Pregenerated sensors for PYROXD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000121350Ensembl transcript IDs: ENST00000240651.14, ENST00000538582.5, ENST00000538615.1, ENST00000544187.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATTTCCCTGAGCCACATTaGAAGAAGAATTGTCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: HWKKNCLGPHIKYANTDDFPEPH*KKNCLG Trigger: CCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAA...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| 3UTR-3UTR CCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATGAAGAAGAATTGTCTTaGGCCGCACATAAAATATGC | + |
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Preference number: 2 (lower is better) Translates to: HWKKNCLGPHIKYANTDDEEELS*AAHKIC Trigger: GCATATTTTATGTGCGGCCCAAGACAATTCTTCTTC...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| 3UTR-3UTR CCA 90 bp | TGGATGACTTTGAGGGATTCAAGATTTCAATGGAGAAAGGCAGATATGGTGGAAAGTTGTTGTTTCTCATaGATGAGCAAAGAACGTAGT | + |
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Preference number: 2 (lower is better) Translates to: WMTLRDSRFQWRKADMVESCCFS*MSKERS Trigger: ACTACGTTCTTTGCTCATCCATGAGAAACAACAACT...TTCCACCATATCTGCCTTTCTCCATTGAAATCTTGAATCCCTCAAAGTCATCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544187.1 |
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| 3UTR-3UTR TCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATGGACAAGCTTGTAGATaGTTTCAGGTTATAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: HWKKNCLGPHIKYANTDDGQACR*FQVIKP Trigger: TGGTTTTATAACCTGAAATCATCTACAAGCTTGTCC...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| 3UTR CCA 72 bp | TTACAGATTTGTGTTGGGCTGCATTCAAAGCTGTTCTaGGCTGCATTAGACCCGTGGGCTAGAGTTGGACAA | + |
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Preference number: 3 (lower is better) Translates to: LQICVGLHSKLF*AALDPWARVGQ Trigger: TTGTCCAACTCTAGCCCACGGGTCTAATGCAGCCCAGAACAGCTTTGAATGCAGCCCAACACAAATCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| 3UTR TCA 72 bp | TATGTAGATCAGGGATGTCCAATCTTTTGGCTTCCCTaGGCCACATTGGAAGAAGAATTGTCTTGGGCCGCA | + |
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Preference number: 3 (lower is better) Translates to: YVDQGCPIFWLP*ATLEEELSWAA Trigger: TGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCCTGATCTACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| 3UTR TCA 72 bp | TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTaGGCCACATTGGAAGAAGAATTGTCTTGGGCCGCA | + |
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Preference number: 3 (lower is better) Translates to: YVDQGCPIFWLP*ATLEEELSWAA Trigger: TGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| 3UTR-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATGGGATGTCCAATCTTTaGGCTTCCCTGAGCCACATT | + |
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Preference number: 3 (lower is better) Translates to: HWKKNCLGPHIKYANTDDGMSNL*ASLSHI Trigger: AATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCC...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| 3UTR-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATGTTTACAGATTTGTGTaGGGCTGCATTCAAAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: HWKKNCLGPHIKYANTDDVYRFV*GCIQSC Trigger: ACAGCTTTGAATGCAGCCCAACACAAATCTGTAAAC...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| 3UTR-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATGTTTACAGATTTGTGTaGGGCTGCATTCAAAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: HWKKNCLGPHIKYANTDDVYRFV*GCIQSC Trigger: ACAGCTTTGAATGCAGCCCAACACAAATCTGTAAAC...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| 3UTR-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATAGAAAGTTTACAGATTaGTGTTGGGCTGCATTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HWKKNCLGPHIKYANTDDRKFTD*CWAAFK Trigger: TTTGAATGCAGCCCAACACAAATCTGTAAACTTTCT...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| 3UTR-3UTR CAA 90 bp | CAAGGTGAATCTTATGAGAAAACTTCATGGATGACTTTGAGGGATTCAAGATTTGAAGATGAGACTACATaGCTGCAATCTCATGATAAA | + |
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Preference number: 3 (lower is better) Translates to: QGESYEKTSWMTLRDSRFEDETT*LQSHDK Trigger: TTTATCATGAGATTGCAGCAATGTAGTCTCATCTTC...AAATCTTGAATCCCTCAAAGTCATCCATGAAGTTTTCTCATAAGATTCACCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544187.1 |
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| CDS-3UTR TCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATATTAACAAAGGGGGCTaGGGGCCGGGTGCTGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDINKGG*GPGAVA Trigger: AGCCACAGCACCCGGCCCTCAGCCCCCTTTGTTAAT...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR GCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATCCAAGATCGCACCACTaGCCTCCAGTCTGGGCGACA | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDPRSHH*PPVWAT Trigger: TGTCGCCCAGACTGGAGGGCAGTGGTGCGATCTTGG...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR GCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATCGGAAGCGGGCAGACTaGTTGAGCCCAGGAGTTCGA | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDRKRAD*LSPGVR Trigger: TCGAACTCCTGGGCTCAAGCAGTCTGCCCGCTTCCG...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR TCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATGCTAGTGAGGTCATCTaGGGACCACCAAGCAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDASEVI*GPPSSF Trigger: GAAACTGCTTGGTGGTCCTCAGATGACCTCACTAGC...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR TCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATGACATTACAAGGATCTaGGCACGGATCAGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDDITRI*ARISQL Trigger: AAGCTGGCTGATCCGTGCTCAGATCCTTGTAATGTC...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR TCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATGCCTGGCCAACATGGTaGAAGCCCGTCTCTACTAAA | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDAWPTW*KPVSTK Trigger: TTTAGTAGAGACGGGCTTTCACCATGTTGGCCAGGC...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR GCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATTCTGGGAGCAATAAGTaGGGAAAAGGGCGCAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDSGSNK*GKGRSK Trigger: TTTGCTGCGCCCTTTTCCGCACTTATTGCTCCCAGA...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR GCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATTTCTCGGCTATAATTTaGCTCCCACTCCTCCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDFSAII*LPLLPA Trigger: CGCAGGGAGGAGTGGGAGGCAAATTATAGCCGAGAA...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR CCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATTTCCCTGAGCCACATTaGAAGAAGAATTGTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDFPEPH*KKNCLG Trigger: CCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAA...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| CDS-3UTR TCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATTCTTCCGATGGAAAGTaGGTAGCCAAATATGGGATT | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDSSDGK*VAKYGI Trigger: AATCCCATATTTGGCTACTCACTTTCCATCGGAAGA...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR CCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATCGGATCAGCCAGCTTTaGTTTCTCGGCTATAATTTG | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDRISQL*FLGYNL Trigger: CAAATTATAGCCGAGAAACCAAAGCTGGCTGATCCG...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR TCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATCTATTACTATGCAAGTaGCAAAGTCCACGCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDLLLCK*QSPRRT Trigger: AGTTCTGCGTGGACTTTGTCACTTGCATAGTAATAG...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000240651.14 |
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| CDS-3UTR GCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATCAAAGTCCTCATGTCTaGTCTGACATTACAAGGATC | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDQSPHV*SDITRI Trigger: GATCCTTGTAATGTCAGAGCAGACATGAGGACTTTG...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR CCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATGAAGAAGAATTGTCTTaGGCCGCACATAAAATATGC | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDEEELS*AAHKIC Trigger: GCATATTTTATGTGCGGCCCAAGACAATTCTTCTTC...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| CDS-3UTR TCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATGGACAAGCTTGTAGATaGTTTCAGGTTATAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDGQACR*FQVIKP Trigger: TGGTTTTATAACCTGAAATCATCTACAAGCTTGTCC...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| CDS-3UTR CCA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATGACTTGGCAACTATCTaGAAACTAAACTCAATCACC | + |
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Preference number: 4 (lower is better) Translates to: HWKKNCLGPHIKYANTDDDLATI*KLNSIT Trigger: GGTGATTGAGTTTAGTTTCCAGATAGTTGCCAAGTC...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| 3UTR CAA 72 bp | CAAGGTGAATCTTATGAGAAAACTTCATGGATGACTTaGAGGGATTCAAGATTTCAATGGAGAAAGGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: QGESYEKTSWMT*RDSRFQWRKAD Trigger: ATCTGCCTTTCTCCATTGAAATCTTGAATCCCTCAAAGTCATCCATGAAGTTTTCTCATAAGATTCACCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544187.1 |
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| CDS-3UTR CCA 90 bp | CAAGGTGAATCTTATGAGAAAACTTCATGGATGACTTTGAGGGATTCAAGATTTAGTTGTTGTTTCTCATaGATGAGCAAAGAACGTAGT | + |
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Preference number: 4 (lower is better) Translates to: QGESYEKTSWMTLRDSRFSCCFS*MSKERS Trigger: ACTACGTTCTTTGCTCATCCATGAGAAACAACAACT...AAATCTTGAATCCCTCAAAGTCATCCATGAAGTTTTCTCATAAGATTCACCTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544187.1 |
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| CDS-3UTR CCA 90 bp | ATGACTTTGAGGGATTCAAGATTTCAATGGAGAAAGGCAGATATGGTGGAAATATATGAGAAAACTTCATaGATGACTTTGAGGGATTCA | + |
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Preference number: 4 (lower is better) Translates to: MTLRDSRFQWRKADMVEIYEKTS*MTLRDS Trigger: TGAATCCCTCAAAGTCATCCATGAAGTTTTCTCATA...TATTTCCACCATATCTGCCTTTCTCCATTGAAATCTTGAATCCCTCAAAGTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544187.1 |
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| CDS-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATAAGCGGGCAGACTGCTaGAGCCCAGGAGTTCGAGAC | + |
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Preference number: 5 (lower is better) Translates to: HWKKNCLGPHIKYANTDDKRADC*SPGVRD Trigger: GTCTCGAACTCCTGGGCTCAAGCAGTCTGCCCGCTT...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATTTTCTCGGCTATAATTaGCCTCCCACTCCTCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: HWKKNCLGPHIKYANTDDFLGYN*PPTPPC Trigger: GCAGGGAGGAGTGGGAGGCAAATTATAGCCGAGAAA...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATGGGATGTCCAATCTTTaGGCTTCCCTGAGCCACATT | + |
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Preference number: 5 (lower is better) Translates to: HWKKNCLGPHIKYANTDDGMSNL*ASLSHI Trigger: AATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCC...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| CDS-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATCAACAGAAGAATCGCTaGAACCCGGGAGGCAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: HWKKNCLGPHIKYANTDDQQKNR*NPGGKA Trigger: AGCTTTGCCTCCCGGGTTCAAGCGATTCTTCTGTTG...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATAGGATGTCCAATCTTTaGGCTTCCCTGAGCCACATT | + |
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Preference number: 5 (lower is better) Translates to: HWKKNCLGPHIKYANTDDRMSNL*ASLSHI Trigger: AATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCT...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| CDS-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGACGATAGAAAGTTTACAGATTaGTGTTGGGCTGCATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: HWKKNCLGPHIKYANTDDRKFTD*CWAAFK Trigger: TTTGAATGCAGCCCAACACAAATCTGTAAACTTTCT...ATCGTCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000240651.14 ENST00000538582.5 |
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| CDS-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATAGGGGGCTGAATTTTTaGTCTAAATACAAAGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: HWKKNCLGPHIKYANTDDRGLNF*SKYKVL Trigger: GAGGACTTTGTATTTAGACAAAAAATTCAGCCCCCT...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR CAA 90 bp | CATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAACACTGATGATAGATGCACTAAAGACTaGGCAACTATCTGGAAACTA | + |
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Preference number: 5 (lower is better) Translates to: HWKKNCLGPHIKYANTDDRCTKD*ATIWKL Trigger: TAGTTTCCAGATAGTTGCCAAGTCTTTAGTGCATCT...ATCATCAGTGTTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS-3UTR CAA 90 bp | ATGGATGACTTTGAGGGATTCAAGATTTCAATGGAGAAAGGCAGATATGGTGGAGAAGATGAGACTACATaGCTGCAATCTCATGATAAA | + |
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Preference number: 5 (lower is better) Translates to: MDDFEGFKISMEKGRYGGEDETT*LQSHDK Trigger: TTTATCATGAGATTGCAGCAATGTAGTCTCATCTTC...TCCACCATATCTGCCTTTCTCCATTGAAATCTTGAATCCCTCAAAGTCATCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544187.1 |
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| CDS-3UTR CAA 90 bp | GAGAAAACTTCATGGATGACTTTGAGGGATTCAAGATTTCAATGGAGAAAGGCAACTTCATGGATGACTTaGAGGGATTCAAGATTTCAA | + |
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Preference number: 5 (lower is better) Translates to: EKTSWMTLRDSRFQWRKATSWMT*RDSRFQ Trigger: TTGAAATCTTGAATCCCTCAAAGTCATCCATGAAGT...TGCCTTTCTCCATTGAAATCTTGAATCCCTCAAAGTCATCCATGAAGTTTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544187.1 |
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| CDS CAA 72 bp | AATCCCAGCTACAGGCTGACGCAACAGAAGAATCGCTaGAACCCGGGAGGCAAAGCTTGCATTAAGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: NPSYRLTQQKNR*NPGGKACIKPR Trigger: TCTTGGCTTAATGCAAGCTTTGCCTCCCGGGTTCAAGCGATTCTTCTGTTGCGTCAGCCTGTAGCTGGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS TCA 72 bp | CAAAGTCCTCATGTCTGCTCTGACATTACAAGGATCTaGGCACGGATCAGCCAGCTTTGGTTTCTCGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: QSPHVCSDITRI*ARISQLWFLGY Trigger: ATAGCCGAGAAACCAAAGCTGGCTGATCCGTGCTCAGATCCTTGTAATGTCAGAGCAGACATGAGGACTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538582.5 |
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| CDS CCA 72 bp | TCTTTCTGTCATCTTTGCCACAGAAGCAGTCACCAATaGATAACTAATCAGACTGATTTTTGGTATTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: SFCHLCHRSSHQ*ITNQTDFWYLL Trigger: TAACAAATACCAAAAATCAGTCTGATTAGTTATCCATTGGTGACTGCTTCTGTGGCAAAGATGACAGAAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000538615.1 |
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