RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for R3HCC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104679

Ensembl transcript IDs: ENST00000265806.12, ENST00000411463.2, ENST00000517633.6, ENST00000518840.6, ENST00000519952.6, ENST00000520480.5, ENST00000521588.4, ENST00000522012.6, ENST00000523720.1, ENST00000625275.3

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGCCCGGGCCACCAGCCGCCGGGCCACAGTCGCATTTGTCTGTaGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAGGC +
Preference number: 1 (lower is better)
Translates to: QGPGHQPPGHSRICL*PLLHQTQEFWPLQG
Trigger: GCCTTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCTGGTGGCCCGGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR TCA 90 bp CCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTGTaGAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGA +
Preference number: 1 (lower is better)
Translates to: PMVKLEGGAGLLWRL*RLMVLGAPATSGRR
Trigger: TCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
3UTR CCA 90 bp GGGACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTaGTGCGGGGCTGCTCTGGCGTCTGTGAAGGCTTATGGTGTTGGG +
Preference number: 1 (lower is better)
Translates to: GTKLKPTTPHGEARG*CGAALASVKAYGVG
Trigger: CCCAACACCATAAGCCTTCACAGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
3UTR TCA 90 bp CTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAGGCTTTGAGCTTTaGCTGCTTGGTTCCCTGTGTGAGGGGCCGGATCTTGAGCACCGA +
Preference number: 1 (lower is better)
Translates to: LHQTQEFWPLQGFEL*LLGSLCEGPDLEHR
Trigger: TCGGTGCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR GCA 90 bp ACCAGACGCAGGAGTTTTGGCCTCTGCAAGGCTTTGAGCTTTGACTaGTTGGTTCCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAAC +
Preference number: 1 (lower is better)
Translates to: TRRRSFGLCKALSFD*LVPCVRGRILSTEN
Trigger: GTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGCCAAAACTCCTGCGTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR CCA 90 bp CCTACGGACAGGATATTTATTGTTCCAAGAAACCCTGGACCATGTTaGCTACGTAACCACCCACGAGAGCACAGCTGGCCTCGGCAGGCC +
Preference number: 1 (lower is better)
Translates to: PTDRIFIVPRNPGPC*LRNHPREHSWPRQA
Trigger: GGCCTGCCGAGGCCAGCTGTGCTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATATCCTGTCCGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
3UTR TCA 90 bp CCTTCTCTTGGAACTCAGAAAACGTTGCCAGCAGGTCCTCCGTCTTaGGCGCTGGTTCAAAGTCATAGATCTCTACCACGTGGGCAAGGT +
Preference number: 1 (lower is better)
Translates to: PSLGTQKTLPAGPPS*ALVQSHRSLPRGQG
Trigger: ACCTTGCCCACGTGGTAGAGATCTATGACTTTGAACCAGCGCTCAAGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTCCAAGAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR TCA 90 bp AGGGAAAGATGCCGAGTGCGTGAGTATCATCCACCCACTGAATCCTaGACCCCTTCTCTTGGAACTCAGAAAACGTTGCCAGCAGGTCCT +
Preference number: 1 (lower is better)
Translates to: RERCRVREYHPPTES*TPSLGTQKTLPAGP
Trigger: AGGACCTGCTGGCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAGGATTCAGTGGGTGGATGATACTCACGCACTCGGCATCTTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR CCA 90 bp TTGGAACTCAGAAAACGTTGCCAGCAGGTCCTCCGTCTTGAGCGCTaGTTCAAAGTCATAGATCTCTACCACGTGGGCAAGGTCCTTCTC +
Preference number: 1 (lower is better)
Translates to: LELRKRCQQVLRLER*FKVIDLYHVGKVLL
Trigger: GAGAAGGACCTTGCCCACGTGGTAGAGATCTATGACTTTGAACCAGCGCTCAAGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR GCA 90 bp CACCCACTGAATCCTGAACCCCTTCTCTTGGAACTCAGAAAACGTTaGCAGCAGGTCCTCCGTCTTGAGCGCTGGTTCAAAGTCATAGAT +
Preference number: 1 (lower is better)
Translates to: HPLNPEPLLLELRKR*QQVLRLERWFKVID
Trigger: ATCTATGACTTTGAACCAGCGCTCAAGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAGGATTCAGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR TCA 90 bp AGCTCCTCCACGAAGGAGGATGTGTCCAAATGGATCTTCTCTATCTaGATCTCCTTCTTCGTCAGGTTGTCTGTGATCTCCTGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: SSSTKEDVSKWIFSI*ISFFVRLSVISCSS
Trigger: GCTGCTGCAGGAGATCACAGACAACCTGACGAAGAAGGAGATTCAGATAGAGAAGATCCATTTGGACACATCCTCCTTCGTGGAGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR-3UTR GCA 90 bp CGGGCCACCAGCCGCCGGGCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCCGTCCTCCGAGCAGCTaGTGGGGCCATCCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: RATSRRATVAFVCGLSFTRPPSS*WGHPLP
Trigger: TGGAAGAGGATGGCCCCAGCAGCTGCTCGGAGGACG...GGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCTGGTGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR-3UTR TCA 90 bp GTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTGTATCATCCACCCACTaGATCCTGAACCCCTTCTCT +
Preference number: 2 (lower is better)
Translates to: VGSPGLRAAADPGQQAALVSSTH*ILNPFS
Trigger: AGAGAAGGGGTTCAGGATTCAGTGGGTGGATGATAC...AAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR CAA 90 bp GCTTTGAGCTTTGACTGCTTGGTTCCCTGTGTGAGGGGCCGGATCTaGAGCACCGAGAACTCCCGGGTCAGGGCTTCCGCAGCTGAGGCC +
Preference number: 2 (lower is better)
Translates to: ALSFDCLVPCVRGRI*STENSRVRASAAEA
Trigger: GGCCTCAGCTGCGGAAGCCCTGACCCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAGTCAAAGCTCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR-3UTR CCA 90 bp TGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCCTGAACCCCTTCTCTTaGAACTCAGAAAACGTTGCC +
Preference number: 2 (lower is better)
Translates to: WVSRPQGGSGPRTAGRSFLNPFS*NSENVA
Trigger: GGCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAG...GAAAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR-3UTR CCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTGAAGGCTTATGGTGTTaGGGGCGCCAGCTACGTCGG +
Preference number: 2 (lower is better)
Translates to: KLKPTTPHGEARGWCGAAEGLWC*GRQLRR
Trigger: CCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTC...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265806.12
3UTR-3UTR GCA 90 bp CAGCCGCCGGGCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGGGAAAGATGCCGAGTaGGTGAGTATCATCCACCCA +
Preference number: 2 (lower is better)
Translates to: QPPGHSRICLWPLLHQTQGKDAE*VSIIHP
Trigger: TGGGTGGATGATACTCACGCACTCGGCATCTTTCCC...CTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR-3UTR CCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTGTCTGTGAAGGCTTATaGTGTTGGGGGCGCCAGCTA +
Preference number: 2 (lower is better)
Translates to: KLKPTTPHGEARGWCGAAVCEGL*CWGRQL
Trigger: TAGCTGGCGCCCCCAACACCATAAGCCTTCACAGAC...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265806.12
3UTR CAA 90 bp AGACGCAGGAGTTTTGGCCTCTGCAAGGCTTTGAGCTTTGACTGCTaGGTTCCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAACTCC +
Preference number: 2 (lower is better)
Translates to: RRRSFGLCKALSFDC*VPCVRGRILSTENS
Trigger: GGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGCCAAAACTCCTGCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR-3UTR CCA 90 bp TCCAGGCAGCTCCTCCACGAAGGAGGATGTGTCCAAATGGATCTTCTCTATCTGCCTCCGAGCAGCTGCTaGGGCCATCCTCTTCCACCT +
Preference number: 2 (lower is better)
Translates to: SRQLLHEGGCVQMDLLYLPPSSC*GHPLPP
Trigger: AGGTGGAAGAGGATGGCCCCAGCAGCTGCTCGGAGG...CAGATAGAGAAGATCCATTTGGACACATCCTCCTTCGTGGAGGAGCTGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR-3UTR TCA 90 bp CTGCTTGGTTCCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAACTCCCGGGTTGGATCTTCTCTATCTaGATCTCCTTCTTCGTCAGG +
Preference number: 2 (lower is better)
Translates to: LLGSLCEGPDLEHRELPGWIFSI*ISFFVR
Trigger: CCTGACGAAGAAGGAGATTCAGATAGAGAAGATCCA...ACCCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR CAA 90 bp GAGTGCGTGAGTATCATCCACCCACTGAATCCTGAACCCCTTCTCTaGGAACTCAGAAAACGTTGCCAGCAGGTCCTCCGTCTTGAGCGC +
Preference number: 2 (lower is better)
Translates to: ECVSIIHPLNPEPLL*ELRKRCQQVLRLER
Trigger: GCGCTCAAGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAGGATTCAGTGGGTGGATGATACTCACGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR-3UTR GCA 90 bp AGGATATTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACCTCGGCAGGCCTCTTaGAGGTCCATTTTACTAGTT +
Preference number: 2 (lower is better)
Translates to: RIFIVPRNPGPCWLRNHPPRQAS*RSILLV
Trigger: AACTAGTAAAATGGACCTGCAAGAGGCCTGCCGAGG...TGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520480.5
3UTR CCA 72 bp CGGGGCTGCTCTGGCGTCTGTGAAGGCTTATGGTGTTaGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGC +
Preference number: 3 (lower is better)
Translates to: RGCSGVCEGLWC*GRQLRRDADPG
Trigger: GCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGACGCCAGAGCAGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
3UTR TCA 72 bp AAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTGTaGAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCG +
Preference number: 3 (lower is better)
Translates to: KLEGGAGLLWRL*RLMVLGAPATS
Trigger: CGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
3UTR CCA 72 bp GGCCACCAGCCGCCGGGCCACAGTCGCATTTGTCTGTaGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCT +
Preference number: 3 (lower is better)
Translates to: GHQPPGHSRICL*PLLHQTQEFWP
Trigger: AGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCTGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR GCA 72 bp AAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTaGGGGGCTGCTCTGGCGTCTGTGAAGGCTTATGGT +
Preference number: 3 (lower is better)
Translates to: KPTTPHGEARGW*GAALASVKAYG
Trigger: ACCATAAGCCTTCACAGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
3UTR-3UTR CAA 90 bp CTGCTTGGTTCCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAACTCCCGGGTTCCTTCTTCGTCAGGTaGTCTGTGATCTCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: LLGSLCEGPDLEHRELPGSFFVR*SVISCS
Trigger: GCTGCAGGAGATCACAGACAACCTGACGAAGAAGGA...ACCCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR-3UTR CAA 90 bp CGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAGGAACTCAGAAAACGTaGCCAGCAGGTCCTCCGTCT +
Preference number: 3 (lower is better)
Translates to: RICLWPLLHQTQEFWPLQGTQKT*PAGPPS
Trigger: AGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTCC...TTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR CCA 72 bp AGAAAACGTTGCCAGCAGGTCCTCCGTCTTGAGCGCTaGTTCAAAGTCATAGATCTCTACCACGTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: RKRCQQVLRLER*FKVIDLYHVGK
Trigger: CTTGCCCACGTGGTAGAGATCTATGACTTTGAACCAGCGCTCAAGACGGAGGACCTGCTGGCAACGTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR TCA 72 bp GGAACTCAGAAAACGTTGCCAGCAGGTCCTCCGTCTTaGGCGCTGGTTCAAAGTCATAGATCTCTACCACGT +
Preference number: 3 (lower is better)
Translates to: GTQKTLPAGPPS*ALVQSHRSLPR
Trigger: ACGTGGTAGAGATCTATGACTTTGAACCAGCGCTCAAGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR GCA 72 bp AATCCTGAACCCCTTCTCTTGGAACTCAGAAAACGTTaGCAGCAGGTCCTCCGTCTTGAGCGCTGGTTCAAA +
Preference number: 3 (lower is better)
Translates to: NPEPLLLELRKR*QQVLRLERWFK
Trigger: TTTGAACCAGCGCTCAAGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
3UTR CCA 72 bp AGGATATTTATTGTTCCAAGAAACCCTGGACCATGTTaGCTACGTAACCACCCACGAGAGCACAGCTGGCCT +
Preference number: 3 (lower is better)
Translates to: RIFIVPRNPGPC*LRNHPREHSWP
Trigger: AGGCCAGCTGTGCTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
3UTR-3UTR CAA 90 bp CTACGGACAGGATATTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAGCCTCGGCAGGCCTCTaGCAGGTCCATTTTACTAGT +
Preference number: 3 (lower is better)
Translates to: LRTGYLLFQETLDHVGYVASAGL*QVHFTS
Trigger: ACTAGTAAAATGGACCTGCAAGAGGCCTGCCGAGGC...TACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATATCCTGTCCGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR CCA 90 bp GTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTGGCCAGGGTGACAGGTaGGAGAGCCGCGGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: VGSPGLRAAADPGQQAALGQGDR*ESRGLS
Trigger: CGAGAGGCCGCGGCTCTCCCACCTGTCACCCTGGCC...AAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp CGGGCCACCAGCCGCCGGGCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCAGAGACCCGGGCCGCTaGAGAGACGCAGCGCCACCG +
Preference number: 4 (lower is better)
Translates to: RATSRRATVAFVCGLSFTRDPGR*RDAAPP
Trigger: CGGTGGCGCTGCGTCTCTGCAGCGGCCCGGGTCTCT...GGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCTGGTGGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp GTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTCAGGGCTTCCGCAGCTaGGGCCAGGCAGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VGSPGLRAAADPGQQAALQGFRS*GQAGKD
Trigger: ATCTTTCCCTGCCTGGCCTCAGCTGCGGAAGCCCTG...AAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp CAGTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCCTCCTTGGTTGGAGATaGGCCGAGGACCGTGGTACC +
Preference number: 4 (lower is better)
Translates to: QLGLQASGRQRTPDSRPLLLGWR*AEDRGT
Trigger: GGTACCACGGTCCTCGGCCCATCTCCAACCAAGGAG...GAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp AAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGGGTGAAGCTCGAGGGTaGTGCGGGGCTGCTCTGGCG +
Preference number: 4 (lower is better)
Translates to: KPTTPHGEARGWCGAALAGEARG*CGAALA
Trigger: CGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACC...CGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265806.12
3UTR CAA 72 bp GGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCTTTTaGTGTTGGAGTCCCAGGGCCCGGGCCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GSGPRTAGRSFF*CWSPRARATSR
Trigger: GCGGCTGGTGGCCCGGGCCCTGGGACTCCAACACAAAAAGAAAGAGCGGCCTGCTGTCCGGGGTCCGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp CCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTGAGGACCGTGGTACCTaGTGGGGCAGGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PTTPHGEARGWCGAALASEDRGT*WGRRQE
Trigger: CTCCTGCCTCCTGCCCCAGCAGGTACCACGGTCCTC...AGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp GGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCTTCGGGGAACCGCAGCTaGTCCTTGGTTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: GSPGLRAAADPGQQAALSSGNRS*SLVGDG
Trigger: CCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGA...AGAAAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp CCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAACTCCCGGGTCAGGGCTTCCAGCCCCCATTCTTCCTaGCTGCGCAGCACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PCVRGRILSTENSRVRASSPHSS*LRSTRG
Trigger: GCCCCGGGTGCTGCGCAGGCAGGAAGAATGGGGGCT...GGAAGCCCTGACCCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp GGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCTTCGTCCTCCGAGCAGCTaGTGGGGCCATCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLQASGRQRTPDSRPLFLRPPSS*WGHPLP
Trigger: TGGAAGAGGATGGCCCCAGCAGCTGCTCGGAGGACG...AAGAAAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp GTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCGGCCAGGGTGACAGGTaGGAGAGCCGCGGCCTCTCG +
Preference number: 4 (lower is better)
Translates to: VKAYGVGGASYVGTQIQAGQGDR*ESRGLS
Trigger: CGAGAGGCCGCGGCTCTCCCACCTGTCACCCTGGCC...GGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp CCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTCCCATTCTTCCTGCCTaGGCAGCACCCGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: PTTPHGEARGWCGAALASPILPA*AAPGAH
Trigger: ATGTGCCCCGGGTGCTGCGCAGGCAGGAAGAATGGG...AGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp CCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTGCGTCCTCCGAGCAGCTaGTGGGGCCATCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PPHPMVKLEGGAGLLWRLRPPSS*WGHPLP
Trigger: TGGAAGAGGATGGCCCCAGCAGCTGCTCGGAGGACG...CAGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp TTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCTCCAGGCTCGGGGAACCGCAGCTaGTCCTTGGTTGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: LGAPATSGRRSRPVGSPGSGNRS*SLVGDG
Trigger: CCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGA...GCCTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp TATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCGAAGCTCGAGGGTGGTaGGGGGCTGCTCTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: YGVGGASYVGTQIQASWVEARGW*GAALAS
Trigger: AGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTC...GACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp TGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCTCCAGCCTCCGAGCAGCTGCTaGGGCCATCCTCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: CWGRQLRRDADPGQLGLQPPSSC*GHPLPP
Trigger: AGGTGGAAGAGGATGGCCCCAGCAGCTGCTCGGAGG...CTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp TGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCTCTTTCTTTTTGTGTTaGAGTCCCAGGGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: WVSRPQGGSGPRTAGRSFSFFLC*SPRARA
Trigger: GGCCCGGGCCCTGGGACTCCAACACAAAAAGAAAGA...GAAAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp TGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCGAAGTCATTCTCGGCTaGGGAGAGGAAGACACCATC +
Preference number: 4 (lower is better)
Translates to: WVSRPQGGSGPRTAGRSFEVILG*GEEDTI
Trigger: GATGGTGTCTTCCTCTCCTCAGCCGAGAATGACTTC...GAAAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp CCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTTGTCCTGGTGACAGATaGCCGTCCTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PTTPHGEARGWCGAALASCPGDR*PSSSSS
Trigger: GCTGGAAGAGGAGGACGGTCATCTGTCACCAGGACA...AGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp GCCGCCGGGCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGACCCATTCTTCCTGCCTaGGCAGCACCCGGGGCACAT +
Preference number: 4 (lower is better)
Translates to: AAGPQSHLSVASPSPDAGPILPA*AAPGAH
Trigger: ATGTGCCCCGGGTGCTGCGCAGGCAGGAAGAATGGG...TCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp TCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGAGCCCCCATTCTTCCTaGCTGCGCAGCACCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SVKAYGVGGASYVGTQIQSPHSS*LRSTRG
Trigger: GCCCCGGGTGCTGCGCAGGCAGGAAGAATGGGGGCT...CTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp GTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTGGGAAAGATGCCGAGTaGGTGAGTATCATCCACCCA +
Preference number: 4 (lower is better)
Translates to: VGSPGLRAAADPGQQAALGKDAE*VSIIHP
Trigger: TGGGTGGATGATACTCACGCACTCGGCATCTTTCCC...AAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp GTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTCCAGGCAGGGAAAGATaGCGAGTGCGTGAGTATCAT +
Preference number: 4 (lower is better)
Translates to: VGSPGLRAAADPGQQAALPGRER*RVREYH
Trigger: ATGATACTCACGCACTCGGCATCTTTCCCTGCCTGG...AAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp AGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTATGGGCCGAGGACCGTaGTACCTGCTGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: RLMVLGAPATSGRRSRPVMGRGP*YLLGQE
Trigger: CTCCTGCCCCAGCAGGTACCACGGTCCTCGGCCCAT...AACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp TATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCATCTCCAGGCTCTTCTaGGTCCCTGCCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: YGVGGASYVGTQIQASWVISRLF*VPASWG
Trigger: GCCCCAGCTGGCAGGGACCCAGAAGAGCCTGGAGAT...GACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp AGCCGCCGGGCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGATCTCCAGGCTCTTCTaGGTCCCTGCCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SRRATVAFVCGLSFTRRRISRLF*VPASWG
Trigger: GCCCCAGCTGGCAGGGACCCAGAAGAGCCTGGAGAT...CCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp CGGGCCACCAGCCGCCGGGCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCGTTCTTGTCACCTATTaGGAGGGGGCGCACCTGCCA +
Preference number: 4 (lower is better)
Translates to: RATSRRATVAFVCGLSFTVLVTY*EGAHLP
Trigger: TGGCAGGTGCGCCCCCTCCCAATAGGTGACAAGAAC...GGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCTGGTGGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp CAGTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCGAAAAGAAGAACCTTTaGCAGCTGCTTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLGLQASGRQRTPDSRPLEKKNL*QLLLQQ
Trigger: CTGCTGCAGAAGCAGCTGTCAAAGGTTCTTCTTTTC...GAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp GCGTCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGGCTTCCGCAGCTaGGGCCAGGCAGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: ASVKAYGVGGASYVGTQIQGFRS*GQAGKD
Trigger: ATCTTTCCCTGCCTGGCCTCAGCTGCGGAAGCCCTG...GATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCACCACACCCCATGGTaGAGCTCGAGGGTGGTGCGG +
Preference number: 4 (lower is better)
Translates to: KLKPTTPHGEARGWCGAAHHTPW*SSRVVR
Trigger: CCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTG...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp CTGCTTGGTTCCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAACTCCCGGGTCCTCCGAGCAGCTGCTaGGGCCATCCTCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LLGSLCEGPDLEHRELPGPPSSC*GHPLPP
Trigger: AGGTGGAAGAGGATGGCCCCAGCAGCTGCTCGGAGG...ACCCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp CCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTGTCTTTCTTTTTGTGTTaGAGTCCCAGGGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PPHPMVKLEGGAGLLWRLSFFLC*SPRARA
Trigger: GGCCCGGGCCCTGGGACTCCAACACAAAAAGAAAGA...CAGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp CATGTTGGCTACGTAACCACCCACGAGAGCACAGCTGGCCTCGGCAGGCCTCTTCCACGAGAGCACAGCTaGCCTCGGCAGGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HVGYVTTHESTAGLGRPLPREHS*PRQASC
Trigger: GCAAGAGGCCTGCCGAGGCCAGCTGTGCTCTCGTGG...AAGAGGCCTGCCGAGGCCAGCTGTGCTCTCGTGGGTGGTTACGTAGCCAACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR TCA 90 bp GTCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCATCTCCCTTCCCTGACTaGCTCTCAGGCCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VCEGLWCWGRQLRRDADPSPFPD*LSGPRG
Trigger: GCCTCTGGGGCCTGAGAGTCAGTCAGGGAAGGGAGA...TGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp GGCCGCTCTTTCTTTTTGTGTTGGAGTCCCAGGGCCCGGGCCACCAGCCGCCGGGCCTCTGCAAGGCTTTaGGCTTTGACTGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GRSFFLCWSPRARATSRRASARL*ALTAWF
Trigger: GAACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGC...CCGGCGGCTGGTGGCCCGGGCCCTGGGACTCCAACACAAAAAGAAAGAGCGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp CCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTGTTTTCCAGGTCTAGCTaGAGGGTGGACCCAAACCGT +
Preference number: 4 (lower is better)
Translates to: PPHPMVKLEGGAGLLWRLFSRSS*RVDPNR
Trigger: ACGGTTTGGGTCCACCCTGCAGCTAGACCTGGAAAA...CAGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp ACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTAGGGTGGTGCGGGGCTaGTCTGGCGTCTGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: TKLKPTTPHGEARGWCGARVVRG*SGVCEG
Trigger: GCCTTCACAGACGCCAGAGCAGCCCCGCACCACCCT...AGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp GCGTCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCGAAGGCTTATGGTGTTaGGGGCGCCAGCTACGTCGG +
Preference number: 4 (lower is better)
Translates to: ASVKAYGVGGASYVGTQIEGLWC*GRQLRR
Trigger: CCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTC...GATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGACGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp CCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTCAAGGCTTTGAGCTTTaGCTGCTTGGTTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PTTPHGEARGWCGAALASQGFEL*LLGSLC
Trigger: ACACAGGGAACCAAGCAGTCAAAGCTCAAAGCCTTG...AGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTAAGGCTGGTCAGGCTTaGGTCCACGATACCACCGGC +
Preference number: 4 (lower is better)
Translates to: KLKPTTPHGEARGWCGAAKAGQA*VHDTTG
Trigger: GCCGGTGGTATCGTGGACGCAAGCCTGACCAGCCTT...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp CCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTGCTTTGAGCTTTGACTaGTTGGTTCCCTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: PTTPHGEARGWCGAALASALSFD*LVPCVR
Trigger: CCTCACACAGGGAACCAAGCAGTCAAAGCTCAAAGC...AGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp AAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTCGGTCCAGTTCCTCCTaGATCCGGTGGACGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KAYGVGGASYVGTQIQASRSSSS*IRWTKS
Trigger: TGACTTCGTCCACCGGATCCAGGAGGAACTGGACCG...ACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp TGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCTCCAGGAGGCGACTGGAGAGTaGGGGGAAAAGAAGAACCTT +
Preference number: 4 (lower is better)
Translates to: CWGRQLRRDADPGQLGLQEATGE*GEKKNL
Trigger: AAGGTTCTTCTTTTCCCCCCACTCTCCAGTCGCCTC...CTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp GCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCATGGGCCGAGGACCGTaGTACCTGCTGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ATVAFVCGLSFTRRRSFGMGRGP*YLLGQE
Trigger: CTCCTGCCCCAGCAGGTACCACGGTCCTCGGCCCAT...GCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp TCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGCTCCTTGGTTGGAGATaGGCCGAGGACCGTGGTACC +
Preference number: 4 (lower is better)
Translates to: SVKAYGVGGASYVGTQIQLLGWR*AEDRGT
Trigger: GGTACCACGGTCCTCGGCCCATCTCCAACCAAGGAG...CTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTACCGCAGCTGCTCCTTaGTTGGAGATGGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: KLKPTTPHGEARGWCGAATAAAP*LEMGRG
Trigger: TCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGT...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp CCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAACTCCCGGGTCAGGGCTTCCGTCCCTGATCAGAGTTaGGGTCTCCAGCACCAACAT +
Preference number: 4 (lower is better)
Translates to: PCVRGRILSTENSRVRASVPDQS*GLQHQH
Trigger: ATGTTGGTGCTGGAGACCCCAACTCTGATCAGGGAC...GGAAGCCCTGACCCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTGGTCTAGCTGCAGGGTaGACCCAAACCGTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KLKPTTPHGEARGWCGAAGLAAG*TQTVWP
Trigger: TGGCCACACGGTTTGGGTCCACCCTGCAGCTAGACC...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp TGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCTCCAGCAGACGCAGGAGTTTTaGCCTCTGCAAGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: CWGRQLRRDADPGQLGLQQTQEF*PLQGFE
Trigger: CTCAAAGCCTTGCAGAGGCCAAAACTCCTGCGTCTG...CTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
3UTR CAA 72 bp TTTGACTGCTTGGTTCCCTGTGTGAGGGGCCGGATCTaGAGCACCGAGAACTCCCGGGTCAGGGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: FDCLVPCVRGRI*STENSRVRASA
Trigger: TGCGGAAGCCCTGACCCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAGTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTACCCTGATGTCCTGGTaGCAGATGACCGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLKPTTPHGEARGWCGAATLMSW*QMTVLL
Trigger: GAGGAGGACGGTCATCTGTCACCAGGACATCAGGGT...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp CCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCTTTTTGTCAAGGCTTTGAGCTTTaGCTGCTTGGTTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PGLRAAADPGQQAALSFCQGFEL*LLGSLC
Trigger: ACACAGGGAACCAAGCAGTCAAAGCTCAAAGCCTTG...ACAAAAAGAAAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp GTCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCACTGCTCTGGCGTCTGTaGAGGCTTATGGTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VCEGLWCWGRQLRRDADPLLWRL*RLMVLG
Trigger: CCCCAACACCATAAGCCTTCACAGACGCCAGAGCAG...TGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp CCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCTTTTTGTTTTGACAGCTGCTTCTaGAGCAGAAAGCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PGLRAAADPGQQAALSFCFDSCF*SRKRSS
Trigger: ACTGGACCGCTTTCTGCTGCAGAAGCAGCTGTCAAA...ACAAAAAGAAAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp AGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTTCCTCCTGGATCCGGTaGACGAAGTCATTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RLMVLGAPATSGRRSRPVSSWIR*TKSFSA
Trigger: AGCCGAGAATGACTTCGTCCACCGGATCCAGGAGGA...AACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp CAGCCGCCGGGCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGGCGACTGGAGAGTaGGGGGAAAAGAAGAACCTT +
Preference number: 4 (lower is better)
Translates to: QPPGHSRICLWPLLHQTQEATGE*GEKKNL
Trigger: AAGGTTCTTCTTTTCCCCCCACTCTCCAGTCGCCTC...CTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp TGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCTCCAGAACAGGGTCCAGCAGTaGCTCATTCTCACACCTTTG +
Preference number: 4 (lower is better)
Translates to: CWGRQLRRDADPGQLGLQNRVQQ*LILTPL
Trigger: CAAAGGTGTGAGAATGAGCCACTGCTGGACCCTGTT...CTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp AAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTGAAGTCATTCTCGGCTaGGGAGAGGAAGACACCATC +
Preference number: 4 (lower is better)
Translates to: KAYGVGGASYVGTQIQASEVILG*GEEDTI
Trigger: GATGGTGTCTTCCTCTCCTCAGCCGAGAATGACTTC...ACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTAGGTCCTCTGTTCCCTaGGTCATCAGCACAGGGAGT +
Preference number: 4 (lower is better)
Translates to: KLKPTTPHGEARGWCGAARSSVP*VISTGS
Trigger: ACTCCCTGTGCTGATGACTCAGGGAACAGAGGACCT...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp CCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGTCTGTGGATCTTCTCTATCTaGATCTCCTTCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PPHPMVKLEGGAGLLWRLWIFSI*ISFFVR
Trigger: CCTGACGAAGAAGGAGATTCAGATAGAGAAGATCCA...CAGACGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp GGCCGCTCTTTCTTTTTGTGTTGGAGTCCCAGGGCCCGGGCCACCAGCCGCCGGTGGATCTTCTCTATCTaGATCTCCTTCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GRSFFLCWSPRARATSRRWIFSI*ISFFVR
Trigger: CCTGACGAAGAAGGAGATTCAGATAGAGAAGATCCA...CCGGCGGCTGGTGGCCCGGGCCCTGGGACTCCAACACAAAAAGAAAGAGCGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp GTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCGTATCATCCACCCACTaGATCCTGAACCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VKAYGVGGASYVGTQIQAVSSTH*ILNPFS
Trigger: AGAGAAGGGGTTCAGGATTCAGTGGGTGGATGATAC...GGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp GCGTCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCGCCTCTGCAAGGCTTTaGGCTTTGACTGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: ASVKAYGVGGASYVGTQIASARL*ALTAWF
Trigger: GAACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGC...GATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp GTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGAACCTTTGACAGCTaGTTCTGCAGCAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: VKAYGVGGASYVGTQIQARTFDS*FCSRKR
Trigger: CCGCTTTCTGCTGCAGAAGCAGCTGTCAAAGGTTCT...GGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp GGGAAAGATGCCGAGTGCGTGAGTATCATCCACCCACTGAATCCTGAACCCCTTGAGGACCGTGGTACCTaGTGGGGCAGGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GKDAECVSIIHPLNPEPLEDRGT*WGRRQE
Trigger: CTCCTGCCTCCTGCCCCAGCAGGTACCACGGTCCTC...AAGGGGTTCAGGATTCAGTGGGTGGATGATACTCACGCACTCGGCATCTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp AAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTGGGAAAGATGCCGAGTaGGTGAGTATCATCCACCCA +
Preference number: 4 (lower is better)
Translates to: KAYGVGGASYVGTQIQASGKDAE*VSIIHP
Trigger: TGGGTGGATGATACTCACGCACTCGGCATCTTTCCC...ACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp CAGCCGCCGGGCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGCTTTGAGCTTTGACTaGTTGGTTCCCTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: QPPGHSRICLWPLLHQTQALSFD*LVPCVR
Trigger: CCTCACACAGGGAACCAAGCAGTCAAAGCTCAAAGC...CTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTTGGACCCAAACCGTGTaGCCATCTCCACCATGTCTC +
Preference number: 4 (lower is better)
Translates to: KLKPTTPHGEARGWCGAAWTQTV*PSPPCL
Trigger: GAGACATGGTGGAGATGGCCACACGGTTTGGGTCCA...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp TCTGGGACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCAGCACAGGGAGTCCCTaGTCAGAGTTGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SGTKLKPTTPHGEARGWCSTGSP*SELGSP
Trigger: TGGAGACCCCAACTCTGATCAGGGACTCCCTGTGCT...GCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGTCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp ATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAGGCAAGGCTGGTCAGGCTTaGGTCCACGATACCACCGGC +
Preference number: 4 (lower is better)
Translates to: ICLWPLLHQTQEFWPLQGKAGQA*VHDTTG
Trigger: GCCGGTGGTATCGTGGACGCAAGCCTGACCAGCCTT...GCCTTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp CAGCAGGTCCTCCGTCTTGAGCGCTGGTTCAAAGTCATAGATCTCTACCACGTGGGGAGGGGGCGCACCTaGCACCAACACAAACCGCTT +
Preference number: 4 (lower is better)
Translates to: QQVLRLERWFKVIDLYHVGRGRT*HQHKPL
Trigger: AAGCGGTTTGTGTTGGTGGCAGGTGCGCCCCCTCCC...CACGTGGTAGAGATCTATGACTTTGAACCAGCGCTCAAGACGGAGGACCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp CGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAACCGCAGCTGCTCCTTaGTTGGAGATGGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RICLWPLLHQTQEFWPLQTAAAP*LEMGRG
Trigger: TCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGT...TTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp ACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGGCACATACAAAGGCTaGTCAGGCTTGCGTCCACGA +
Preference number: 4 (lower is better)
Translates to: TKLKPTTPHGEARGWCGAGTYKG*SGLRPR
Trigger: TCGTGGACGCAAGCCTGACCAGCCTTTGTATGTGCC...AGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTGTCCCTGATCAGAGTTaGGGTCTCCAGCACCAACAT +
Preference number: 4 (lower is better)
Translates to: KLKPTTPHGEARGWCGAAVPDQS*GLQHQH
Trigger: ATGTTGGTGCTGGAGACCCCAACTCTGATCAGGGAC...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp TATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCCTGAACCCCTTCTCTTaGAACTCAGAAAACGTTGCC +
Preference number: 4 (lower is better)
Translates to: YGVGGASYVGTQIQASWVLNPFS*NSENVA
Trigger: GGCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAG...GACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp ATTTCTGGGACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGCAGATCCAGGCCAGTTaGGTCTCCAGGCCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ISGTKLKPTTPHGEARGWQIQAS*VSRPQG
Trigger: GCCCTGAGGCCTGGAGACCCAACTGGCCTGGATCTG...CCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGTCCCAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp TTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAGGCTACCCTGATGTCCTGGTaGCAGATGACCGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FVCGLSFTRRRSFGLCKATLMSW*QMTVLL
Trigger: GAGGAGGACGGTCATCTGTCACCAGGACATCAGGGT...AGCCTTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp GTCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCATTTGACAGCTGCTTCTaGAGCAGAAAGCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VCEGLWCWGRQLRRDADPFDSCF*SRKRSS
Trigger: ACTGGACCGCTTTCTGCTGCAGAAGCAGCTGTCAAA...TGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp AAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTTTCTCTGCTGTTCTATaGATCAGGTACCGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: KLKPTTPHGEARGWCGAAFSAVL*IRYRRR
Trigger: TCGCCTCCGGTACCTGATCCATAGAACAGCAGAGAA...AGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp GCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCGGCACATACAAAGGCTaGTCAGGCTTGCGTCCACGA +
Preference number: 4 (lower is better)
Translates to: ATVAFVCGLSFTRRRSFGGTYKG*SGLRPR
Trigger: TCGTGGACGCAAGCCTGACCAGCCTTTGTATGTGCC...GCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp TCTGGGACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGTCTGTGAAGGCTTATaGTGTTGGGGGCGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SGTKLKPTTPHGEARGWCVCEGL*CWGRQL
Trigger: TAGCTGGCGCCCCCAACACCATAAGCCTTCACAGAC...GCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGTCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp GTCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGAAAAGAAGAACCTTTaGCAGCTGCTTCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VCEGLWCWGRQLRRDADPEKKNL*QLLLQQ
Trigger: CTGCTGCAGAAGCAGCTGTCAAAGGTTCTTCTTTTC...TGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR TCA 90 bp CAGCAGGTCCTCCGTCTTGAGCGCTGGTTCAAAGTCATAGATCTCTACCACGTGAGCACAGGGAGTCCCTaGTCAGAGTTGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QQVLRLERWFKVIDLYHVSTGSP*SELGSP
Trigger: TGGAGACCCCAACTCTGATCAGGGACTCCCTGTGCT...CACGTGGTAGAGATCTATGACTTTGAACCAGCGCTCAAGACGGAGGACCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp ATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAGGCTCCTCCTGGATCCGGTaGACGAAGTCATTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ICLWPLLHQTQEFWPLQGSSWIR*TKSFSA
Trigger: AGCCGAGAATGACTTCGTCCACCGGATCCAGGAGGA...GCCTTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp GGGAAAGATGCCGAGTGCGTGAGTATCATCCACCCACTGAATCCTGAACCCCTTAGGTCCTCTGTTCCCTaGGTCATCAGCACAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GKDAECVSIIHPLNPEPLRSSVP*VISTGS
Trigger: ACTCCCTGTGCTGATGACTCAGGGAACAGAGGACCT...AAGGGGTTCAGGATTCAGTGGGTGGATGATACTCACGCACTCGGCATCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp TCTGGGACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGAACTCAGAAAACGTTaGCAGCAGGTCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: SGTKLKPTTPHGEARGWCELRKR*QQVLRL
Trigger: AAGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTC...GCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGTCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp AGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGCACAGCTGGCCTCCTCGGCAGGCCTCTTaGAGGTCCATTTTACTAGTT +
Preference number: 4 (lower is better)
Translates to: RNPGPCWLRNHPREHSWPPRQAS*RSILLV
Trigger: AACTAGTAAAATGGACCTGCAAGAGGCCTGCCGAGG...AGGCCAGCTGTGCTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR TCA 90 bp CGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAGTATCATCCACCCACTaGATCCTGAACCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RICLWPLLHQTQEFWPLQVSSTH*ILNPFS
Trigger: AGAGAAGGGGTTCAGGATTCAGTGGGTGGATGATAC...TTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp TTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAGGCTAGAACCTTTGACAGCTaGTTCTGCAGCAGAAAGCGG +
Preference number: 4 (lower is better)
Translates to: FVCGLSFTRRRSFGLCKARTFDS*FCSRKR
Trigger: CCGCTTTCTGCTGCAGAAGCAGCTGTCAAAGGTTCT...AGCCTTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp TTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAGGCTGAACTCAGAAAACGTTaGCAGCAGGTCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: FVCGLSFTRRRSFGLCKAELRKR*QQVLRL
Trigger: AAGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTC...AGCCTTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR GCA 90 bp ATTTCTGGGACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGCCAGGCAGGGAAAGATaGCGAGTGCGTGAGTATCAT +
Preference number: 4 (lower is better)
Translates to: ISGTKLKPTTPHGEARGWPGRER*RVREYH
Trigger: ATGATACTCACGCACTCGGCATCTTTCCCTGCCTGG...CCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGTCCCAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR GCA 90 bp TCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAGCAGGAACGGGAGAGTaGGTGTTCTTGTCACCTATT +
Preference number: 4 (lower is better)
Translates to: SHLSVASPSPDAGVLASAAGTGE*VFLSPI
Trigger: AATAGGTGACAAGAACACGCACTCTCCCGTTCCTGC...TGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp TCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCATTCTCTGCTGTTCTATaGATCAGGTACCGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: SHLSVASPSPDAGVLASAFSAVL*IRYRRR
Trigger: TCGCCTCCGGTACCTGATCCATAGAACAGCAGAGAA...TGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CCA 90 bp AGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGCACAGCTGGCCTCTGAACCCCTTCTCTTaGAACTCAGAAAACGTTGCC +
Preference number: 4 (lower is better)
Translates to: RNPGPCWLRNHPREHSWPLNPFS*NSENVA
Trigger: GGCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAG...AGGCCAGCTGTGCTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR CCA 90 bp CAGCAGGTCCTCCGTCTTGAGCGCTGGTTCAAAGTCATAGATCTCTACCACGTGCAGACGCAGGAGTTTTaGCCTCTGCAAGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: QQVLRLERWFKVIDLYHVQTQEF*PLQGFE
Trigger: CTCAAAGCCTTGCAGAGGCCAAAACTCCTGCGTCTG...CACGTGGTAGAGATCTATGACTTTGAACCAGCGCTCAAGACGGAGGACCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp CTACGGACAGGATATTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTACAGGGCTTCCGCAGCTaGGGCCAGGCAGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: LRTGYLLFQETLDHVGYVQGFRS*GQAGKD
Trigger: ATCTTTCCCTGCCTGGCCTCAGCTGCGGAAGCCCTG...TACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATATCCTGTCCGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR GCA 90 bp TCTGGGACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCCCCCAACGGAGAAGCTaGTCAAGAGATCAAAATTCT +
Preference number: 4 (lower is better)
Translates to: SGTKLKPTTPHGEARGWCPQRRS*SRDQNS
Trigger: AGAATTTTGATCTCTTGAGCAGCTTCTCCGTTGGGG...GCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGTCCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CCA 90 bp ATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGCAAGGCCTGAACCCCTTCTCTTaGAACTCAGAAAACGTTGCC +
Preference number: 4 (lower is better)
Translates to: ICLWPLLHQTQEFWPLQGLNPFS*NSENVA
Trigger: GGCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAG...GCCTTGCAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR TCA 90 bp ATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGCACCAAGGCTTTGAGCTTTaGCTGCTTGGTTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: IVPRNPGPCWLRNHPREHQGFEL*LLGSLC
Trigger: ACACAGGGAACCAAGCAGTCAAAGCTCAAAGCCTTG...GTGCTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR GCA 90 bp ATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGCACGCTTTGAGCTTTGACTaGTTGGTTCCCTGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: IVPRNPGPCWLRNHPREHALSFD*LVPCVR
Trigger: CCTCACACAGGGAACCAAGCAGTCAAAGCTCAAAGC...GTGCTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR TCA 90 bp TTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGGCCTCTGCAAGGCTTTaGGCTTTGACTGCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: FIVPRNPGPCWLRNHPREASARL*ALTAWF
Trigger: GAACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGC...CTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR TCA 90 bp TATTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGGTATCATCCACCCACTaGATCCTGAACCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: YLLFQETLDHVGYVTTHEVSSTH*ILNPFS
Trigger: AGAGAAGGGGTTCAGGATTCAGTGGGTGGATGATAC...CTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR GCA 90 bp CGGACAGGATATTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCGAACTCAGAAAACGTTaGCAGCAGGTCCTCCGTCTT +
Preference number: 4 (lower is better)
Translates to: RTGYLLFQETLDHVGYVTELRKR*QQVLRL
Trigger: AAGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTC...GGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATATCCTGTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR GCA 90 bp CTACGGACAGGATATTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAGGGAAAGATGCCGAGTaGGTGAGTATCATCCACCCA +
Preference number: 4 (lower is better)
Translates to: LRTGYLLFQETLDHVGYVGKDAE*VSIIHP
Trigger: TGGGTGGATGATACTCACGCACTCGGCATCTTTCCC...TACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATATCCTGTCCGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR GCA 90 bp CTACGGACAGGATATTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTACCAGGCAGGGAAAGATaGCGAGTGCGTGAGTATCAT +
Preference number: 4 (lower is better)
Translates to: LRTGYLLFQETLDHVGYVPGRER*RVREYH
Trigger: ATGATACTCACGCACTCGGCATCTTTCCCTGCCTGG...TACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATATCCTGTCCGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR CCA 90 bp TTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGTCTCACCATGGTTTTTaGCCTCTGCAAGGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: FIVPRNPGPCWLRNHPRESHHGF*PLQGFE
Trigger: CTCAAAGCCTTGCAGAGGCCAAAAACCATGGTGAGA...CTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR CCA 90 bp ACAGGATATTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCAACCCTGGACCATGTTaGCTACGTAACCACCCACGA +
Preference number: 4 (lower is better)
Translates to: TGYLLFQETLDHVGYVTTNPGPC*LRNHPR
Trigger: TCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTT...GGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATATCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR TCA 90 bp TTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGTGGATCTTCTCTATCTaGATCTCCTTCTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: FIVPRNPGPCWLRNHPREWIFSI*ISFFVR
Trigger: CCTGACGAAGAAGGAGATTCAGATAGAGAAGATCCA...CTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS CCA 90 bp GGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTaGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GVGGASYVGTQIQAS*VSRPQGGSGPRTAG
Trigger: GCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp CAGTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCGCAGCTGCTCCTTGGTaGGAGATGGGCCGAGGACCG +
Preference number: 5 (lower is better)
Translates to: QLGLQASGRQRTPDSRPLAAAPW*EMGRGP
Trigger: CGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGC...GAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS GCA 90 bp CCTGCCTGCGCAGCACCCGGGGCACATACAAAGGCTGGTCAGGCTTaGGTCCACGATACCACCGGCCAGCCCGGGCACCTCGGGGAACCG +
Preference number: 5 (lower is better)
Translates to: PACAAPGAHTKAGQA*VHDTTGQPGHLGEP
Trigger: CGGTTCCCCGAGGTGCCCGGGCTGGCCGGTGGTATCGTGGACGCAAGCCTGACCAGCCTTTGTATGTGCCCCGGGTGCTGCGCAGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CCA 90 bp TACCACCGGCCAGCCCGGGCACCTCGGGGAACCGCAGCTGCTCCTTaGTTGGAGATGGGCCGAGGACCGTGGTACCTGCTGGGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: YHRPARAPRGTAAAP*LEMGRGPWYLLGQE
Trigger: CTCCTGCCCCAGCAGGTACCACGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGAGGTGCCCGGGCTGGCCGGTGGTA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS GCA 90 bp TCCACGATACCACCGGCCAGCCCGGGCACCTCGGGGAACCGCAGCTaGTCCTTGGTTGGAGATGGGCCGAGGACCGTGGTACCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: STIPPASPGTSGNRS*SLVGDGPRTVVPAG
Trigger: CCCAGCAGGTACCACGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGAGGTGCCCGGGCTGGCCGGTGGTATCGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS-3UTR CAA 90 bp GGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCTTGCTGGGGCCTCTCTCTaGAGCACCGAGGTAGAGGTC +
Preference number: 5 (lower is better)
Translates to: GLQASGRQRTPDSRPLFLAGASL*STEVEV
Trigger: GACCTCTACCTCGGTGCTCAAGAGAGAGGCCCCAGC...AAGAAAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CAA 90 bp CGGGCCACCAGCCGCCGGGCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCGTGAGGGGCCGGATCTaGAGCACCGAGAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: RATSRRATVAFVCGLSFTVRGRI*STENSR
Trigger: CCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCAC...GGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCTGGTGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS CCA 90 bp CCCCATTCTTCCTGCCTGCGCAGCACCCGGGGCACATACAAAGGCTaGTCAGGCTTGCGTCCACGATACCACCGGCCAGCCCGGGCACCT +
Preference number: 5 (lower is better)
Translates to: PHSSCLRSTRGTYKG*SGLRPRYHRPARAP
Trigger: AGGTGCCCGGGCTGGCCGGTGGTATCGTGGACGCAAGCCTGACCAGCCTTTGTATGTGCCCCGGGTGCTGCGCAGGCAGGAAGAATGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS-3UTR CAA 90 bp AAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGGCTGGGGCCTCTCTCTaGAGCACCGAGGTAGAGGTC +
Preference number: 5 (lower is better)
Translates to: KPTTPHGEARGWCGAALAAGASL*STEVEV
Trigger: GACCTCTACCTCGGTGCTCAAGAGAGAGGCCCCAGC...CGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp GTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTGGCCGCTCTTTCTTTTaGTGTTGGAGTCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VGSPGLRAAADPGQQAALGRSFF*CWSPRA
Trigger: GGCCCTGGGACTCCAACACAAAAAGAAAGAGCGGCC...AAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CAA 90 bp AAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGCTCTGGCGAAAGGCTGGTCAGGCTaGCGTCCACGATACCACCGG +
Preference number: 5 (lower is better)
Translates to: KPTTPHGEARGWCGAALAKGWSG*RPRYHR
Trigger: CCGGTGGTATCGTGGACGCAAGCCTGACCAGCCTTT...CGCCAGAGCAGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp CCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCTTTTTGTAAAGGCTGGTCAGGCTaGCGTCCACGATACCACCGG +
Preference number: 5 (lower is better)
Translates to: PGLRAAADPGQQAALSFCKGWSG*RPRYHR
Trigger: CCGGTGGTATCGTGGACGCAAGCCTGACCAGCCTTT...ACAAAAAGAAAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CAA 90 bp GTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTTTCCTTCTTCGTCAGGTaGTCTGTGATCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VGSPGLRAAADPGQQAALSFFVR*SVISCS
Trigger: GCTGCAGGAGATCACAGACAACCTGACGAAGAAGGA...AAGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CAA 90 bp AAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTGTGAGGGGCCGGATCTaGAGCACCGAGAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: KAYGVGGASYVGTQIQASVRGRI*STENSR
Trigger: CCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCAC...ACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp GGCCGCTCTTTCTTTTTGTGTTGGAGTCCCAGGGCCCGGGCCACCAGCCGCCGGGGAGAGTGCGTGTTCTaGTCACCTATTGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GRSFFLCWSPRARATSRRGECVF*SPIGRG
Trigger: CCCCCTCCCAATAGGTGACAAGAACACGCACTCTCC...CCGGCGGCTGGTGGCCCGGGCCCTGGGACTCCAACACAAAAAGAAAGAGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CAA 90 bp CCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAACTCCCGGGTCAGGGCTTCCCTCTTTCTTTTTGTGTaGGAGTCCCAGGGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: PCVRGRILSTENSRVRASLFLFV*ESQGPG
Trigger: GCCCGGGCCCTGGGACTCCAACACAAAAAGAAAGAG...GGAAGCCCTGACCCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS GCA 90 bp GCCTCTCTCTTGAGCACCGAGGTAGAGGTCAGCCCCCATTCTTCCTaGCTGCGCAGCACCCGGGGCACATACAAAGGCTGGTCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: ASLLSTEVEVSPHSS*LRSTRGTYKGWSGL
Trigger: CAAGCCTGACCAGCCTTTGTATGTGCCCCGGGTGCTGCGCAGGCAGGAAGAATGGGGGCTGACCTCTACCTCGGTGCTCAAGAGAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS-3UTR CAA 90 bp AGTTGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGGCCGCTCTGGAAAAGAAGAACCTTaGACAGCTGCTTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SWVSRPQGGSGPRTAGRSGKEEP*TAASAA
Trigger: TGCTGCAGAAGCAGCTGTCAAAGGTTCTTCTTTTCC...AGAGCGGCCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CAA 90 bp TGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCTCCAGGGAACTCAGAAAACGTaGCCAGCAGGTCCTCCGTCT +
Preference number: 5 (lower is better)
Translates to: CWGRQLRRDADPGQLGLQGTQKT*PAGPPS
Trigger: AGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTCC...CTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp TTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCTCCAGGCGGCCTCTGCAAGGCTTaGAGCTTTGACTGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LGAPATSGRRSRPVGSPGGLCKA*SFDCLV
Trigger: AACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGCC...GCCTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp CGGGCCACCAGCCGCCGGGCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCGGCCTCTGCAAGGCTTaGAGCTTTGACTGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: RATSRRATVAFVCGLSFTGLCKA*SFDCLV
Trigger: AACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGCC...GGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCCGGCGGCTGGTGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CAA 90 bp ACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTAACCGCAGCTGCTCCTaGGTTGGAGATGGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: TKLKPTTPHGEARGWCGANRSCS*VGDGPR
Trigger: CCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGTT...AGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp GCGTCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCTCTTTCTTTTTGTGTaGGAGTCCCAGGGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: ASVKAYGVGGASYVGTQILFLFV*ESQGPG
Trigger: GCCCGGGCCCTGGGACTCCAACACAAAAAGAAAGAG...GATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS TCA 90 bp GCGGTCCAGTTCCTCCTGGATCCGGTGGACGAAGTCATTCTCGGCTaGGGAGAGGAAGACACCATCCAAGCAGAGAAGGGCCAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: AVQFLLDPVDEVILG*GEEDTIQAEKGQGD
Trigger: GTCACCCTGGCCCTTCTCTGCTTGGATGGTGTCTTCCTCTCCTCAGCCGAGAATGACTTCGTCCACCGGATCCAGGAGGAACTGGACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000517633.6
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
ENST00000625275.3
CDS-3UTR CAA 90 bp CCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAACTCCCGGGTCAGGGCTTCCCCTGAACCCCTTCTCTaGGAACTCAGAAAACGTTGC +
Preference number: 5 (lower is better)
Translates to: PCVRGRILSTENSRVRASPEPLL*ELRKRC
Trigger: GCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAGG...GGAAGCCCTGACCCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CAA 90 bp GTCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCGCTCTTTCTTTTaGTGTTGGAGTCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VCEGLWCWGRQLRRDADPGRSFF*CWSPRA
Trigger: GGCCCTGGGACTCCAACACAAAAAGAAAGAGCGGCC...TGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS CCA 90 bp CCTCTGTTCCCTGAGTCATCAGCACAGGGAGTCCCTGATCAGAGTTaGGGTCTCCAGCACCAACATCTCCAGGCTCTTCTGGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: PLFPESSAQGVPDQS*GLQHQHLQALLGPC
Trigger: GCAGGGACCCAGAAGAGCCTGGAGATGTTGGTGCTGGAGACCCCAACTCTGATCAGGGACTCCCTGTGCTGATGACTCAGGGAACAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
ENST00000625275.3
CDS-3UTR CAA 90 bp ATTTCTGGGACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGGCAGCTGCTCCTTGGTaGGAGATGGGCCGAGGACCG +
Preference number: 5 (lower is better)
Translates to: ISGTKLKPTTPHGEARGWAAAPW*EMGRGP
Trigger: CGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGC...CCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGTCCCAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp TATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTGGGTCCCTGAACCCCTTCTCTaGGAACTCAGAAAACGTTGC +
Preference number: 5 (lower is better)
Translates to: YGVGGASYVGTQIQASWVPEPLL*ELRKRC
Trigger: GCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAGG...GACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp ACTAAACTAAAGCCCACCACACCCCATGGTGAAGCTCGAGGGTGGTGCGGGGCTGGGCCACAGTCGCATTaGTCTGTGGCCTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: TKLKPTTPHGEARGWCGAGPQSH*SVASPS
Trigger: TGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCC...AGCCCCGCACCACCCTCGAGCTTCACCATGGGGTGTGGTGGGCTTTAGTTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp CATGTTGGCTACGTAACCACCCACGAGAGCACAGCTGGCCTCGGCAGGCCTCTTGCCTCGGCAGGCCTCTaGCAGGTCCATTTTACTAGT +
Preference number: 5 (lower is better)
Translates to: HVGYVTTHESTAGLGRPLASAGL*QVHFTS
Trigger: ACTAGTAAAATGGACCTGCAAGAGGCCTGCCGAGGC...AAGAGGCCTGCCGAGGCCAGCTGTGCTCTCGTGGGTGGTTACGTAGCCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS GCA 90 bp AGCCTCTTCTCCAACAGACTCTCCTTCCCCTTTTCCAGGTCTAGCTaGAGGGTGGACCCAAACCGTGTGGCCATCTCCACCATGTCTCCC +
Preference number: 5 (lower is better)
Translates to: SLFSNRLSFPFSRSS*RVDPNRVAISTMSP
Trigger: GGGAGACATGGTGGAGATGGCCACACGGTTTGGGTCCACCCTGCAGCTAGACCTGGAAAAGGGGAAGGAGAGTCTGTTGGAGAAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000519952.6
ENST00000521588.4
ENST00000625275.3
CDS CCA 90 bp TCTCCAACAGACTCTCCTTCCCCTTTTCCAGGTCTAGCTGCAGGGTaGACCCAAACCGTGTGGCCATCTCCACCATGTCTCCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: SPTDSPSPFPGLAAG*TQTVWPSPPCLPSL
Trigger: CAGGGAAGGGAGACATGGTGGAGATGGCCACACGGTTTGGGTCCACCCTGCAGCTAGACCTGGAAAAGGGGAAGGAGAGTCTGTTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000519952.6
ENST00000521588.4
ENST00000625275.3
CDS CCA 90 bp GTTGTCTGTGATCTAGGAGAGATCGGACCCTTAGCAAGGGGAGCTTaGACACGCAGAGCTCCCAAACCACTAGCCCACGCGCTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: VVCDLGEIGPLARGA*TRRAPKPLAHALRA
Trigger: AGCTCTCAGCGCGTGGGCTAGTGGTTTGGGAGCTCTGCGTGTCCAAGCTCCCCTTGCTAAGGGTCCGATCTCTCCTAGATCACAGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523720.1
CDS-3UTR CAA 90 bp TCTGTGAAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGTCCTTCTTCGTCAGGTaGTCTGTGATCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SVKAYGVGGASYVGTQIQSFFVR*SVISCS
Trigger: GCTGCAGGAGATCACAGACAACCTGACGAAGAAGGA...CTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTTCACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp ATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGCACGTGAGGGGCCGGATCTaGAGCACCGAGAACTCCCGG +
Preference number: 5 (lower is better)
Translates to: IVPRNPGPCWLRNHPREHVRGRI*STENSR
Trigger: CCGGGAGTTCTCGGTGCTCAAGATCCGGCCCCTCAC...GTGCTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR CAA 90 bp AGTCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCCTCTGTGTTCTTGTCACCTATaGGGAGGGGGCGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: SRICLWPLLHQTQEFWPLCSCHL*GGGAPA
Trigger: GGCAGGTGCGCCCCCTCCCAATAGGTGACAAGAACA...CAGAGGCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS GCA 90 bp CCAGCCCTCCCCAACGGAGAAGCTGCTCAAGAGATCAAAATTCTCTaGTGTTCTATGGATCAGGTACCGGAGGCGACTGGAGAGTGGGGG +
Preference number: 5 (lower is better)
Translates to: PALPNGEAAQEIKIL*CSMDQVPEATGEWG
Trigger: CCCCCACTCTCCAGTCGCCTCCGGTACCTGATCCATAGAACAGCAGAGAATTTTGATCTCTTGAGCAGCTTCTCCGTTGGGGAGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000521588.4
ENST00000522012.6
ENST00000625275.3
CDS CCA 90 bp AGCTGCTTCTGCAGCAGAAAGCGGTCCAGTTCCTCCTGGATCCGGTaGACGAAGTCATTCTCGGCTGAGGAGAGGAAGACACCATCCAAG +
Preference number: 5 (lower is better)
Translates to: SCFCSRKRSSSSWIR*TKSFSAEERKTPSK
Trigger: CTTGGATGGTGTCTTCCTCTCCTCAGCCGAGAATGACTTCGTCCACCGGATCCAGGAGGAACTGGACCGCTTTCTGCTGCAGAAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000517633.6
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
ENST00000625275.3
CDS-3UTR CAA 90 bp AAGGCTTATGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTGGAAAAGAAGAACCTTaGACAGCTGCTTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: KAYGVGGASYVGTQIQASGKEEP*TAASAA
Trigger: TGCTGCAGAAGCAGCTGTCAAAGGTTCTTCTTTTCC...ACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCATAAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS-3UTR CAA 90 bp GCCACAGTCGCATTTGTCTGTGGCCTCTCCTTCACCAGACGCAGGAGTTTTGGCGGAACTCAGAAAACGTaGCCAGCAGGTCCTCCGTCT +
Preference number: 5 (lower is better)
Translates to: ATVAFVCGLSFTRRRSFGGTQKT*PAGPPS
Trigger: AGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTCC...GCCAAAACTCCTGCGTCTGGTGAAGGAGAGGCCACAGACAAATGCGACTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS CCA 90 bp ACCTTTGACAGCTGCTTCTGCAGCAGAAAGCGGTCCAGTTCCTCCTaGATCCGGTGGACGAAGTCATTCTCGGCTGAGGAGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: TFDSCFCSRKRSSSS*IRWTKSFSAEERKT
Trigger: TGTCTTCCTCTCCTCAGCCGAGAATGACTTCGTCCACCGGATCCAGGAGGAACTGGACCGCTTTCTGCTGCAGAAGCAGCTGTCAAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000517633.6
ENST00000518840.6
ENST00000521588.4
ENST00000522012.6
ENST00000625275.3
CDS CCA 90 bp CGATTTGACAGCTGCTTCTGCAGCAGAAAGCGGTCCAGTTCCTCCTaGATCCGGTGGACGAAGTCATTCTCGGCTGAGGAGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: RFDSCFCSRKRSSSS*IRWTKSFSAEERKT
Trigger: TGTCTTCCTCTCCTCAGCCGAGAATGACTTCGTCCACCGGATCCAGGAGGAACTGGACCGCTTTCTGCTGCAGAAGCAGCTGTCAAATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519952.6
CDS CCA 90 bp CAGCAGCAGGCAGACTGGGCTGCAAGGTCAAGACGTCAAGACGCATaGGTTTTACGGGAGGGCACTTACTTGTATGGAGTCCCCACTAAG +
Preference number: 5 (lower is better)
Translates to: QQQADWAARSRRQDA*VLREGTYLYGVPTK
Trigger: CTTAGTGGGGACTCCATACAAGTAAGTGCCCTCCCGTAAAACCCATGCGTCTTGACGTCTTGACCTTGCAGCCCAGTCTGCCTGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523720.1
CDS-3UTR CAA 90 bp CCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGCACAGCTGGTCCTTCTTCGTCAGGTaGTCTGTGATCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PRNPGPCWLRNHPREHSWSFFVR*SVISCS
Trigger: GCTGCAGGAGATCACAGACAACCTGACGAAGAAGGA...CCAGCTGTGCTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS GCA 90 bp TCTCTCACCATGGTTTTTGGCCTCTGCAAGGCTTTGAGCTTTGACTaGTTGGTTCCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAAC +
Preference number: 5 (lower is better)
Translates to: SLTMVFGLCKALSFD*LVPCVRGRILSTEN
Trigger: GTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGCCAAAAACCATGGTGAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR CAA 90 bp CCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGCACAGCTGGCCTGAACCCCTTCTCTaGGAACTCAGAAAACGTTGC +
Preference number: 5 (lower is better)
Translates to: PRNPGPCWLRNHPREHSWPEPLL*ELRKRC
Trigger: GCAACGTTTTCTGAGTTCCAAGAGAAGGGGTTCAGG...CCAGCTGTGCTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS-3UTR CAA 90 bp TTCTCTCCAGGCAGCTCCTCCACGAAGGAGGATGTGTCCAAATGGATCTTCTCTGGGCCACAGTCGCATTaGTCTGTGGCCTCTCCTTCA +
Preference number: 5 (lower is better)
Translates to: FSPGSSSTKEDVSKWIFSGPQSH*SVASPS
Trigger: TGAAGGAGAGGCCACAGACAAATGCGACTGTGGCCC...AGAGAAGATCCATTTGGACACATCCTCCTTCGTGGAGGAGCTGCCTGGAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522012.6
CDS-3UTR CAA 90 bp ATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGAGAGCACGGAACTCAGAAAACGTaGCCAGCAGGTCCTCCGTCT +
Preference number: 5 (lower is better)
Translates to: IVPRNPGPCWLRNHPREHGTQKT*PAGPPS
Trigger: AGACGGAGGACCTGCTGGCAACGTTTTCTGAGTTCC...GTGCTCTCGTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS GCA 90 bp CTACGTAACCACCCACGAGAGCACAGCTGGCCTCGGCAGGCCTCTTaGAGGTCCATTTTACTAGTTACTACTTTGAAGTCATGGAAAACT +
Preference number: 5 (lower is better)
Translates to: LRNHPREHSWPRQAS*RSILLVTTLKSWKT
Trigger: AGTTTTCCATGACTTCAAAGTAGTAACTAGTAAAATGGACCTGCAAGAGGCCTGCCGAGGCCAGCTGTGCTCTCGTGGGTGGTTACGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS CCA 90 bp CCAACGGAGAAGCTGCTCAAGAGATCAAAATTCTCTGCTGTTCTATaGATCAGGTACCGGAGGCGATTTGACAGCTGCTTCTGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PTEKLLKRSKFSAVL*IRYRRRFDSCFCSR
Trigger: TCTGCTGCAGAAGCAGCTGTCAAATCGCCTCCGGTACCTGATCCATAGAACAGCAGAGAATTTTGATCTCTTGAGCAGCTTCTCCGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519952.6
CDS TCA 90 bp AATGGATCTTCTCTATCTGAATCTCCTTCTTCGTCAGGTTGTCTGTaGTCTAGGAGAGATCGGACCCTTAGCAAGGGGAGCTTGGACACG +
Preference number: 5 (lower is better)
Translates to: NGSSLSESPSSSGCL*SRRDRTLSKGSLDT
Trigger: CGTGTCCAAGCTCCCCTTGCTAAGGGTCCGATCTCTCCTAGATCACAGACAACCTGACGAAGAAGGAGATTCAGATAGAGAAGATCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523720.1
CDS-3UTR CAA 90 bp GGATATTTATTGTTCCAAGAAACCCTGGACCATGTTGGCTACGTAACCACCCACGGCCTCTGCAAGGCTTaGAGCTTTGACTGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: GYLLFQETLDHVGYVTTHGLCKA*SFDCLV
Trigger: AACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGCC...GTGGGTGGTTACGTAGCCAACATGGTCCAGGGTTTCTTGGAACAATAAATATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS CCA 72 bp GGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTTaGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGG +
Preference number: 6 (lower is better)
Translates to: GASYVGTQIQAS*VSRPQGGSGPR
Trigger: CCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS CAA 72 bp GGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTaGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCG +
Preference number: 6 (lower is better)
Translates to: GRQLRRDADPGQ*GLQASGRQRTP
Trigger: CGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS CAA 90 bp CACCGGCCAGCCCGGGCACCTCGGGGAACCGCAGCTGCTCCTTGGTaGGAGATGGGCCGAGGACCGTGGTACCTGCTGGGGCAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: HRPARAPRGTAAAPW*EMGRGPWYLLGQEA
Trigger: TGCCTCCTGCCCCAGCAGGTACCACGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGAGGTGCCCGGGCTGGCCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CAA 90 bp TGGTGTTGGGGGCGCCAGCTACGTCGGGACGCAGATCCAGGCCAGTaGGGTCTCCAGGCCTCAGGGCGGCAGCGGACCCCGGACAGCAGG +
Preference number: 6 (lower is better)
Translates to: WCWGRQLRRDADPGQ*GLQASGRQRTPDSR
Trigger: CCTGCTGTCCGGGGTCCGCTGCCGCCCTGAGGCCTGGAGACCCAACTGGCCTGGATCTGCGTCCCGACGTAGCTGGCGCCCCCAACACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265806.12
CDS GCA 72 bp CCACCGGCCAGCCCGGGCACCTCGGGGAACCGCAGCTaGTCCTTGGTTGGAGATGGGCCGAGGACCGTGGTA +
Preference number: 6 (lower is better)
Translates to: PPASPGTSGNRS*SLVGDGPRTVV
Trigger: TACCACGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGAGGTGCCCGGGCTGGCCGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CAA 72 bp GCCCGGGCACCTCGGGGAACCGCAGCTGCTCCTTGGTaGGAGATGGGCCGAGGACCGTGGTACCTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: ARAPRGTAAAPW*EMGRGPWYLLG
Trigger: CCCCAGCAGGTACCACGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGAGGTGCCCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CAA 90 bp ATACCACCGGCCAGCCCGGGCACCTCGGGGAACCGCAGCTGCTCCTaGGTTGGAGATGGGCCGAGGACCGTGGTACCTGCTGGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: IPPASPGTSGNRSCS*VGDGPRTVVPAGAG
Trigger: TCCTGCCCCAGCAGGTACCACGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGAGGTGCCCGGGCTGGCCGGTGGTAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CAA 90 bp TCCTGCCTGCGCAGCACCCGGGGCACATACAAAGGCTGGTCAGGCTaGCGTCCACGATACCACCGGCCAGCCCGGGCACCTCGGGGAACC +
Preference number: 6 (lower is better)
Translates to: SCLRSTRGTYKGWSG*RPRYHRPARAPRGT
Trigger: GGTTCCCCGAGGTGCCCGGGCTGGCCGGTGGTATCGTGGACGCAAGCCTGACCAGCCTTTGTATGTGCCCCGGGTGCTGCGCAGGCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CCA 72 bp CCAGCCCGGGCACCTCGGGGAACCGCAGCTGCTCCTTaGTTGGAGATGGGCCGAGGACCGTGGTACCTGCTG +
Preference number: 6 (lower is better)
Translates to: PARAPRGTAAAP*LEMGRGPWYLL
Trigger: CAGCAGGTACCACGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGAGGTGCCCGGGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CAA 72 bp GCCAGCCCGGGCACCTCGGGGAACCGCAGCTGCTCCTaGGTTGGAGATGGGCCGAGGACCGTGGTACCTGCT +
Preference number: 6 (lower is better)
Translates to: ASPGTSGNRSCS*VGDGPRTVVPA
Trigger: AGCAGGTACCACGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGAGGTGCCCGGGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS GCA 72 bp GCAGCACCCGGGGCACATACAAAGGCTGGTCAGGCTTaGGTCCACGATACCACCGGCCAGCCCGGGCACCTC +
Preference number: 6 (lower is better)
Translates to: AAPGAHTKAGQA*VHDTTGQPGHL
Trigger: GAGGTGCCCGGGCTGGCCGGTGGTATCGTGGACGCAAGCCTGACCAGCCTTTGTATGTGCCCCGGGTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CCA 72 bp CACCTCGGGGAACCGCAGCTGCTCCTTGGTTGGAGATaGGCCGAGGACCGTGGTACCTGCTGGGGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: HLGEPQLLLGWR*AEDRGTCWGRR
Trigger: CCTCCTGCCCCAGCAGGTACCACGGTCCTCGGCCCATCTCCAACCAAGGAGCAGCTGCGGTTCCCCGAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CAA 72 bp CGCAGCACCCGGGGCACATACAAAGGCTGGTCAGGCTaGCGTCCACGATACCACCGGCCAGCCCGGGCACCT +
Preference number: 6 (lower is better)
Translates to: RSTRGTYKGWSG*RPRYHRPARAP
Trigger: AGGTGCCCGGGCTGGCCGGTGGTATCGTGGACGCAAGCCTGACCAGCCTTTGTATGTGCCCCGGGTGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CCA 72 bp TCCTGCCTGCGCAGCACCCGGGGCACATACAAAGGCTaGTCAGGCTTGCGTCCACGATACCACCGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: SCLRSTRGTYKG*SGLRPRYHRPA
Trigger: GGCTGGCCGGTGGTATCGTGGACGCAAGCCTGACCAGCCTTTGTATGTGCCCCGGGTGCTGCGCAGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CAA 90 bp GCGCGGCCTGGGGGAGGTAACGCAGGAACGGGAGAGTGCGTGTTCTaGTCACCTATTGGGAGGGGGCGCACCTGCCACCAACACAAACCG +
Preference number: 6 (lower is better)
Translates to: ARPGGGNAGTGECVF*SPIGRGRTCHQHKP
Trigger: CGGTTTGTGTTGGTGGCAGGTGCGCCCCCTCCCAATAGGTGACAAGAACACGCACTCTCCCGTTCCTGCGTTACCTCCCCCAGGCCGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522012.6
ENST00000625275.3
CDS GCA 72 bp TTGAGCACCGAGGTAGAGGTCAGCCCCCATTCTTCCTaGCTGCGCAGCACCCGGGGCACATACAAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LSTEVEVSPHSS*LRSTRGTYKGW
Trigger: CCAGCCTTTGTATGTGCCCCGGGTGCTGCGCAGGCAGGAAGAATGGGGGCTGACCTCTACCTCGGTGCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
CDS CAA 72 bp GGGGGAGGTAACGCAGGAACGGGAGAGTGCGTGTTCTaGTCACCTATTGGGAGGGGGCGCACCTGCCACCAA +
Preference number: 6 (lower is better)
Translates to: GGGNAGTGECVF*SPIGRGRTCHQ
Trigger: TTGGTGGCAGGTGCGCCCCCTCCCAATAGGTGACAAGAACACGCACTCTCCCGTTCCTGCGTTACCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522012.6
ENST00000625275.3
CDS CCA 72 bp CGCAGGAACGGGAGAGTGCGTGTTCTTGTCACCTATTaGGAGGGGGCGCACCTGCCACCAACACAAACCGCT +
Preference number: 6 (lower is better)
Translates to: RRNGRVRVLVTY*EGAHLPPTQTA
Trigger: AGCGGTTTGTGTTGGTGGCAGGTGCGCCCCCTCCCAATAGGTGACAAGAACACGCACTCTCCCGTTCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522012.6
ENST00000625275.3
CDS CAA 72 bp ACGCAGGAACGGGAGAGTGCGTGTTCTTGTCACCTATaGGGAGGGGGCGCACCTGCCACCAACACAAACCGC +
Preference number: 6 (lower is better)
Translates to: TQERESACSCHL*GGGAPATNTNR
Trigger: GCGGTTTGTGTTGGTGGCAGGTGCGCCCCCTCCCAATAGGTGACAAGAACACGCACTCTCCCGTTCCTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522012.6
ENST00000625275.3
CDS GCA 72 bp TCCAACAGACTCTCCTTCCCCTTTTCCAGGTCTAGCTaGAGGGTGGACCCAAACCGTGTGGCCATCTCCACC +
Preference number: 6 (lower is better)
Translates to: SNRLSFPFSRSS*RVDPNRVAIST
Trigger: GGTGGAGATGGCCACACGGTTTGGGTCCACCCTGCAGCTAGACCTGGAAAAGGGGAAGGAGAGTCTGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000519952.6
ENST00000521588.4
ENST00000625275.3
CDS CCA 72 bp AGCTGCTTCTGCAGCAGAAAGCGGTCCAGTTCCTCCTaGATCCGGTGGACGAAGTCATTCTCGGCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: SCFCSRKRSSSS*IRWTKSFSAEE
Trigger: CTCCTCAGCCGAGAATGACTTCGTCCACCGGATCCAGGAGGAACTGGACCGCTTTCTGCTGCAGAAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000517633.6
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
ENST00000625275.3
CDS CCA 72 bp GACTCTCCTTCCCCTTTTCCAGGTCTAGCTGCAGGGTaGACCCAAACCGTGTGGCCATCTCCACCATGTCTC +
Preference number: 6 (lower is better)
Translates to: DSPSPFPGLAAG*TQTVWPSPPCL
Trigger: GAGACATGGTGGAGATGGCCACACGGTTTGGGTCCACCCTGCAGCTAGACCTGGAAAAGGGGAAGGAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000519952.6
ENST00000521588.4
ENST00000625275.3
CDS TCA 72 bp TTCCTCCTGGATCCGGTGGACGAAGTCATTCTCGGCTaGGGAGAGGAAGACACCATCCAAGCAGAGAAGGGC +
Preference number: 6 (lower is better)
Translates to: FLLDPVDEVILG*GEEDTIQAEKG
Trigger: GCCCTTCTCTGCTTGGATGGTGTCTTCCTCTCCTCAGCCGAGAATGACTTCGTCCACCGGATCCAGGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000517633.6
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
ENST00000625275.3
CDS CCA 72 bp TGCAGCAGAAAGCGGTCCAGTTCCTCCTGGATCCGGTaGACGAAGTCATTCTCGGCTGAGGAGAGGAAGACA +
Preference number: 6 (lower is better)
Translates to: CSRKRSSSSWIR*TKSFSAEERKT
Trigger: TGTCTTCCTCTCCTCAGCCGAGAATGACTTCGTCCACCGGATCCAGGAGGAACTGGACCGCTTTCTGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265806.12
ENST00000411463.2
ENST00000517633.6
ENST00000518840.6
ENST00000519952.6
ENST00000521588.4
ENST00000522012.6
ENST00000625275.3
CDS CAA 90 bp CTCACCATGGTTTTTGGCCTCTGCAAGGCTTTGAGCTTTGACTGCTaGGTTCCCTGTGTGAGGGGCCGGATCTTGAGCACCGAGAACTCC +
Preference number: 6 (lower is better)
Translates to: LTMVFGLCKALSFDC*VPCVRGRILSTENS
Trigger: GGAGTTCTCGGTGCTCAAGATCCGGCCCCTCACACAGGGAACCAAGCAGTCAAAGCTCAAAGCCTTGCAGAGGCCAAAAACCATGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS CCA 72 bp GCAGACTGGGCTGCAAGGTCAAGACGTCAAGACGCATaGGTTTTACGGGAGGGCACTTACTTGTATGGAGTC +
Preference number: 6 (lower is better)
Translates to: ADWAARSRRQDA*VLREGTYLYGV
Trigger: GACTCCATACAAGTAAGTGCCCTCCCGTAAAACCCATGCGTCTTGACGTCTTGACCTTGCAGCCCAGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523720.1
CDS CAA 72 bp CCACCCACGAGAGCACAGCTGGCCTCGGCAGGCCTCTaGCAGGTCCATTTTACTAGTTACTACTTTGAAGTC +
Preference number: 6 (lower is better)
Translates to: PPTRAQLASAGL*QVHFTSYYFEV
Trigger: GACTTCAAAGTAGTAACTAGTAAAATGGACCTGCAAGAGGCCTGCCGAGGCCAGCTGTGCTCTCGTGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS GCA 72 bp CACCCACGAGAGCACAGCTGGCCTCGGCAGGCCTCTTaGAGGTCCATTTTACTAGTTACTACTTTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: HPREHSWPRQAS*RSILLVTTLKS
Trigger: TGACTTCAAAGTAGTAACTAGTAAAATGGACCTGCAAGAGGCCTGCCGAGGCCAGCTGTGCTCTCGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520480.5
CDS TCA 72 bp TCTCTATCTGAATCTCCTTCTTCGTCAGGTTGTCTGTaGTCTAGGAGAGATCGGACCCTTAGCAAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: SLSESPSSSGCL*SRRDRTLSKGS
Trigger: GCTCCCCTTGCTAAGGGTCCGATCTCTCCTAGATCACAGACAACCTGACGAAGAAGGAGATTCAGATAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523720.1
CDS CCA 72 bp AAGCTGCTCAAGAGATCAAAATTCTCTGCTGTTCTATaGATCAGGTACCGGAGGCGATTTGACAGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: KLLKRSKFSAVL*IRYRRRFDSCF
Trigger: GAAGCAGCTGTCAAATCGCCTCCGGTACCTGATCCATAGAACAGCAGAGAATTTTGATCTCTTGAGCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519952.6
CDS TCA 72 bp CGGGAGGGCACTTACTTGTATGGAGTCCCCACTAAGTaGCTGGCAATTACACACATAATGTTCCATAGAATC +
Preference number: 6 (lower is better)
Translates to: REGTYLYGVPTK*LAITHIMFHRI
Trigger: GATTCTATGGAACATTATGTGTGTAATTGCCAGTCACTTAGTGGGGACTCCATACAAGTAAGTGCCCTCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523720.1