RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for QRICH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198218

Ensembl transcript IDs: ENST00000357496.6, ENST00000395443.7, ENST00000411682.1, ENST00000424300.5, ENST00000430979.1, ENST00000437939.5, ENST00000450685.5, ENST00000469910.1, ENST00000477021.1, ENST00000479449.1, ENST00000489642.5, ENST00000498392.1, ENST00000498440.5

Found 546 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTaGGGAGATTCCCTCCAGGGTCCATCCATCATTAATTCCATCTCT +
Preference number: 1 (lower is better)
Translates to: VPLWSAKSVSPVEVG*GDSLQGPSIINSIS
Trigger: AGAGATGGAATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
3UTR-3UTR TCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAGCCGCAGCAGGTTTATaGAGATGCAAAGGGGGCAAA +
Preference number: 2 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPAAAGL*RCKGGK
Trigger: TTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGC...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
3UTR CCA 72 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTaGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCAT +
Preference number: 3 (lower is better)
Translates to: SFPCGQQSLSAQ*KSAGEIPSRVH
Trigger: ATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
3UTR-3UTR CAA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGCCTGGCTGGTTTCTCTaGTGCCATGGCCAAGGCATC +
Preference number: 3 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGPGWFL*CHGQGI
Trigger: GATGCCTTGGCCATGGCACAAGAGAAACCAGCCAGG...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
3UTR-3UTR CAA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCCTGGCTGGTTTCTCTaGTGCCATGGCCAAGGCATC +
Preference number: 3 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDPGWFL*CHGQGI
Trigger: GATGCCTTGGCCATGGCACAAGAGAAACCAGCCAGG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
3UTR CCA 72 bp TGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTaGGGAGATTCCCTCCAGGGTCCATCCATCATTAAT +
Preference number: 3 (lower is better)
Translates to: WSAKSVSPVEVG*GDSLQGPSIIN
Trigger: ATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAGGAGGACACTGGCCGTaGCAACCCGCCGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPGGHWP*QPAAPL
Trigger: AAGGGGAGCGGCGGGTTGGCACGGCCAGTGTCCTCC...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAGCTGGCCCTGTGGAATaGCCAGCACGGTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPAGPVE*PARWPP
Trigger: CGGTGGCCACCGTGCTGGCCATTCCACAGGGCCAGC...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCACTCCCCTTCCCGGGGTaGGCCCTGCTGGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDALPFPG*ALLGWW
Trigger: CCACCATCCCAGCAGGGCTCACCCCGGGAAGGGGAG...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAAGAGCCACCATCGGCTaGGGAGTCTGCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPRATIG*GVCRSR
Trigger: CCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCT...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCACCGCGGCCGGCCCTCTaGTCAGCAGAAGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAPRPAL*SAEASC
Trigger: GCAGGAGGCTTCTGCTGAGCAGAGGGCCGGCCGCGG...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS-3UTR CCA 90 bp TCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCCTGGTTGGAGGACACTaGCCGTGCCAACCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SVSPVEVGWGDSLQGPSILVGGH*PCQPAA
Trigger: AGCGGCGGGTTGGCACGGCCAGTGTCCTCCAACCAG...GATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGCTCCCCTTCCCGGGGTaGGCCCTGCTGGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKLPFPG*ALLGWW
Trigger: CCACCATCCCAGCAGGGCTCACCCCGGGAAGGGGAG...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAAAGGTGGAGGGGGAGTaGGCCCCAAGCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPKVEGE*APSCLH
Trigger: GTGCAAGCAGCTTGGGGCTCACTCCCCCTCCACCTT...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGAGGACACTGGCCGTaGCAACCCGCCGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAGGHWP*QPAAPL
Trigger: AAGGGGAGCGGCGGGTTGGCACGGCCAGTGTCCTCC...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCACACCGCCAGGGACCCTaGTTCTGCCGTCGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAHRQGP*FCRRRS
Trigger: GGAGCGACGACGGCAGAACCAGGGTCCCTGGCGGTG...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAAGTTGTGGGGAGAGCTaGGCCGAGACCTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPSCGES*AETCCG
Trigger: TCCGCAACAGGTCTCGGCTCAGCTCTCCCCACAACT...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGGCCTGGCCTTGGATCTaGACCTGGACCTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGEAWPWI*TWTWMG
Trigger: ACCCATCCAGGTCCAGGTGCAGATCCAAGGCCAGGC...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGTCTGCAGCCTGGATCTaGTGGGCTGCTTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGESAAWI*WAACTC
Trigger: GCACGTGCAAGCAGCCCAGCAGATCCAGGCTGCAGA...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCACTCCTCCGGGATTTCTaGAGCCTGGATCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPLLRDF*SLDLLG
Trigger: GCCCAGCAGATCCAGGCTGCAGAAATCCCGGAGGAG...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAGAGACGGGGTCTGAATaGAGGGGGCTGCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPETGSE*RGLLTV
Trigger: CACAGTCAGCAGCCCCCTCCATTCAGACCCCGTCTC...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCACCAGTGGAAGTCGGCTaGGGAGATTCCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPPVEVG*GDSLQG
Trigger: ACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGG...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGTGCTCAGTAGGCTGGTaGACGGTGAGTTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGECSVGW*TVSCGE
Trigger: CTCCCCACAACTCACCGTTCACCAGCCTACTGAGCA...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp TCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTATGCAGAGACGGGGTCTaGATGGAGGGGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SAQWKSAGEIPSRVHPSLCRDGV*MEGAAD
Trigger: GTCAGCAGCCCCCTCCATTCAGACCCCGTCTCTGCA...TAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp TCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCCTGTGGGTGAGCCACTaGCGTGAACTGCGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SVSPVEVGWGDSLQGPSILWVSH*RELRCR
Trigger: CCTACAACGCAGTTCACGTCAGTGGCTCACCCACAG...GATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAAAGGTGGAGGGGGAGTaGGCCCCAAGCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAKVEGE*APSCLH
Trigger: GTGCAAGCAGCTTGGGGCTCACTCCCCCTCCACCTT...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAATCTGCTGGGCTGCTTaGACGTGCTGCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPICWAA*TCCTWI
Trigger: GATCCAGGTGCAGCACGTGCAAGCAGCCCAGCAGAT...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp CTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGGGAGGACACTGGCCGTaGCAACCCGCCGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: LGHMTLKETQSHHRLRSLGGHWP*QPAAPL
Trigger: AAGGGGAGCGGCGGGTTGGCACGGCCAGTGTCCTCC...CAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGTGGAGTTGCTGCTGCTaGTGCTGTGGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGEWSCCC*CCGGGV
Trigger: GACACCACCACCACAGCAGCAGCAGCAGCAACTCCA...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGCCAGAAAGCCGCGGTTaGCCACGGGCCACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKPESRG*PRATAP
Trigger: AGGAGCTGTGGCCCGTGGGCAACCGCGGCTTTCTGG...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS-3UTR CCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCTGGTTGGAGGACACTaGCCGTGCCAACCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDLVGGH*PCQPAA
Trigger: AGCGGCGGGTTGGCACGGCCAGTGTCCTCCAACCAG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGAATGGCCAGCACGGTaGCCACCGGCTGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEEWPAR*PPAALR
Trigger: TCTCAGGGCAGCCGGTGGCCACCGTGCTGGCCATTC...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACTGCTGCTGGCCCTGTaGAATGGCCAGCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYELLLAL*NGQHGG
Trigger: GCCACCGTGCTGGCCATTCCACAGGGCCAGCAGCAG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCTGCTGCTGGCCCTGTaGAATGGCCAGCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDLLLAL*NGQHGG
Trigger: GCCACCGTGCTGGCCATTCCACAGGGCCAGCAGCAG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGGGTGGTCAGCAAGGTaGAGGGGGAGTGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGGWSAR*RGSEPQ
Trigger: TTGGGGCTCACTCCCCCTCCACCTTGCTGACCACCC...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATTGCAGAGACGGGGTCTaGATGGAGGGGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDCRDGV*MEGAAD
Trigger: GTCAGCAGCCCCCTCCATTCAGACCCCGTCTCTGCA...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCCTCCCCTTCCCGGGGTaGGCCCTGCTGGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LLKMERGHISFHSPSPFPLPFPG*ALLGWW
Trigger: CCACCATCCCAGCAGGGCTCACCCCGGGAAGGGGAG...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AGAACATCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTTGCCAGGGCTGTGGGTaGGCCACTGACGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: RTSFPCGQQSLSAQWKSACQGCG*ATDVNC
Trigger: GCAGTTCACGTCAGTGGCTCACCCACAGCCCTGGCA...AGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGATGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTGCCAGGGCTGTGGGTaGGCCACTGACGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKCQGCG*ATDVNC
Trigger: GCAGTTCACGTCAGTGGCTCACCCACAGCCCTGGCA...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAGGAGTGACCCGGGGCTaGACATCCTTCAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPGVTRG*TSFRTS
Trigger: TGAAGTTCTGAAGGATGTTCAGCCCCGGGTCACTCC...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATAAGGTGGAGGGGGAGTaGGCCCCAAGCTGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDKVEGE*APSCLH
Trigger: GTGCAAGCAGCTTGGGGCTCACTCCCCCTCCACCTT...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp CTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGAGAGCCACCATCGGCTaGGGAGTCTGCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGHMTLKETQSHHRLRSLRATIG*GVCRSR
Trigger: CCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCT...CAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACAGGGACCCTGGTTCTaGCGTCGTCGCTCCAAGACC +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEQGPWF*RRRSKT
Trigger: GGTCTTGGAGCGACGACGGCAGAACCAGGGTCCCTG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGCTGGATCTGCTGGGCTaGTTGCACGTGCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGLDLLG*LHVLHL
Trigger: CAGGTGCAGCACGTGCAAGCAGCCCAGCAGATCCAG...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCACTCCTCCGGGATTTCTaGAGCCTGGATCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDALLRDF*SLDLLG
Trigger: GCCCAGCAGATCCAGGCTGCAGAAATCCCGGAGGAG...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGCTCCTCCGGGATTTCTaGAGCCTGGATCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGLLRDF*SLDLLG
Trigger: GCCCAGCAGATCCAGGCTGCAGAAATCCCGGAGGAG...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTGGGGAGTTTGCTGCTaGGGCTGCTGTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKWGVCC*GCCWGS
Trigger: GGACCCCCAACAGCAGCCGCAGCAGCAAACTCCCCA...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGTGGGGAGTTTGCTGCTaGGGCTGCTGTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKWGVCC*GCCWGS
Trigger: GGACCCCCAACAGCAGCCGCAGCAGCAAACTCCCCA...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGGAGCCCCAAGCTGCTTaGACTCCCATAGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGEEPQAA*TPIASP
Trigger: AGGAGATGCTATGGGAGTGCAAGCAGCTTGGGGCTC...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGTCAGCAGAAGCCTCCTaGGCGCTCTCGAGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKSAEAS*ALSRQH
Trigger: GTGCTGCCTCGAGAGCGCGCAGGAGGCTTCTGCTGA...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS-3UTR CCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGCCTTGGATCTGCACCTaGACCTGGATGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGEPWICT*TWMGCS
Trigger: TGAGCAACCCATCCAGGTCCAGGTGCAGATCCAAGG...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCATGTGGTGCCTGGCCTTaGATCTGCACCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAACGAWP*ICTWTW
Trigger: CCAGGTCCAGGTGCAGATCCAAGGCCAGGCACCACA...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGCTGCTGGGATGGTGGTaGGGAAAGGGCACCCACGGT +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKLLGWW*GKGTHG
Trigger: ACCGTGGGTGCCCTTTCCCCACCACCATCCCAGCAG...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATGCTGCGGCTGCTGTTaGGGGTCCCATATATGGACA +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPCCGCC*GSHIWT
Trigger: TGTCCATATATGGGACCCCCAACAGCAGCCGCAGCA...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGTGGAATCGCAGCAGTTaGCGCCTCCCAATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGWNRSS*RLPMGA
Trigger: GGCACCCATTGGGAGGCGCCAACTGCTGCGATTCCA...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCCCTCAGTCACGTGGCTaGGCAAGACATAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SVSPVEVGWGDSLQGPSIPQSRG*ARHSQV
Trigger: CACTTGGCTATGTCTTGCCCAGCCACGTGACTGAGG...GATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGTGGTCAGCAAGGTaGAGGGGGAGTGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKGWSAR*RGSEPQ
Trigger: TTGGGGCTCACTCCCCCTCCACCTTGCTGACCACCC...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAGTTGGGGGCCACCACTaGCTCAGGTGTCAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPVGGHH*LRCQVK
Trigger: TTTTACCTGACACCTGAGCCAGTGGTGGCCCCCAAC...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGACCAGATTGGGCTGTTaGGGGCCACCACTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGTRLGC*GPPLAQ
Trigger: CTGAGCCAGTGGTGGCCCCCAACAGCCCAATCTGGT...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAACCAGATTGGGCTGTTaGGGGCCACCACTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDATRLGC*GPPLAQ
Trigger: CTGAGCCAGTGGTGGCCCCCAACAGCCCAATCTGGT...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAAGTCTGTCAGCCCAGTaGAAGTCGGCTGGGGAGATT +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPSLSAQ*KSAGEI
Trigger: AATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAGTCTGCTGGAACTCCTaGAGGGCTTCTGGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAVCWNS*RASGPL
Trigger: TAAGGGGCCAGAAGCCCTTCAGGAGTTCCAGCAGAC...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCATGCTCAGTAGGCTGGTaGACGGTGAGTTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAACSVGW*TVSCGE
Trigger: CTCCCCACAACTCACCGTTCACCAGCCTACTGAGCA...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp TGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAATTCCATCTGGCCACCGGCTGCCCTaGGATGGCGTAGGACACAGT +
Preference number: 4 (lower is better)
Translates to: WKSAGEIPSRVHPSLIPSGHRLP*DGVGHS
Trigger: ACTGTGTCCTACGCCATCTCAGGGCAGCCGGTGGCC...AGATGGAATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGTCCTTCATCCTGTGTTaGGGGACAGACCGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGESFILC*GTDRAF
Trigger: AAAGGCACGGTCTGTCCCGCAACACAGGATGAAGGA...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGCCTGGCCTTGGATCTaGACCTGGACCTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKAWPWI*TWTWMG
Trigger: ACCCATCCAGGTCCAGGTGCAGATCCAAGGCCAGGC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGCCTGGCCTTGGATCTaGACCTGGACCTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKAWPWI*TWTWMG
Trigger: ACCCATCCAGGTCCAGGTGCAGATCCAAGGCCAGGC...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCACACCTGGATCTGAGCTaGTTGCAGCTGCGAGGGACT +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAHLDLS*LQLRGT
Trigger: AGTCCCTCGCAGCTGCAAGCAGCTCAGATCCAGGTG...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCTGGATCTGCTGGGCTaGTTGCACGTGCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDLDLLG*LHVLHL
Trigger: CAGGTGCAGCACGTGCAAGCAGCCCAGCAGATCCAG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAATCTGCAGCCTGGATCTaGTGGGCTGCTTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYESAAWI*WAACTC
Trigger: GCACGTGCAAGCAGCCCAGCAGATCCAGGCTGCAGA...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGTGCCTGCCACAGCCTaGACAGCCACTGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEVPATA*TATGMW
Trigger: CCACATTCCAGTGGCTGTGCAGGCTGTGGCAGGCAC...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAATTCTGGTACGTGCCTaGCACAGCCTGCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAILVRA*HSLHSH
Trigger: GTGGCTGTGCAGGCTGTGGCAGGCACGTACCAGAAT...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGATTCTGGTACGTGCCTaGCACAGCCTGCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGILVRA*HSLHSH
Trigger: GTGGCTGTGCAGGCTGTGGCAGGCACGTACCAGAAT...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCACCGTATTCTGGTACGTaGCTGCCACAGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAPYSGT*LPQPAQ
Trigger: CTGTGCAGGCTGTGGCAGGCACGTACCAGAATACGG...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCGTAACTTGGAGTTGCTaGTGCTGCTGCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SVSPVEVGWGDSLQGPSIVTWSC*CCCCGG
Trigger: ACCACCACAGCAGCAGCAGCAGCAACTCCAAGTTAC...GATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGTCAGTGCATAGTGCTTaGATTGGCCACTGCGATGGC +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGESVHSA*IGHCDG
Trigger: GCCATCGCAGTGGCCAATGCAAGCACTATGCACTGA...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAGGCTGGTTTCTCTTGTaGCATGGCCAAGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPGWFLL*HGQGIS
Trigger: TGAGATGCCTTGGCCATGGCACAAGAGAAACCAGCC...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGTGAACGGTGAGTTGTaGGGAGAGCTGAGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGVNGEL*GELSRD
Trigger: GTCTCGGCTCAGCTCTCCCCACAACTCACCGTTCAC...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCGCTGGCCCTGTGGAATaGCCAGCACGGTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: LLKMERGHISFHSPSPFPAGPVE*PARWPP
Trigger: CGGTGGCCACCGTGCTGGCCATTCCACAGGGCCAGC...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGCTGGCCCTGTGGAATaGCCAGCACGGTGGCCACCG +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSAGPVE*PARWPP
Trigger: CGGTGGCCACCGTGCTGGCCATTCCACAGGGCCAGC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGGTGGTGTCTGTTCCTaGGGAGTTTGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKGGVCS*GVCCCG
Trigger: GCCGCAGCAGCAAACTCCCCAGGAACAGACACCACC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGGTGGTGTCTGTTCCTaGGGAGTTTGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDGGVCS*GVCCCG
Trigger: GCCGCAGCAGCAAACTCCCCAGGAACAGACACCACC...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACTGCTGCTGCTGTGGTaGTGGTGTCTGTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYELLLLW*WCLFLG
Trigger: CCCCAGGAACAGACACCACCACCACAGCAGCAGCAG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCTGCTGCTGCTGTGGTaGTGGTGTCTGTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDLLLLW*WCLFLG
Trigger: CCCCAGGAACAGACACCACCACCACAGCAGCAGCAG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAATGGAATCGCAGCAGTTaGCGCCTCCCAATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEWNRSS*RLPMGA
Trigger: GGCACCCATTGGGAGGCGCCAACTGCTGCGATTCCA...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGACCAGATTGGGCTGTTaGGGGCCACCACTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKTRLGC*GPPLAQ
Trigger: CTGAGCCAGTGGTGGCCCCCAACAGCCCAATCTGGT...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAATGTCTGCTGGAACTCCTaGAGGGCTTCTGGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: SPVEVGWGDSLQGPSIINVCWNS*RASGPL
Trigger: TAAGGGGCCAGAAGCCCTTCAGGAGTTCCAGCAGAC...ATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AGAACATCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTTGCTCAGTAGGCTGGTaGACGGTGAGTTGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RTSFPCGQQSLSAQWKSACSVGW*TVSCGE
Trigger: CTCCCCACAACTCACCGTTCACCAGCCTACTGAGCA...AGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGATGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCATGGCGTAGGACACAGTaGTGGGCATGTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAWRRTQ*WACPLC
Trigger: GCAAAGTGGACATGCCCATCACTGTGTCCTACGCCA...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp GAGTCAGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACGGCCACCGGCTGCCCTaGGATGGCGTAGGACACAGT +
Preference number: 4 (lower is better)
Translates to: ESASNFLGHMTLKETQSHGHRLP*DGVGHS
Trigger: ACTGTGTCCTACGCCATCTCAGGGCAGCCGGTGGCC...GTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACTGTGGGTGAGCCACTaGCGTGAACTGCGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYELWVSH*RELRCR
Trigger: CCTACAACGCAGTTCACGTCAGTGGCTCACCCACAG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp TCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAGGAGTGACCCGGGGCTaGACATCCTTCAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: SAQWKSAGEIPSRVHPSLGVTRG*TSFRTS
Trigger: TGAAGTTCTGAAGGATGTTCAGCCCCGGGTCACTCC...TAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCATAGCCAAGTGGAGTaGCCCGGGGCTGAACATCCT +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDHSQVE*PGAEHP
Trigger: AGGATGTTCAGCCCCGGGTCACTCCACTTGGCTATG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATACCTGTTGCGGAGACTaGTGTACCTGCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDTCCGD*CTCTWT
Trigger: GGTCCAGGTGCAGGTACAGCAGTCTCCGCAACAGGT...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGACCTGTTGCGGAGACTaGTGTACCTGCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKTCCGD*CTCTWT
Trigger: GGTCCAGGTGCAGGTACAGCAGTCTCCGCAACAGGT...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACACCTGGATCTGAGCTaGTTGCAGCTGCGAGGGACT +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEHLDLS*LQLRGT
Trigger: AGTCCCTCGCAGCTGCAAGCAGCTCAGATCCAGGTG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGCCGTATTCTGGTACGTaGCTGCCACAGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKPYSGT*LPQPAQ
Trigger: CTGTGCAGGCTGTGGCAGGCACGTACCAGAATACGG...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATTGGAGTTGCTGCTGCTaGTGCTGTGGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDWSCCC*CCGGGV
Trigger: GACACCACCACCACAGCAGCAGCAGCAGCAACTCCA...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTGGAGTTGCTGCTGCTaGTGCTGTGGTGGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKWSCCC*CCGGGV
Trigger: GACACCACCACCACAGCAGCAGCAGCAGCAACTCCA...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCAGCATTTGTCCCATCTaGTCTCTGCTGATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVSPVEVGWGDSLQGPSISICPI*SLLIGW
Trigger: CCAGCCTATCAGCAGAGAGCAGATGGGACAAATGCT...GATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCCACCGCCAGGGACCCTaGTTCTGCCGTCGTCGCTCC +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLHRQGP*FCRRRS
Trigger: GGAGCGACGACGGCAGAACCAGGGTCCCTGGCGGTG...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGTGAACGGTGAGTTGTaGGGAGAGCTGAGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDVNGEL*GELSRD
Trigger: GTCTCGGCTCAGCTCTCCCCACAACTCACCGTTCAC...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAATCTGCACCTGGACCTaGATGGGTTGCTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAICTWT*MGCSVG
Trigger: GCCTACTGAGCAACCCATCCAGGTCCAGGTGCAGAT...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGATCTGCACCTGGACCTaGATGGGTTGCTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGICTWT*MGCSVG
Trigger: GCCTACTGAGCAACCCATCCAGGTCCAGGTGCAGAT...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGCCTTGGATCTGCACCTaGACCTGGATGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGPWICT*TWMGCS
Trigger: TGAGCAACCCATCCAGGTCCAGGTGCAGATCCAAGG...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAATTCCATCTCTGCTGGGATGGTGGTaGGGAAAGGGCACCCACGGT +
Preference number: 4 (lower is better)
Translates to: WKSAGEIPSRVHPSLIPSLLGWW*GKGTHG
Trigger: ACCGTGGGTGCCCTTTCCCCACCACCATCCCAGCAG...AGATGGAATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp GAGTCAGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCTGGTTGGAGGACACTaGCCGTGCCAACCCGCCGCT +
Preference number: 4 (lower is better)
Translates to: ESASNFLGHMTLKETQSHLVGGH*PCQPAA
Trigger: AGCGGCGGGTTGGCACGGCCAGTGTCCTCCAACCAG...GTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGAATGGCCAGCACGGTaGCCACCGGCTGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SQQLSRTYDTQGNPEPPSEWPAR*PPAALR
Trigger: TCTCAGGGCAGCCGGTGGCCACCGTGCTGGCCATTC...CGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGAATGGCCAGCACGGTaGCCACCGGCTGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSEWPAR*PPAALR
Trigger: TCTCAGGGCAGCCGGTGGCCACCGTGCTGGCCATTC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGCTGCTGCTGTGGTGGTaGTGTCTGTTCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKLLLWW*CLFLGS
Trigger: ACTCCCCAGGAACAGACACCACCACCACAGCAGCAG...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGCTGCTGCTGTGGTGGTaGTGTCTGTTCCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKLLLWW*CLFLGS
Trigger: ACTCCCCAGGAACAGACACCACCACCACAGCAGCAG...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAATCTGCTGCTGCTGCTGTaGTGGTGGTGTCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPVEVGWGDSLQGPSIINLLLLL*WWCLFL
Trigger: CAGGAACAGACACCACCACCACAGCAGCAGCAGCAG...ATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGCTGCTGCTGCTGCTGTaGTGGTGGTGTCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKLLLLL*WWCLFL
Trigger: CAGGAACAGACACCACCACCACAGCAGCAGCAGCAG...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGGCTGAACAAGTAACTTaGAGTTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGEAEQVT*SCCCCC
Trigger: GCAGCAGCAGCAGCAACTCCAAGTTACTTGTTCAGC...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGTTGGCGCCTCCCAATaGGTGCCAATCTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGVGASQ*VPICSE
Trigger: CTCAGAACAGATTGGCACCCATTGGGAGGCGCCAAC...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAGTTGGCGCCTCCCAATaGGTGCCAATCTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAVGASQ*VPICSE
Trigger: CTCAGAACAGATTGGCACCCATTGGGAGGCGCCAAC...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCACAAGACATAGCCAAGTaGAGTGACCCGGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAQDIAK*SDPGLN
Trigger: GTTCAGCCCCGGGTCACTCCACTTGGCTATGTCTTG...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCACAAGACATAGCCAAGTaGAGTGACCCGGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAQDIAK*SDPGLN
Trigger: GTTCAGCCCCGGGTCACTCCACTTGGCTATGTCTTG...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGTCTCTGCTGATAGGCTaGACTGAGTACCAGATTGGG +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGESLLIG*TEYQIG
Trigger: CCCAATCTGGTACTCAGTCCAGCCTATCAGCAGAGA...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCTGAACACTGGTGGTaGCTGGACAGGCAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGAEHWW*LDRQVQ
Trigger: TTGAACTTGCCTGTCCAGTCACCACCAGTGTTCAGC...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGAGTTGTGGGGAGAGCTaGGCCGAGACCTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEESCGES*AETCCG
Trigger: TCCGCAACAGGTCTCGGCTCAGCTCTCCCCACAACT...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGTGCAGAGACGGGGTCTaGATGGAGGGGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SQQLSRTYDTQGNPEPPSCRDGV*MEGAAD
Trigger: GTCAGCAGCCCCCTCCATTCAGACCCCGTCTCTGCA...CGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAATGGCGTAGGACACAGTaGTGGGCATGTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEWRRTQ*WACPLC
Trigger: GCAAAGTGGACATGCCCATCACTGTGTCCTACGCCA...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTTGCCAGGGCTGTGGGTaGGCCACTGACGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSCQGCG*ATDVNC
Trigger: GCAGTTCACGTCAGTGGCTCACCCACAGCCCTGGCA...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp TCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTACCACAGCAGAGGAGATaGGATCTTCCTGGAATCGCA +
Preference number: 4 (lower is better)
Translates to: SAQWKSAGEIPSRVHPSLPQQRR*DLPGIA
Trigger: TGCGATTCCAGGAAGATCTCATCTCCTCTGCTGTGG...TAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCACCACAGCAGAGGAGATaGGATCTTCCTGGAATCGCA +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAPQQRR*DLPGIA
Trigger: TGCGATTCCAGGAAGATCTCATCTCCTCTGCTGTGG...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGGAGTGACCCGGGGCTaGACATCCTTCAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDGVTRG*TSFRTS
Trigger: TGAAGTTCTGAAGGATGTTCAGCCCCGGGTCACTCC...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCTGATAGGCTGGACTaGGTACCAGATTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGADRLD*VPDWAV
Trigger: AACAGCCCAATCTGGTACTCAGTCCAGCCTATCAGC...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAGCTGATAGGCTGGACTaGGTACCAGATTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAADRLD*VPDWAV
Trigger: AACAGCCCAATCTGGTACTCAGTCCAGCCTATCAGC...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGTAACTTGGAGTTGCTaGTGCTGCTGCTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGVTWSC*CCCCGG
Trigger: ACCACCACAGCAGCAGCAGCAGCAACTCCAAGTTAC...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGCGCCTCCCAATGGGTaGCAATCTGTTCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEAPPNG*QSVLSI
Trigger: GATGCTCAGAACAGATTGGCACCCATTGGGAGGCGC...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGCGCCTCCCAATGGGTaGCAATCTGTTCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKAPPNG*QSVLSI
Trigger: GATGCTCAGAACAGATTGGCACCCATTGGGAGGCGC...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGAGCCCCAAGCTGCTTaGACTCCCATAGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKEPQAA*TPIASP
Trigger: AGGAGATGCTATGGGAGTGCAAGCAGCTTGGGGCTC...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGCCAAGGCATCTCAGTaGATAGTGCTTGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAAKASQ*IVLALA
Trigger: GGCCAATGCAAGCACTATGCACTGAGATGCCTTGGC...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGCTGGTTTCTCTTGTaGCATGGCCAAGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAGWFLL*HGQGIS
Trigger: TGAGATGCCTTGGCCATGGCACAAGAGAAACCAGCC...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCACAGTTCCCACCCTGTTaGTACACCATGGTAGTGGTG +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAQFPPC*YTMVVV
Trigger: CACCACTACCATGGTGTACCAACAGGGTGGGAACTG...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAAACACTGGTGGTGACTaGACAGGCAAGTTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPNTGGD*TGKFKQ
Trigger: TTGCTTGAACTTGCCTGTCCAGTCACCACCAGTGTT...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGGTGAACGGTGAGTTGTaGGGAGAGCTGAGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: LGHMTLKETQSHHRLRSLVNGEL*GELSRD
Trigger: GTCTCGGCTCAGCTCTCCCCACAACTCACCGTTCAC...CAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGCCTTGGATCTGCACCTaGACCTGGATGGGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKPWICT*TWMGCS
Trigger: TGAGCAACCCATCCAGGTCCAGGTGCAGATCCAAGG...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAATTCCATCTTGTGGTGCCTGGCCTTaGATCTGCACCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: WKSAGEIPSRVHPSLIPSCGAWP*ICTWTW
Trigger: CCAGGTCCAGGTGCAGATCCAAGGCCAGGCACCACA...AGATGGAATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGGAGACGGGGTCTGAATaGAGGGGGCTGCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEEETGSE*RGLLTV
Trigger: CACAGTCAGCAGCCCCCTCCATTCAGACCCCGTCTC...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCACTGGATTTGCTGATGTaGGATGTGCTCCTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAALDLLM*DVLLRD
Trigger: ATCCCGGAGGAGCACATCCCACATCAGCAAATCCAG...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGCTGGATTTGCTGATGTaGGATGTGCTCCTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGLDLLM*DVLLRD
Trigger: ATCCCGGAGGAGCACATCCCACATCAGCAAATCCAG...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCCTGCTGGGATGGTGGTaGGGAAAGGGCACCCACGGT +
Preference number: 4 (lower is better)
Translates to: LLKMERGHISFHSPSPFPLLGWW*GKGTHG
Trigger: ACCGTGGGTGCCCTTTCCCCACCACCATCCCAGCAG...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCCTGCTGCTGGCCCTGTaGAATGGCCAGCACGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLLLLAL*NGQHGG
Trigger: GCCACCGTGCTGGCCATTCCACAGGGCCAGCAGCAG...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAGTGGCACTGTACAGGTaGGCACTGTCTACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAVALYR*ALSTVS
Trigger: ACTGACAGTAGACAGTGCCCACCTGTACAGTGCCAC...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGTTGGCGCCTCCCAATaGGTGCCAATCTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKVGASQ*VPICSE
Trigger: CTCAGAACAGATTGGCACCCATTGGGAGGCGCCAAC...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTGGAATCGCAGCAGTTaGCGCCTCCCAATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEEWNRSS*RLPMGA
Trigger: GGCACCCATTGGGAGGCGCCAACTGCTGCGATTCCA...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACCTCAGTCACGTGGCTaGGCAAGACATAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEPQSRG*ARHSQV
Trigger: CACTTGGCTATGTCTTGCCCAGCCACGTGACTGAGG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGGGTGGTCAGCAAGGTaGAGGGGGAGTGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSGWSAR*RGSEPQ
Trigger: TTGGGGCTCACTCCCCCTCCACCTTGCTGACCACCC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGACAGCAAAGCTGGTTaGTTTCTCTCCAGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKDSKAG*FLSRPR
Trigger: CCTCGGCCTGGAGAGAAACCAACCAGCTTTGCTGTC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS-3UTR TCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCACCCCTTAGAGGCCAGTaGGTCCAGAAATTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAPLRGQ*VQKFLH
Trigger: ATGAAGGAATTTCTGGACTCACTGGCCTCTAAGGGG...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGCCCCTTAGAGGCCAGTaGGTCCAGAAATTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGPLRGQ*VQKFLH
Trigger: ATGAAGGAATTTCTGGACTCACTGGCCTCTAAGGGG...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGCCACAGCAGAGGAGATaGGATCTTCCTGGAATCGCA +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKPQQRR*DLPGIA
Trigger: TGCGATTCCAGGAAGATCTCATCTCCTCTGCTGTGG...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGCCGCAGCAGGTTTATaGAGATGCAAAGGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKAAAGL*RCKGGK
Trigger: TTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGC...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATTTGCGGGACAGACCGTaGCTTTACTCGGATGTACTC +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDLRDRP*LYSDVL
Trigger: GAGTACATCCGAGTAAAGGCACGGTCTGTCCCGCAA...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAATTGCGGGACAGACCGTaGCTTTACTCGGATGTACTC +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYELRDRP*LYSDVL
Trigger: GAGTACATCCGAGTAAAGGCACGGTCTGTCCCGCAA...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTCCTTCATCCTGTGTTaGGGGACAGACCGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKSFILC*GTDRAF
Trigger: AAAGGCACGGTCTGTCCCGCAACACAGGATGAAGGA...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAATCCTTCATCCTGTGTTaGGGGACAGACCGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYESFILC*GTDRAF
Trigger: AAAGGCACGGTCTGTCCCGCAACACAGGATGAAGGA...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGACCTGTTGCGGAGACTaGTGTACCTGCACCTGGACC +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEETCCGD*CTCTWT
Trigger: GGTCCAGGTGCAGGTACAGCAGTCTCCGCAACAGGT...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCATGGGCATGTCCACTTTaGGCTTCTTCACTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAWACPL*ASSLVG
Trigger: TCCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCA...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCATGGGCATGTCCACTTTaGGCTTCTTCACTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAWACPL*ASSLVG
Trigger: TCCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCA...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGTGCCTGCCACAGCCTaGACAGCCACTGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSVPATA*TATGMW
Trigger: CCACATTCCAGTGGCTGTGCAGGCTGTGGCAGGCAC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGATTCTGGTACGTGCCTaGCACAGCCTGCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEEILVRA*HSLHSH
Trigger: GTGGCTGTGCAGGCTGTGGCAGGCACGTACCAGAAT...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCTGGGGAGTTTGCTGCTaGGGCTGCTGTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLWGVCC*GCCWGS
Trigger: GGACCCCCAACAGCAGCCGCAGCAGCAAACTCCCCA...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGCCAAGGCATCTCAGTaGATAGTGCTTGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKAKASQ*IVLALA
Trigger: GGCCAATGCAAGCACTATGCACTGAGATGCCTTGGC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGGCCGAGGCCACGGATaGCCGGGAACGTCACCAGAC +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWGRGHG*PGTSPD
Trigger: GTCTGGTGACGTTCCCGGGCATCCGTGGCCTCGGCC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS-3UTR CCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCAGTTCCCACCCTGTTaGTACACCATGGTAGTGGTG +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDQFPPC*YTMVVV
Trigger: CACCACTACCATGGTGTACCAACAGGGTGGGAACTG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGCAGTTCCCACCCTGTTaGTACACCATGGTAGTGGTG +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKQFPPC*YTMVVV
Trigger: CACCACTACCATGGTGTACCAACAGGGTGGGAACTG...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCATTCTTGCTGGGTTTGTaGCTGAACACTGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAFLLGL*LNTGGD
Trigger: GTCACCACCAGTGTTCAGCCACAAACCCAGCAAGAA...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGAGACGGGGTCTGAATaGAGGGGGCTGCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSETGSE*RGLLTV
Trigger: CACAGTCAGCAGCCCCCTCCATTCAGACCCCGTCTC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGCGCTTCTTCACTGGTTaGAGGACACTGGCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEERFFTG*RTLAVP
Trigger: TGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCG...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGTGGCACTGTACAGGTaGGCACTGTCTACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKVALYR*ALSTVS
Trigger: ACTGACAGTAGACAGTGCCCACCTGTACAGTGCCAC...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGTGGCACTGTACAGGTaGGCACTGTCTACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKVALYR*ALSTVS
Trigger: ACTGACAGTAGACAGTGCCCACCTGTACAGTGCCAC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGGTGGTGTCTGTTCCTaGGGAGTTTGCTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSGGVCS*GVCCCG
Trigger: GCCGCAGCAGCAAACTCCCCAGGAACAGACACCACC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTCTGCTGCTGCTGTGGTaGTGGTGTCTGTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSLLLLW*WCLFLG
Trigger: CCCCAGGAACAGACACCACCACCACAGCAGCAGCAG...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGAGATGAGATCTTCCTaGAATCGCAGCAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKEMRSS*NRSSWR
Trigger: GCGCCAACTGCTGCGATTCCAGGAAGATCTCATCTC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCATCTGTCGCAAGACCTTaGAGAAGGCCAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDASVARP*RRPASC
Trigger: ACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGA...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCATCTCTGCTGATAGGCTaGACTGAGTACCAGATTGGG +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAASLLIG*TEYQIG
Trigger: CCCAATCTGGTACTCAGTCCAGCCTATCAGCAGAGA...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCCCAGTGGAAGTCGGCTaGGGAGATTCCCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LLKMERGHISFHSPSPFPPVEVG*GDSLQG
Trigger: ACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGG...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACCCCTTAGAGGCCAGTaGGTCCAGAAATTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEPLRGQ*VQKFLH
Trigger: ATGAAGGAATTTCTGGACTCACTGGCCTCTAAGGGG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp CTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGGCTGAACACTGGTGGTaGCTGGACAGGCAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LGHMTLKETQSHHRLRSLAEHWW*LDRQVQ
Trigger: TTGAACTTGCCTGTCCAGTCACCACCAGTGTTCAGC...CAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCAGTTGTGGGGAGAGCTaGGCCGAGACCTGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLSCGES*AETCCG
Trigger: TCCGCAACAGGTCTCGGCTCAGCTCTCCCCACAACT...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGGCCACCGGCTGCCCTaGGATGGCGTAGGACACAGT +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWGHRLP*DGVGHS
Trigger: ACTGTGTCCTACGCCATCTCAGGGCAGCCGGTGGCC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGGATGTTGCCATTCATaGACTGTGCTGGAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGGCCHS*TVLERE
Trigger: CTCTCTTTCCAGCACAGTTCATGAATGGCAACATCC...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGCATAGCCAAGTGGAGTaGCCCGGGGCTGAACATCCT +
Preference number: 4 (lower is better)
Translates to: SQQLSRTYDTQGNPEPPSHSQVE*PGAEHP
Trigger: AGGATGTTCAGCCCCGGGTCACTCCACTTGGCTATG...CGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCCATAGCCAAGTGGAGTaGCCCGGGGCTGAACATCCT +
Preference number: 4 (lower is better)
Translates to: LLKMERGHISFHSPSPFPHSQVE*PGAEHP
Trigger: AGGATGTTCAGCCCCGGGTCACTCCACTTGGCTATG...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGAGAGCCACCATCGGCTaGGGAGTCTGCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWRATIG*GVCRSR
Trigger: CCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCT...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGTGCTGTCTGTGTATATaGAGTTCCCACCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGCCLCI*SSHPVG
Trigger: ACCAACAGGGTGGGAACTGCATATACACAGACAGCA...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAACCCAGCCACTTCAGTaGTGTCTGTGTATATGCAGT +
Preference number: 4 (lower is better)
Translates to: SAQWKSAGEIPSRVHPSLTQPLQ*CLCICS
Trigger: ACTGCATATACACAGACAGCACTGAAGTGGCTGGGT...TAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGACCCAGCCACTTCAGTaGTGTCTGTGTATATGCAGT +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGTQPLQ*CLCICS
Trigger: ACTGCATATACACAGACAGCACTGAAGTGGCTGGGT...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGCACCTGGATCTGAGCTaGTTGCAGCTGCGAGGGACT +
Preference number: 4 (lower is better)
Translates to: SQQLSRTYDTQGNPEPPSHLDLS*LQLRGT
Trigger: AGTCCCTCGCAGCTGCAAGCAGCTCAGATCCAGGTG...CGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTATCTGCTGGGCTGCTTaGACGTGCTGCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSICWAA*TCCTWI
Trigger: GATCCAGGTGCAGCACGTGCAAGCAGCCCAGCAGAT...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AGAACATCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGAGTTTGCAAGGGTCTaGACTACCTCTTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: RTSFPCGQQSLSAQWKSAEFARV*TTSSWE
Trigger: CTCCCATGAAGAGGTAGTGCAGACCCTTGCAAACTC...AGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGATGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCGTGCCTGCCACAGCCTaGACAGCCACTGGAATGTGG +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLVPATA*TATGMW
Trigger: CCACATTCCAGTGGCTGTGCAGGCTGTGGCAGGCAC...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTCCGTATTCTGGTACGTaGCTGCCACAGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSPYSGT*LPQPAQ
Trigger: CTGTGCAGGCTGTGGCAGGCACGTACCAGAATACGG...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGCCCATAATTCAACTCTaGCACAGCAGAGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGPIIQL*HSRGDE
Trigger: CTCATCTCCTCTGCTGTGGCAGAGTTGAATTATGGG...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGCCAGCTTCATGTaGTGGTCCACTGTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAKASFM*WSTVFN
Trigger: ATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTT...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGAGCATTTGTCCCATCTaGTCTCTGCTGATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKSICPI*SLLIGW
Trigger: CCAGCCTATCAGCAGAGAGCAGATGGGACAAATGCT...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCTGTGGTGCCTGGCCTTaGATCTGCACCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLCGAWP*ICTWTW
Trigger: CCAGGTCCAGGTGCAGATCCAAGGCCAGGCACCACA...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGCGCTTCTTCACTGGTTaGAGGACACTGGCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: SQQLSRTYDTQGNPEPPSRFFTG*RTLAVP
Trigger: TGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCG...CGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGTTTGCGCTTCTTCACTaGTTGGAGGACACTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LGHMTLKETQSHHRLRSLFALLH*LEDTGR
Trigger: ACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGCAAA...CAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCCTGCTGCTGCTGCTGTaGTGGTGGTGTCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LLKMERGHISFHSPSPFPLLLLL*WWCLFL
Trigger: CAGGAACAGACACCACCACCACAGCAGCAGCAGCAG...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGCTGAACAAGTAACTTaGAGTTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKAEQVT*SCCCCC
Trigger: GCAGCAGCAGCAGCAACTCCAAGTTACTTGTTCAGC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGCTGAACAAGTAACTTaGAGTTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEAEQVT*SCCCCC
Trigger: GCAGCAGCAGCAGCAACTCCAAGTTACTTGTTCAGC...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCTGGCTTCAAAGAATTTaGAAGCAGAAGTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SVSPVEVGWGDSLQGPSIWLQRI*KQKFWG
Trigger: TCCCCAGAACTTCTGCTTCCAAATTCTTTGAAGCCA...GATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGCCAGCTTCATGTGCTaGTCCACTGTCTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEASFMC*STVFNR
Trigger: CCTATTGAAGACAGTGGACCAGCACATGAAGCTGGC...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGTCTGTCGCAAGACCTTaGAGAAGGCCAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKSVARP*RRPASC
Trigger: ACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGA...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGGTTGGGGGCCACCACTaGCTCAGGTGTCAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEEVGGHH*LRCQVK
Trigger: TTTTACCTGACACCTGAGCCAGTGGTGGCCCCCAAC...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGTTTCTCTTGTGCCATaGCCAAGGCATCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKVSLVP*PRHLSA
Trigger: TGCACTGAGATGCCTTGGCCATGGCACAAGAGAAAC...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAATTCCATCTAGTCTGTCAGCCCAGTaGAAGTCGGCTGGGGAGATT +
Preference number: 4 (lower is better)
Translates to: WKSAGEIPSRVHPSLIPSSLSAQ*KSAGEI
Trigger: AATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT...AGATGGAATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATAACATCGTTCCCCTGTaGTCAGCAAAGTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDNIVPL*SAKSVS
Trigger: GCTGACAGACTTTGCTGACCACAGGGGAACGATGTT...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGTTCTGCTGCTTGTCCTaGGTTCTTAAGACTTCTAAT +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGEFCCLS*VLKTSN
Trigger: ATTAGAAGTCTTAAGAACTCAGGACAAGCAGCAGAA...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357496.6
CDS-3UTR TCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCCTGTGGGTGAGCCACTaGCGTGAACTGCGTTGTAGG +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLLWVSH*RELRCR
Trigger: CCTACAACGCAGTTCACGTCAGTGGCTCACCCACAG...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGCAACCTGGACAGTTTaGGCTGAACAAGTAACTTGG +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEATWTV*AEQVTW
Trigger: CCAAGTTACTTGTTCAGCTCAAACTGTCCAGGTTGC...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCGGAAGGCTGTGGCTGTaGCTGTGGTTCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLKMERGHISFHSPSPFPGRLWL*LWFNFS
Trigger: GCTGAAGTTGAACCACAGTCACAGCCACAGCCTTCC...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGGAAGGCTGTGGCTGTaGCTGTGGTTCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSGRLWL*LWFNFS
Trigger: GCTGAAGTTGAACCACAGTCACAGCCACAGCCTTCC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGGTGCCAATCTGTTCTaGGCATCCTTCTCTAGTTCA +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDGANLF*ASFSSS
Trigger: TGAACTAGAGAAGGATGCTCAGAACAGATTGGCACC...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGAGAAATCATAGAGCTTaGTGGGACATCTCAATGGAT +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGERNHRA*WDISMD
Trigger: ATCCATTGAGATGTCCCATCAAGCTCTATGATTTCT...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCATCTGCTGGGCTGCTTaGACGTGCTGCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLICWAA*TCCTWI
Trigger: GATCCAGGTGCAGCACGTGCAAGCAGCCCAGCAGAT...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGTGGAAAGAGAGAGTTTaGAAGGGTCTGCACTACCTC +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKWKERV*KGLHYL
Trigger: GAGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCA...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGCCCATAATTCAACTCTaGCACAGCAGAGGAGATGAG +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKPIIQL*HSRGDE
Trigger: CTCATCTCCTCTGCTGTGGCAGAGTTGAATTATGGG...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATAACACTGGTGGTGACTaGACAGGCAAGTTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDNTGGD*TGKFKQ
Trigger: TTGCTTGAACTTGCCTGTCCAGTCACCACCAGTGTT...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCCGCTTCTTCACTGGTTaGAGGACACTGGCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLRFFTG*RTLAVP
Trigger: TGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCG...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGTTTTCACTACAGATGTaGTGCCCACCATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGFSLQM*CPPSSP
Trigger: AGGAGAAGATGGTGGGCACCACATCTGTAGTGAAAA...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTTGCTGCGGCTGCTGTTaGGGGTCCCATATATGGACA +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSCCGCC*GSHIWT
Trigger: TGTCCATATATGGGACCCCCAACAGCAGCCGCAGCA...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAATAGTAGAGCACATCTaGGTCATAGGGTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: SAQWKSAGEIPSRVHPSLIVEHI*VIGFTF
Trigger: GAAGGTGAACCCTATGACCCAGATGTGCTCTACTAT...TAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGATAGTAGAGCACATCTaGGTCATAGGGTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGIVEHI*VIGFTF
Trigger: GAAGGTGAACCCTATGACCCAGATGTGCTCTACTAT...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GAGTCAGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCAAGACATAGCCAAGTaGAGTGACCCGGGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ESASNFLGHMTLKETQSHQDIAK*SDPGLN
Trigger: GTTCAGCCCCGGGTCACTCCACTTGGCTATGTCTTG...GTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTCCTCAGTCACGTGGCTaGGCAAGACATAGCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSPQSRG*ARHSQV
Trigger: CACTTGGCTATGTCTTGCCCAGCCACGTGACTGAGG...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGTTGGGGGCCACCACTaGCTCAGGTGTCAGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSVGGHH*LRCQVK
Trigger: TTTTACCTGACACCTGAGCCAGTGGTGGCCCCCAAC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGCCAGACAGCAAAGCTaGTTGGTTTCTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSARQQS*LVSLQA
Trigger: GGCCTGGAGAGAAACCAACCAGCTTTGCTGTCTGGC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS-3UTR TCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGCATATATGGACAGTTTaGGCCGTATTCTGGTACGTG +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKHIWTV*AVFWYV
Trigger: CACGTACCAGAATACGGCTCAAACTGTCCATATATG...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCATATATGGACAGTTTaGGCCGTATTCTGGTACGTG +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDHIWTV*AVFWYV
Trigger: CACGTACCAGAATACGGCTCAAACTGTCCATATATG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCGGAAGGCTGTGGCTGTaGCTGTGGTTCAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLGRLWL*LWFNFS
Trigger: GCTGAAGTTGAACCACAGTCACAGCCACAGCCTTCC...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGCATGTAGCCACTCCGTaGACCGAACATAATAAAGAT +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGHVATP*TEHNKD
Trigger: ATCTTTATTATGTTCGGTTCACGGAGTGGCTACATG...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp GAGTCAGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACGCTGATAGGCTGGACTaGGTACCAGATTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ESASNFLGHMTLKETQSHADRLD*VPDWAV
Trigger: AACAGCCCAATCTGGTACTCAGTCCAGCCTATCAGC...GTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTCTGCAGCCTGGATCTaGTGGGCTGCTTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWSAAWI*WAACTC
Trigger: GCACGTGCAAGCAGCCCAGCAGATCCAGGCTGCAGA...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTGGGCATGTCCACTTTaGGCTTCTTCACTGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEEWACPL*ASSLVG
Trigger: TCCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCA...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCGCGCCTCCCAATGGGTaGCAATCTGTTCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLAPPNG*QSVLSI
Trigger: GATGCTCAGAACAGATTGGCACCCATTGGGAGGCGC...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTTTCCGTCTGTTCTaGATACATGTCATCTGTAAC +
Preference number: 4 (lower is better)
Translates to: SFPCGQQSLSAQWKSAGEIFRLF*IHVICN
Trigger: GTTACAGATGACATGTATGCAGAACAGACGGAAAAT...CTCCCCAGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGGCTGGTTTCTCTTGTaGCATGGCCAAGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSGWFLL*HGQGIS
Trigger: TGAGATGCCTTGGCCATGGCACAAGAGAAACCAGCC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGGAATTATTCATATTaGAGAGTCCTTAGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: YDTQGNPEPPSAEESAAAGNYSY*RVLRVP
Trigger: GGGAACCCTAAGGACTCTGCAATATGAATAATTCCC...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR CCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCATCTGCACCTGGACCTaGATGGGTTGCTCAGTAGGC +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLICTWT*MGCSVG
Trigger: GCCTACTGAGCAACCCATCCAGGTCCAGGTGCAGAT...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTTTTGCGCTTCTTCACTaGTTGGAGGACACTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSFALLH*LEDTGR
Trigger: ACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGCAAA...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCACTACAGATGTaGTGCCCACCATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKFSLQM*CPPSSP
Trigger: AGGAGAAGATGGTGGGCACCACATCTGTAGTGAAAA...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAATTTTCACTACAGATGTaGTGCCCACCATCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEFSLQM*CPPSSP
Trigger: AGGAGAAGATGGTGGGCACCACATCTGTAGTGAAAA...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATACAGCCACTGGAATGTaGATGTTGCCATTCATGAAC +
Preference number: 4 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDTATGM*MLPFMN
Trigger: GTTCATGAATGGCAACATCCACATTCCAGTGGCTGT...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GAGTCAGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACGAGATGAGATCTTCCTaGAATCGCAGCAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: ESASNFLGHMTLKETQSHEMRSS*NRSSWR
Trigger: GCGCCAACTGCTGCGATTCCAGGAAGATCTCATCTC...GTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCATCATCTGTAACTTTCTaGCCAGTCTGGTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDASSVTF*PVWCIP
Trigger: TGGAATACACCAGACTGGCCAGAAAGTTACAGATGA...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGTCTCAATGGATTCTCTaGATTTTCCGTCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGSQWIL*IFRLFC
Trigger: GCAGAACAGACGGAAAATCCAGAGAATCCATTGAGA...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGAACATCGTTCCCCTGTaGTCAGCAAAGTCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEENIVPL*SAKSVS
Trigger: GCTGACAGACTTTGCTGACCACAGGGGAACGATGTT...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCATTCTGCTGCTTGTCCTaGGTTCTTAAGACTTCTAAT +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDAFCCLS*VLKTSN
Trigger: ATTAGAAGTCTTAAGAACTCAGGACAAGCAGCAGAA...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000424300.5
CDS-3UTR TCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGTCTGCTGGAACTCCTaGAGGGCTTCTGGCCCCTTA +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWVCWNS*RASGPL
Trigger: TAAGGGGCCAGAAGCCCTTCAGGAGTTCCAGCAGAC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTACTGCGATGGCCTCCTaGATTTCTCTTATCACCAGG +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSTAMAS*ISLITR
Trigger: CCTGGTGATAAGAGAAATTCAGGAGGCCATCGCAGT...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCGCCGCAGCAGGTTTATaGAGATGCAAAGGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLAAAGL*RCKGGK
Trigger: TTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGC...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTCTGGATCTGCTGGGCTaGTTGCACGTGCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGLDLLG*LHVLHL
Trigger: CAGGTGCAGCACGTGCAAGCAGCCCAGCAGATCCAG...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR GCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGCCACTGACGTGAACTaGGTTGTAGGCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWATDVN*VVGFLG
Trigger: CCCCAGGAAGCCTACAACGCAGTTCACGTCAGTGGC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGAGTTTGCAAGGGTCTaGACTACCTCTTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: SQQLSRTYDTQGNPEPPSEFARV*TTSSWE
Trigger: CTCCCATGAAGAGGTAGTGCAGACCCTTGCAAACTC...CGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGAGTTTGCAAGGGTCTaGACTACCTCTTCATGGGAG +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSEFARV*TTSSWE
Trigger: CTCCCATGAAGAGGTAGTGCAGACCCTTGCAAACTC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTGGAAAGAGAGAGTTTaGAAGGGTCTGCACTACCTC +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEEWKERV*KGLHYL
Trigger: GAGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCA...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTAGCATTTGTCCCATCTaGTCTCTGCTGATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSSICPI*SLLIGW
Trigger: CCAGCCTATCAGCAGAGAGCAGATGGGACAAATGCT...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCGCTTGCATTGGCCACTaGGATGGCCTCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLACIGH*DGLLNF
Trigger: GAAATTCAGGAGGCCATCGCAGTGGCCAATGCAAGC...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCTCAGTGCATAGTGCTTaGATTGGCCACTGCGATGGC +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLSVHSA*IGHCDG
Trigger: GCCATCGCAGTGGCCAATGCAAGCACTATGCACTGA...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGTTCTTGCTGGGTTTGTaGCTGAACACTGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SQQLSRTYDTQGNPEPPSFLLGL*LNTGGD
Trigger: GTCACCACCAGTGTTCAGCCACAAACCCAGCAAGAA...CGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp GAGTCAGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACTTCTTGCTGGGTTTGTaGCTGAACACTGGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: ESASNFLGHMTLKETQSHFLLGL*LNTGGD
Trigger: GTCACCACCAGTGTTCAGCCACAAACCCAGCAAGAA...GTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGTGCACTACCTCTTCATaGGAGTTTTTCACTACAGAT +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGCTTSS*EFFTTD
Trigger: ATCTGTAGTGAAAAACTCCCATGAAGAGGTAGTGCA...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCATGCACTACCTCTTCATaGGAGTTTTTCACTACAGAT +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDACTTSS*EFFTTD
Trigger: ATCTGTAGTGAAAAACTCCCATGAAGAGGTAGTGCA...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAATGGCTTCAAAGAATTTaGAAGCAGAAGTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEWLQRI*KQKFWG
Trigger: TCCCCAGAACTTCTGCTTCCAAATTCTTTGAAGCCA...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GAGTCAGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACGCCAGCTTCATGTGCTaGTCCACTGTCTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: ESASNFLGHMTLKETQSHASFMC*STVFNR
Trigger: CCTATTGAAGACAGTGGACCAGCACATGAAGCTGGC...GTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGATGGGACATCTCAATaGATTCTCTGGATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKDGTSQ*ILWIFR
Trigger: ACGGAAAATCCAGAGAATCCATTGAGATGTCCCATC...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGTTTCTCTTGTGCCATaGCCAAGGCATCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SQQLSRTYDTQGNPEPPSVSLVP*PRHLSA
Trigger: TGCACTGAGATGCCTTGGCCATGGCACAAGAGAAAC...CGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTGGCGTAGGACACAGTaGTGGGCATGTCCACTTTGC +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWWRRTQ*WACPLC
Trigger: GCAAAGTGGACATGCCCATCACTGTGTCCTACGCCA...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGGATGTTGCCATTCATaGACTGTGCTGGAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSGCCHS*TVLERE
Trigger: CTCTCTTTCCAGCACAGTTCATGAATGGCAACATCC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCAACCTGGACAGTTTaGGCTGAACAAGTAACTTGG +
Preference number: 4 (lower is better)
Translates to: SQQLSRTYDTQGNPEPPSATWTV*AEQVTW
Trigger: CCAAGTTACTTGTTCAGCTCAAACTGTCCAGGTTGC...CGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGGTGCCAATCTGTTCTaGGCATCCTTCTCTAGTTCA +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSGANLF*ASFSSS
Trigger: TGAACTAGAGAAGGATGCTCAGAACAGATTGGCACC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AGAACATCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTAGAAATCATAGAGCTTaGTGGGACATCTCAATGGAT +
Preference number: 4 (lower is better)
Translates to: RTSFPCGQQSLSAQWKSARNHRA*WDISMD
Trigger: ATCCATTGAGATGTCCCATCAAGCTCTATGATTTCT...AGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGATGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGAGAAATCATAGAGCTTaGTGGGACATCTCAATGGAT +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKRNHRA*WDISMD
Trigger: ATCCATTGAGATGTCCCATCAAGCTCTATGATTTCT...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGGGAATTATTCATATTaGAGAGTCCTTAGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKGNYSY*RVLRVP
Trigger: TGGAACCCTAAGGACTCTGCAATATGAATAATTCCC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000424300.5
CDS-3UTR GCA 90 bp AGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGTGCTGTCTGTGTATATaGAGTTCCCACCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: SQQLSRTYDTQGNPEPPSCCLCI*SSHPVG
Trigger: ACCAACAGGGTGGGAACTGCATATACACAGACAGCA...CGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTGCCACTGACGTGAACTaGGTTGTAGGCTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGATDVN*VVGFLG
Trigger: CCCCAGGAAGCCTACAACGCAGTTCACGTCAGTGGC...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR GCA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCTGGAAAGAGAGAGTTTaGAAGGGTCTGCACTACCTC +
Preference number: 4 (lower is better)
Translates to: LLKMERGHISFHSPSPFPWKERV*KGLHYL
Trigger: GAGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCA...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGAGCCCCAAGCTGCTTaGACTCCCATAGCATCTCCT +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWEPQAA*TPIASP
Trigger: AGGAGATGCTATGGGAGTGCAAGCAGCTTGGGGCTC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGATTTTCCGTCTGTTCTaGATACATGTCATCTGTAAC +
Preference number: 4 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGIFRLF*IHVICN
Trigger: GTTACAGATGACATGTATGCAGAACAGACGGAAAAT...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAACTCTTCAAAGGAGATaGTGTTCTCTAGGGAATTAT +
Preference number: 4 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDATLQRR*CSLGNY
Trigger: ATAATTCCCTAGAGAACACCATCTCCTTTGAAGAGT...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGTGCACTACCTCTTCATaGGAGTTTTTCACTACAGAT +
Preference number: 4 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKCTTSS*EFFTTD
Trigger: ATCTGTAGTGAAAAACTCCCATGAAGAGGTAGTGCA...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTGCTGCGGCTGCTGTTaGGGGTCCCATATATGGACA +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWCCGCC*GSHIWT
Trigger: TGTCCATATATGGGACCCCCAACAGCAGCCGCAGCA...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAATTCCATCTATAGTAGAGCACATCTaGGTCATAGGGTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: WKSAGEIPSRVHPSLIPSIVEHI*VIGFTF
Trigger: GAAGGTGAACCCTATGACCCAGATGTGCTCTACTAT...AGATGGAATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCTCTCTGCTGATAGGCTaGACTGAGTACCAGATTGGG +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLSLLIG*TEYQIG
Trigger: CCCAATCTGGTACTCAGTCCAGCCTATCAGCAGAGA...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTCATTGGCCACTGCGATaGCCTCCTGAATTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSHWPLR*PPEFLL
Trigger: TAAGAGAAATTCAGGAGGCCATCGCAGTGGCCAATG...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCGTTTCTCTTGTGCCATaGCCAAGGCATCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLVSLVP*PRHLSA
Trigger: TGCACTGAGATGCCTTGGCCATGGCACAAGAGAAAC...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGCTGAACACTGGTGGTaGCTGGACAGGCAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWAEHWW*LDRQVQ
Trigger: TTGAACTTGCCTGTCCAGTCACCACCAGTGTTCAGC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp GAGTCAGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATATATGGACAGTTTaGGCCGTATTCTGGTACGTG +
Preference number: 4 (lower is better)
Translates to: ESASNFLGHMTLKETQSHHIWTV*AVFWYV
Trigger: CACGTACCAGAATACGGCTCAAACTGTCCATATATG...GTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR GCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCACCCAGCCACTTCAGTaGTGTCTGTGTATATGCAGT +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLTQPLQ*CLCICS
Trigger: ACTGCATATACACAGACAGCACTGAAGTGGCTGGGT...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCAAGGCCAGCTTCATGTaGTGGTCCACTGTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLKASFM*WSTVFN
Trigger: ATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTT...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTCAGTGCATAGTGCTTaGATTGGCCACTGCGATGGC +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWSVHSA*IGHCDG
Trigger: GCCATCGCAGTGGCCAATGCAAGCACTATGCACTGA...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGCTGGATTTGCTGATGTaGGATGTGCTCCTCCGGGAT +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWLDLLM*DVLLRD
Trigger: ATCCCGGAGGAGCACATCCCACATCAGCAAATCCAG...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GAGTCAGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACACAGCCACTGGAATGTaGATGTTGCCATTCATGAAC +
Preference number: 4 (lower is better)
Translates to: ESASNFLGHMTLKETQSHTATGM*MLPFMN
Trigger: GTTCATGAATGGCAACATCCACATTCCAGTGGCTGT...GTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCTGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTCAATGGATTCTCTaGATTTTCCGTCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEESQWIL*IFRLFC
Trigger: GCAGAACAGACGGAAAATCCAGAGAATCCATTGAGA...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CCA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAAGACTTCTAATATTTTaGGCCTCAAGTAACGGCATT +
Preference number: 4 (lower is better)
Translates to: KETQSHHRLRSLPQQVYERLLIF*ASSNGI
Trigger: AATGCCGTTACTTGAGGCCCAAAATATTAGAAGTCT...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS-3UTR TCA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCCATGTAGCCACTCCGTaGACCGAACATAATAAAGAT +
Preference number: 4 (lower is better)
Translates to: LLKMERGHISFHSPSPFPHVATP*TEHNKD
Trigger: ATCTTTATTATGTTCGGTTCACGGAGTGGCTACATG...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGACTGCGATGGCCTCCTaGATTTCTCTTATCACCAGG +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWTAMAS*ISLITR
Trigger: CCTGGTGATAAGAGAAATTCAGGAGGCCATCGCAGT...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTGCTTGCATTGGCCACTaGGATGGCCTCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGACIGH*DGLLNF
Trigger: GAAATTCAGGAGGCCATCGCAGTGGCCAATGCAAGC...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR CCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCACAGCCACTGGAATGTaGATGTTGCCATTCATGAAC +
Preference number: 4 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLTATGM*MLPFMN
Trigger: GTTCATGAATGGCAACATCCACATTCCAGTGGCTGT...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTGAGATGAGATCTTCCTaGAATCGCAGCAGTTGGCGC +
Preference number: 4 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGEMRSS*NRSSWR
Trigger: GCGCCAACTGCTGCGATTCCAGGAAGATCTCATCTC...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR CCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGCCAGCTTCATGTGCTaGTCCACTGTCTTCAATAGG +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWASFMC*STVFNR
Trigger: CCTATTGAAGACAGTGGACCAGCACATGAAGCTGGC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTTCATCTGTAACTTTCTaGCCAGTCTGGTGTATTCCA +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSSSVTF*PVWCIP
Trigger: TGGAATACACCAGACTGGCCAGAAAGTTACAGATGA...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTTCTCAATGGATTCTCTaGATTTTCCGTCTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSSQWIL*IFRLFC
Trigger: GCAGAACAGACGGAAAATCCAGAGAATCCATTGAGA...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp GAGTCAGCCAGCAACTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACGATGGGACATCTCAATaGATTCTCTGGATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: ESASNFLGHMTLKETQSHDGTSQ*ILWIFR
Trigger: ACGGAAAATCCAGAGAATCCATTGAGATGTCCCATC...GTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAGTTGCTGGCTGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR TCA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTACTGCGATGGCCTCCTaGATTTCTCTTATCACCAGG +
Preference number: 4 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGTAMAS*ISLITR
Trigger: CCTGGTGATAAGAGAAATTCAGGAGGCCATCGCAGT...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR GCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTGCTGTCTGTGTATATaGAGTTCCCACCCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWCCLCI*SSHPVG
Trigger: ACCAACAGGGTGGGAACTGCATATACACAGACAGCA...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR GCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGAAGGCCAGCTTCATGTaGTGGTCCACTGTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWKASFM*WSTVFN
Trigger: ATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTT...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTACTCTTCAAAGGAGATaGTGTTCTCTAGGGAATTAT +
Preference number: 4 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSTLQRR*CSLGNY
Trigger: ATAATTCCCTAGAGAACACCATCTCCTTTGAAGAGT...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTAACACTGGTGGTGACTaGACAGGCAAGTTCAAGCAA +
Preference number: 4 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGNTGGD*TGKFKQ
Trigger: TTGCTTGAACTTGCCTGTCCAGTCACCACCAGTGTT...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR CCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTGGCTTCAAAGAATTTaGAAGCAGAAGTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWWLQRI*KQKFWG
Trigger: TCCCCAGAACTTCTGCTTCCAAATTCTTTGAAGCCA...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGATGGGACATCTCAATaGATTCTCTGGATTTTCCGT +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWDGTSQ*ILWIFR
Trigger: ACGGAAAATCCAGAGAATCCATTGAGATGTCCCATC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR TCA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTCATGTAGCCACTCCGTaGACCGAACATAATAAAGAT +
Preference number: 4 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGHVATP*TEHNKD
Trigger: ATCTTTATTATGTTCGGTTCACGGAGTGGCTACATG...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR GCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGGGAATTATTCATATTaGAGAGTCCTTAGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWGNYSY*RVLRVP
Trigger: TGGAACCCTAAGGACTCTGCAATATGAATAATTCCC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000424300.5
CDS-3UTR GCA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGATTTTCCGTCTGTTCTaGATACATGTCATCTGTAAC +
Preference number: 4 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWIFRLF*IHVICN
Trigger: GTTACAGATGACATGTATGCAGAACAGACGGAAAAT...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CCA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTACTCTTCAAAGGAGATaGTGTTCTCTAGGGAATTAT +
Preference number: 4 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGTLQRR*CSLGNY
Trigger: ATAATTCCCTAGAGAACACCATCTCCTTTGAAGAGT...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS GCA 90 bp CAGCGCAACGAGCCGCGGCCGGCCCTCTGCTCAGCAGAAGCCTCCTaGGCGCTCTCGAGGCAGCACCGCCACCCGATATCAGAGCGCGCG +
Preference number: 5 (lower is better)
Translates to: QRNEPRPALCSAEAS*ALSRQHRHPISERA
Trigger: CGCGCGCTCTGATATCGGGTGGCGGTGCTGCCTCGAGAGCGCGCAGGAGGCTTCTGCTGAGCAGAGGGCCGGCCGCGGCTCGTTGCGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS GCA 90 bp CCCAATCCTCAACCTTCCCAGCGCAACGAGCCGCGGCCGGCCCTCTaGTCAGCAGAAGCCTCCTGCGCGCTCTCGAGGCAGCACCGCCAC +
Preference number: 5 (lower is better)
Translates to: PNPQPSQRNEPRPAL*SAEASCALSRQHRH
Trigger: GTGGCGGTGCTGCCTCGAGAGCGCGCAGGAGGCTTCTGCTGAGCAGAGGGCCGGCCGCGGCTCGTTGCGCTGGGAAGGTTGAGGATTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS GCA 90 bp GCTTGTCCTGAGTTCTTAAGACTTCTAATATTCCGGCGACGTCACTaGCGCCGCCGCCGCCGCCTCCGCTGCACCCGCCGGCCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: ACPEFLRLLIFRRRH*RRRRRLRCTRRPRR
Trigger: GCGGCGGGGCCGGCGGGTGCAGCGGAGGCGGCGGCGGCGGCGGCAGTGACGTCGCCGGAATATTAGAAGTCTTAAGAACTCAGGACAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000430979.1
CDS GCA 90 bp CAAAACTGGGGGTCGTCACGGGCGCGCGCTCCAGAAAGCCGCGGTTaGCCACGGGCCACAGCTCCTAGAGCAGAGATATCCGGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: QNWGSSRARAPESRG*PRATAPRAEISGPG
Trigger: TCCCGGCCCGGATATCTCTGCTCTAGGAGCTGTGGCCCGTGGGCAACCGCGGCTTTCTGGAGCGCGCGCCCGTGACGACCCCCAGTTTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS GCA 90 bp GCATGTCCACTTTGCGCTTCTTCACTGGTTGGAGGACACTGGCCGTaGCAACCCGCCGCTCCCCTTCCCGGGGTGAGCCCTGCTGGGATG +
Preference number: 5 (lower is better)
Translates to: ACPLCASSLVGGHWP*QPAAPLPGVSPAGM
Trigger: CATCCCAGCAGGGCTCACCCCGGGAAGGGGAGCGGCGGGTTGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGCAAAGTGGACATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 90 bp GGGACTGGGACTCTGCAGAGACGGGGTCTGAATGGAGGGGGCTGCTaGCTGTGGTGCCTGGCCTTGGATCTGCACCTGGACCTGGATGGG +
Preference number: 5 (lower is better)
Translates to: GTGTLQRRGLNGGGC*LWCLALDLHLDLDG
Trigger: CCCATCCAGGTCCAGGTGCAGATCCAAGGCCAGGCACCACAGTCAGCAGCCCCCTCCATTCAGACCCCGTCTCTGCAGAGTCCCAGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 90 bp GCTGCTTGCAGCTGCGAGGGACTGGGACTCTGCAGAGACGGGGTCTaGATGGAGGGGGCTGCTGACTGTGGTGCCTGGCCTTGGATCTGC +
Preference number: 5 (lower is better)
Translates to: AACSCEGLGLCRDGV*MEGAADCGAWPWIC
Trigger: GCAGATCCAAGGCCAGGCACCACAGTCAGCAGCCCCCTCCATTCAGACCCCGTCTCTGCAGAGTCCCAGTCCCTCGCAGCTGCAAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 90 bp CCCCTCACAGAGGAGCGGAACCGCAAGCCAGACAGCAAAGCTGGTTaGTTTCTCTCCAGGCCGAGGCCACGGATGCCCGGGAACGTCACC +
Preference number: 5 (lower is better)
Translates to: PLTEERNRKPDSKAG*FLSRPRPRMPGNVT
Trigger: GGTGACGTTCCCGGGCATCCGTGGCCTCGGCCTGGAGAGAAACCAACCAGCTTTGCTGTCTGGCTTGCGGTTCCGCTCCTCTGTGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS TCA 90 bp CTGCTGGCCCTGTGGAATGGCCAGCACGGTGGCCACCGGCTGCCCTaGGATGGCGTAGGACACAGTGATGGGCATGTCCACTTTGCGCTT +
Preference number: 5 (lower is better)
Translates to: LLALWNGQHGGHRLP*DGVGHSDGHVHFAL
Trigger: AAGCGCAAAGTGGACATGCCCATCACTGTGTCCTACGCCATCTCAGGGCAGCCGGTGGCCACCGTGCTGGCCATTCCACAGGGCCAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS GCA 90 bp CTGGATCTGCTGGGCTGCTTGCACGTGCTGCACCTGGATCTGAGCTaGTTGCAGCTGCGAGGGACTGGGACTCTGCAGAGACGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LDLLGCLHVLHLDLS*LQLRGTGTLQRRGL
Trigger: CAGACCCCGTCTCTGCAGAGTCCCAGTCCCTCGCAGCTGCAAGCAGCTCAGATCCAGGTGCAGCACGTGCAAGCAGCCCAGCAGATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 90 bp CTTGCAGCTGCGAGGGACTGGGACTCTGCAGAGACGGGGTCTGAATaGAGGGGGCTGCTGACTGTGGTGCCTGGCCTTGGATCTGCACCT +
Preference number: 5 (lower is better)
Translates to: LAAARDWDSAETGSE*RGLLTVVPGLGSAP
Trigger: AGGTGCAGATCCAAGGCCAGGCACCACAGTCAGCAGCCCCCTCCATTCAGACCCCGTCTCTGCAGAGTCCCAGTCCCTCGCAGCTGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 90 bp GCACGTGCTGCACCTGGATCTGAGCTGCTTGCAGCTGCGAGGGACTaGGACTCTGCAGAGACGGGGTCTGAATGGAGGGGGCTGCTGACT +
Preference number: 5 (lower is better)
Translates to: ARAAPGSELLAAARD*DSAETGSEWRGLLT
Trigger: AGTCAGCAGCCCCCTCCATTCAGACCCCGTCTCTGCAGAGTCCCAGTCCCTCGCAGCTGCAAGCAGCTCAGATCCAGGTGCAGCACGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 90 bp GGCGTAGGACACAGTGATGGGCATGTCCACTTTGCGCTTCTTCACTaGTTGGAGGACACTGGCCGTGCCAACCCGCCGCTCCCCTTCCCG +
Preference number: 5 (lower is better)
Translates to: GVGHSDGHVHFALLH*LEDTGRANPPLPFP
Trigger: CGGGAAGGGGAGCGGCGGGTTGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCATCACTGTGTCCTACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCATCCAGAAAGCCGCGGTaGCCCACGGGCCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: YDTQGNPEPPSAEESAAASRKPR*PTGHSS
Trigger: GGAGCTGTGGCCCGTGGGCAACCGCGGCTTTCTGGA...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS TCA 90 bp CCAGCACGGTGGCCACCGGCTGCCCTGAGATGGCGTAGGACACAGTaGTGGGCATGTCCACTTTGCGCTTCTTCACTGGTTGGAGGACAC +
Preference number: 5 (lower is better)
Translates to: PARWPPAALRWRRTQ*WACPLCASSLVGGH
Trigger: GTGTCCTCCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCATCACTGTGTCCTACGCCATCTCAGGGCAGCCGGTGGCCACCGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS GCA 90 bp TGGGATGTGCTCCTCCGGGATTTCTGCAGCCTGGATCTGCTGGGCTaGTTGCACGTGCTGCACCTGGATCTGAGCTGCTTGCAGCTGCGA +
Preference number: 5 (lower is better)
Translates to: WDVLLRDFCSLDLLG*LHVLHLDLSCLQLR
Trigger: TCGCAGCTGCAAGCAGCTCAGATCCAGGTGCAGCACGTGCAAGCAGCCCAGCAGATCCAGGCTGCAGAAATCCCGGAGGAGCACATCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAGATCTGCTGGGCTGCTaGCACGTGCTGCACCTGGAT +
Preference number: 5 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPDLLGC*HVLHLD
Trigger: ATCCAGGTGCAGCACGTGCAAGCAGCCCAGCAGATC...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp TCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCTACCAGATTGGGCTGTaGGGGGCCACCACTGGCTCA +
Preference number: 5 (lower is better)
Translates to: SVSPVEVGWGDSLQGPSIYQIGL*GATTGS
Trigger: TGAGCCAGTGGTGGCCCCCAACAGCCCAATCTGGTA...GATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAGGACTGAGTACCAGATaGGGCTGTTGGGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPGLSTR*GCWGPP
Trigger: TGGTGGCCCCCAACAGCCCAATCTGGTACTCAGTCC...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS CCA 90 bp CTGGACCTGGATGGGTTGCTCAGTAGGCTGGTGAACGGTGAGTTGTaGGGAGAGCTGAGCCGAGACCTGTTGCGGAGACTGCTGTACCTG +
Preference number: 5 (lower is better)
Translates to: LDLDGLLSRLVNGEL*GELSRDLLRRLLYL
Trigger: CAGGTACAGCAGTCTCCGCAACAGGTCTCGGCTCAGCTCTCCCCACAACTCACCGTTCACCAGCCTACTGAGCAACCCATCCAGGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCACTGGAATCGCAGCAGTaGGCGCCTCCCAATGGGTGC +
Preference number: 5 (lower is better)
Translates to: YDTQGNPEPPSAEESAAALESQQ*APPNGC
Trigger: GCACCCATTGGGAGGCGCCAACTGCTGCGATTCCAG...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 90 bp CCGCGTCAGCATTTGTCCCATCTGCTCTCTGCTGATAGGCTGGACTaGGTACCAGATTGGGCTGTTGGGGGCCACCACTGGCTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: PRQHLSHLLSADRLD*VPDWAVGGHHWLRC
Trigger: ACACCTGAGCCAGTGGTGGCCCCCAACAGCCCAATCTGGTACTCAGTCCAGCCTATCAGCAGAGAGCAGATGGGACAAATGCTGACGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS GCA 90 bp CAGACAGCAAAGCTGGTTGGTTTCTCTCCAGGCCGAGGCCACGGATaGCCGGGAACGTCACCAGACCAGAAAGGACCCAATCCTCAACCT +
Preference number: 5 (lower is better)
Translates to: QTAKLVGFSPGRGHG*PGTSPDQKGPNPQP
Trigger: AGGTTGAGGATTGGGTCCTTTCTGGTCTGGTGACGTTCCCGGGCATCCGTGGCCTCGGCCTGGAGAGAAACCAACCAGCTTTGCTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS-3UTR CAA 90 bp TCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCTTCCTTCATCCTGTGTaGCGGGACAGACCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SVSPVEVGWGDSLQGPSIFLHPV*RDRPCL
Trigger: AAGGCACGGTCTGTCCCGCAACACAGGATGAAGGAA...GATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCACTGAGCCGAGACCTGTaGCGGAGACTGCTGTACCTG +
Preference number: 5 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDALSRDL*RRLLYL
Trigger: CAGGTACAGCAGTCTCCGCAACAGGTCTCGGCTCAG...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCTGTGGTGCCTGGCCTaGGATCTGCACCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDLWCLA*DLHLDL
Trigger: CAGGTCCAGGTGCAGATCCAAGGCCAGGCACCACAG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAATCTGGATCTGAGCTGCTaGCAGCTGCGAGGGACTGGG +
Preference number: 5 (lower is better)
Translates to: SPVEVGWGDSLQGPSIINLDLSC*QLRGTG
Trigger: CCCAGTCCCTCGCAGCTGCAAGCAGCTCAGATCCAG...ATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGCTGGATCTGAGCTGCTaGCAGCTGCGAGGGACTGGG +
Preference number: 5 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKLDLSC*QLRGTG
Trigger: CCCAGTCCCTCGCAGCTGCAAGCAGCTCAGATCCAG...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGATCTGCTGGGCTGCTaGCACGTGCTGCACCTGGAT +
Preference number: 5 (lower is better)
Translates to: YDTQGNPEPPSAEESAAADLLGC*HVLHLD
Trigger: ATCCAGGTGCAGCACGTGCAAGCAGCCCAGCAGATC...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCGCTTCTTCACTGGTaGGAGGACACTGGCCGTGCC +
Preference number: 5 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDALLHW*EDTGRA
Trigger: GGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGC...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGCGCTTCTTCACTGGTaGGAGGACACTGGCCGTGCC +
Preference number: 5 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKALLHW*EDTGRA
Trigger: GGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp ACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCACTGTTCCTGGGGAGTTaGCTGCTGCGGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: TQSHHRLRSLPQQVYEDALFLGS*LLRLLL
Trigger: CAACAGCAGCCGCAGCAGCAAACTCCCCAGGAACAG...TGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCGTCTGTCGCAAGACCTaGGAGAAGGCCAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: SVSPVEVGWGDSLQGPSIVCRKT*EKASFM
Trigger: CATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGAC...GATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS TCA 90 bp CTTCTCCTTGTCATCCTCCAGCTTAACAGCTGCCAGGGCTGTGGGTaGGCCACTGACGTGAACTGCGTTGTAGGCTTCCTGGGGAATGGC +
Preference number: 5 (lower is better)
Translates to: LLLVILQLNSCQGCG*ATDVNCVVGFLGNG
Trigger: GCCATTCCCCAGGAAGCCTACAACGCAGTTCACGTCAGTGGCTCACCCACAGCCCTGGCAGCTGTTAAGCTGGAGGATGACAAGGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 90 bp AGGATCCGCGTCAGCATTTGTCCCATCTGCTCTCTGCTGATAGGCTaGACTGAGTACCAGATTGGGCTGTTGGGGGCCACCACTGGCTCA +
Preference number: 5 (lower is better)
Translates to: RIRVSICPICSLLIG*TEYQIGLLGATTGS
Trigger: TGAGCCAGTGGTGGCCCCCAACAGCCCAATCTGGTACTCAGTCCAGCCTATCAGCAGAGAGCAGATGGGACAAATGCTGACGCGGATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS-3UTR CAA 90 bp AGAACATCGTTCCCCTGTGGTCAGCAAAGTCTGTCAGCCCAGTGGAAGTCGGCTCTGAGCCGAGACCTGTaGCGGAGACTGCTGTACCTG +
Preference number: 5 (lower is better)
Translates to: RTSFPCGQQSLSAQWKSALSRDL*RRLLYL
Trigger: CAGGTACAGCAGTCTCCGCAACAGGTCTCGGCTCAG...AGCCGACTTCCACTGGGCTGACAGACTTTGCTGACCACAGGGGAACGATGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGCTGGTGAACGGTGAGTaGTGGGGAGAGCTGAGCCGA +
Preference number: 5 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKLVNGE*WGELSR
Trigger: TCGGCTCAGCTCTCCCCACAACTCACCGTTCACCAG...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACTGGTGAACGGTGAGTaGTGGGGAGAGCTGAGCCGA +
Preference number: 5 (lower is better)
Translates to: KETQSHHRLRSLPQQVYELVNGE*WGELSR
Trigger: TCGGCTCAGCTCTCCCCACAACTCACCGTTCACCAG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCACTGGACCTGGATGGGTaGCTCAGTAGGCTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: YDTQGNPEPPSAEESAAALDLDG*LSRLVN
Trigger: GTTCACCAGCCTACTGAGCAACCCATCCAGGTCCAG...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGATCTGCTGGGCTGCTaGCACGTGCTGCACCTGGAT +
Preference number: 5 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKDLLGC*HVLHLD
Trigger: ATCCAGGTGCAGCACGTGCAAGCAGCCCAGCAGATC...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAACCCACGGTCTGGATTaGGATCTGCTGACCACCAGC +
Preference number: 5 (lower is better)
Translates to: SAQWKSAGEIPSRVHPSLTHGLD*DLLTTS
Trigger: GCTGGTGGTCAGCAGATCCAAATCCAGACCGTGGGT...TAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGCTGCTGCGGCTGCTGTaGGGGGTCCCATATATGGAC +
Preference number: 5 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKLLRLL*GVPYMD
Trigger: GTCCATATATGGGACCCCCAACAGCAGCCGCAGCAG...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGCTGTTCCTGGGGAGTTaGCTGCTGCGGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: QSHHRLRSLPQQVYEDAKLFLGS*LLRLLL
Trigger: CAACAGCAGCCGCAGCAGCAAACTCCCCAGGAACAG...CTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGGACTGAGTACCAGATaGGGCTGTTGGGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKGLSTR*GCWGPP
Trigger: TGGTGGCCCCCAACAGCCCAATCTGGTACTCAGTCC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 90 bp TGTCTGCTGGAACTCCTGAAGGGCTTCTGGCCCCTTAGAGGCCAGTaGGTCCAGAAATTCCTTCATCCTGTGTTGCGGGACAGACCGTGC +
Preference number: 5 (lower is better)
Translates to: CLLELLKGFWPLRGQ*VQKFLHPVLRDRPC
Trigger: GCACGGTCTGTCCCGCAACACAGGATGAAGGAATTTCTGGACTCACTGGCCTCTAAGGGGCCAGAAGCCCTTCAGGAGTTCCAGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000430979.1
ENST00000437939.5
ENST00000450685.5
CDS TCA 90 bp CCCTGTTGGTACACCATGGTAGTGGTGGCTGTCTGCTGGAACTCCTaGAGGGCTTCTGGCCCCTTAGAGGCCAGTGAGTCCAGAAATTCC +
Preference number: 5 (lower is better)
Translates to: PCWYTMVVVAVCWNS*RASGPLEASESRNS
Trigger: GGAATTTCTGGACTCACTGGCCTCTAAGGGGCCAGAAGCCCTTCAGGAGTTCCAGCAGACAGCCACCACTACCATGGTGTACCAACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000437939.5
ENST00000450685.5
CDS GCA 90 bp ACAGGCACAAGGGCAGGACAGGGCAGGACAAGTAGCACCTGTTTTTaGCATCCCTGCCTCCTTTCCCTACCTTTCTGGCCAGTCTGGTGT +
Preference number: 5 (lower is better)
Translates to: TGTRAGQGRTSSTCF*HPCLLSLPFWPVWC
Trigger: ACACCAGACTGGCCAGAAAGGTAGGGAAAGGAGGCAGGGATGGCAAAAACAGGTGCTACTTGTCCTGCCCTGTCCTGCCCTTGTGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS CCA 90 bp GCCCAACTAGGAAATACAGGGTCGGGGGAGGGAAGGTATGAGGCATaGGCAGTGACTACTAAGGGAAGAGGCAGCTATTCTGTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: AQLGNTGSGEGRYEA*AVTTKGRGSYSVWG
Trigger: GCCCCAGACAGAATAGCTGCCTCTTCCCTTAGTAGTCACTGCCCATGCCTCATACCTTCCCTCCCCCGACCCTGTATTTCCTAGTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS-3UTR CAA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGTTCCTTCATCCTGTGTaGCGGGACAGACCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGFLHPV*RDRPCL
Trigger: AAGGCACGGTCTGTCCCGCAACACAGGATGAAGGAA...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACTGGACCTGGATGGGTaGCTCAGTAGGCTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: KETQSHHRLRSLPQQVYELDLDG*LSRLVN
Trigger: GTTCACCAGCCTACTGAGCAACCCATCCAGGTCCAG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGCTGTGGTGCCTGGCCTaGGATCTGCACCTGGACCTG +
Preference number: 5 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEELWCLA*DLHLDL
Trigger: CAGGTCCAGGTGCAGATCCAAGGCCAGGCACCACAG...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGACCCACGGTCTGGATTaGGATCTGCTGACCACCAGC +
Preference number: 5 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKTHGLD*DLLTTS
Trigger: GCTGGTGGTCAGCAGATCCAAATCCAGACCGTGGGT...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAATTCCTTCATCCTGTGTaGCGGGACAGACCGTGCCTT +
Preference number: 5 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEFLHPV*RDRPCL
Trigger: AAGGCACGGTCTGTCCCGCAACACAGGATGAAGGAA...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAGTTCCCACCCTGTaGGTACACCATGGTAGTGGT +
Preference number: 5 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDAVPTL*VHHGSG
Trigger: ACCACTACCATGGTGTACCAACAGGGTGGGAACTGC...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCCTGGATCTGAGCTGCTaGCAGCTGCGAGGGACTGGG +
Preference number: 5 (lower is better)
Translates to: LLKMERGHISFHSPSPFPLDLSC*QLRGTG
Trigger: CCCAGTCCCTCGCAGCTGCAAGCAGCTCAGATCCAG...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp CTCTTGAAGATGGAAAGGGGCCACATTTCTTTTCACAGTCCAAGCCCTTTCCCCGCGCTTCTTCACTGGTaGGAGGACACTGGCCGTGCC +
Preference number: 5 (lower is better)
Translates to: LLKMERGHISFHSPSPFPALLHW*EDTGRA
Trigger: GGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGC...GGGGAAAGGGCTTGGACTGTGAAAAGAAATGTGGCCCCTTTCCATCTTCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCTAGTTCAGCATTCTaGGTCTGGGCCCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPSSSAF*VWAQFF
Trigger: GAAAAACTGGGCCCAGACCAAGAATGCTGAACTAGA...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTCTGGAATCGCAGCAGTaGGCGCCTCCCAATGGGTGC +
Preference number: 5 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSLESQQ*APPNGC
Trigger: GCACCCATTGGGAGGCGCCAACTGCTGCGATTCCAG...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGGTCTGTCGCAAGACCTaGGAGAAGGCCAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKVCRKT*EKASFM
Trigger: CATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGAC...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAATTCCATCTTACCAGATTGGGCTGTaGGGGGCCACCACTGGCTCA +
Preference number: 5 (lower is better)
Translates to: WKSAGEIPSRVHPSLIPSYQIGL*GATTGS
Trigger: TGAGCCAGTGGTGGCCCCCAACAGCCCAATCTGGTA...AGATGGAATTAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS TCA 90 bp CCTGGATCTGCTGTTCTTGCTGGGTTTGTGGCTGAACACTGGTGGTaGCTGGACAGGCAAGTTCAAGCAAAGACCCAGCCACTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: PGSAVLAGFVAEHWW*LDRQVQAKTQPLQC
Trigger: GCACTGAAGTGGCTGGGTCTTTGCTTGAACTTGCCTGTCCAGTCACCACCAGTGTTCAGCCACAAACCCAGCAAGAACAGCAGATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000437939.5
ENST00000450685.5
CDS GCA 90 bp GTTGGGGGTCCCATATATGGACAGTTTGAGCCGTATTCTGGTACGTaGCTGCCACAGCCTGCACAGCCACTGGAATGTGGATGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: VGGPIYGQFEPYSGT*LPQPAQPLECGCCH
Trigger: ATGGCAACATCCACATTCCAGTGGCTGTGCAGGCTGTGGCAGGCACGTACCAGAATACGGCTCAAACTGTCCATATATGGGACCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS GCA 90 bp TGCCATGGCCAAGGCATCTCAGTGCATAGTGCTTGCATTGGCCACTaGGATGGCCTCCTGAATTTCTCTTATCACCAGGATCCGCGTCAG +
Preference number: 5 (lower is better)
Translates to: CHGQGISVHSACIGH*DGLLNFSYHQDPRQ
Trigger: CTGACGCGGATCCTGGTGATAAGAGAAATTCAGGAGGCCATCGCAGTGGCCAATGCAAGCACTATGCACTGAGATGCCTTGGCCATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS CCA 90 bp AGGCCAGCTTCATGTGCTGGTCCACTGTCTTCAATAGGAAGTACCTaGATCACAAGTAAAATGCAAGGCAGAGGGAGGGGTGCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: RPASCAGPLSSIGST*ITSKMQGRGRGAGR
Trigger: CCTCCCGGCACCCCTCCCTCTGCCTTGCATTTTACTTGTGATCCAGGTACTTCCTATTGAAGACAGTGGACCAGCACATGAAGCTGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489642.5
ENST00000498392.1
CDS-3UTR CAA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCTGTTCTTGCTGGGTTaGTGGCTGAACACTGGTGGT +
Preference number: 5 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDLFLLG*WLNTGG
Trigger: ACCACCAGTGTTCAGCCACAAACCCAGCAAGAACAG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACTGGATCTGCTGTTCTaGCTGGGTTTGTGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: KETQSHHRLRSLPQQVYELDLLF*LGLWLN
Trigger: GTTCAGCCACAAACCCAGCAAGAACAGCAGATCCAG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGCTGGATCTGCTGTTCTaGCTGGGTTTGTGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKLDLLF*LGLWLN
Trigger: GTTCAGCCACAAACCCAGCAAGAACAGCAGATCCAG...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTCTGAGCCGAGACCTGTaGCGGAGACTGCTGTACCTG +
Preference number: 5 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSLSRDL*RRLLYL
Trigger: CAGGTACAGCAGTCTCCGCAACAGGTCTCGGCTCAG...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATATGGGCATGTCCACTTaGCGCTTCTTCACTGGTTGG +
Preference number: 5 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDMGMST*RFFTGW
Trigger: CCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCAT...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGCTGGAAAGAGAGAGTTaGCAAGGGTCTGCACTACCT +
Preference number: 5 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGLERES*QGSALP
Trigger: AGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCAG...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AGTCTGTCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCAACTGGAATGTGGATGTaGCCATTCATGAACTGTGCT +
Preference number: 5 (lower is better)
Translates to: SLSAQWKSAGEIPSRVHPTGMWM*PFMNCA
Trigger: AGCACAGTTCATGAATGGCAACATCCACATTCCAGT...TGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGACAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTCTGCTGCGGCTGCTGTaGGGGGTCCCATATATGGAC +
Preference number: 5 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSLLRLL*GVPYMD
Trigger: GTCCATATATGGGACCCCCAACAGCAGCCGCAGCAG...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGGATCCGCGTCAGCATTaGTCCCATCTGCTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LGHMTLKETQSHHRLRSLDPRQH*SHLLSA
Trigger: AGCAGAGAGCAGATGGGACAAATGCTGACGCGGATC...CAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGCCTGGCTGGTTTCTCTaGTGCCATGGCCAAGGCATC +
Preference number: 5 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEEPGWFL*CHGQGI
Trigger: GATGCCTTGGCCATGGCACAAGAGAAACCAGCCAGG...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS TCA 90 bp TGGAATCGCAGCAGTTGGCGCCTCCCAATGGGTGCCAATCTGTTCTaGGCATCCTTCTCTAGTTCAGCATTCTTGGTCTGGGCCCAGTTT +
Preference number: 5 (lower is better)
Translates to: WNRSSWRLPMGANLF*ASFSSSAFLVWAQF
Trigger: AAACTGGGCCCAGACCAAGAATGCTGAACTAGAGAAGGATGCTCAGAACAGATTGGCACCCATTGGGAGGCGCCAACTGCTGCGATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS GCA 90 bp GGCCCCTTAGAGGCCAGTGAGTCCAGAAATTCCTTCATCCTGTGTTaGGGGACAGACCGTGCCTTTACTCGGATGTACTCTTCAAAGGAG +
Preference number: 5 (lower is better)
Translates to: GPLEASESRNSFILC*GTDRAFTRMYSSKE
Trigger: CTCCTTTGAAGAGTACATCCGAGTAAAGGCACGGTCTGTCCCGCAACACAGGATGAAGGAATTTCTGGACTCACTGGCCTCTAAGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000430979.1
ENST00000437939.5
ENST00000450685.5
CDS GCA 90 bp GGGGTCCCATATATGGACAGTTTGAGCCGTATTCTGGTACGTGCCTaGCACAGCCTGCACAGCCACTGGAATGTGGATGTTGCCATTCAT +
Preference number: 5 (lower is better)
Translates to: GVPYMDSLSRILVRA*HSLHSHWNVDVAIH
Trigger: ATGAATGGCAACATCCACATTCCAGTGGCTGTGCAGGCTGTGGCAGGCACGTACCAGAATACGGCTCAAACTGTCCATATATGGGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS GCA 90 bp TGTACTCTTCAAAGGAGATGGTGTTCTCTAGGGAATTATTCATATTaGAGAGTCCTTAGGGTTCCCGGCGACGTCACTGCCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: CTLQRRWCSLGNYSY*RVLRVPGDVTAAAA
Trigger: GGCGGCGGCGGCAGTGACGTCGCCGGGAACCCTAAGGACTCTGCAATATGAATAATTCCCTAGAGAACACCATCTCCTTTGAAGAGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS CCA 90 bp GATCTGCTGTTCTTGCTGGGTTTGTGGCTGAACACTGGTGGTGACTaGACAGGCAAGTTCAAGCAAAGACCCAGCCACTTCAGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: DLLFLLGLWLNTGGD*TGKFKQRPSHFSAV
Trigger: GACAGCACTGAAGTGGCTGGGTCTTTGCTTGAACTTGCCTGTCCAGTCACCACCAGTGTTCAGCCACAAACCCAGCAAGAACAGCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000437939.5
ENST00000450685.5
CDS CCA 90 bp CCCCAAGCTGCTTGCACTCCCATAGCATCTCCTCAGTCACGTGGCTaGGCAAGACATAGCCTAGGAGGAATAGAGTACTGTCACAACAAG +
Preference number: 5 (lower is better)
Translates to: PQAACTPIASPQSRG*ARHSLGGIEYCHNK
Trigger: CTTGTTGTGACAGTACTCTATTCCTCCTAGGCTATGTCTTGCCCAGCCACGTGACTGAGGAGATGCTATGGGAGTGCAAGCAGCTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS-3UTR CAA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCCTGCTGCGGCTGCTGTaGGGGGTCCCATATATGGAC +
Preference number: 5 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLLLRLL*GVPYMD
Trigger: GTCCATATATGGGACCCCCAACAGCAGCCGCAGCAG...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCATCTAGTTCAGCATTCTaGGTCTGGGCCCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: YDTQGNPEPPSAEESAAASSSAF*VWAQFF
Trigger: GAAAAACTGGGCCCAGACCAAGAATGCTGAACTAGA...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCACTCGTGCTTTTATCCTaGGGATTAGAGGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: YDTQGNPEPPSAEESAAALVLLS*GLEGFF
Trigger: GAAGAACCCCTCTAATCCCAAGGATAAAAGCACGAG...TGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCTACCAGATTGGGCTGTaGGGGGCCACCACTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLYQIGL*GATTGS
Trigger: TGAGCCAGTGGTGGCCCCCAACAGCCCAATCTGGTA...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCGGACTGAGTACCAGATaGGGCTGTTGGGGGCCACCA +
Preference number: 5 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLGLSTR*GCWGPP
Trigger: TGGTGGCCCCCAACAGCCCAATCTGGTACTCAGTCC...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 90 bp CTGCCACAGCCTGCACAGCCACTGGAATGTGGATGTTGCCATTCATaGACTGTGCTGGAAAGAGAGAGTTTGCAAGGGTCTGCACTACCT +
Preference number: 5 (lower is better)
Translates to: LPQPAQPLECGCCHS*TVLERESLQGSALP
Trigger: AGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCAGCACAGTTCATGAATGGCAACATCCACATTCCAGTGGCTGTGCAGGCTGTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 90 bp GGCTGTGGCTGTGACTGTGGTTCAACTTCAGCAACCTGGACAGTTTaGGCTGAACAAGTAACTTGGAGTTGCTGCTGCTGCTGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GCGCDCGSTSATWTV*AEQVTWSCCCCCCG
Trigger: ACCACAGCAGCAGCAGCAGCAACTCCAAGTTACTTGTTCAGCTCAAACTGTCCAGGTTGCTGAAGTTGAACCACAGTCACAGCCACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS TCA 90 bp TCATTAGACAGAGCCCATAATTCAACTCTGCCACAGCAGAGGAGATaGGATCTTCCTGGAATCGCAGCAGTTGGCGCCTCCCAATGGGTG +
Preference number: 5 (lower is better)
Translates to: SLDRAHNSTLPQQRR*DLPGIAAVGASQWV
Trigger: CACCCATTGGGAGGCGCCAACTGCTGCGATTCCAGGAAGATCTCATCTCCTCTGCTGTGGCAGAGTTGAATTATGGGCTCTGTCTAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS TCA 90 bp GCATCTCAGTGCATAGTGCTTGCATTGGCCACTGCGATGGCCTCCTaGATTTCTCTTATCACCAGGATCCGCGTCAGCATTTGTCCCATC +
Preference number: 5 (lower is better)
Translates to: ASQCIVLALATAMAS*ISLITRIRVSICPI
Trigger: GATGGGACAAATGCTGACGCGGATCCTGGTGATAAGAGAAATTCAGGAGGCCATCGCAGTGGCCAATGCAAGCACTATGCACTGAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS CCA 90 bp AGTAGCACCTGTTTTTGCCATCCCTGCCTCCTTTCCCTACCTTTCTaGCCAGTCTGGTGTATTCCAAGGGCCTTCAAGTACCGGATACTC +
Preference number: 5 (lower is better)
Translates to: SSTCFCHPCLLSLPF*PVWCIPRAFKYRIL
Trigger: GAGTATCCGGTACTTGAAGGCCCTTGGAATACACCAGACTGGCCAGAAAGGTAGGGAAAGGAGGCAGGGATGGCAAAAACAGGTGCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS-3UTR CAA 90 bp TCAGCCCAGTGGAAGTCGGCTGGGGAGATTCCCTCCAGGGTCCATCCATCATTAGTTCCAGTCACCATGTaGCATGTATTTCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SAQWKSAGEIPSRVHPSLVPVTM*HVFLLL
Trigger: AAGCAGCAGAAATACATGCAACATGGTGACTGGAAC...TAATGATGGATGGACCCTGGAGGGAATCTCCCCAGCCGACTTCCACTGGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357496.6
CDS-3UTR CAA 90 bp AGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGTTCCAGTCACCATGTaGCATGTATTTCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SHHRLRSLPQQVYEDAKGVPVTM*HVFLLL
Trigger: AAGCAGCAGAAATACATGCAACATGGTGACTGGAAC...CCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000424300.5
CDS-3UTR CAA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGCTGTTCTTGCTGGGTTaGTGGCTGAACACTGGTGGT +
Preference number: 5 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEELFLLG*WLNTGG
Trigger: ACCACCAGTGTTCAGCCACAAACCCAGCAAGAACAG...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACTGGCTTCAAAGAATTaGGAAGCAGAAGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: KETQSHHRLRSLPQQVYELASKN*EAEVLG
Trigger: CCCCAGAACTTCTGCTTCCAAATTCTTTGAAGCCAG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp GAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATCTGGCTTCAAAGAATTaGGAAGCAGAAGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: ETQSHHRLRSLPQQVYEDLASKN*EAEVLG
Trigger: CCCCAGAACTTCTGCTTCCAAATTCTTTGAAGCCAG...ATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGCTGGAATCGCAGCAGTaGGCGCCTCCCAATGGGTGC +
Preference number: 5 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWLESQQ*APPNGC
Trigger: GCACCCATTGGGAGGCGCCAACTGCTGCGATTCCAG...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACTCGTGCTTTTATCCTaGGGATTAGAGGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: KETQSHHRLRSLPQQVYELVLLS*GLEGFF
Trigger: GAAGAACCCCTCTAATCCCAAGGATAAAAGCACGAG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTGATCCGCGTCAGCATTaGTCCCATCTGCTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSDPRQH*SHLLSA
Trigger: AGCAGAGAGCAGATGGGACAAATGCTGACGCGGATC...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS GCA 90 bp TGGTTTCTCTTGTGCCATGGCCAAGGCATCTCAGTGCATAGTGCTTaGATTGGCCACTGCGATGGCCTCCTGAATTTCTCTTATCACCAG +
Preference number: 5 (lower is better)
Translates to: WFLLCHGQGISVHSA*IGHCDGLLNFSYHQ
Trigger: CTGGTGATAAGAGAAATTCAGGAGGCCATCGCAGTGGCCAATGCAAGCACTATGCACTGAGATGCCTTGGCCATGGCACAAGAGAAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS GCA 90 bp TGTACTCTTCAAAGGAGATGGTGTTCTCTAGGGAATTATTCATATTaGAGAGTCCTTAGGGTTCCCGCACTGGAGCCCTCACCCGGCGAC +
Preference number: 5 (lower is better)
Translates to: CTLQRRWCSLGNYSY*RVLRVPALEPSPGD
Trigger: GTCGCCGGGTGAGGGCTCCAGTGCGGGAACCCTAAGGACTCTGCAATATGAATAATTCCCTAGAGAACACCATCTCCTTTGAAGAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437939.5
CDS CCA 90 bp TTCTTTGTCTGTCGCAAGACCTTGGAGAAGGCCAGCTTCATGTGCTaGTCCACTGTCTTCAATAGGAAGTACCCAAGCAGTGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: FFVCRKTLEKASFMC*STVFNRKYPSSVQC
Trigger: GCACTGGACACTGCTTGGGTACTTCCTATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGACAAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477021.1
CDS-3UTR CAA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGCTGGTGAACGGTGAGTaGTGGGGAGAGCTGAGCCGA +
Preference number: 5 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWLVNGE*WGELSR
Trigger: TCGGCTCAGCTCTCCCCACAACTCACCGTTCACCAG...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CTTTCTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGCTGGAAAGAGAGAGTTaGCAAGGGTCTGCACTACCT +
Preference number: 5 (lower is better)
Translates to: LSRTYDTQGNPEPPSAEELERES*QGSALP
Trigger: AGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCAG...CTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp CATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGACTGGAATGTGGATGTaGCCATTCATGAACTGTGCT +
Preference number: 5 (lower is better)
Translates to: HRLRSLPQQVYEDAKGAKTGMWM*PFMNCA
Trigger: AGCACAGTTCATGAATGGCAACATCCACATTCCAGT...CTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAAACTGGAATGTGGATGTaGCCATTCATGAACTGTGCT +
Preference number: 5 (lower is better)
Translates to: KETQSHHRLRSLPQQVYETGMWM*PFMNCA
Trigger: AGCACAGTTCATGAATGGCAACATCCACATTCCAGT...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCCGCAGCAGGTTTATGAACCATATATGGACAGTTaGAGCCGTATTCTGGTACGT +
Preference number: 5 (lower is better)
Translates to: KETQSHHRLRSLPQQVYEPYMDS*SRILVR
Trigger: ACGTACCAGAATACGGCTCAAACTGTCCATATATGG...TTCATAAACCTGCTGCGGCAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CTAGGACATATGACACTCAAGGAAACCCAGAGCCACCATCGGCTGAGGAGTCTGCTCGTGCTTTTATCCTaGGGATTAGAGGGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LGHMTLKETQSHHRLRSLLVLLS*GLEGFF
Trigger: GAAGAACCCCTCTAATCCCAAGGATAAAAGCACGAG...CAGACTCCTCAGCCGATGGTGGCTCTGGGTTTCCTTGAGTGTCATATGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000395443.7
CDS-3UTR CAA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCGATCCGCGTCAGCATTaGTCCCATCTGCTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLDPRQH*SHLLSA
Trigger: AGCAGAGAGCAGATGGGACAAATGCTGACGCGGATC...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS GCA 90 bp TTCTTCTTTGTCTGTCGCAAGACCTTGGAGAAGGCCAGCTTCATGTaGTGGTCCACTGTCTTCAATAGGAAGTACCCAAGCAGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: FFFVCRKTLEKASFM*WSTVFNRKYPSSVQ
Trigger: CTGGACACTGCTTGGGTACTTCCTATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGACAAAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477021.1
CDS CCA 90 bp CTGCACAGCCACTGGAATGTGGATGTTGCCATTCATGAACTGTGCTaGAAAGAGAGAGTTTGCAAGGGTCTGCACTACCTCTTCATGGGA +
Preference number: 5 (lower is better)
Translates to: LHSHWNVDVAIHELC*KERVCKGLHYLFMG
Trigger: TCCCATGAAGAGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCAGCACAGTTCATGAATGGCAACATCCACATTCCAGTGGCTGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTaGTTTCTCTTGTGCCATGGCCAAGGCATCTCAGTGCATAGTGCT +
Preference number: 5 (lower is better)
Translates to: GGLFFSVKVCLVFPG*FLLCHGQGISVHSA
Trigger: AGCACTATGCACTGAGATGCCTTGGCCATGGCACAAGAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS CCA 90 bp TGTTTTTGCCATCCCTGCCTCCTTTCCCTACCTTTCTGGCCAGTCTaGTGTATTCCAAGGGCCTTCAAGTACCGGATACTCGTGCTTTTA +
Preference number: 5 (lower is better)
Translates to: CFCHPCLLSLPFWPV*CIPRAFKYRILVLL
Trigger: TAAAAGCACGAGTATCCGGTACTTGAAGGCCCTTGGAATACACCAGACTGGCCAGAAAGGTAGGGAAAGGAGGCAGGGATGGCAAAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS CCA 90 bp GAGGCATGGGCAGTGACTACTAAGGGAAGAGGCAGCTATTCTGTCTaGGGCTTCTCTGCTTCTAGGAGGAAAGTTTGGAATTTTTGGCTG +
Preference number: 5 (lower is better)
Translates to: EAWAVTTKGRGSYSV*GFSASRRKVWNFWL
Trigger: CAGCCAAAAATTCCAAACTTTCCTCCTAGAAGCAGAGAAGCCCCAGACAGAATAGCTGCCTCTTCCCTTAGTAGTCACTGCCCATGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS-3UTR CAA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCATGGGCATGTCCACTTaGCGCTTCTTCACTGGTTGG +
Preference number: 5 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLMGMST*RFFTGW
Trigger: CCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCAT...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGCCTGGCTGGTTTCTCTaGTGCCATGGCCAAGGCATC +
Preference number: 5 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWPGWFL*CHGQGI
Trigger: GATGCCTTGGCCATGGCACAAGAGAAACCAGCCAGG...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 90 bp TTAGGGTTCCAGTCACCATGTTGCATGTATTTCTGCTGCTTGTCCTaGGTTCTTAAGACTTCTAATATTCCGGCGACGTCACTGCCGCCG +
Preference number: 5 (lower is better)
Translates to: LGFQSPCCMYFCCLS*VLKTSNIPATSLPP
Trigger: CGGCGGCAGTGACGTCGCCGGAATATTAGAAGTCTTAAGAACTCAGGACAAGCAGCAGAAATACATGCAACATGGTGACTGGAACCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357496.6
CDS CCA 90 bp TGTGCTGGAAAGAGAGAGTTTGCAAGGGTCTGCACTACCTCTTCATaGGAGTTTTTCACTACAGATGTGGTGCCCACCATCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: CAGKREFARVCTTSS*EFFTTDVVPTIFSL
Trigger: CAAGGAGAAGATGGTGGGCACCACATCTGTAGTGAAAAACTCCCATGAAGAGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 90 bp ATGTCATCTGTAACTATAAAACACACATCCCCACCACCACAGACCTaGCATCAGACTGCCTTACCTCAGGCCCAGATCAGGAAACTTAGG +
Preference number: 5 (lower is better)
Translates to: MSSVTIKHTSPPPQT*HQTALPQAQIRKLR
Trigger: CCTAAGTTTCCTGATCTGGGCCTGAGGTAAGGCAGTCTGATGCCAGGTCTGTGGTGGTGGGGATGTGTGTTTTATAGTTACAGATGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS-3UTR CAA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGCAGTTCCCACCCTGTaGGTACACCATGGTAGTGGT +
Preference number: 5 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWAVPTL*VHHGSG
Trigger: ACCACTACCATGGTGTACCAACAGGGTGGGAACTGC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTACCCACGGTCTGGATTaGGATCTGCTGACCACCAGC +
Preference number: 5 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGTHGLD*DLLTTS
Trigger: GCTGGTGGTCAGCAGATCCAAATCCAGACCGTGGGT...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR CAA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTCTGGCTTCAAAGAATTaGGAAGCAGAAGTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSLASKN*EAEVLG
Trigger: CCCCAGAACTTCTGCTTCCAAATTCTTTGAAGCCAG...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGGTCTGTCGCAAGACCTaGGAGAAGGCCAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWVCRKT*EKASFM
Trigger: CATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGAC...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS GCA 90 bp TTGCCATTCATGAACTGTGCTGGAAAGAGAGAGTTTGCAAGGGTCTaGACTACCTCTTCATGGGAGTTTTTCACTACAGATGTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LPFMNCAGKREFARV*TTSSWEFFTTDVVP
Trigger: GGGCACCACATCTGTAGTGAAAAACTCCCATGAAGAGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCAGCACAGTTCATGAATGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTGCAGTTCCCACCCTGTaGGTACACCATGGTAGTGGT +
Preference number: 5 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGAVPTL*VHHGSG
Trigger: ACCACTACCATGGTGTACCAACAGGGTGGGAACTGC...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR CAA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGCTGGATCTGCTGTTCTaGCTGGGTTTGTGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWLDLLF*LGLWLN
Trigger: GTTCAGCCACAAACCCAGCAAGAACAGCAGATCCAG...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp AAAAATGGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGATGGGCATGTCCACTTaGCGCTTCTTCACTGGTTGG +
Preference number: 5 (lower is better)
Translates to: KNGGLFFSVKVCLVFPGWMGMST*RFFTGW
Trigger: CCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCAT...CCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp CTGAGGAGTCTGCCGCAGCAGGTTTATGAAGATGCAAAGGGGGCAAAGTTTTCTCCATATATGGACAGTTaGAGCCGTATTCTGGTACGT +
Preference number: 5 (lower is better)
Translates to: LRSLPQQVYEDAKGAKFSPYMDS*SRILVR
Trigger: ACGTACCAGAATACGGCTCAAACTGTCCATATATGG...AGAAAACTTTGCCCCCTTTGCATCTTCATAAACCTGCTGCGGCAGACTCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS-3UTR CAA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTCTGTTCTTGCTGGGTTaGTGGCTGAACACTGGTGGT +
Preference number: 5 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGLFLLG*WLNTGG
Trigger: ACCACCAGTGTTCAGCCACAAACCCAGCAAGAACAG...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS-3UTR CAA 90 bp GGAGGCCTCTTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCCCATATATGGACAGTTaGAGCCGTATTCTGGTACGT +
Preference number: 5 (lower is better)
Translates to: GGLFFSVKVCLVFPGWFLPYMDS*SRILVR
Trigger: ACGTACCAGAATACGGCTCAAACTGTCCATATATGG...GAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAAGAGGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 90 bp CAAGAGGATGGCAGGTGGTCTCTCAAAGGTACAATATGGGATGTGTaGAGCATAAGGACCACACAGGAGTATAAATTTCATCAGGGGACT +
Preference number: 5 (lower is better)
Translates to: QEDGRWSLKGTIWDV*SIRTTQEYKFHQGT
Trigger: AGTCCCCTGATGAAATTTATACTCCTGTGTGGTCCTTATGCTTCACACATCCCATATTGTACCTTTGAGAGACCACCTGCCATCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS GCA 90 bp AATGTGGATGTTGCCATTCATGAACTGTGCTGGAAAGAGAGAGTTTaGAAGGGTCTGCACTACCTCTTCATGGGAGTTTTTCACTACAGA +
Preference number: 5 (lower is better)
Translates to: NVDVAIHELCWKERV*KGLHYLFMGVFHYR
Trigger: TCTGTAGTGAAAAACTCCCATGAAGAGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCAGCACAGTTCATGAATGGCAACATCCACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS GCA 90 bp TTCTTCTTTGTCTGTCGCAAGACCTTGGAGAAGGCCAGCTTCATGTaGTGGTCCACTGTCTTCAATAGGAAGTACTTGGTATTAAAGAAC +
Preference number: 5 (lower is better)
Translates to: FFFVCRKTLEKASFM*WSTVFNRKYLVLKN
Trigger: GTTCTTTAATACCAAGTACTTCCTATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGACAAAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000469910.1
CDS CCA 90 bp TTCTTTGTCTGTCGCAAGACCTTGGAGAAGGCCAGCTTCATGTGCTaGTCCACTGTCTTCAATAGGAAGTACTTGGTATTAAAGAACATG +
Preference number: 5 (lower is better)
Translates to: FFVCRKTLEKASFMC*STVFNRKYLVLKNM
Trigger: CATGTTCTTTAATACCAAGTACTTCCTATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGACAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000469910.1
CDS-3UTR CAA 90 bp TATGATACACAAGTGTATGTTACAAGAATTCCATCAGGCACAGGAGCCTCAGGTTCTAGTTCAGCATTCTaGGTCTGGGCCCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: YDTQVYVTRIPSGTGASGSSSAF*VWAQFF
Trigger: GAAAAACTGGGCCCAGACCAAGAATGCTGAACTAGA...ACCTGAGGCTCCTGTGCCTGATGGAATTCTTGTAACATACACTTGTGTATCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS TCA 90 bp ATGATGAGCACTTCTAACACCACACTTGAGAACCACAGCCTTACATaGTTGTTGTTACCCTCTAATCCAAGGCTAACACAGGGCAAAAAG +
Preference number: 5 (lower is better)
Translates to: MMSTSNTTLENHSLT*LLLPSNPRLTQGKK
Trigger: CTTTTTGCCCTGTGTTAGCCTTGGATTAGAGGGTAACAACAATCATGTAAGGCTGTGGTTCTCAAGTGTGGTGTTAGAAGTGCTCATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS CCA 90 bp GAGGTAGAAATCATAGAGCTTGATGGGACATCTCAATGGATTCTCTaGATTTTCCGTCTGTTCTGCATACATGTCATCTGTAACTTTCTG +
Preference number: 5 (lower is better)
Translates to: EVEIIELDGTSQWIL*IFRLFCIHVICNFL
Trigger: CAGAAAGTTACAGATGACATGTATGCAGAACAGACGGAAAATCCAGAGAATCCATTGAGATGTCCCATCAAGCTCTATGATTTCTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000477021.1
ENST00000489642.5
CDS CCA 90 bp GCATTTGAAGAGGTAGAAATCATAGAGCTTGATGGGACATCTCAATaGATTCTCTGGATTTTCCGTCTGTTCTGCATACATGTCATCTGT +
Preference number: 5 (lower is better)
Translates to: AFEEVEIIELDGTSQ*ILWIFRLFCIHVIC
Trigger: ACAGATGACATGTATGCAGAACAGACGGAAAATCCAGAGAATCCATTGAGATGTCCCATCAAGCTCTATGATTTCTACCTCTTCAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS GCA 72 bp CCGCCGGCCCCGCCGCACCGCCAGGGACCCTGGTTCTaGCGTCGTCGCTCCAAGACCGACAGGGTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: PPAPPHRQGPWF*RRRSKTDRVFS
Trigger: GGAGAAAACCCTGTCGGTCTTGGAGCGACGACGGCAGAACCAGGGTCCCTGGCGGTGCGGCGGGGCCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000430979.1
ENST00000437939.5
CDS GCA 72 bp GAGCCGCGGCCGGCCCTCTGCTCAGCAGAAGCCTCCTaGGCGCTCTCGAGGCAGCACCGCCACCCGATATCA +
Preference number: 6 (lower is better)
Translates to: EPRPALCSAEAS*ALSRQHRHPIS
Trigger: TGATATCGGGTGGCGGTGCTGCCTCGAGAGCGCGCAGGAGGCTTCTGCTGAGCAGAGGGCCGGCCGCGGCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS GCA 72 bp CAACCTTCCCAGCGCAACGAGCCGCGGCCGGCCCTCTaGTCAGCAGAAGCCTCCTGCGCGCTCTCGAGGCAG +
Preference number: 6 (lower is better)
Translates to: QPSQRNEPRPAL*SAEASCALSRQ
Trigger: CTGCCTCGAGAGCGCGCAGGAGGCTTCTGCTGAGCAGAGGGCCGGCCGCGGCTCGTTGCGCTGGGAAGGTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS GCA 72 bp GGGTCGTCACGGGCGCGCGCTCCAGAAAGCCGCGGTTaGCCACGGGCCACAGCTCCTAGAGCAGAGATATCC +
Preference number: 6 (lower is better)
Translates to: GSSRARAPESRG*PRATAPRAEIS
Trigger: GGATATCTCTGCTCTAGGAGCTGTGGCCCGTGGGCAACCGCGGCTTTCTGGAGCGCGCGCCCGTGACGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS TCA 72 bp AGCTGCGAGGGACTGGGACTCTGCAGAGACGGGGTCTaGATGGAGGGGGCTGCTGACTGTGGTGCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: SCEGLGLCRDGV*MEGAADCGAWP
Trigger: AGGCCAGGCACCACAGTCAGCAGCCCCCTCCATTCAGACCCCGTCTCTGCAGAGTCCCAGTCCCTCGCAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 72 bp GCGAGGGACTGGGACTCTGCAGAGACGGGGTCTGAATaGAGGGGGCTGCTGACTGTGGTGCCTGGCCTTGGA +
Preference number: 6 (lower is better)
Translates to: ARDWDSAETGSE*RGLLTVVPGLG
Trigger: TCCAAGGCCAGGCACCACAGTCAGCAGCCCCCTCCATTCAGACCCCGTCTCTGCAGAGTCCCAGTCCCTCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 72 bp TGTCCACTTTGCGCTTCTTCACTGGTTGGAGGACACTaGCCGTGCCAACCCGCCGCTCCCCTTCCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: CPLCASSLVGGH*PCQPAAPLPGV
Trigger: CACCCCGGGAAGGGGAGCGGCGGGTTGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGCAAAGTGGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 72 bp AACTCTGCTGCTGGCCCTGTGGAATGGCCAGCACGGTaGCCACCGGCTGCCCTGAGATGGCGTAGGACACAG +
Preference number: 6 (lower is better)
Translates to: NSAAGPVEWPAR*PPAALRWRRTQ
Trigger: CTGTGTCCTACGCCATCTCAGGGCAGCCGGTGGCCACCGTGCTGGCCATTCCACAGGGCCAGCAGCAGAGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 72 bp GAGGAGCGGAACCGCAAGCCAGACAGCAAAGCTGGTTaGTTTCTCTCCAGGCCGAGGCCACGGATGCCCGGG +
Preference number: 6 (lower is better)
Translates to: EERNRKPDSKAG*FLSRPRPRMPG
Trigger: CCCGGGCATCCGTGGCCTCGGCCTGGAGAGAAACCAACCAGCTTTGCTGTCTGGCTTGCGGTTCCGCTCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS CAA 90 bp CCCCCTCACAGAGGAGCGGAACCGCAAGCCAGACAGCAAAGCTGGTaGGTTTCTCTCCAGGCCGAGGCCACGGATGCCCGGGAACGTCAC +
Preference number: 6 (lower is better)
Translates to: PPHRGAEPQARQQSW*VSLQAEATDARERH
Trigger: GTGACGTTCCCGGGCATCCGTGGCCTCGGCCTGGAGAGAAACCAACCAGCTTTGCTGTCTGGCTTGCGGTTCCGCTCCTCTGTGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS TCA 72 bp CTGTGGAATGGCCAGCACGGTGGCCACCGGCTGCCCTaGGATGGCGTAGGACACAGTGATGGGCATGTCCAC +
Preference number: 6 (lower is better)
Translates to: LWNGQHGGHRLP*DGVGHSDGHVH
Trigger: GTGGACATGCCCATCACTGTGTCCTACGCCATCTCAGGGCAGCCGGTGGCCACCGTGCTGGCCATTCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 72 bp GCACCTGGATCTGAGCTGCTTGCAGCTGCGAGGGACTaGGACTCTGCAGAGACGGGGTCTGAATGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: APGSELLAAARD*DSAETGSEWRG
Trigger: CCCCCTCCATTCAGACCCCGTCTCTGCAGAGTCCCAGTCCCTCGCAGCTGCAAGCAGCTCAGATCCAGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CAA 90 bp GTAGGACACAGTGATGGGCATGTCCACTTTGCGCTTCTTCACTGGTaGGAGGACACTGGCCGTGCCAACCCGCCGCTCCCCTTCCCGGGG +
Preference number: 6 (lower is better)
Translates to: VGHSDGHVHFALLHW*EDTGRANPPLPFPG
Trigger: CCCCGGGAAGGGGAGCGGCGGGTTGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCATCACTGTGTCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CAA 90 bp AGGCTGGTGAACGGTGAGTTGTGGGGAGAGCTGAGCCGAGACCTGTaGCGGAGACTGCTGTACCTGCACCTGGACCTGAACCTGCTGCGG +
Preference number: 6 (lower is better)
Translates to: RLVNGELWGELSRDL*RRLLYLHLDLNLLR
Trigger: CCGCAGCAGGTTCAGGTCCAGGTGCAGGTACAGCAGTCTCCGCAACAGGTCTCGGCTCAGCTCTCCCCACAACTCACCGTTCACCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS GCA 72 bp CTGGGCTGCTTGCACGTGCTGCACCTGGATCTGAGCTaGTTGCAGCTGCGAGGGACTGGGACTCTGCAGAGA +
Preference number: 6 (lower is better)
Translates to: LGCLHVLHLDLS*LQLRGTGTLQR
Trigger: TCTCTGCAGAGTCCCAGTCCCTCGCAGCTGCAAGCAGCTCAGATCCAGGTGCAGCACGTGCAAGCAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS GCA 72 bp CTCATCCTCTGCCCACTGGTGCTTCAGAGGAGCCACTaGCCACATTCCCAAGATCTGGGCAGGCCCGTACCC +
Preference number: 6 (lower is better)
Translates to: LILCPLVLQRSH*PHSQDLGRPVP
Trigger: GGGTACGGGCCTGCCCAGATCTTGGGAATGTGGGCAGTGGCTCCTCTGAAGCACCAGTGGGCAGAGGATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489642.5
ENST00000498392.1
CDS CCA 72 bp GTGATGGGCATGTCCACTTTGCGCTTCTTCACTGGTTaGAGGACACTGGCCGTGCCAACCCGCCGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: VMGMSTLRFFTG*RTLAVPTRRSP
Trigger: AGGGGAGCGGCGGGTTGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 72 bp CACAGAGGAGCGGAACCGCAAGCCAGACAGCAAAGCTaGTTGGTTTCTCTCCAGGCCGAGGCCACGGATGCC +
Preference number: 6 (lower is better)
Translates to: HRGAEPQARQQS*LVSLQAEATDA
Trigger: GGCATCCGTGGCCTCGGCCTGGAGAGAAACCAACCAGCTTTGCTGTCTGGCTTGCGGTTCCGCTCCTCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS CAA 72 bp AGTGATGGGCATGTCCACTTTGCGCTTCTTCACTGGTaGGAGGACACTGGCCGTGCCAACCCGCCGCTCCCC +
Preference number: 6 (lower is better)
Translates to: SDGHVHFALLHW*EDTGRANPPLP
Trigger: GGGGAGCGGCGGGTTGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCATCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 72 bp ATGCAAGGCAGAGGGAGGGGTGCCGGGAGGATACCATaGCTCATCCTCTGCCCACTGGTGCTTCAGAGGAGC +
Preference number: 6 (lower is better)
Translates to: MQGRGRGAGRIP*LILCPLVLQRS
Trigger: GCTCCTCTGAAGCACCAGTGGGCAGAGGATGAGTCATGGTATCCTCCCGGCACCCCTCCCTCTGCCTTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489642.5
ENST00000498392.1
CDS CCA 72 bp CACAGTGATGGGCATGTCCACTTTGCGCTTCTTCACTaGTTGGAGGACACTGGCCGTGCCAACCCGCCGCTC +
Preference number: 6 (lower is better)
Translates to: HSDGHVHFALLH*LEDTGRANPPL
Trigger: GAGCGGCGGGTTGGCACGGCCAGTGTCCTCCAACCAGTGAAGAAGCGCAAAGTGGACATGCCCATCACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 72 bp AGTGAACGCTTCAGCAGGGGAAGGTGGCCGCGCTTCTaGCCGCTAGAGCGGATAGTGGATCCTAGGGTATGG +
Preference number: 6 (lower is better)
Translates to: SERFSRGRWPRF*PLERIVDPRVW
Trigger: CCATACCCTAGGATCCACTATCCGCTCTAGCGGCCAGAAGCGCGGCCACCTTCCCCTGCTGAAGCGTTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450685.5
CDS CAA 90 bp CACCTGGACCTGGATGGGTTGCTCAGTAGGCTGGTGAACGGTGAGTaGTGGGGAGAGCTGAGCCGAGACCTGTTGCGGAGACTGCTGTAC +
Preference number: 6 (lower is better)
Translates to: HLDLDGLLSRLVNGE*WGELSRDLLRRLLY
Trigger: GTACAGCAGTCTCCGCAACAGGTCTCGGCTCAGCTCTCCCCACAACTCACCGTTCACCAGCCTACTGAGCAACCCATCCAGGTCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS GCA 72 bp AAGCTGGTTGGTTTCTCTCCAGGCCGAGGCCACGGATaGCCGGGAACGTCACCAGACCAGAAAGGACCCAAT +
Preference number: 6 (lower is better)
Translates to: KLVGFSPGRGHG*PGTSPDQKGPN
Trigger: ATTGGGTCCTTTCTGGTCTGGTGACGTTCCCGGGCATCCGTGGCCTCGGCCTGGAGAGAAACCAACCAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS CAA 72 bp CTGGATGGGTTGCTCAGTAGGCTGGTGAACGGTGAGTaGTGGGGAGAGCTGAGCCGAGACCTGTTGCGGAGA +
Preference number: 6 (lower is better)
Translates to: LDGLLSRLVNGE*WGELSRDLLRR
Trigger: TCTCCGCAACAGGTCTCGGCTCAGCTCTCCCCACAACTCACCGTTCACCAGCCTACTGAGCAACCCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS CAA 72 bp TGCCTGGCCTTGGATCTGCACCTGGACCTGGATGGGTaGCTCAGTAGGCTGGTGAACGGTGAGTTGTGGGGA +
Preference number: 6 (lower is better)
Translates to: CLALDLHLDLDG*LSRLVNGELWG
Trigger: TCCCCACAACTCACCGTTCACCAGCCTACTGAGCAACCCATCCAGGTCCAGGTGCAGATCCAAGGCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CAA 90 bp CTGACCACCAGCAAGAGACTGGCCAGCCACCAGCTGAGCCTGGATTaGCTGATGTGGGATGTGCTCCTCCGGGATTTCTGCAGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: LTTSKRLASHQLSLD*LMWDVLLRDFCSLD
Trigger: ATCCAGGCTGCAGAAATCCCGGAGGAGCACATCCCACATCAGCAAATCCAGGCTCAGCTGGTGGCTGGCCAGTCTCTTGCTGGTGGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CAA 90 bp CTGGACCTGAACCTGCTGCGGCTGCTGAACCTGGATCTGCTGTTCTaGCTGGGTTTGTGGCTGAACACTGGTGGTGACTGGACAGGCAAG +
Preference number: 6 (lower is better)
Translates to: LDLNLLRLLNLDLLF*LGLWLNTGGDWTGK
Trigger: CTTGCCTGTCCAGTCACCACCAGTGTTCAGCCACAAACCCAGCAAGAACAGCAGATCCAGGTTCAGCAGCCGCAGCAGGTTCAGGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CAA 90 bp TTGCTGCTGCTGCTGCTGTGGTGGTGGTGTCTGTTCCTGGGGAGTTaGCTGCTGCGGCTGCTGTTGGGGGTCCCATATATGGACAGTTTG +
Preference number: 6 (lower is better)
Translates to: LLLLLLWWWCLFLGS*LLRLLLGVPYMDSL
Trigger: CAAACTGTCCATATATGGGACCCCCAACAGCAGCCGCAGCAGCAAACTCCCCAGGAACAGACACCACCACCACAGCAGCAGCAGCAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS TCA 72 bp TGGCCACCGGCTGCCCTGAGATGGCGTAGGACACAGTaGTGGGCATGTCCACTTTGCGCTTCTTCACTGGTT +
Preference number: 6 (lower is better)
Translates to: WPPAALRWRRTQ*WACPLCASSLV
Trigger: AACCAGTGAAGAAGCGCAAAGTGGACATGCCCATCACTGTGTCCTACGCCATCTCAGGGCAGCCGGTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 72 bp TGCGGCTGCTGTTGGGGGTCCCATATATGGACAGTTTaGGCCGTATTCTGGTACGTGCCTGCCACAGCCTGC +
Preference number: 6 (lower is better)
Translates to: CGCCWGSHIWTV*AVFWYVPATAC
Trigger: GCAGGCTGTGGCAGGCACGTACCAGAATACGGCTCAAACTGTCCATATATGGGACCCCCAACAGCAGCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS CAA 72 bp CTGCGGCTGCTGTTGGGGGTCCCATATATGGACAGTTaGAGCCGTATTCTGGTACGTGCCTGCCACAGCCTG +
Preference number: 6 (lower is better)
Translates to: LRLLLGVPYMDS*SRILVRACHSL
Trigger: CAGGCTGTGGCAGGCACGTACCAGAATACGGCTCAAACTGTCCATATATGGGACCCCCAACAGCAGCCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS GCA 72 bp TGTGGTGGTGGTGTCTGTTCCTGGGGAGTTTGCTGCTaGGGCTGCTGTTGGGGGTCCCATATATGGACAGTT +
Preference number: 6 (lower is better)
Translates to: CGGGVCSWGVCC*GCCWGSHIWTV
Trigger: AACTGTCCATATATGGGACCCCCAACAGCAGCCGCAGCAGCAAACTCCCCAGGAACAGACACCACCACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS GCA 72 bp GCTGGTTTCTCTTGTGCCATGGCCAAGGCATCTCAGTaGATAGTGCTTGCATTGGCCACTGCGATGGCCTCC +
Preference number: 6 (lower is better)
Translates to: AGFSCAMAKASQ*IVLALATAMAS
Trigger: GGAGGCCATCGCAGTGGCCAATGCAAGCACTATGCACTGAGATGCCTTGGCCATGGCACAAGAGAAACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS GCA 72 bp AAGATCTGGGCAGGCCCGTACCCAAGCAGTGTCCAGTaGAGGAACCACATCAAGATGGATGGTAGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: KIWAGPYPSSVQ*RNHIKMDGRGL
Trigger: CAGACCCCTACCATCCATCTTGATGTGGTTCCTGCACTGGACACTGCTTGGGTACGGGCCTGCCCAGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489642.5
ENST00000498392.1
CDS TCA 72 bp GAACTCCTGAAGGGCTTCTGGCCCCTTAGAGGCCAGTaGGTCCAGAAATTCCTTCATCCTGTGTTGCGGGAC +
Preference number: 6 (lower is better)
Translates to: ELLKGFWPLRGQ*VQKFLHPVLRD
Trigger: GTCCCGCAACACAGGATGAAGGAATTTCTGGACTCACTGGCCTCTAAGGGGCCAGAAGCCCTTCAGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000430979.1
ENST00000437939.5
ENST00000450685.5
CDS CAA 90 bp CCCAGCCACTTCAGTGCTGTCTGTGTATATGCAGTTCCCACCCTGTaGGTACACCATGGTAGTGGTGGCTGTCTGCTGGAACTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: PSHFSAVCVYAVPTL*VHHGSGGCLLELLK
Trigger: CTTCAGGAGTTCCAGCAGACAGCCACCACTACCATGGTGTACCAACAGGGTGGGAACTGCATATACACAGACAGCACTGAAGTGGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000437939.5
ENST00000450685.5
CDS CAA 90 bp AACCTGCTGCGGCTGCTGAACCTGGATCTGCTGTTCTTGCTGGGTTaGTGGCTGAACACTGGTGGTGACTGGACAGGCAAGTTCAAGCAA +
Preference number: 6 (lower is better)
Translates to: NLLRLLNLDLLFLLG*WLNTGGDWTGKFKQ
Trigger: TTGCTTGAACTTGCCTGTCCAGTCACCACCAGTGTTCAGCCACAAACCCAGCAAGAACAGCAGATCCAGGTTCAGCAGCCGCAGCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000437939.5
ENST00000450685.5
CDS TCA 72 bp ATTGCAGAGTCCTTAGGGTTCCGGCCAAAATTAAAGTaGACGCTTCAGCAGGGGAAGGTGGCCGCGCTTCTG +
Preference number: 6 (lower is better)
Translates to: IAESLGFRPKLK*TLQQGKVAALL
Trigger: CAGAAGCGCGGCCACCTTCCCCTGCTGAAGCGTTCACTTTAATTTTGGCCGGAACCCTAAGGACTCTGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450685.5
CDS GCA 72 bp GGTCCAGGACCCAAAGAACTGGCATGCACGCCCGTTTaGCCTTACCAAGTCTTCTCTCATCTCAACTGTCTC +
Preference number: 6 (lower is better)
Translates to: GPGPKELACTPV*PYQVFSHLNCL
Trigger: GAGACAGTTGAGATGAGAGAAGACTTGGTAAGGGCAAACGGGCGTGCATGCCAGTTCTTTGGGTCCTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS CCA 72 bp CTGCTGAACCTGGATCTGCTGTTCTTGCTGGGTTTGTaGCTGAACACTGGTGGTGACTGGACAGGCAAGTTC +
Preference number: 6 (lower is better)
Translates to: LLNLDLLFLLGL*LNTGGDWTGKF
Trigger: GAACTTGCCTGTCCAGTCACCACCAGTGTTCAGCCACAAACCCAGCAAGAACAGCAGATCCAGGTTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000437939.5
ENST00000450685.5
CDS CCA 72 bp GGAAATACAGGGTCGGGGGAGGGAAGGTATGAGGCATaGGCAGTGACTACTAAGGGAAGAGGCAGCTATTCT +
Preference number: 6 (lower is better)
Translates to: GNTGSGEGRYEA*AVTTKGRGSYS
Trigger: AGAATAGCTGCCTCTTCCCTTAGTAGTCACTGCCCATGCCTCATACCTTCCCTCCCCCGACCCTGTATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS GCA 72 bp GAGGCCAGTGAGTCCAGAAATTCCTTCATCCTGTGTTaGGGGACAGACCGTGCCTTTACTCGGATGTACTCT +
Preference number: 6 (lower is better)
Translates to: EASESRNSFILC*GTDRAFTRMYS
Trigger: AGAGTACATCCGAGTAAAGGCACGGTCTGTCCCGCAACACAGGATGAAGGAATTTCTGGACTCACTGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000430979.1
ENST00000437939.5
ENST00000450685.5
CDS GCA 72 bp TTGTGCCATGGCCAAGGCATCTCAGTGCATAGTGCTTaGATTGGCCACTGCGATGGCCTCCTGAATTTCTCT +
Preference number: 6 (lower is better)
Translates to: LCHGQGISVHSA*IGHCDGLLNFS
Trigger: AGAGAAATTCAGGAGGCCATCGCAGTGGCCAATGCAAGCACTATGCACTGAGATGCCTTGGCCATGGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS CCA 72 bp TCAGTGCTGTCTGTGTATATGCAGTTCCCACCCTGTTaGTACACCATGGTAGTGGTGGCTGTCTGCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SVLSVYMQFPPC*YTMVVVAVCWN
Trigger: GTTCCAGCAGACAGCCACCACTACCATGGTGTACCAACAGGGTGGGAACTGCATATACACAGACAGCACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000437939.5
ENST00000450685.5
CDS CCA 72 bp TTCTTGCTGGGTTTGTGGCTGAACACTGGTGGTGACTaGACAGGCAAGTTCAAGCAAAGACCCAGCCACTTC +
Preference number: 6 (lower is better)
Translates to: FLLGLWLNTGGD*TGKFKQRPSHF
Trigger: GAAGTGGCTGGGTCTTTGCTTGAACTTGCCTGTCCAGTCACCACCAGTGTTCAGCCACAAACCCAGCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000437939.5
ENST00000450685.5
CDS CCA 72 bp GTAGGGCTAGTAATGGTCCCAGTGGCACTGTACAGGTaGGCACTGTCTACTGTCAGTAAGTCTGGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: VGLVMVPVALYR*ALSTVSKSGLK
Trigger: TTTGAGGCCAGACTTACTGACAGTAGACAGTGCCCACCTGTACAGTGCCACTGGGACCATTACTAGCCCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 72 bp GCTTGCACTCCCATAGCATCTCCTCAGTCACGTGGCTaGGCAAGACATAGCCTAGGAGGAATAGAGTACTGT +
Preference number: 6 (lower is better)
Translates to: ACTPIASPQSRG*ARHSLGGIEYC
Trigger: ACAGTACTCTATTCCTCCTAGGCTATGTCTTGCCCAGCCACGTGACTGAGGAGATGCTATGGGAGTGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS CAA 72 bp GGATTAGAGGGGTTCTTCTTTGTCTGTCGCAAGACCTaGGAGAAGGCCAGCTTCATGTGCTGGTCCACTGTC +
Preference number: 6 (lower is better)
Translates to: GLEGFFFVCRKT*EKASFMCWSTV
Trigger: GACAGTGGACCAGCACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGACAAAGAAGAACCCCTCTAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000469910.1
ENST00000477021.1
ENST00000489642.5
ENST00000498392.1
CDS CAA 72 bp TGGTCCAGGACCCAAAGAACTGGCATGCACGCCCGTTaGCCCTTACCAAGTCTTCTCTCATCTCAACTGTCT +
Preference number: 6 (lower is better)
Translates to: WSRTQRTGMHAR*PLPSLLSSQLS
Trigger: AGACAGTTGAGATGAGAGAAGACTTGGTAAGGGCAAACGGGCGTGCATGCCAGTTCTTTGGGTCCTGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS TCA 72 bp TGCATAGTGCTTGCATTGGCCACTGCGATGGCCTCCTaGATTTCTCTTATCACCAGGATCCGCGTCAGCATT +
Preference number: 6 (lower is better)
Translates to: CIVLALATAMAS*ISLITRIRVSI
Trigger: AATGCTGACGCGGATCCTGGTGATAAGAGAAATTCAGGAGGCCATCGCAGTGGCCAATGCAAGCACTATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS GCA 72 bp GACAGGCAAGTTCAAGCAAAGACCCAGCCACTTCAGTaGTGTCTGTGTATATGCAGTTCCCACCCTGTTGGT +
Preference number: 6 (lower is better)
Translates to: DRQVQAKTQPLQ*CLCICSSHPVG
Trigger: ACCAACAGGGTGGGAACTGCATATACACAGACAGCACTGAAGTGGCTGGGTCTTTGCTTGAACTTGCCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000437939.5
ENST00000450685.5
CDS GCA 72 bp CTTATCACCAGGATCCGCGTCAGCATTTGTCCCATCTaGTCTCTGCTGATAGGCTGGACTGAGTACCAGATT +
Preference number: 6 (lower is better)
Translates to: LITRIRVSICPI*SLLIGWTEYQI
Trigger: AATCTGGTACTCAGTCCAGCCTATCAGCAGAGAGCAGATGGGACAAATGCTGACGCGGATCCTGGTGATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS CCA 72 bp TGTCGCAAGACCTTGGAGAAGGCCAGCTTCATGTGCTaGTCCACTGTCTTCAATAGGAAGTACCCAAGCAGT +
Preference number: 6 (lower is better)
Translates to: CRKTLEKASFMC*STVFNRKYPSS
Trigger: ACTGCTTGGGTACTTCCTATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477021.1
CDS CCA 72 bp TGTCGCAAGACCTTGGAGAAGGCCAGCTTCATGTGCTaGTCCACTGTCTTCAATAGGAAGTACCTGGATCAC +
Preference number: 6 (lower is better)
Translates to: CRKTLEKASFMC*STVFNRKYLDH
Trigger: GTGATCCAGGTACTTCCTATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489642.5
ENST00000498392.1
CDS CAA 72 bp TTCAGTGCTGTCTGTGTATATGCAGTTCCCACCCTGTaGGTACACCATGGTAGTGGTGGCTGTCTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: FSAVCVYAVPTL*VHHGSGGCLLE
Trigger: TTCCAGCAGACAGCCACCACTACCATGGTGTACCAACAGGGTGGGAACTGCATATACACAGACAGCACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000437939.5
ENST00000450685.5
CDS TCA 72 bp CCTGCACAGCCACTGGAATGTGGATGTTGCCATTCATaGACTGTGCTGGAAAGAGAGAGTTTGCAAGGGTCT +
Preference number: 6 (lower is better)
Translates to: PAQPLECGCCHS*TVLERESLQGS
Trigger: AGACCCTTGCAAACTCTCTCTTTCCAGCACAGTTCATGAATGGCAACATCCACATTCCAGTGGCTGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 72 bp CTGTGGTTCAACTTCAGCAACCTGGACAGTTTGAGCTaGACAAGTAACTTGGAGTTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LWFNFSNLDSLS*TSNLELLLLLL
Trigger: CAGCAGCAGCAGCAGCAACTCCAAGTTACTTGTTCAGCTCAAACTGTCCAGGTTGCTGAAGTTGAACCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS TCA 72 bp ATTGCAGAGTCCTTAGGGTTCCTCTTCCTTGGGCTTTaGGGCCCCTCAAGGTTCACATCTACTCCAACAATG +
Preference number: 6 (lower is better)
Translates to: IAESLGFLFLGL*GPSRFTSTPTM
Trigger: CATTGTTGGAGTAGATGTGAACCTTGAGGGGCCTCAAAGCCCAAGGAAGAGGAACCCTAAGGACTCTGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430979.1
CDS GCA 72 bp CAAGGCATCTCAGTGCATAGTGCTTGCATTGGCCACTaGGATGGCCTCCTGAATTTCTCTTATCACCAGGAT +
Preference number: 6 (lower is better)
Translates to: QGISVHSACIGH*DGLLNFSYHQD
Trigger: ATCCTGGTGATAAGAGAAATTCAGGAGGCCATCGCAGTGGCCAATGCAAGCACTATGCACTGAGATGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS GCA 72 bp CAAAGGAGATGGTGTTCTCTAGGGAATTATTCATATTaGAGAGTCCTTAGGGTTCCCGGCGACGTCACTGCC +
Preference number: 6 (lower is better)
Translates to: QRRWCSLGNYSY*RVLRVPGDVTA
Trigger: GGCAGTGACGTCGCCGGGAACCCTAAGGACTCTGCAATATGAATAATTCCCTAGAGAACACCATCTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395443.7
CDS GCA 72 bp CAAAGGAGATGGTGTTCTCTAGGGAATTATTCATATTaGAGAGTCCTTAGGGTTCCTTCCGTCGCCCGCCAG +
Preference number: 6 (lower is better)
Translates to: QRRWCSLGNYSY*RVLRVPSVARQ
Trigger: CTGGCGGGCGACGGAAGGAACCCTAAGGACTCTGCAATATGAATAATTCCCTAGAGAACACCATCTCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411682.1
CDS CCA 72 bp TCTGAGAGTGTACAGAGCTTTGCATATTTTCAAAGGTaGTCCAGGACCCAAAGAACTGGCATGCACGCCCGT +
Preference number: 6 (lower is better)
Translates to: SESVQSFAYFQR*SRTQRTGMHAR
Trigger: ACGGGCGTGCATGCCAGTTCTTTGGGTCCTGGACCACCTTTGAAAATATGCAAAGCTCTGTACACTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS CAA 72 bp GTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCTaGTGCCATGGCCAAGGCATCTCAGTGCATAGTGCT +
Preference number: 6 (lower is better)
Translates to: VKVCLVFPGWFL*CHGQGISVHSA
Trigger: AGCACTATGCACTGAGATGCCTTGGCCATGGCACAAGAGAAACCAGCCAGGAAAAACCAGACAGACTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS CAA 90 bp TTATCCTTGGGATTAGAGGGGTTCTTCTTTGTCTGTCGCAAGACCTaGGAGAAGGCCAGCTTCATGTGCTGGTCCACTGTCTTCAATAGG +
Preference number: 6 (lower is better)
Translates to: LSLGLEGFFFVCRKT*EKASFMCWSTVFNR
Trigger: CCTATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACAGACAAAGAAGAACCCCTCTAATCCCAAGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000469910.1
ENST00000477021.1
ENST00000489642.5
ENST00000498392.1
CDS TCA 72 bp TGTGACTGTGGTTCAACTTCAGCAACCTGGACAGTTTaGGCTGAACAAGTAACTTGGAGTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CDCGSTSATWTV*AEQVTWSCCCC
Trigger: GCAGCAGCAGCAACTCCAAGTTACTTGTTCAGCTCAAACTGTCCAGGTTGCTGAAGTTGAACCACAGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
CDS GCA 72 bp CAGAAATTCCTTCATCCTGTGTTGCGGGACAGACCGTaGCTTTACTCGGATGTACTCTTCAAAGGAGATGGT +
Preference number: 6 (lower is better)
Translates to: QKFLHPVLRDRP*LYSDVLFKGDG
Trigger: ACCATCTCCTTTGAAGAGTACATCCGAGTAAAGGCACGGTCTGTCCCGCAACACAGGATGAAGGAATTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000430979.1
ENST00000437939.5
ENST00000450685.5
CDS GCA 72 bp CAAAGGAGATGGTGTTCTCTAGGGAATTATTCATATTaGAGAGTCCTTAGGGTTCCCGCACTGGAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: QRRWCSLGNYSY*RVLRVPALEPS
Trigger: TGAGGGCTCCAGTGCGGGAACCCTAAGGACTCTGCAATATGAATAATTCCCTAGAGAACACCATCTCCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437939.5
CDS CCA 72 bp AAGAGAGAGTTTGCAAGGGTCTGCACTACCTCTTCATaGGAGTTTTTCACTACAGATGTGGTGCCCACCATC +
Preference number: 6 (lower is better)
Translates to: KREFARVCTTSS*EFFTTDVVPTI
Trigger: GATGGTGGGCACCACATCTGTAGTGAAAAACTCCCATGAAGAGGTAGTGCAGACCCTTGCAAACTCTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 72 bp CACTGGAATGTGGATGTTGCCATTCATGAACTGTGCTaGAAAGAGAGAGTTTGCAAGGGTCTGCACTACCTC +
Preference number: 6 (lower is better)
Translates to: HWNVDVAIHELC*KERVCKGLHYL
Trigger: GAGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCAGCACAGTTCATGAATGGCAACATCCACATTCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS CCA 72 bp TCATGTGCTGGTCCACTGTCTTCAATAGGAAGTACCTaGATCACAAGTAAAATGCAAGGCAGAGGGAGGGGT +
Preference number: 6 (lower is better)
Translates to: SCAGPLSSIGST*ITSKMQGRGRG
Trigger: ACCCCTCCCTCTGCCTTGCATTTTACTTGTGATCCAGGTACTTCCTATTGAAGACAGTGGACCAGCACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489642.5
ENST00000498392.1
CDS CCA 72 bp GCAGTGACTACTAAGGGAAGAGGCAGCTATTCTGTCTaGGGCTTCTCTGCTTCTAGGAGGAAAGTTTGGAAT +
Preference number: 6 (lower is better)
Translates to: AVTTKGRGSYSV*GFSASRRKVWN
Trigger: ATTCCAAACTTTCCTCCTAGAAGCAGAGAAGCCCCAGACAGAATAGCTGCCTCTTCCCTTAGTAGTCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS CAA 72 bp AGGGCCTTCAAGTACCGGATACTCGTGCTTTTATCCTaGGGATTAGAGGGGTTCTTCTTTGTCTGTCGCAAG +
Preference number: 6 (lower is better)
Translates to: RAFKYRILVLLS*GLEGFFFVCRK
Trigger: CTTGCGACAGACAAAGAAGAACCCCTCTAATCCCAAGGATAAAAGCACGAGTATCCGGTACTTGAAGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000469910.1
ENST00000477021.1
ENST00000489642.5
ENST00000498392.1
CDS CAA 72 bp TATTGCAGAGTCCTTAGGGTTCCTCTTCCTTGGGCTTaGAGGCCCCTCAAGGTTCACATCTACTCCAACAAT +
Preference number: 6 (lower is better)
Translates to: YCRVLRVPLPWA*RPLKVHIYSNN
Trigger: ATTGTTGGAGTAGATGTGAACCTTGAGGGGCCTCAAAGCCCAAGGAAGAGGAACCCTAAGGACTCTGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430979.1
CDS CAA 90 bp TGTATTCCAAGGGCCTTCAAGTACCGGATACTCGTGCTTTTATCCTaGGGATTAGAGGGGTTCTTCTTTGTCTGTCGCAAGACCTTGGAG +
Preference number: 6 (lower is better)
Translates to: CIPRAFKYRILVLLS*GLEGFFFVCRKTLE
Trigger: CTCCAAGGTCTTGCGACAGACAAAGAAGAACCCCTCTAATCCCAAGGATAAAAGCACGAGTATCCGGTACTTGAAGGCCCTTGGAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000469910.1
ENST00000477021.1
ENST00000489642.5
ENST00000498392.1
CDS CAA 90 bp TTCTTTAGTGTGAAAGTCTGTCTGGTTTTTCCTGGCTGGTTTCTCTaGTGCCATGGCCAAGGCATCTCAGTGCATAGTGCTTGCATTGGC +
Preference number: 6 (lower is better)
Translates to: FFSVKVCLVFPGWFL*CHGQGISVHSACIG
Trigger: GCCAATGCAAGCACTATGCACTGAGATGCCTTGGCCATGGCACAAGAGAAACCAGCCAGGAAAAACCAGACAGACTTTCACACTAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000489642.5
ENST00000498392.1
CDS CCA 72 bp TGTCGCAAGACCTTGGAGAAGGCCAGCTTCATGTGCTaGTCCACTGTCTTCAATAGGAAGTACTTGGTATTA +
Preference number: 6 (lower is better)
Translates to: CRKTLEKASFMC*STVFNRKYLVL
Trigger: TAATACCAAGTACTTCCTATTGAAGACAGTGGACCAGCACATGAAGCTGGCCTTCTCCAAGGTCTTGCGACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000469910.1
CDS GCA 72 bp GTTGCCATTCATGAACTGTGCTGGAAAGAGAGAGTTTaGAAGGGTCTGCACTACCTCTTCATGGGAGTTTTT +
Preference number: 6 (lower is better)
Translates to: VAIHELCWKERV*KGLHYLFMGVF
Trigger: AAAAACTCCCATGAAGAGGTAGTGCAGACCCTTGCAAACTCTCTCTTTCCAGCACAGTTCATGAATGGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
CDS TCA 72 bp CAGTCACCATGTTGCATGTATTTCTGCTGCTTGTCCTaGGTTCTTAAGACTTCTAATATTCCGGCGACGTCA +
Preference number: 6 (lower is better)
Translates to: QSPCCMYFCCLS*VLKTSNIPATS
Trigger: TGACGTCGCCGGAATATTAGAAGTCTTAAGAACTCAGGACAAGCAGCAGAAATACATGCAACATGGTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000430979.1
CDS CCA 72 bp TCTCAAATATATGTCAGAGGAATTCAGAAGGCCTCTTaGATAGCTTCCACACTCTTCACTGGACAGATGCCA +
Preference number: 6 (lower is better)
Translates to: SQIYVRGIQKAS*IASTLFTGQMP
Trigger: TGGCATCTGTCCAGTGAAGAGTGTGGAAGCTATCCAAGAGGCCTTCTGAATTCCTCTGACATATATTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477021.1
ENST00000489642.5
ENST00000498392.1
CDS CAA 90 bp CCAAACTCTGCATATATGCATAATTCTCTGAGAGTGTACAGAGCTTaGCATATTTTCAAAGGTGGTCCAGGACCCAAAGAACTGGCATGC +
Preference number: 6 (lower is better)
Translates to: PNSAYMHNSLRVYRA*HIFKGGPGPKELAC
Trigger: GCATGCCAGTTCTTTGGGTCCTGGACCACCTTTGAAAATATGCAAAGCTCTGTACACTCTCAGAGAATTATGCATATATGCAGAGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS GCA 72 bp CAAAGGAGATGGTGTTCTCTAGGGAATTATTCATATTaGAGAGTCCTTAGGGTTCCAGTCACCATGTTGCAT +
Preference number: 6 (lower is better)
Translates to: QRRWCSLGNYSY*RVLRVPVTMLH
Trigger: ATGCAACATGGTGACTGGAACCCTAAGGACTCTGCAATATGAATAATTCCCTAGAGAACACCATCTCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357496.6
ENST00000424300.5
CDS CCA 72 bp ACCGTGCCTTTACTCGGATGTACTCTTCAAAGGAGATaGTGTTCTCTAGGGAATTATTCATATTGCAGAGTC +
Preference number: 6 (lower is better)
Translates to: TVPLLGCTLQRR*CSLGNYSYCRV
Trigger: GACTCTGCAATATGAATAATTCCCTAGAGAACACCATCTCCTTTGAAGAGTACATCCGAGTAAAGGCACGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000411682.1
ENST00000424300.5
ENST00000430979.1
ENST00000437939.5
ENST00000450685.5
CDS TCA 72 bp GCTGAACATCCTTCAGAACTTCATGTAGCCACTCCGTaGACCGAACATAATAAAGATCGGAGAAAATGTCAT +
Preference number: 6 (lower is better)
Translates to: AEHPSELHVATP*TEHNKDRRKCH
Trigger: ATGACATTTTCTCCGATCTTTATTATGTTCGGTTCACGGAGTGGCTACATGAAGTTCTGAAGGATGTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000479449.1
ENST00000498440.5
CDS TCA 72 bp CAGTCACCATGTTGCATGTATTTCTGCTGCTTGTCCTaGGTTCTTAAGACTTCTAATATTTTGGGCCTCAAG +
Preference number: 6 (lower is better)
Translates to: QSPCCMYFCCLS*VLKTSNILGLK
Trigger: CTTGAGGCCCAAAATATTAGAAGTCTTAAGAACTCAGGACAAGCAGCAGAAATACATGCAACATGGTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424300.5
CDS GCA 72 bp CAAAGGAGATGGTGTTCTCTAGGGAATTATTCATATTaGAGAGTCCTTAGGGTTCCGGCCAAAATTAAAGTG +
Preference number: 6 (lower is better)
Translates to: QRRWCSLGNYSY*RVLRVPAKIKV
Trigger: CACTTTAATTTTGGCCGGAACCCTAAGGACTCTGCAATATGAATAATTCCCTAGAGAACACCATCTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450685.5
CDS CCA 72 bp GAGGTAGAAATCATAGAGCTTGATGGGACATCTCAATaGATTCTCTGGATTTTCCGTCTGTTCTGCATACAT +
Preference number: 6 (lower is better)
Translates to: EVEIIELDGTSQ*ILWIFRLFCIH
Trigger: ATGTATGCAGAACAGACGGAAAATCCAGAGAATCCATTGAGATGTCCCATCAAGCTCTATGATTTCTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357496.6
ENST00000395443.7
ENST00000424300.5
ENST00000477021.1
ENST00000489642.5
ENST00000498392.1
CDS GCA 72 bp ACATCTCAATGGATTCTCTGGATTTTCCGTCTGTTCTaGATACATGTCATCTGTAACTATAAAACACACATC +
Preference number: 6 (lower is better)
Translates to: TSQWILWIFRLF*IHVICNYKTHI
Trigger: GATGTGTGTTTTATAGTTACAGATGACATGTATGCAGAACAGACGGAAAATCCAGAGAATCCATTGAGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498392.1
CDS TCA 72 bp ACTATAAACCAAACTCTGCATATATGCATAATTCTCTaGGAGTGTACAGAGCTTTGCATATTTTCAAAGGTG +
Preference number: 6 (lower is better)
Translates to: TINQTLHICIIL*ECTELCIFSKV
Trigger: CACCTTTGAAAATATGCAAAGCTCTGTACACTCTCAGAGAATTATGCATATATGCAGAGTTTGGTTTATAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498392.1