSRAMLL*YHQYYP
Trigger: TGGGTAGTACTGGTGATACAACAGAAGCATTGCACG...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp ATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAAAGTTTCAGTTGCTTTaGGTTCGATGGATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: IPTSPVVHQLCSSGTGSAKFQLL*VRWMFP
Trigger: TGGAAACATCCATCGAACCAAAAGCAACTGAAACTT...TGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACAGCTTCTCGTTCGGTTTaGCTCTGCTTACTTCGAACC +
Preference number: 5 (lower is better)
Translates to: LHVHRALEGSSYLKAMETASRSV*LCLLRT
Trigger: GGTTCGAAGTAAGCAGAGCAAAACCGAACGAGAAGC...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTATGTCTTCCCGTTGCTaGGCTTCCAACCGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSMSSRC*ASNRFL
Trigger: GAGAAAGCGGTTGGAAGCCAAGCAACGGGAAGACAT...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCATACCCAGTCAGTCCTaGTCTCGATCACTTTATCTC +
Preference number: 5 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVIPSQS*SRSLYL
Trigger: GAGATAAAGTGATCGAGACAAGGACTGACTGGGTAT...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGCTGTCCAGGCAACTCTaGGAATTCACATCTCCCACG +
Preference number: 5 (lower is better)
Translates to: SRSLYLFNMHICMYIELWLSRQL*EFTSPT
Trigger: CGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACAG...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCTCCCATACTTGCGGTTaGAATCCTCTGTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSSHTCG*NPLFCF
Trigger: AAAACAGAACAGAGGATTCAAACCGCAAGTATGGGA...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS CCA 90 bp GCATTAGTTATAACCCCAGCATTTGGGGCTCCCTGCTGTTGTCCTTaGGATAATACTTCTTTGGATTCAGTGGTTCCTCTCTTAGAACAA +
Preference number: 5 (lower is better)
Translates to: ALVITPAFGAPCCCP*DNTSLDSVVPLLEQ
Trigger: TTGTTCTAAGAGAGGAACCACTGAATCCAAAGAAGTATTATCCCAAGGACAACAGCAGGGAGCCCCAAATGCTGGGGTTATAACTAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATCTTCGAGCCTCCGGTTaGTCTTTAAAGACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: TTPYSASSITLLCEILRNLRASG*SLKTSF
Trigger: AAAAGAAGTCTTTAAAGACAAACCGGAGGCTCGAAG...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATTCCTTTCTATCAGGATaGATATTTAGTCTTCGAGCC +
Preference number: 5 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYSFLSG*IFSLRA
Trigger: GGCTCGAAGACTAAATATCAATCCTGATAGAAAGGA...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCTCCTTTCTATCAGGATaGATATTTAGTCTTCGAGCC +
Preference number: 5 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSSFLSG*IFSLRA
Trigger: GGCTCGAAGACTAAATATCAATCCTGATAGAAAGGA...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp GGCAACTCTTGGAATTCACATCTCCCACGTTTCTTCCTAGCTGATGGCTCCCTAAGTATCTCCAAAACCTaGGTATCAGTTTCAATTCTG +
Preference number: 5 (lower is better)
Translates to: GNSWNSHLPRFFLADGSLSISKT*VSVSIL
Trigger: CAGAATTGAAACTGATACCAAGGTTTTGGAGATACT...TAGGGAGCCATCAGCTAGGAAGAAACGTGGGAGATGTGAATTCCAAGAGTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCCAAAATCTACGCAAGTTaGATCAAAGACACCATCTGG +
Preference number: 5 (lower is better)
Translates to: LHLGVKTGVCLPSIPSQSKIYAS*IKDTIW
Trigger: CCAGATGGTGTCTTTGATCAAACTTGCGTAGATTTT...GGACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGAAAATCTACGCAAGTTaGATCAAAGACACCATCTGG +
Preference number: 5 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQKIYAS*IKDTIW
Trigger: CCAGATGGTGTCTTTGATCAAACTTGCGTAGATTTT...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGATGAAACCTGTACTATaGGCTATACCACCTACACTC +
Preference number: 5 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQMKPVL*AIPPTL
Trigger: GAGTGTAGGTGGTATAGCCAATAGTACAGGTTTCAT...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACACTACATGAAGAGGGGTaGCATCTGCACTCATTCCTA +
Preference number: 5 (lower is better)
Translates to: LHVHRALEGSSYLKAMETLHEEG*HLHSFL
Trigger: TAGGAATGAGTGCAGATGCAACCCCTCTTCATGTAG...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCACGTGCAATGCTTCTGTaGTATCACCAGTACTACCCA +
Preference number: 5 (lower is better)
Translates to: YPVSPCLDHFISLTCTSARAMLL*YHQYYP
Trigger: TGGGTAGTACTGGTGATACAACAGAAGCATTGCACG...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATACTGTCCAGGCAACTCTaGGAATTCACATCTCCCACG +
Preference number: 5 (lower is better)
Translates to: QSLSRSLYLFNMHICMYILSRQL*EFTSPT
Trigger: CGTGGGAGATGTGAATTCCAAGAGTTGCCTGGACAG...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGTCCCATACTTGCGGTTaGAATCCTCTGTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQSHTCG*NPLFCF
Trigger: AAAACAGAACAGAGGATTCAAACCGCAAGTATGGGA...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATTCCCATACTTGCGGTTaGAATCCTCTGTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: TTPYSASSITLLCEILRNSHTCG*NPLFCF
Trigger: AAAACAGAACAGAGGATTCAAACCGCAAGTATGGGA...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATGTAGTTCACCAACTTaGCAGTTCTGGAACCGGCAG +
Preference number: 5 (lower is better)
Translates to: VSPCLDHFISLTCTSACTCSSPT*QFWNRQ
Trigger: CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACA...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS TCA 90 bp GAAGGGTTGCTGAAATCTTCAGTGTCATTCCCACTTCTAGCTACATaGAGAGGGGTTGCATCTGCACTCATTCCTACAAACTTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: EGLLKSSVSFPLLAT*RGVASALIPTNFEK
Trigger: TTTCTCAAAGTTTGTAGGAATGAGTGCAGATGCAACCCCTCTTCATGTAGCTAGAAGTGGGAATGACACTGAAGATTTCAGCAACCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATGAGAGAACTTTCTTTTaGCTTTTCTTTCACCACAGA +
Preference number: 5 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYERTFF*LFFHHR
Trigger: TCTGTGGTGAAAGAAAAGCAAAAAGAAAGTTCTCTC...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCACTTCGAGCCTCCGGTTaGTCTTTAAAGACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSLRASG*SLKTSF
Trigger: AAAAGAAGTCTTTAAAGACAAACCGGAGGCTCGAAG...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGTCCTTTCTATCAGGATaGATATTTAGTCTTCGAGCC +
Preference number: 5 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQSFLSG*IFSLRA
Trigger: GGCTCGAAGACTAAATATCAATCCTGATAGAAAGGA...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTGGGATAATACTTCTTaGGATTCAGTGGTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: PSQSLSRSLYLFNMHICMWDNTS*DSVVPL
Trigger: GAGAGGAACCACTGAATCCAAAGAAGTATTATCCCA...CATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGTGCAGATTCTGTGTATAGTATCTCCAAAACCTaGGTATCAGTTTCAATTCTG +
Preference number: 5 (lower is better)
Translates to: PVVHQLCSSGTGSADSVYSISKT*VSVSIL
Trigger: CAGAATTGAAACTGATACCAAGGTTTTGGAGATACT...ATACACAGAATCTGCACTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGAAAATCTACGCAAGTTaGATCAAAGACACCATCTGG +
Preference number: 5 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQKIYAS*IKDTIW
Trigger: CCAGATGGTGTCTTTGATCAAACTTGCGTAGATTTT...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGAGCAAGCAGAAGGGTaGCTGAAATCTTCAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSEQAEG*LKSSVS
Trigger: TGACACTGAAGATTTCAGCAACCCTTCTGCTTGCTC...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCTTGCTCTTCTGTTTaGAACTCTTCGGCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSSCSSV*NSSAVL
Trigger: AAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAGA...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCTCAAGTTTCAGTTGCTTTaGGTTCGATGGATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: CSLLQHGITAYTGTGTQLKFQLL*VRWMFP
Trigger: TGGAAACATCCATCGAACCAAAAGCAACTGAAACTT...GAGCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp ACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAGTCAAGTTTCAGTTGCTTTaGGTTCGATGGATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: TAFRSEDRSLSSFYTQSVKFQLL*VRWMFP
Trigger: TGGAAACATCCATCGAACCAAAAGCAACTGAAACTT...GACTGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTAAATACCCACATCTCCTGTAGTTCACCAACTTTGCAGTTCTGGAACCGGCAGATCAAATCCTTTCTTTaGATAACTGCAGAAAACCCG +
Preference number: 5 (lower is better)
Translates to: LNTHISCSSPTLQFWNRQIKSFL*ITAENP
Trigger: CGGGTTTTCTGCAGTTATCAAAAGAAAGGATTTGAT...CTGCCGGTTCCAGAACTGCAAAGTTGGTGAACTACAGGAGATGTGGGTATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCAATACCCAGTCAGTCCTaGTCTCGATCACTTTATCTC +
Preference number: 5 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAIPSQS*SRSLYL
Trigger: GAGATAAAGTGATCGAGACAAGGACTGACTGGGTAT...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp AATGTTCCCTCTTACAACATGGTATTACTGCTTACACTGGAACTGGCACACAGCCTAAATCTCCCATACTaGCGGTTTGAATCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: NVPSYNMVLLLTLELAHSLNLPY*RFESSV
Trigger: AACAGAGGATTCAAACCGCAAGTATGGGAGATTTAG...GCTGTGTGCCAGTTCCAGTGTAAGCAGTAATACCATGTTGTAAGAGGGAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCACTAAATCTCCCATACTaGCGGTTTGAATCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSLNLPY*RFESSV
Trigger: AACAGAGGATTCAAACCGCAAGTATGGGAGATTTAG...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGTATTCCCTGATAACTTaGAGCAGTGGTTCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: SRSLYLFNMHICMYIELWYSLIT*SSGSRA
Trigger: AGCCCGAGAACCACTGCTCAAAGTTATCAGGGAATA...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612478.4
CDS CCA 90 bp TCCTGTCACATCCGTAGTTTCAACTTCCAAACACTCCACCTTCTTTaGTTTAAAATGTCTCTGCAAAGGTGCATTAGTTATAACCCCAGC +
Preference number: 5 (lower is better)
Translates to: SCHIRSFNFQTLHLL*FKMSLQRCISYNPS
Trigger: GCTGGGGTTATAACTAATGCACCTTTGCAGAGACATTTTAAACCAAAGAAGGTGGAGTGTTTGGAAGTTGAAACTACGGATGTGACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATGGGATAATACTTCTTaGGATTCAGTGGTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: LHVHRALEGSSYLKAMETWDNTS*DSVVPL
Trigger: GAGAGGAACCACTGAATCCAAAGAAGTATTATCCCA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TGCTTTAAATATCTTGGAAGTGTGACCCACGCTAACATGACTTGCCCTGTCCAGAGTATCTCCAAAACCTaGGTATCAGTTTCAATTCTG +
Preference number: 5 (lower is better)
Translates to: CFKYLGSVTHANMTCPVQSISKT*VSVSIL
Trigger: CAGAATTGAAACTGATACCAAGGTTTTGGAGATACT...CTGGACAGGGCAAGTCATGTTAGCGTGGGTCACACTTCCAAGATATTTAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACAATGAAACCTGTACTATaGGCTATACCACCTACACTC +
Preference number: 5 (lower is better)
Translates to: LHVHRALEGSSYLKAMETMKPVL*AIPPTL
Trigger: GAGTGTAGGTGGTATAGCCAATAGTACAGGTTTCAT...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTGCATGTACATAGAGCTCTGGAAGGATCATCTTATCTGAAGGCTATGGAAACATCTTGCTCTTCTGTTTaGAACTCTTCGGCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LHVHRALEGSSYLKAMETSCSSV*NSSAVL
Trigger: AAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAGA...TGTTTCCATAGCCTTCAGATAAGATGATCCTTCCAGAGCTCTATGTACATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAAAGTTTCAGTTGCTTTaGGTTCGATGGATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSKFQLL*VRWMFP
Trigger: TGGAAACATCCATCGAACCAAAAGCAACTGAAACTT...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp ACCACCCCCTACTCTGCCTCCAGTATTACTCTGCTTTGTGAGATACTAAGGAATATCAAATCCTTTCTTTaGATAACTGCAGAAAACCCG +
Preference number: 5 (lower is better)
Translates to: TTPYSASSITLLCEILRNIKSFL*ITAENP
Trigger: CGGGTTTTCTGCAGTTATCAAAAGAAAGGATTTGAT...ATTCCTTAGTATCTCACAAAGCAGAGTAATACTGGAGGCAGAGTAGGGGGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTATACCCAGTCAGTCCTaGTCTCGATCACTTTATCTC +
Preference number: 5 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSIPSQS*SRSLYL
Trigger: GAGATAAAGTGATCGAGACAAGGACTGACTGGGTAT...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS TCA 90 bp ACATTCTCTAATCATTACTGGACTAACAGTGTCATTTGTGCTCTCTaGCAGAGAGATGTGACCCATAGTTGCAGGAATGGAATCTGTATC +
Preference number: 5 (lower is better)
Translates to: TFSNHYWTNSVICAL*QRDVTHSCRNGICI
Trigger: GATACAGATTCCATTCCTGCAACTATGGGTCACATCTCTCTGTCAGAGAGCACAAATGACACTGTTAGTCCAGTAATGATTAGAGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAGAGCTCTGGCTTCGAGCCTCCGGTTaGTCTTTAAAGACTTCTTTT +
Preference number: 5 (lower is better)
Translates to: SRSLYLFNMHICMYIELWLRASG*SLKTSF
Trigger: AAAAGAAGTCTTTAAAGACAAACCGGAGGCTCGAAG...CCAGAGCTCTATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp TACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCAAAAATCTACGCAAGTTaGATCAAAGACACCATCTGG +
Preference number: 5 (lower is better)
Translates to: YPVSPCLDHFISLTCTSAKIYAS*IKDTIW
Trigger: CCAGATGGTGTCTTTGATCAAACTTGCGTAGATTTT...TGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CTATACCCAGTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTTCTTGCTCTTCTGTTTaGAACTCTTCGGCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: LYPVSPCLDHFISLTCTSSCSSV*NSSAVL
Trigger: AAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAGA...AGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGACTGGGTATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp AGAACTGCATTTAGGAGTGAAGACAGGAGTCTGTCTTCCTTCTATACCCAGTCAATCAAATCCTTTCTTTaGATAACTGCAGAAAACCCG +
Preference number: 5 (lower is better)
Translates to: RTAFRSEDRSLSSFYTQSIKSFL*ITAENP
Trigger: CGGGTTTTCTGCAGTTATCAAAAGAAAGGATTTGAT...TGACTGGGTATAGAAGGAAGACAGACTCCTGTCTTCACTCCTAAATGCAGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATCCCATACTTGCGGTTaGAATCCTCTGTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: VSPCLDHFISLTCTSACTSHTCG*NPLFCF
Trigger: AAAACAGAACAGAGGATTCAAACCGCAAGTATGGGA...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
ENST00000613938.4
CDS TCA 90 bp GTAATGTCACCTACATTCTTAAATCCACTATCTCTATGTGTTTCATaGGCAAGGACAGCTGTATCAGGAGGTTCGTGCTTTACATGTAAC +
Preference number: 5 (lower is better)
Translates to: VMSPTFLNPLSLCVS*ARTAVSGGSCFTCN
Trigger: GTTACATGTAAAGCACGAACCTCCTGATACAGCTGTCCTTGCTCATGAAACACATAGAGATAGTGGATTTAAGAATGTAGGTGACATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS TCA 90 bp AGCTACATGAAGAGGGGTTGCATCTGCACTCATTCCTACAAACTTTaGGAAACTTCGTGTATTAATAGAGGTCTCATCAGCTATTCTAAC +
Preference number: 5 (lower is better)
Translates to: SYMKRGCICTHSYKL*ETSCINRGLISYSN
Trigger: GTTAGAATAGCTGATGAGACCTCTATTAATACACGAAGTTTCTCAAAGTTTGTAGGAATGAGTGCAGATGCAACCCCTCTTCATGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS GCA 90 bp CTATCAGGAAAAGATACACCAAATTCTATACTCCCTGAGTCATCTTaGTCTTCTGTTTTGAACTCTTCGGCAGTTCTTAGTTCGTGCAAT +
Preference number: 5 (lower is better)
Translates to: LSGKDTPNSILPESS*SSVLNSSAVLSSCN
Trigger: ATTGCACGAACTAAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAGATGACTCAGGGAGTATAGAATTTGGTGTATCTTTTCCTGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACAGAGAGAACTTTCTTTTaGCTTTTCTTTCACCACAGA +
Preference number: 5 (lower is better)
Translates to: VSPCLDHFISLTCTSACTERTFF*LFFHHR
Trigger: TCTGTGGTGAAAGAAAAGCAAAAAGAAAGTTCTCTC...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATATCCTTTCTATCAGGATaGATATTTAGTCTTCGAGCC +
Preference number: 5 (lower is better)
Translates to: QSLSRSLYLFNMHICMYISFLSG*IFSLRA
Trigger: GGCTCGAAGACTAAATATCAATCCTGATAGAAAGGA...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp GTCAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACAATCAAATCCTTTCTTTaGATAACTGCAGAAAACCCG +
Preference number: 5 (lower is better)
Translates to: VSPCLDHFISLTCTSACTIKSFL*ITAENP
Trigger: CGGGTTTTCTGCAGTTATCAAAAGAAAGGATTTGAT...TGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACAATGAAACCTGTACTATaGGCTATACCACCTACACTC +
Preference number: 5 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTMKPVL*AIPPTL
Trigger: GAGTGTAGGTGGTATAGCCAATAGTACAGGTTTCAT...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS-3UTR CAA 90 bp CAGTCCTTGTCTCGATCACTTTATCTCTTTAACATGCACATCTGCATGTACATAATCAAATCCTTTCTTTaGATAACTGCAGAAAACCCG +
Preference number: 5 (lower is better)
Translates to: QSLSRSLYLFNMHICMYIIKSFL*ITAENP
Trigger: CGGGTTTTCTGCAGTTATCAAAAGAAAGGATTTGAT...TATGTACATGCAGATGTGCATGTTAAAGAGATAAAGTGATCGAGACAAGGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4
CDS-3UTR CAA 90 bp TGTCATAAAATGGGCTTTAATGTTCCCTCTTACAACATGGTATTACTGCTTACACTAAATCTCCCATACTaGCGGTTTGAATCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: CHKMGFNVPSYNMVLLLTLNLPY*RFESSV
Trigger: AACAGAGGATTCAAACCGCAAGTATGGGAGATTTAG...TGTAAGCAGTAATACCATGTTGTAAGAGGGAACATTAAAGCCCATTTTATGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS GCA 90 bp AGTTACATGATCACTACAGGACATACCTGTAGTGTCCATCATACATaGTTTATTGGTAATGTCACCTACATTCTTAAATCCACTATCTCT +
Preference number: 5 (lower is better)
Translates to: SYMITTGHTCSVHHT*FIGNVTYILKSTIS
Trigger: AGAGATAGTGGATTTAAGAATGTAGGTGACATTACCAATAAAGCATGTATGATGGACACTACAGGTATGTCCTGTAGTGATCATGTAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS CCA 72 bp GCAATGCAGCAGGTGCAGGCTTCAATAGTAGGACACTaGAAGTCTCGGCGCGCTGTTGCTCTCCGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: AMQQVQASIVGH*KSRRAVALRFR
Trigger: GCGGAAGCGGAGAGCAACAGCGCGCCGAGACTTCCAGTGTCCTACTATTGAAGCCTGCACCTGCTGCATTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298999.8
CDS GCA 72 bp TTCAATAGTAGGACACTGGAAGTCTCGGCGCGCTGTTaGTCTCCGCTTCCGCCGTCTCCGCGAAGCTCTATC +
Preference number: 6 (lower is better)
Translates to: FNSRTLEVSARC*SPLPPSPRSSI
Trigger: GATAGAGCTTCGCGGAGACGGCGGAAGCGGAGAGCAACAGCGCGCCGAGACTTCCAGTGTCCTACTATTGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298999.8
CDS TCA 72 bp CTGTCTCTGAAGGCAAACTGTGTAAAAGTTCCTTTCTaGCAGCAGCCTCACCGGCGCGCTGTTGCTCTCCGC +
Preference number: 6 (lower is better)
Translates to: LSLKANCVKVPF*QQPHRRAVALR
Trigger: GCGGAGAGCAACAGCGCGCCGGTGAGGCTGCTGTCAGAAAGGAACTTTTACACAGTTTGCCTTCAGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370584.7
CDS CAA 72 bp ACTCTTCGGCAGTTCTTAGTTCGTGCAATGCTTCTGTaGTATCACCAGTACTACCCAGGTCAATGCCCACGG +
Preference number: 6 (lower is better)
Translates to: TLRQFLVRAMLL*YHQYYPGQCPR
Trigger: CCGTGGGCATTGACCTGGGTAGTACTGGTGATACAACAGAAGCATTGCACGAACTAAGAACTGCCGAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS GCA 72 bp CCTGATAACTTTGAGCAGTGGTTCTCGGGCTTTATGTaGATCAGAATCCCCTCTTGTAGAAGACGTGGATCC +
Preference number: 6 (lower is better)
Translates to: PDNFEQWFSGFM*IRIPSCRRRGS
Trigger: GGATCCACGTCTTCTACAAGAGGGGATTCTGATGCACATAAAGCCCGAGAACCACTGCTCAAAGTTATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612478.4
CDS GCA 72 bp ATGCTTCTGTTGTATCACCAGTACTACCCAGGTCAATaGCCACGGCACTGTCTGAAAGAACTTTTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: MLLLYHQYYPGQ*PRHCLKELLSH
Trigger: ATGGGACAAAAGTTCTTTCAGACAGTGCCGTGGGCATTGACCTGGGTAGTACTGGTGATACAACAGAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS CAA 72 bp GGATGCTCTCTCTGCTCTTGGTATTCCCTGATAACTTaGAGCAGTGGTTCTCGGGCTTTATGTGCATCAGAA +
Preference number: 6 (lower is better)
Translates to: GCSLCSWYSLIT*SSGSRALCASE
Trigger: TTCTGATGCACATAAAGCCCGAGAACCACTGCTCAAAGTTATCAGGGAATACCAAGAGCAGAGAGAGCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612478.4
CDS CAA 72 bp GGGGCTCCCTGCTGTTGTCCTTGGGATAATACTTCTTaGGATTCAGTGGTTCCTCTCTTAGAACAAACTCTA +
Preference number: 6 (lower is better)
Translates to: GAPCCCPWDNTS*DSVVPLLEQTL
Trigger: TAGAGTTTGTTCTAAGAGAGGAACCACTGAATCCAAAGAAGTATTATCCCAAGGACAACAGCAGGGAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS TCA 72 bp CTGAAATCTTCAGTGTCATTCCCACTTCTAGCTACATaGAGAGGGGTTGCATCTGCACTCATTCCTACAAAC +
Preference number: 6 (lower is better)
Translates to: LKSSVSFPLLAT*RGVASALIPTN
Trigger: GTTTGTAGGAATGAGTGCAGATGCAACCCCTCTTCATGTAGCTAGAAGTGGGAATGACACTGAAGATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS GCA 72 bp TCTTCTGTTTTGAACTCTTCGGCAGTTCTTAGTTCGTaGAATGCTTCTGTTGTATCACCAGTACTACCCAGG +
Preference number: 6 (lower is better)
Translates to: SSVLNSSAVLSS*NASVVSPVLPR
Trigger: CCTGGGTAGTACTGGTGATACAACAGAAGCATTGCACGAACTAAGAACTGCCGAAGAGTTCAAAACAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS CCA 72 bp TTCAAAATCTACGCAAGTTTGATCAAAGACACCATCTaGACTTCCAGGAACAGAAGTAGTGGTGATGCCTCC +
Preference number: 6 (lower is better)
Translates to: FKIYASLIKDTI*TSRNRSSGDAS
Trigger: GGAGGCATCACCACTACTTCTGTTCCTGGAAGTCCAGATGGTGTCTTTGATCAAACTTGCGTAGATTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS CAA 72 bp AGGTTCATGCCTACTGAAGTCACAGAATTCCACATTTaGGAATGGTTTGCTTGGAACTTGAGCCTCGCTGAT +
Preference number: 6 (lower is better)
Translates to: RFMPTEVTEFHI*EWFAWNLSLAD
Trigger: ATCAGCGAGGCTCAAGTTCCAAGCAAACCATTCCAAAATGTGGAATTCTGTGACTTCAGTAGGCATGAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS TCA 72 bp TGTCTTCAAATGCTTCCCCATCAGGTTCATGCCTACTaGAGTCACAGAATTCCACATTTTGGAATGGTTTGC +
Preference number: 6 (lower is better)
Translates to: CLQMLPHQVHAY*SHRIPHFGMVC
Trigger: GCAAACCATTCCAAAATGTGGAATTCTGTGACTTCAGTAGGCATGAACCTGATGGGGAAGCATTTGAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS CAA 90 bp CCAGCATTTGGGGCTCCCTGCTGTTGTCCTTGGGATAATACTTCTTaGGATTCAGTGGTTCCTCTCTTAGAACAAACTCTATTTGTTTTT +
Preference number: 6 (lower is better)
Translates to: PAFGAPCCCPWDNTS*DSVVPLLEQTLFVF
Trigger: AAAAACAAATAGAGTTTGTTCTAAGAGAGGAACCACTGAATCCAAAGAAGTATTATCCCAAGGACAACAGCAGGGAGCCCCAAATGCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS TCA 72 bp CTAACAGTGTCATTTGTGCTCTCTGACAGAGAGATGTaGCCCATAGTTGCAGGAATGGAATCTGTATCTTTT +
Preference number: 6 (lower is better)
Translates to: LTVSFVLSDREM*PIVAGMESVSF
Trigger: AAAAGATACAGATTCCATTCCTGCAACTATGGGTCACATCTCTCTGTCAGAGAGCACAAATGACACTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS TCA 72 bp CCTACATTCTTAAATCCACTATCTCTATGTGTTTCATaGGCAAGGACAGCTGTATCAGGAGGTTCGTGCTTT +
Preference number: 6 (lower is better)
Translates to: PTFLNPLSLCVS*ARTAVSGGSCF
Trigger: AAAGCACGAACCTCCTGATACAGCTGTCCTTGCTCATGAAACACATAGAGATAGTGGATTTAAGAATGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS TCA 72 bp AAGAGGGGTTGCATCTGCACTCATTCCTACAAACTTTaGGAAACTTCGTGTATTAATAGAGGTCTCATCAGC +
Preference number: 6 (lower is better)
Translates to: KRGCICTHSYKL*ETSCINRGLIS
Trigger: GCTGATGAGACCTCTATTAATACACGAAGTTTCTCAAAGTTTGTAGGAATGAGTGCAGATGCAACCCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS TCA 72 bp CCTATCAGGAAAAGATACACCAAATTCTATACTCCCTaGGTCATCTTGCTCTTCTGTTTTGAACTCTTCGGC +
Preference number: 6 (lower is better)
Translates to: PIRKRYTKFYTP*VILLFCFELFG
Trigger: GCCGAAGAGTTCAAAACAGAAGAGCAAGATGACTCAGGGAGTATAGAATTTGGTGTATCTTTTCCTGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS GCA 72 bp AAAGATACACCAAATTCTATACTCCCTGAGTCATCTTaGTCTTCTGTTTTGAACTCTTCGGCAGTTCTTAGT +
Preference number: 6 (lower is better)
Translates to: KDTPNSILPESS*SSVLNSSAVLS
Trigger: ACTAAGAACTGCCGAAGAGTTCAAAACAGAAGAGCAAGATGACTCAGGGAGTATAGAATTTGGTGTATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS CAA 72 bp CTATCAGGATTGATATTTAGTCTTCGAGCCTCCGGTTaGTCTTTAAAGACTTCTTTTTGGGAGAGAGAACTT +
Preference number: 6 (lower is better)
Translates to: LSGLIFSLRASG*SLKTSFWEREL
Trigger: AAGTTCTCTCTCCCAAAAAGAAGTCTTTAAAGACAAACCGGAGGCTCGAAGACTAAATATCAATCCTGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS TCA 72 bp TTGCAGGAATGGAATCTGTATCTTTTTGATCTAAGATaGAACCTGTACTATTGGCTATACCACCTACACTCT +
Preference number: 6 (lower is better)
Translates to: LQEWNLYLFDLR*NLYYWLYHLHS
Trigger: AGAGTGTAGGTGGTATAGCCAATAGTACAGGTTTCATCTTAGATCAAAAAGATACAGATTCCATTCCTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS GCA 72 bp TCGTGTATTAATAGAGGTCTCATCAGCTATTCTAACTaGAACTACATAAGGGCTATCAACAGTTACATGATC +
Preference number: 6 (lower is better)
Translates to: SCINRGLISYSN*NYIRAINSYMI
Trigger: GATCATGTAACTGTTGATAGCCCTTATGTAGTTGCAGTTAGAATAGCTGATGAGACCTCTATTAATACACGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS CCA 72 bp ATCCGTAGTTTCAACTTCCAAACACTCCACCTTCTTTaGTTTAAAATGTCTCTGCAAAGGTGCATTAGTTAT +
Preference number: 6 (lower is better)
Translates to: IRSFNFQTLHLL*FKMSLQRCISY
Trigger: ATAACTAATGCACCTTTGCAGAGACATTTTAAACCAAAGAAGGTGGAGTGTTTGGAAGTTGAAACTACGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS CAA 72 bp CAGGACATACCTGTAGTGTCCATCATACATGCTTTATaGGTAATGTCACCTACATTCTTAAATCCACTATCT +
Preference number: 6 (lower is better)
Translates to: QDIPVVSIIHAL*VMSPTFLNPLS
Trigger: AGATAGTGGATTTAAGAATGTAGGTGACATTACCAATAAAGCATGTATGATGGACACTACAGGTATGTCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000612478.4
CDS CCA 72 bp AAATTCTTGGGGAAAGTCATAAATTTCAATGACATGTaGGAATTCACAATCACTGAGGTCAATATCAGGAAC +
Preference number: 6 (lower is better)
Translates to: KFLGKVINFNDM*EFTITEVNIRN
Trigger: GTTCCTGATATTGACCTCAGTGATTGTGAATTCCCACATGTCATTGAAATTTATGACTTTCCCCAAGAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298999.8
ENST00000314594.6
ENST00000370584.7
ENST00000370586.6
ENST00000612478.4
ENST00000613938.4