RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PYCR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000104524

Ensembl transcript IDs: ENST00000220966.10, ENST00000377579.7, ENST00000433751.5, ENST00000447926.6, ENST00000462036.5, ENST00000482616.1, ENST00000495276.6, ENST00000616663.2, ENST00000631620.1, ENST00000632107.1, ENST00000632135.1, ENST00000633357.1, ENST00000633497.1, ENST00000634183.1

Found 969 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCCAGGGCCACCCTCCCAGACCTCAAGCCACCCCACCTACCACTaGCCACCTGGTGCCACCCCAGCACTGCCGCAGACCTGGCCCAGC +
Preference number: 1 (lower is better)
Translates to: WPGPPSQTSSHPTYH*PPGATPALPQTWPS
Trigger: GCTGGGCCAGGTCTGCGGCAGTGCTGGGGTGGCACCAGGTGGGCAGTGGTAGGTGGGGTGGCTTGAGGTCTGGGAGGGTGGCCCTGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR GCA 90 bp GCTTCAGGCACCTCCTCACACCGCCCACAGGCCTCCAGCAGATGCTaGAGGAGCTTGGTCTCGCTGCTCCCCACGTGGCGGCCCCGCGCC +
Preference number: 1 (lower is better)
Translates to: ASGTSSHRPQASSRC*RSLVSLLPTWRPRA
Trigger: GGCGCGGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGTGGGCGGTGTGAGGAGGTGCCTGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CCA 90 bp CTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGATGGTaGTGCCACCCGGGGTGCACACGTCTGAGCGCAGCTGGGCTGGGT +
Preference number: 1 (lower is better)
Translates to: LLAARPAPGRGVHRW*CHPGCTRLSAAGLG
Trigger: ACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCACCATCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CCA 90 bp TGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGATaGTGGTGCCACCCGGGGTGCACACGTCTGAGCGCAGCTGGGCTG +
Preference number: 1 (lower is better)
Translates to: WLLAARPAPGRGVHR*WCHPGCTRLSAAGL
Trigger: CAGCCCAGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCACCATCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 90 bp CTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGATGGTGGTaGCACCCGGGGTGCACACGTCTGAGCGCAGCTGGGCTGGGTGTT +
Preference number: 1 (lower is better)
Translates to: LAARPAPGRGVHRWW*HPGCTRLSAAGLGV
Trigger: AACACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCACCATCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CCA 90 bp CCTCCTCACACCGCCCACAGGCCTCCAGCAGATGCTGCAGGAGCTTaGTCTCGCTGCTCCCCACGTGGCGGCCCCGCGCCATCACTATGG +
Preference number: 1 (lower is better)
Translates to: PPHTAHRPPADAAGA*SRCSPRGGPAPSLW
Trigger: CCATAGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGTGGGCGGTGTGAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 90 bp CCTGGTGCCACCCCAGCACTGCCGCAGACCTGGCCCAGCAGCTCCTaGTCCTTAGCAGGGGATGAGCACGCCCACCACAGCCACCCTCTT +
Preference number: 1 (lower is better)
Translates to: PGATPALPQTWPSSS*SLAGDEHAHHSHPL
Trigger: AAGAGGGTGGCTGTGGTGGGCGTGCTCATCCCCTGCTAAGGAGCAGGAGCTGCTGGGCCAGGTCTGCGGCAGTGCTGGGGTGGCACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR GCA 90 bp CCTGCTCCAGGGCGTGGAGTCCATAGATGGTGGTGCCACCCGGGGTaGACACGTCTGAGCGCAGCTGGGCTGGGTGTTGGCCCTCGTGCA +
Preference number: 1 (lower is better)
Translates to: PAPGRGVHRWWCHPG*TRLSAAGLGVGPRA
Trigger: TGCACGAGGGCCAACACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCACCATCTATGGACTCCACGCCCTGGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CCA 90 bp AGCAGCATCTTGGCCGTCCCCAGCAGGGTCTGGGCAGCGATGCGGTaGGCCAGGCTGCTGGGCATGCCCATCTTGACGGCTCCTTCAGCC +
Preference number: 1 (lower is better)
Translates to: SSILAVPSRVWAAMR*ARLLGMPILTAPSA
Trigger: GGCTGAAGGAGCCGTCAAGATGGGCATGCCCAGCAGCCTGGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGACGGCCAAGATGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 90 bp TGCTCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTaGAGCAGTTGGGGCCAGCGTGGGACTGGAGGCCCAGGTGAATCT +
Preference number: 1 (lower is better)
Translates to: CSRLTSRGCWAEAES*SSWGQRGTGGPGES
Trigger: AGATTCACCTGGGCCTCCAGTCCCACGCTGGCCCCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CCA 90 bp CCCGCGCCATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCAGCAGCTCCT +
Preference number: 1 (lower is better)
Translates to: PAPSLWPLPGPHRAG*ARPAAPVCLGAAAP
Trigger: AGGAGCTGCTGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CCA 90 bp CTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTaGGGCCAGCGTGGGACTGGAGGCCCAGGTGAATCTTGTGGGGCA +
Preference number: 1 (lower is better)
Translates to: LTSRGCWAEAESCSS*GQRGTGGPGESCGA
Trigger: TGCCCCACAAGATTCACCTGGGCCTCCAGTCCCACGCTGGCCCCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CCA 90 bp GTGCCGAGAACTGAGCCCGTGTCTTTGTCACAGGCCCTCACCAGCTaGGCCAGGAGTGGCTGGCTTGGGATCTCCACCTCCCGAGCTGAG +
Preference number: 1 (lower is better)
Translates to: VPRTEPVSLSQALTS*ARSGWLGISTSRAE
Trigger: CTCAGCTCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTGTGACAAAGACACGGGCTCAGTTCTCGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR GCA 90 bp GTCCTGCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTaGTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAG +
Preference number: 1 (lower is better)
Translates to: VLQVPLALFCTGGLI*SGAQGDGTAGPAAQ
Trigger: CTGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CCA 90 bp GAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTaGCTGGCCAGGGCCACCCTCCCAGACCTCAAGCCACCCCACCTA +
Preference number: 1 (lower is better)
Translates to: EGACIQTKARGLHVS*LARATLPDLKPPHL
Trigger: TAGGTGGGGTGGCTTGAGGTCTGGGAGGGTGGCCCTGGCCAGCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CCA 90 bp CCCCTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTaGAGGGGCCAAGTCTTGCCATCAGAGGCCAGTGTGGTGGTGCCA +
Preference number: 1 (lower is better)
Translates to: PLSPGFPDLPSVRDR*RGQVLPSEASVVVP
Trigger: TGGCACCACCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR TCA 90 bp TCTCTTGTGCAGACCCCATATGGCTCGTGCCCCCTAGAGCTGAGATaGGGCAGCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAG +
Preference number: 1 (lower is better)
Translates to: SLVQTPYGSCPLELR*GSRPGCSCTEPPGK
Trigger: CTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGCTGCCTCATCTCAGCTCTAGGGGGCACGAGCCATATGGGGTCTGCACAAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR TCA 90 bp CCTCTGCCAGGACAGCTGGCAGCACATGAGGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCAGCACCTCCTGGTTGGAGTGCGTGG +
Preference number: 1 (lower is better)
Translates to: PLPGQLAAHEAWWQR*RAGSSAAPPGWSAW
Trigger: CCACGCACTCCAACCAGGAGGTGCTGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR TCA 90 bp GTGGTGACCACAGGAGCCACCTCTGCCAGGACAGCTGGCAGCACATaGGGCTTGGTGGCAAAGATGACGAGCAGGCAGCTCTGCAGCACC +
Preference number: 1 (lower is better)
Translates to: VVTTGATSARTAGST*GLVAKMTSRQLCST
Trigger: GGTGCTGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAGGTGGCTCCTGTGGTCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 90 bp AGAAGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTaGTGCTGTCCTGCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGG +
Preference number: 1 (lower is better)
Translates to: RSPWPQRQLSMRDGA*CCPAGAVSPVLHWW
Trigger: CCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR GCA 90 bp TCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTaGAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTG +
Preference number: 1 (lower is better)
Translates to: SLGPLRTNVAARWAH*SKGQSHHHGAFCSL
Trigger: CAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR GCA 90 bp TTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAGTCTTaGCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTC +
Preference number: 1 (lower is better)
Translates to: FLTCRPLGTGGGAKS*HQRPVWWCQSYGVF
Trigger: GAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR GCA 90 bp AGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTaGTGTCCTGCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATT +
Preference number: 1 (lower is better)
Translates to: SPWPQRQLSMRDGAC*CPAGAVSPVLHWWI
Trigger: AATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CCA 90 bp AAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTC +
Preference number: 1 (lower is better)
Translates to: KTPSLGPLRTNVAAR*AHCSKGQSHHHGAF
Trigger: GAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR CCA 90 bp GCGTGCTGCTGTCCTGCAGGTGCCGTTAGCCCTGTTTTGCACTGGTaGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACC +
Preference number: 1 (lower is better)
Translates to: ACCCPAGAVSPVLHW*IDLLRRTGRWHSRT
Trigger: GGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGACAGCAGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CCA 90 bp GGAGCGTGCTGCTGTCCTGCAGGTGCCGTTAGCCCTGTTTTGCACTaGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGG +
Preference number: 1 (lower is better)
Translates to: GACCCPAGAVSPVLH*WIDLLRRTGRWHSR
Trigger: CCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGACAGCAGCACGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR TCA 90 bp GGCCCTAGAACCCTAGCCTTCAATCCTGGGGGTTTGCTTCTCCCCTaGGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGA +
Preference number: 1 (lower is better)
Translates to: GPRTLAFNPGGLLLP*VLAFLTCRPLGTGG
Trigger: TCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAGGGGAGAAGCAAACCCCCAGGATTGAAGGCTAGGGTTCTAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR TCA 90 bp CTGCTGTCCACAGTGCCAGCACCCCCTTCGGCTGACACCTGTGCTTaGCCAAGGTTCCAGGCCTCAACTTATGGGGCAGGCATTGGACCT +
Preference number: 1 (lower is better)
Translates to: LLSTVPAPPSADTCA*PRFQASTYGAGIGP
Trigger: AGGTCCAATGCCTGCCCCATAAGTTGAGGCCTGGAACCTTGGTCAAGCACAGGTGTCAGCCGAAGGGGGTGCTGGCACTGTGGACAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR GCA 90 bp GGGATGGAGCGTGCTGCTGTCCTGCAGGTGCCGTTAGCCCTGTTTTaGACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACA +
Preference number: 1 (lower is better)
Translates to: GMERAAVLQVPLALF*TGGLICSGAQGDGT
Trigger: TGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGACAGCAGCACGCTCCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CCA 90 bp ACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTaGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAG +
Preference number: 1 (lower is better)
Translates to: TNCPTMRANDQDAIS*APQNQCCSKVGSLQ
Trigger: CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR CCA 90 bp AAGTCAATGATTTCTCCTTGCAGATGGGCTTGGTGTGAATGCAGGTaGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGGGGCCGCCTGC +
Preference number: 1 (lower is better)
Translates to: KSMISPCRWAWCECR*PSEGLSTFLQGAAC
Trigger: GCAGGCGGCCCCCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGCAAGGAGAAATCATTGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR GCA 90 bp GGTGCAAAGTCAATGATTTCTCCTTGCAGATGGGCTTGGTGTGAATaGAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGGGGCC +
Preference number: 1 (lower is better)
Translates to: GAKSMISPCRWAWCE*RWPSEGLSTFLQGA
Trigger: GGCCCCCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGCAAGGAGAAATCATTGACTTTGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACG +
Preference number: 1 (lower is better)
Translates to: TRHWASRACYRKFCS*PQPTAQPCGQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR GCA 90 bp TCCCAGGGGGAGACAGGTGTTGGTGCAAAGTCAATGATTTCTCCTTaGAGATGGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTG +
Preference number: 1 (lower is better)
Translates to: SQGETGVGAKSMISP*RWAWCECRWPSEGL
Trigger: CAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGCAAGGAGAAATCATTGACTTTGCACCAACACCTGTCTCCCCCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CCA 90 bp GGGGAGACAGGTGTTGGTGCAAAGTCAATGATTTCTCCTTGCAGATaGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACC +
Preference number: 1 (lower is better)
Translates to: GETGVGAKSMISPCR*AWCECRWPSEGLST
Trigger: GGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGCAAGGAGAAATCATTGACTTTGCACCAACACCTGTCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR TCA 90 bp AGTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATaGCCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAG +
Preference number: 1 (lower is better)
Translates to: SSVHGLNQLPNHAGK*PRRHLLGPSEPMLQ
Trigger: CTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR GCA 90 bp TGTTACCGTAAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCATaGGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACC +
Preference number: 1 (lower is better)
Translates to: CYRKFCSWPQPTAQP*GQMTKTPSLGPLRT
Trigger: GGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR TCA 90 bp TGTTGGTGCAAAGTCAATGATTTCTCCTTGCAGATGGGCTTGGTGTaGATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGG +
Preference number: 1 (lower is better)
Translates to: CWCKVNDFSLQMGLV*MQVAVRRAVHLPSG
Trigger: CCCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGCAAGGAGAAATCATTGACTTTGCACCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CCA 90 bp ACAGGTGTTGGTGCAAAGTCAATGATTTCTCCTTGCAGATGGGCTTaGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTT +
Preference number: 1 (lower is better)
Translates to: TGVGAKSMISPCRWA*CECRWPSEGLSTFL
Trigger: AAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGCAAGGAGAAATCATTGACTTTGCACCAACACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CCA 90 bp AACCCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTTCCACTTTTCCTGTACAGCTCTGGG +
Preference number: 1 (lower is better)
Translates to: NPELESDIGSCLLVH*PVCAELPLFLYSSG
Trigger: CCCAGAGCTGTACAGGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp GGTGGCAGCCTCCACGGCGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGCCAAGTCCTGCCCCCTaGATTTCCCTGTGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: GGSLHGAHGGCSQPALLQPSPAP*ISLCKG
Trigger: CCCCTTGCACAGGGAAATGCAGGGGGCAGGACTTGG...CTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGGCTGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGCTCGCAGCCCGCCCTaGTCCAGGGCGTGGAGTCCA +
Preference number: 2 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREARSPP*SRAWSP
Trigger: TGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGGCGCTCATGGTGGCTaGTCGCAGCCCGCCCTGCTC +
Preference number: 2 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREGAHGG*SQPALL
Trigger: GAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CAA 90 bp ACCTCCTCACACCGCCCACAGGCCTCCAGCAGATGCTGCAGGAGCTaGGTCTCGCTGCTCCCCACGTGGCGGCCCCGCGCCATCACTATG +
Preference number: 2 (lower is better)
Translates to: TSSHRPQASSRCCRS*VSLLPTWRPRAITM
Trigger: CATAGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGTGGGCGGTGTGAGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGTGGGCAGCGATGCGGTaGGCCAGGCTGCTGGGCATG +
Preference number: 2 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREWAAMR*ARLLGM
Trigger: CATGCCCAGCAGCCTGGCCCACCGCATCGCTGCCCA...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp AGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTGCTGTCCTCCACTGCCCACCTGGTaGCACCCCAGCACTGCCGCA +
Preference number: 2 (lower is better)
Translates to: SPWPQRQLSMRDGACCCPPLPTW*HPSTAA
Trigger: TGCGGCAGTGCTGGGGTGGCACCAGGTGGGCAGTGG...AGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp CCACCTCCCGAGCTGAGCTCACCTAGTGCCCAGGGCTTGTCAGAGGTCCCAGGGGGTCTGCATGTGTCCTaGCTGGCCAGGGCCACCCTC +
Preference number: 2 (lower is better)
Translates to: PPPELSSPSAQGLSEVPGGLHVS*LARATL
Trigger: GAGGGTGGCCCTGGCCAGCCAGGACACATGCAGACC...CCCTGGGACCTCTGACAAGCCCTGGGCACTAGGTGAGCTCAGCTCGGGAGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGAGGTCTGCATGTGTCCTaGCTGGCCAGGGCCACCCTC +
Preference number: 2 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGGLHVS*LARATL
Trigger: GAGGGTGGCCCTGGCCAGCCAGGACACATGCAGACC...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGCCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCC +
Preference number: 2 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREPHRAG*ARPAAP
Trigger: GGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CAA 90 bp GCAGGAAAGGATGGCCAGAGCCCAGCCTACTTTCTGCTGAGCTCCTaGGCCCGGCAGGTGGCAGCCTCCACGGCGCTCATGGTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: AGKDGQSPAYFLLSS*ARQVAASTALMVAA
Trigger: AGCAGCCACCATGAGCGCCGTGGAGGCTGCCACCTGCCGGGCCAAGGAGCTCAGCAGAAAGTAGGCTGGGCTCTGGCCATCCTTTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CAA 90 bp CTCACCACAACGCTCCCTGCCGTGCCGAGAACTGAGCCCGTGTCTTaGTCACAGGCCCTCACCAGCTGGGCCAGGAGTGGCTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: LTTTLPAVPRTEPVS*SQALTSWARSGWLG
Trigger: CCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTGTGACAAAGACACGGGCTCAGTTCTCGGCACGGCAGGGAGCGTTGTGGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR TCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCACCCCTAGAGCTGAGATaGGGCAGCCGGCCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPPLELR*GSRPGC
Trigger: ACAGCCAGGCCGGCTGCCTCATCTCAGCTCTAGGGG...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCAGCACACCACGGTGCCTTCTaGTCACTGGGGAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: PHRAGWARPAAPVCLGAAHHGAF*SLGREE
Trigger: CTCCTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTG...TGCTGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp TGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGGGGCCGCCTGCACCGGAGGGGCCAAGTCTTaGCATCAGAGGCCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: CRWPSEGLSTFLQGAACTGGAKS*HQRPVW
Trigger: CCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCC...GGTGCAGGCGGCCCCCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR GCA 90 bp TGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGGGGCCGCCTGCACCAGGGATGGAGCGTGCTaGTGTCCTGCAGGTGCCGTT +
Preference number: 2 (lower is better)
Translates to: CRWPSEGLSTFLQGAACTRDGAC*CPAGAV
Trigger: AACGGCACCTGCAGGACAGCAGCACGCTCCATCCCT...GGTGCAGGCGGCCCCCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR GCA 90 bp CGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGAGCCTCCAGCAGATGCTaGAGGAGCTTGGTCTCGCTG +
Preference number: 2 (lower is better)
Translates to: RSWWLLAARPAPGRGVHRASSRC*RSLVSL
Trigger: CAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGC...TCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp TCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGATGGCTCTGCAGCACCTCCTaGTTGGAGTGCGTGGTCCGG +
Preference number: 2 (lower is better)
Translates to: SWWLLAARPAPGRGVHRWLCSTS*LECVVR
Trigger: CCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAG...CCATCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR TCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAGTATTCCAGGACCCCTaGCCTAGGCACGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPVFQDP*PRHGAG
Trigger: TCCTGCCCCGTGCCTAGGTCAGGGGTCCTGGAATAC...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGCCGCCCAGCCTCGCTaGGGGCATGCTCCCGCCTCA +
Preference number: 2 (lower is better)
Translates to: VPLALFCTGGLICSGAQGAAQPR*GHAPAS
Trigger: TGAGGCGGGAGCATGCCCTCAGCGAGGCTGGGCGGC...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCGGGGTGCACACGTCTaGGCGCAGCTGGGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPRGAHV*AQLGWV
Trigger: CACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGACCAAGTCCTGCCCCCTaGATTTCCCTGTGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGPSPAP*ISLCKG
Trigger: CCCCTTGCACAGGGAAATGCAGGGGGCAGGACTTGG...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCACGGCCTGGCTGTAGCTaGACGGAGCCACCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPRPGCS*TEPPGK
Trigger: CTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCG...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGAGGCCCCTGGCTTTACTaGAGGGGAGAGGGTCTCTTG +
Preference number: 2 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGGPWLY*RGEGLL
Trigger: CAAGAGACCCTCTCCCCTGCAGTAAAGCCAGGGGCC...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATGGCCCAGCAGCTCCTaGTCCTTAGCAGGGGATGAG +
Preference number: 2 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGWPSSS*SLAGDE
Trigger: CTCATCCCCTGCTAAGGAGCAGGAGCTGCTGGGCCA...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGTGCCACCCCAGCACTaGCGCAGACCTGGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPVPPQH*RRPGPA
Trigger: TGCTGGGCCAGGTCTGCGGCAGTGCTGGGGTGGCAC...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGTCCATAGATGGTGGTaGCACCCGGGGTGCACACGT +
Preference number: 2 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREVHRWW*HPGCTR
Trigger: ACGTGTGCACCCCGGGTGGCACCACCATCTATGGAC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp GCAGATGGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCGGCTCCCCCGCCTGCTaGAACCTCCCAAGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: ADGLGVNAGGRQKGCPPSGSPAC*NLPSPA
Trigger: GGCAGGACTTGGGAGGTTCCAGCAGGCGGGGGAGCC...GGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGGGGCCCAGAGCCACCTaGCCACTTGTCAGGAGCTTA +
Preference number: 2 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWGPRAT*PLVRSL
Trigger: TAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCC...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp GCCTGTAGCAGGCATGGGGAGACCTCTGCTGTCCACAGTGCCAGCACCCCCTTCAAGGGCAGAAGTCCGTaGCCGCAGAGGCAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: ACSRHGETSAVHSASTPFKGRSP*PQRQLS
Trigger: GCTCAGCTGCCTCTGCGGCCACGGACTTCTGCCCTT...GAAGGGGGTGCTGGCACTGTGGACAGCAGAGGTCTCCCCATGCCTGCTACAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CCA 90 bp CGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGAACTATGGCCCCTTCCTaGACCACACAGGGCAGGTTG +
Preference number: 2 (lower is better)
Translates to: RSWWLLAARPAPGRGVHRTMAPS*TTQGRL
Trigger: CAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGT...TCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR TCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREAWWQR*RAGSSA
Trigger: TGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 2 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLSRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGAGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGEPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp ATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCGAGCCACCACCACGGTaGCTTCTGCTCACTGGGGAG +
Preference number: 2 (lower is better)
Translates to: ITMAPSWTTQGRLGKTRSEPPPR*LLLTGE
Trigger: CTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTC...GCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAGCAAGGTGGGCTCACTaGAGCAAGGGGCAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQARWAH*SKGQSH
Trigger: GTGGCTCTGCCCCTTGCTGCAGTGAGCCCACCTTGC...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCTCGCTGAGGGCATaGTCCCGCCTCACCTCCAGA +
Preference number: 2 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPASLRA*SRLTSR
Trigger: TCTGGAGGTGAGGCGGGAGCATGCCCTCAGCGAGGC...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCAGCACAGCTCTGGGAGGCATaGGGTACTGCCAGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: PHRAGWARPAAPVCLGAAQLWEA*GTARFH
Trigger: GTGAAACCTGGCAGTACCGCATGCCTCCCAGAGCTG...TGCTGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGGGTCTGGGCAGCGATaGGGTGGGCCAGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: ASTNCPTMRANDQDAISWGSGQR*GGPGCW
Trigger: CCAGCAGCCTGGCCCACCGCATCGCTGCCCAGACCC...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGTGTGCAGACCCCATATaGCTCGTGCCCCCTAGAGCT +
Preference number: 2 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWCADPI*LVPPRA
Trigger: AGCTCTAGGGGGCACGAGCCATATGGGGTCTGCACA...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAATCAGGCCAGGGCCCCTaGCTTTACTGCAGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQSGQGP*LYCRGE
Trigger: CTCTCCCCTGCAGTAAAGCCAGGGGCCCTGGCCTGA...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp CAGGCCCTCACCAGCTGGGCCAGGAGTGGCTGGCTTGGGATCTCCACCTCCCGACCTAGCCTTCAATCCTaGGGGTTTGCTTCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: QALTSWARSGWLGISTSRPSLQS*GFASPL
Trigger: CAGGGGAGAAGCAAACCCCCAGGATTGAAGGCTAGG...TCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCGTCCCCAGCAGGGTCTaGGCAGCGATGCGGTGGGCC +
Preference number: 2 (lower is better)
Translates to: LFMASTNCPTMRANDQDAVPSRV*AAMRWA
Trigger: GGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGAC...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CAA 90 bp GCTGCTGTCCTGCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATaGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCC +
Preference number: 2 (lower is better)
Translates to: AAVLQVPLALFCTGG*ICSGAQGDGTAGPA
Trigger: GGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGACAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAGGTTTGCTTCTCCCCTaGGTCCTGGCTTTCCTGACC +
Preference number: 2 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPGLLLP*VLAFLT
Trigger: GGTCAGGAAAGCCAGGACTCAGGGGAGAAGCAAACC...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCGAGCCACCACCACGGTaGCTTCTGCTCACTGGGGAG +
Preference number: 2 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLEPPPR*LLLTGE
Trigger: CTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTC...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCGCAAGGTGGGCTCACTaGAGCAAGGGGCAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLARWAH*SKGQSH
Trigger: GTGGCTCTGCCCCTTGCTGCAGTGAGCCCACCTTGC...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGACCAACTGCCCAACCATaGGGGCAAATGACCAAGACG +
Preference number: 2 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGPTAQP*GQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAATGGCCCAGCAGCTCCTaGTCCTTAGCAGGGGATGAG +
Preference number: 2 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQWPSSS*SLAGDE
Trigger: CTCATCCCCTGCTAAGGAGCAGGAGCTGCTGGGCCA...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGTGCCACCCCAGCACTaGCGCAGACCTGGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: VPLALFCTGGLICSGAQGVPPQH*RRPGPA
Trigger: TGCTGGGCCAGGTCTGCGGCAGTGCTGGGGTGGCAC...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGCCACTGCCCACCTGGTaGCACCCCAGCACTGCCGCA +
Preference number: 2 (lower is better)
Translates to: ASTNCPTMRANDQDAISWPLPTW*HPSTAA
Trigger: TGCGGCAGTGCTGGGGTGGCACCAGGTGGGCAGTGG...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCCACTGCCCACCTGGTaGCACCCCAGCACTGCCGCA +
Preference number: 2 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGPLPTW*HPSTAA
Trigger: TGCGGCAGTGCTGGGGTGGCACCAGGTGGGCAGTGG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCTGGTGCCACCCGGGGTaGACACGTCTGAGCGCAGCT +
Preference number: 2 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPWCHPG*TRLSAA
Trigger: AGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCA...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp CCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCAGCAAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: PHRAGWARPAAPVCLGAANVAAR*AHCSKG
Trigger: CCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATT...TGCTGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: CSKGQSHHHGAFCSLGRENVAAR*AHCSKG
Trigger: CCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATT...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR CCA 90 bp ACAGGCCTCCAGCAGATGCTGCAGGAGCTTGGTCTCGCTGCTCCCCACGTGGCGAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: TGLQQMLQELGLAAPHVANVAAR*AHCSKG
Trigger: CCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATT...CGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCTCAGGCCAGGGCCCCTaGCTTTACTGCAGGGGAGAG +
Preference number: 2 (lower is better)
Translates to: LPSEASVVVPELRGIPGPSGQGP*LYCRGE
Trigger: CTCTCCCCTGCAGTAAAGCCAGGGGCCCTGGCCTGA...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp GGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGACCTCCAGAGGCTGTTaGGCGGAAGCCGAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: GLGVNAGGRQKGCPPSFRTSRGC*AEAESC
Trigger: GCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGT...CCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CCA 90 bp ATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCCCTGGTTGGAGTGCGTaGTCCGGCAACCCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: ITMAPSWTTQGRLGKTRSPGWSA*SGNPEL
Trigger: AAGCTCTGGGTTGCCGGACCACGCACTCCAACCAGG...GCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR TCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCCCCCTAGAGCTGAGATaGGGCAGCCGGCCTGGCTGT +
Preference number: 2 (lower is better)
Translates to: LFMASTNCPTMRANDQDAPLELR*GSRPGC
Trigger: ACAGCCAGGCCGGCTGCCTCATCTCAGCTCTAGGGG...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCTCCTTAGCAGGGGATaGGCACGCCCACCACAGCCA +
Preference number: 2 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLLLSRG*ARPPQP
Trigger: TGGCTGTGGTGGGCGTGCTCATCCCCTGCTAAGGAG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGTATTCCAGGACCCCTaGCCTAGGCACGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLVFQDP*PRHGAG
Trigger: TCCTGCCCCGTGCCTAGGTCAGGGGTCCTGGAATAC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCCACGCCACTGCCACTaGGGCCAGTGTGGATGTCGA +
Preference number: 2 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLPRHCH*GQCGCR
Trigger: TCGACATCCACACTGGCCTCAGTGGCAGTGGCGTGG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR TCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCTGGGCATGCCCATCTTaGCGGCTCCTTCAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPWACPS*RLLQPG
Trigger: CCCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCA...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCCCAAGTCCTGCCCCCTaGATTTCCCTGTGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLPSPAP*ISLCKG
Trigger: CCCCTTGCACAGGGAAATGCAGGGGGCAGGACTTGG...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCCACCACGGTGCCTTCTaGTCACTGGGGAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAHHGAF*SLGREE
Trigger: CTCCTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTG...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGCACCACGGTGCCTTCTaGTCACTGGGGAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQHHGAF*SLGREE
Trigger: CTCCTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTG...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGCAAGGTGGGCTCACTaGAGCAAGGGGCAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLARWAH*SKGQSH
Trigger: GTGGCTCTGCCCCTTGCTGCAGTGAGCCCACCTTGC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWPQNQC*SKVGSL
Trigger: CAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGG...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CGCGCCATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCCAACTGCCCAACCATaGGGGCAAATGACCAAGACG +
Preference number: 2 (lower is better)
Translates to: RAITMAPSWTTQGRLGKTPTAQP*GQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG...GGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGGGAGAGGGTCTCTTGTaGAGACCCCATATGGCTCGT +
Preference number: 2 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLGEGLL*RPHMAR
Trigger: ACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCC...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGGCCCCTGGCTTTACTaGAGGGGAGAGGGTCTCTTG +
Preference number: 2 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPGPWLY*RGEGLL
Trigger: CAAGAGACCCTCTCCCCTGCAGTAAAGCCAGGGGCC...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCACCCCACCTACCACTaGCCACCTGGTGCCACCCCA +
Preference number: 2 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGHPTYH*PPGATP
Trigger: TGGGGTGGCACCAGGTGGGCAGTGGTAGGTGGGGTG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGCCTCGCTGAGGGCATaGTCCCGCCTCACCTCCAGA +
Preference number: 2 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTASLRA*SRLTSR
Trigger: TCTGGAGGTGAGGCGGGAGCATGCCCTCAGCGAGGC...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGGCTCCCCCGCCTGCTaGAACCTCCCAAGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWGSPAC*NLPSPA
Trigger: GGCAGGACTTGGGAGGTTCCAGCAGGCGGGGGAGCC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR CCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAGGCTCCCCCGCCTGCTaGAACCTCCCAAGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: TRHWASRACYRKFCSWPQGSPAC*NLPSPA
Trigger: GGCAGGACTTGGGAGGTTCCAGCAGGCGGGGGAGCC...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAATGTGCAGACCCCATATaGCTCGTGCCCCCTAGAGCT +
Preference number: 2 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQCADPI*LVPPRA
Trigger: AGCTCTAGGGGGCACGAGCCATATGGGGTCTGCACA...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGGTCTGCATGTGTCCTaGCTGGCCAGGGCCACCCTC +
Preference number: 2 (lower is better)
Translates to: ASTNCPTMRANDQDAISWGLHVS*LARATL
Trigger: GAGGGTGGCCCTGGCCAGCCAGGACACATGCAGACC...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp GGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGCAGAGGCCAGTGTGGTaGTGCCAGAGCTACGGGGTA +
Preference number: 2 (lower is better)
Translates to: GLGVNAGGRQKGCPPSFRQRPVW*CQSYGV
Trigger: TACCCCGTAGCTCTGGCACCACCACACTGGCCTCTG...CCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGCAGCACCTCCTGGTTaGAGTGCGTGGTCCGGCAAC +
Preference number: 2 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLAAPPG*SAWSGN
Trigger: GTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CAA 90 bp GCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATaGGGAGGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: AGGPRATWPLVRSLG*GGKREPVSRLKPGV
Trigger: GACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCCTCCCAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CAA 90 bp TTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAGTCTaGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATT +
Preference number: 2 (lower is better)
Translates to: FPDLPSVRDRWRGQV*PSEASVVVPELRGI
Trigger: AATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CAA 90 bp AGGGATGGAGCGTGCTGCTGTCCTGCAGGTGCCGTTAGCCCTGTTTaGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCAC +
Preference number: 2 (lower is better)
Translates to: RDGACCCPAGAVSPV*HWWIDLLRRTGRWH
Trigger: GTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGACAGCAGCACGCTCCATCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGTATTCCAGGACCCCTaGCCTAGGCACGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: VPLALFCTGGLICSGAQGVFQDP*PRHGAG
Trigger: TCCTGCCCCGTGCCTAGGTCAGGGGTCCTGGAATAC...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp ATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCAGATGTGTTCAGTGGTaGCCACAGGAGCCACCTCTG +
Preference number: 2 (lower is better)
Translates to: ITMAPSWTTQGRLGKTRSRCVQW*PQEPPL
Trigger: CAGAGGTGGCTCCTGTGGTCACCACTGAACACATCT...GCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 2 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQSRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACCAAGTCCTGCCCCCTaGATTTCCCTGTGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRPSPAP*ISLCKG
Trigger: CCCCTTGCACAGGGAAATGCAGGGGGCAGGACTTGG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPEPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGAGCCACCACCACGGTaGCTTCTGCTCACTGGGGAG +
Preference number: 2 (lower is better)
Translates to: VPLALFCTGGLICSGAQGEPPPR*LLLTGE
Trigger: CTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTC...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCAAGGTGGGCTCACTaGAGCAAGGGGCAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: ASTNCPTMRANDQDAISWARWAH*SKGQSH
Trigger: GTGGCTCTGCCCCTTGCTGCAGTGAGCCCACCTTGC...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAATGGCCTCAACCAACTaGCCAACCATGCGGGCAAAT +
Preference number: 2 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPMASTN*PTMRAN
Trigger: ATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCAT...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCAATGGCCTCAACCAACTaGCCAACCATGCGGGCAAAT +
Preference number: 2 (lower is better)
Translates to: AGLAVAARSHLESQRQAPMASTN*PTMRAN
Trigger: ATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCAT...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGACGGCCTGGCTGTAGCTaGACGGAGCCACCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: VPLALFCTGGLICSGAQGRPGCS*TEPPGK
Trigger: CTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCG...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCTGGCCCAGCAGCTCCTaGTCCTTAGCAGGGGATGAG +
Preference number: 2 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPWPSSS*SLAGDE
Trigger: CTCATCCCCTGCTAAGGAGCAGGAGCTGCTGGGCCA...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCCTAAAGCCAGGGGTCTaGATGTGTCCTGGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LPSEASVVVPELRGIPGPLKPGV*MCPGWP
Trigger: TGGCCAGCCAGGACACATGCAGACCCCTGGCTTTAG...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCAGGCCAGTGTGGTGGTaGCAGAGCTACGGGGTATTC +
Preference number: 2 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPRPVWW*QSYGVF
Trigger: GAATACCCCGTAGCTCTGGCACCACCACACTGGCCT...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCGGAGGGGCCAAGTCTTaGCATCAGAGGCCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPGGAKS*HQRPVW
Trigger: CCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCC...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCCAGCTCTGGGAGGCATaGGGTACTGCCAGGTTTCAC +
Preference number: 2 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLQLWEA*GTARFH
Trigger: GTGAAACCTGGCAGTACCGCATGCCTCCCAGAGCTG...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCCACAGGAGCCACCTCTaGCAGGACAGCTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: LFMASTNCPTMRANDQDAHRSHL*QDSWQH
Trigger: GTGCTGCCAGCTGTCCTGGCAGAGGTGGCTCCTGTG...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCAGGCCTCCAGCAGATaGTGCAGGAGCTTGGTCTCG +
Preference number: 2 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLQASSR*CRSLVS
Trigger: CGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGGCTCCCCCGCCTGCTaGAACCTCCCAAGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: VLFMASTNCPTMRANDQDGSPAC*NLPSPA
Trigger: GGCAGGACTTGGGAGGTTCCAGCAGGCGGGGGAGCC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR CCA 90 bp AGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCAGGCTCCCCCGCCTGCTaGAACCTCCCAAGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: SRACYRKFCSWPQPTAQPGSPAC*NLPSPA
Trigger: GGCAGGACTTGGGAGGTTCCAGCAGGCGGGGGAGCC...TGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGGGCCCAGAGCCACCTaGCCACTTGTCAGGAGCTTA +
Preference number: 2 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRGPRAT*PLVRSL
Trigger: TAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCAGAGGCCAGTGTGGTaGTGCCAGAGCTACGGGGTA +
Preference number: 2 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLQRPVW*CQSYGV
Trigger: TACCCCGTAGCTCTGGCACCACCACACTGGCCTCTG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCTCCGTTAGGGACAGGTaGAGGGGCCAAGTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPSVRDR*RGQVLP
Trigger: TGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGA...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAACCTCCAGAGGCTGTTaGGCGGAAGCCGAGAGCTGC +
Preference number: 2 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTTSRGC*AEAESC
Trigger: GCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGT...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACCTGGTTGGAGTGCGTaGTCCGGCAACCCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRPGWSA*SGNPEL
Trigger: AAGCTCTGGGTTGCCGGACCACGCACTCCAACCAGG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGATGCTGCAGGAGCTTaGTCTCGCTGCTCCCCACGT +
Preference number: 2 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRDAAGA*SRCSPR
Trigger: ACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAACGTCTGAGCGCAGCTaGGCTGGGTGTTGGCCCTCG +
Preference number: 2 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVATSERS*AGCWPS
Trigger: CGAGGGCCAACACCCAGCCCAGCTGCGCTCAGACGT...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCCGTGGAGTCCATAGATaGTGGTGCCACCCGGGGTGC +
Preference number: 2 (lower is better)
Translates to: LFMASTNCPTMRANDQDARGVHR*WCHPGC
Trigger: GCACCCCGGGTGGCACCACCATCTATGGACTCCACG...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp GGCTCACCACAACGCTCCCTGCCGTGCCGAGAACTGAGCCCGTGTCTTTGTCACCCAGGCCTCAACTTATaGGGCAGGCATTGGACCTTC +
Preference number: 2 (lower is better)
Translates to: GSPQRSLPCRELSPCLCHPGLNL*GRHWTF
Trigger: GAAGGTCCAATGCCTGCCCCATAAGTTGAGGCCTGG...GTGACAAAGACACGGGCTCAGTTCTCGGCACGGCAGGGAGCGTTGTGGTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CAA 90 bp TTGGGATCTCCACCTCCCGAGCTGAGCTCACCTAGTGCCCAGGGCTaGTCAGAGGTCCCAGGGGGAGACAGGTGTTGGTGCAAAGTCAAT +
Preference number: 2 (lower is better)
Translates to: LGSPPPELSSPSAQG*SEVPGGDRCWCKVN
Trigger: ATTGACTTTGCACCAACACCTGTCTCCCCCTGGGACCTCTGACAAGCCCTGGGCACTAGGTGAGCTCAGCTCGGGAGGTGGAGATCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR TCA 90 bp CAGGCCCTCACCAGCTGGGCCAGGAGTGGCTGGCTTGGGATCTCCACCTCCCGATTTATCCACCTCTGGTaGAACATGAGCTCACTTGGT +
Preference number: 2 (lower is better)
Translates to: QALTSWARSGWLGISTSRFIHLW*NMSSLG
Trigger: ACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAA...TCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 2 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGSRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLEPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACACCACGGTGCCTTCTaGTCACTGGGGAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: TRHWASRACYRKFCSWPQHHGAF*SLGREE
Trigger: CTCCTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTG...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAGAGCCACCACCACGGTaGCTTCTGCTCACTGGGGAG +
Preference number: 2 (lower is better)
Translates to: TRHWASRACYRKFCSWPQEPPPR*LLLTGE
Trigger: CTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTC...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: LPSEASVVVPELRGIPGPNVAAR*AHCSKG
Trigger: CCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATT...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGACGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAA +
Preference number: 2 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGRKFCS*PQPTAQ
Trigger: TTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACG...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGATCCGTTAGGGACAGGTaGAGGGGCCAAGTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRSVRDR*RGQVLP
Trigger: TGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGA...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp AGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTGCTGTCCTAGCCCTGTTTTGCACTaGTGGATTGATCTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: SPWPQRQLSMRDGACCCPSPVLH*WIDLLR
Trigger: CCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCT...AGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGCTCTGCCAGGACAGCTaGCAGCACATGAGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQLCQDS*QHMRLG
Trigger: ACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAG...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACTCTGCCAGGACAGCTaGCAGCACATGAGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRLCQDS*QHMRLG
Trigger: ACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACAGCACCCGTGTGTTTaGGGGCAGCAGCTCCTCCAG +
Preference number: 2 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAQHPCV*GQQLLQ
Trigger: CTGGAGGAGCTGCTGCCCCCAAACACACGGGTGCTG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR TCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCAACCATGCGGGCAAATaGCCAAGACGCCATCTCTTG +
Preference number: 2 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPNHAGK*PRRHLL
Trigger: CAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTT...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGTTTGCTTCTCCCCTaGGTCCTGGCTTTCCTGACC +
Preference number: 2 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTGLLLP*VLAFLT
Trigger: GGTCAGGAAAGCCAGGACTCAGGGGAGAAGCAAACC...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGACAGCTGGCAGCACATaGGGCTTGGTGGCAAAGATG +
Preference number: 2 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQTAGST*GLVAKM
Trigger: CATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGT...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 2 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVASRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGAGCCACCACCACGGTaGCTTCTGCTCACTGGGGAG +
Preference number: 2 (lower is better)
Translates to: VLFMASTNCPTMRANDQDEPPPR*LLLTGE
Trigger: CTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp AGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCAGAGCCACCACCACGGTaGCTTCTGCTCACTGGGGAG +
Preference number: 2 (lower is better)
Translates to: SRACYRKFCSWPQPTAQPEPPPR*LLLTGE
Trigger: CTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTC...TGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: GLGVNAGGRQKGCPPSFRPQNQC*SKVGSL
Trigger: CAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGG...CCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACCAACTGCCCAACCATaGGGGCAAATGACCAAGACG +
Preference number: 2 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRPTAQP*GQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCCAACTGCCCAACCATaGGGGCAAATGACCAAGACG +
Preference number: 2 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPPTAQP*GQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp GGCTCACCACAACGCTCCCTGCCGTGCCGAGAACTGAGCCCGTGTCTTTGTCACATGATCTTGGCTCTCTaGAATCTCCGCCTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: GSPQRSLPCRELSPCLCHMILAL*NLRLLD
Trigger: ATCCAGGAGGCGGAGATTGCAGAGAGCCAAGATCAT...GTGACAAAGACACGGGCTCAGTTCTCGGCACGGCAGGGAGCGTTGTGGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR GCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAACCTCCTGGTTGGAGTaGGTGGTCCGGCAACCCAGA +
Preference number: 2 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVATSWLE*VVRQPR
Trigger: TCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGT...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRNVAAR*AHCSKG
Trigger: CCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATT...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCTGTGCAGACCCCATATaGCTCGTGCCCCCTAGAGCT +
Preference number: 2 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGCADPI*LVPPRA
Trigger: AGCTCTAGGGGGCACGAGCCATATGGGGTCTGCACA...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCTGTGCAGACCCCATATaGCTCGTGCCCCCTAGAGCT +
Preference number: 2 (lower is better)
Translates to: LFMASTNCPTMRANDQDACADPI*LVPPRA
Trigger: AGCTCTAGGGGGCACGAGCCATATGGGGTCTGCACA...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAAGAGGCAGGAAAGGATaGCCAGAGCCCAGCCTACTT +
Preference number: 2 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRRGRKG*PEPSLL
Trigger: AAGTAGGCTGGGCTCTGGCCATCCTTTCCTGCCTCT...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR TCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCAACCATGCGGGCAAATaGCCAAGACGCCATCTCTTG +
Preference number: 2 (lower is better)
Translates to: WLYCRGEGLLCRPHMARANHAGK*PRRHLL
Trigger: CAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTT...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR TCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCCTGGCCAGTATGTGCTaGGCTTCCACTTTTCCTGTA +
Preference number: 2 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLLASMC*ASTFPV
Trigger: TACAGGAAAAGTGGAAGCTCAGCACATACTGGCCAG...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp AGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCAAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 2 (lower is better)
Translates to: SRACYRKFCSWPQPTAQPSRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...TGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAEPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLPQNQC*SKVGSL
Trigger: CAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAPQNQC*SKVGSL
Trigger: CAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGG...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCCCAACTGCCCAACCATaGGGGCAAATGACCAAGACG +
Preference number: 2 (lower is better)
Translates to: LFMASTNCPTMRANDQDAPTAQP*GQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGAGAGGGTCTCTTGTaGAGACCCCATATGGCTCGT +
Preference number: 2 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTGEGLL*RPHMAR
Trigger: ACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCC...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 2 (lower is better)
Translates to: VLFMASTNCPTMRANDQDEPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACCAACTGCCCAACCATaGGGGCAAATGACCAAGACG +
Preference number: 2 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAPTAQP*GQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATGGCCTCAACCAACTaGCCAACCATGCGGGCAAAT +
Preference number: 2 (lower is better)
Translates to: LFMASTNCPTMRANDQDAMASTN*PTMRAN
Trigger: ATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCAT...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR GCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCGTTCCTGTCTGTTGGTaGACTGGCCAGTATGTGCTG +
Preference number: 2 (lower is better)
Translates to: LFMASTNCPTMRANDQDAVPVCW*TGQYVL
Trigger: CAGCACATACTGGCCAGTGCACCAACAGACAGGAAC...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCAAGACGCCATCTCTTaGGCCCCTCAGAACCAATGT +
Preference number: 2 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGQDAIS*APQNQC
Trigger: ACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACCTAGCCTTCAATCCTaGGGGTTTGCTTCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAPSLQS*GFASPL
Trigger: CAGGGGAGAAGCAAACCCCCAGGATTGAAGGCTAGG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGATGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTT +
Preference number: 2 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRCLLVH*PVCAEL
Trigger: AAGCTCAGCACATACTGGCCAGTGCACCAACAGACA...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR TCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAAACCATGCGGGCAAATaGCCAAGACGCCATCTCTTG +
Preference number: 2 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVANHAGK*PRRHLL
Trigger: CAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTT...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR TCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACACAGCTGGCAGCACATaGGGCTTGGTGGCAAAGATG +
Preference number: 2 (lower is better)
Translates to: VLFMASTNCPTMRANDQDTAGST*GLVAKM
Trigger: CATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGT...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR GCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGTTCCTGTCTGTTGGTaGACTGGCCAGTATGTGCTG +
Preference number: 2 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWVPVCW*TGQYVL
Trigger: CAGCACATACTGGCCAGTGCACCAACAGACAGGAAC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAA +
Preference number: 2 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPRKFCS*PQPTAQ
Trigger: TTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR CCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAA +
Preference number: 2 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLRKFCS*PQPTAQ
Trigger: TTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR CAA 90 bp TGGTCCGGCAACCCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGTGCTGAGCTTCCACTTTTCCTGTAC +
Preference number: 2 (lower is better)
Translates to: WSGNPELESDIGSCL*VHWPVCAELPLFLY
Trigger: GTACAGGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGGGTTGCCGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR TCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCTTTGCACTGGTGGATTaGTCTGCTCAGGCGCACAGG +
Preference number: 2 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCFALVD*SAQAHR
Trigger: CCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAA...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
3UTR-3UTR CCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCAGCCCTGTTTTGCACTaGTGGATTGATCTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCSPVLH*WIDLLR
Trigger: CCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCT...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
3UTR-3UTR GCA 90 bp ACATTGATCAAAGATACCGTAATCATATCCATCGTTTTCTGTCTTGAAGAACAGGCGGAAGCCGAGAGCTaGAGCAGTTGGGGCCAGCGT +
Preference number: 2 (lower is better)
Translates to: TLIKDTVIISIVFCLEEQAEAES*SSWGQR
Trigger: ACGCTGGCCCCAACTGCTGCAGCTCTCGGCTTCCGC...CTGTTCTTCAAGACAGAAAACGATGGATATGATTACGGTATCTTTGATCAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR GCA 90 bp ACATTGATCAAAGATACCGTAATCATATCCATCGTTTTCTGTCTTGAAGAACAGCCTGACTTTGTGATCTaGCCGCCTCGGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: TLIKDTVIISIVFCLEEQPDFVI*PPRPPK
Trigger: TTTGGGAGGCCGAGGCGGGCAGATCACAAAGTCAGG...CTGTTCTTCAAGACAGAAAACGATGGATATGATTACGGTATCTTTGATCAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CCA 90 bp ACATTGATCAAAGATACCGTAATCATATCCATCGTTTTCTGTCTTGAAGAACAGGCCCAGCCCAGAACTTaGTTTTATCCACCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: TLIKDTVIISIVFCLEEQAQPRT*FYPPLV
Trigger: CACCAGAGGTGGATAAAACCAAGTTCTGGGCTGGGC...CTGTTCTTCAAGACAGAAAACGATGGATATGATTACGGTATCTTTGATCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CCA 72 bp ACGTGGCGGCCCCGCGCCATCACTATGGCCCCTTCCTaGACCACACAGGGCAGGTTGGGCAAGACCCGCAGC +
Preference number: 3 (lower is better)
Translates to: TWRPRAITMAPS*TTQGRLGKTRS
Trigger: GCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGGGCCGCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CCA 72 bp TTGGCCGTCCCCAGCAGGGTCTGGGCAGCGATGCGGTaGGCCAGGCTGCTGGGCATGCCCATCTTGACGGCT +
Preference number: 3 (lower is better)
Translates to: LAVPSRVWAAMR*ARLLGMPILTA
Trigger: AGCCGTCAAGATGGGCATGCCCAGCAGCCTGGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGACGGCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CCA 72 bp GCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGATGGTaGTGCCACCCGGGGTGCACACGTCTGAGCGCAGCT +
Preference number: 3 (lower is better)
Translates to: ARPAPGRGVHRW*CHPGCTRLSAA
Trigger: AGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCACCATCTATGGACTCCACGCCCTGGAGCAGGGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CCA 72 bp GCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGATaGTGGTGCCACCCGGGGTGCACACGTCTGAGCGCA +
Preference number: 3 (lower is better)
Translates to: AARPAPGRGVHR*WCHPGCTRLSA
Trigger: TGCGCTCAGACGTGTGCACCCCGGGTGGCACCACCATCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 72 bp ACCCCAGCACTGCCGCAGACCTGGCCCAGCAGCTCCTaGTCCTTAGCAGGGGATGAGCACGCCCACCACAGC +
Preference number: 3 (lower is better)
Translates to: TPALPQTWPSSS*SLAGDEHAHHS
Trigger: GCTGTGGTGGGCGTGCTCATCCCCTGCTAAGGAGCAGGAGCTGCTGGGCCAGGTCTGCGGCAGTGCTGGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR GCA 72 bp CTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTaGAGCAGTTGGGGCCAGCGTGGGACTGGAGGCCCA +
Preference number: 3 (lower is better)
Translates to: LTSRGCWAEAES*SSWGQRGTGGP
Trigger: TGGGCCTCCAGTCCCACGCTGGCCCCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR GCA 72 bp ACCTCCTCACACCGCCCACAGGCCTCCAGCAGATGCTaGAGGAGCTTGGTCTCGCTGCTCCCCACGTGGCGG +
Preference number: 3 (lower is better)
Translates to: TSSHRPQASSRC*RSLVSLLPTWR
Trigger: CCGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGTGGGCGGTGTGAGGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 72 bp GGGCGTGGAGTCCATAGATGGTGGTGCCACCCGGGGTaGACACGTCTGAGCGCAGCTGGGCTGGGTGTTGGC +
Preference number: 3 (lower is better)
Translates to: GRGVHRWWCHPG*TRLSAAGLGVG
Trigger: GCCAACACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCACCATCTATGGACTCCACGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CCA 72 bp GTGGTGCCACCCGGGGTGCACACGTCTGAGCGCAGCTaGGCTGGGTGTTGGCCCTCGTGCAGCAGCATCTTG +
Preference number: 3 (lower is better)
Translates to: VVPPGVHTSERS*AGCWPSCSSIL
Trigger: CAAGATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CAA 90 bp CGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGACTGGGCATGCCCATCTaGACGGCTCCTTCAGCCAGG +
Preference number: 3 (lower is better)
Translates to: RSWWLLAARPAPGRGVHRLGMPI*TAPSAR
Trigger: CCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCAG...TCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR TCA 72 bp TCCATAGATGGTGGTGCCACCCGGGGTGCACACGTCTaGGCGCAGCTGGGCTGGGTGTTGGCCCTCGTGCAG +
Preference number: 3 (lower is better)
Translates to: SIDGGATRGAHV*AQLGWVLALVQ
Trigger: CTGCACGAGGGCCAACACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCACCATCTATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CAA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGCTGGGCATGCCCATCTaGACGGCTCCTTCAGCCAGG +
Preference number: 3 (lower is better)
Translates to: CSKGQSHHHGAFCSLGRELGMPI*TAPSAR
Trigger: CCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCAG...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR CCA 72 bp AGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTaGGGCCAGCGTGGGACTGGAGGCCCAGGTGAATCT +
Preference number: 3 (lower is better)
Translates to: RGCWAEAESCSS*GQRGTGGPGES
Trigger: AGATTCACCTGGGCCTCCAGTCCCACGCTGGCCCCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp CAGGCCCTCACCAGCTGGGCCAGGAGTGGCTGGCTTGGGATCTCCACCTCCCGACCAAGACGCCATCTCTaGGGCCCCTCAGAACCAATG +
Preference number: 3 (lower is better)
Translates to: QALTSWARSGWLGISTSRPRRHL*GPSEPM
Trigger: CATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG...TCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CAA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGGCTCCAGACCAGGCATaGGGCCAGCCGTGCCTGTTA +
Preference number: 3 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLAPDQA*GQPCLL
Trigger: TAACAGGCACGGCTGGCCCAATGCCTGGTCTGGAGC...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR TCA 72 bp CTGGCTCACCACAACGCTCCCTGCCGTGCCGAGAACTaGGCCCGTGTCTTTGTCACAGGCCCTCACCAGCTG +
Preference number: 3 (lower is better)
Translates to: LAHHNAPCRAEN*ARVFVTGPHQL
Trigger: CAGCTGGTGAGGGCCTGTGACAAAGACACGGGCTCAGTTCTCGGCACGGCAGGGAGCGTTGTGGTGAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CCA 72 bp TCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: SLWPLPGPHRAG*ARPAAPVCLGA
Trigger: TGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CAA 90 bp CCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCAGCACCAAGACGCCATCTCTaGGGCCCCTCAGAACCAATG +
Preference number: 3 (lower is better)
Translates to: PHRAGWARPAAPVCLGAAPRRHL*GPSEPM
Trigger: CATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG...TGCTGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CAA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCATGGAGGGGCCAAGTCTaGCCATCAGAGGCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPWRGQV*PSEASV
Trigger: CACACTGGCCTCTGATGGCAAGACTTGGCCCCTCCA...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGCCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACT +
Preference number: 3 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREPSEPM*QQGGLT
Trigger: AGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGG...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR-3UTR CAA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGCCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACT +
Preference number: 3 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWPSEPM*QQGGLT
Trigger: AGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGG...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCGCTCCAGACCAGGCATaGGGCCAGCCGTGCCTGTTA +
Preference number: 3 (lower is better)
Translates to: LPSEASVVVPELRGIPGPAPDQA*GQPCLL
Trigger: TAACAGGCACGGCTGGCCCAATGCCTGGTCTGGAGC...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCTCCAGACCAGGCATaGGGCCAGCCGTGCCTGTTA +
Preference number: 3 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPAPDQA*GQPCLL
Trigger: TAACAGGCACGGCTGGCCCAATGCCTGGTCTGGAGC...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAAGGGGAGAGGGTCTCTaGTGCAGACCCCATATGGCT +
Preference number: 3 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPRGEGL*CRPHMA
Trigger: AGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCT...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp GACACCCCAGCAGCCACGGACACCAAGATGTGTTCAGTGGTGACCACAGGAGCCTGCAGCACCTCCTGGTaGGAGTGCGTGGTCCGGCAA +
Preference number: 3 (lower is better)
Translates to: DTPAATDTKMCSVVTTGACSTSW*ECVVRQ
Trigger: TTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCA...GGCTCCTGTGGTCACCACTGAACACATCTTGGTGTCCGTGGCTGCTGGGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CAA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCTTTCTGCTGAGCTCCTaGGCCCGGCAGGTGGCAGCC +
Preference number: 3 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPFLLSS*ARQVAA
Trigger: GGCTGCCACCTGCCGGGCCAAGGAGCTCAGCAGAAA...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 72 bp TGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAGTCTTaGCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTAC +
Preference number: 3 (lower is better)
Translates to: CRPLGTGGGAKS*HQRPVWWCQSY
Trigger: GTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGACGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR GCA 72 bp CCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTaGTGTCCTGCAGGTGCCGTTAGCCCTGTTTTGCAC +
Preference number: 3 (lower is better)
Translates to: PQRQLSMRDGAC*CPAGAVSPVLH
Trigger: GTGCAAAACAGGGCTAACGGCACCTGCAGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR GCA 72 bp TGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTaGTGCTGTCCTGCAGGTGCCGTTAGCCCTGTTTTG +
Preference number: 3 (lower is better)
Translates to: WPQRQLSMRDGA*CCPAGAVSPVL
Trigger: CAAAACAGGGCTAACGGCACCTGCAGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CCA 72 bp GCTCCCAGGCCTGCCCAGGCTTGGCATACAGTCCCCTaGGGTGACAGCGTGCAGGGGAAACTGCAATTCCAT +
Preference number: 3 (lower is better)
Translates to: APRPAQAWHTVP*GDSVQGKLQFH
Trigger: ATGGAATTGCAGTTTCCCCTGCACGCTGTCACCCCAGGGGACTGTATGCCAAGCCTGGGCAGGCCTGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CAA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCTGGAGGGGCCAAGTCTaGCCATCAGAGGCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPWRGQV*PSEASV
Trigger: CACACTGGCCTCTGATGGCAAGACTTGGCCCCTCCA...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp CGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGAATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 3 (lower is better)
Translates to: RSWWLLAARPAPGRGVHRIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...TCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR TCA 72 bp GGACAGCTGGCAGCACATGAGGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCAGCACCTCCTGGTTGG +
Preference number: 3 (lower is better)
Translates to: GQLAAHEAWWQR*RAGSSAAPPGW
Trigger: CCAACCAGGAGGTGCTGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR TCA 72 bp ACAGTGCCAGCACCCCCTTCGGCTGACACCTGTGCTTaGCCAAGGTTCCAGGCCTCAACTTATGGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: TVPAPPSADTCA*PRFQASTYGAG
Trigger: GCCTGCCCCATAAGTTGAGGCCTGGAACCTTGGTCAAGCACAGGTGTCAGCCGAAGGGGGTGCTGGCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR TCA 72 bp ACCTCTGCTGTCCACAGTGCCAGCACCCCCTTCGGCTaGCACCTGTGCTTGACCAAGGTTCCAGGCCTCAAC +
Preference number: 3 (lower is better)
Translates to: TSAVHSASTPFG*HLCLTKVPGLN
Trigger: GTTGAGGCCTGGAACCTTGGTCAAGCACAGGTGTCAGCCGAAGGGGGTGCTGGCACTGTGGACAGCAGAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CAA 90 bp ATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCCCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACT +
Preference number: 3 (lower is better)
Translates to: ITMAPSWTTQGRLGKTRSPSEPM*QQGGLT
Trigger: AGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGG...GCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CAA 90 bp GGCTCACCACAACGCTCCCTGCCGTGCCGAGAACTGAGCCCGTGTCTTTGTCACTGCAGTGGCATGATCTaGGCTCTCTGCAATCTCCGC +
Preference number: 3 (lower is better)
Translates to: GSPQRSLPCRELSPCLCHCSGMI*ALCNLR
Trigger: GCGGAGATTGCAGAGAGCCAAGATCATGCCACTGCA...GTGACAAAGACACGGGCTCAGTTCTCGGCACGGCAGGGAGCGTTGTGGTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CAA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACAGCTGGGCTGGGTGTaGGCCCTCGTGCAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAQLGWV*ALVQQH
Trigger: ATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCTG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 72 bp CAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTGCAGCAAGGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: QDAISWAPQNQC*SKVGSLQQGAE
Trigger: CTCTGCCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR GCA 72 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTaGTCAGGCGCACAGGGAGATGGCACAGCAGGACCC +
Preference number: 3 (lower is better)
Translates to: VPLALFCTGGLI*SGAQGDGTAGP
Trigger: GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR GCA 72 bp CGTGCTGCTGTCCTGCAGGTGCCGTTAGCCCTGTTTTaGACTGGTGGATTGATCTGCTCAGGCGCACAGGGA +
Preference number: 3 (lower is better)
Translates to: RAAVLQVPLALF*TGGLICSGAQG
Trigger: TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGACAGCAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CCA 72 bp GCAGGCAGCTCTGCAGCACCTCCTGGTTGGAGTGCGTaGTCCGGCAACCCAGAGCTTGAAAGTGACATAGGT +
Preference number: 3 (lower is better)
Translates to: AGSSAAPPGWSA*SGNPELESDIG
Trigger: ACCTATGTCACTTTCAAGCTCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAGCTGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR-3UTR CAA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCAGGGGAGAGGGTCTCTaGTGCAGACCCCATATGGCT +
Preference number: 3 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPRGEGL*CRPHMA
Trigger: AGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCT...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCAGGGGAGAGGGTCTCTaGTGCAGACCCCATATGGCT +
Preference number: 3 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLRGEGL*CRPHMA
Trigger: AGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCT...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACATGGAGGGGCCAAGTCTaGCCATCAGAGGCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTWRGQV*PSEASV
Trigger: CACACTGGCCTCTGATGGCAAGACTTGGCCCCTCCA...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGACCAAGACGCCATCTCTaGGGCCCCTCAGAACCAATG +
Preference number: 3 (lower is better)
Translates to: VPLALFCTGGLICSGAQGPRRHL*GPSEPM
Trigger: CATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGCCAAGACGCCATCTCTaGGGCCCCTCAGAACCAATG +
Preference number: 3 (lower is better)
Translates to: ASTNCPTMRANDQDAISWPRRHL*GPSEPM
Trigger: CATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR TCA 72 bp CATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATaGCCAAGACGCCATCTCTTGGGCCCCTCAGAACCA +
Preference number: 3 (lower is better)
Translates to: HGLNQLPNHAGK*PRRHLLGPSEP
Trigger: TGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR CCA 72 bp CCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTaGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: PTMRANDQDAIS*APQNQCCSKVG
Trigger: GCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR CCA 72 bp TGTCCTGCAGGTGCCGTTAGCCCTGTTTTGCACTGGTaGATTGATCTGCTCAGGCGCACAGGGAGATGGCAC +
Preference number: 3 (lower is better)
Translates to: CPAGAVSPVLHW*IDLLRRTGRWH
Trigger: GTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGACCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACT +
Preference number: 3 (lower is better)
Translates to: VPLALFCTGGLICSGAQGPSEPM*QQGGLT
Trigger: AGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGG...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR-3UTR CAA 90 bp GGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGTGGGGTTTCTCCATGTaGGTCAGGTTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: GLGVNAGGRQKGCPPSFRWGFSM*VRLVSN
Trigger: GTTTGAGACCAACCTGACCAACATGGAGAAACCCCA...CCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CCA 72 bp TGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAACCATGCGGGCAAATG +
Preference number: 3 (lower is better)
Translates to: WASRACYRKFCS*PQPTAQPCGQM
Trigger: CATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CCA 72 bp ATTTCTCCTTGCAGATGGGCTTGGTGTGAATGCAGGTaGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGGG +
Preference number: 3 (lower is better)
Translates to: ISPCRWAWCECR*PSEGLSTFLQG
Trigger: CCCCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGCAAGGAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CAA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 3 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 72 bp AAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCATaGGGGCAAATGACCAAGACGCCATCTCTTGGGCCC +
Preference number: 3 (lower is better)
Translates to: KFCSWPQPTAQP*GQMTKTPSLGP
Trigger: GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
3UTR TCA 72 bp AGGTTCCTGTCTGTTGGTGCACTGGCCAGTATGTGCTaGGCTTCCACTTTTCCTGTACAGCTCTGGGAGGCA +
Preference number: 3 (lower is better)
Translates to: RFLSVGALASMC*ASTFPVQLWEA
Trigger: TGCCTCCCAGAGCTGTACAGGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 72 bp CACTTTTCCTGTACAGCTCTGGGAGGCATGCGGTACTaGCAGGTTTCACAGGGAAGACTCCTGAGACTCATA +
Preference number: 3 (lower is better)
Translates to: HFSCTALGGMRY*QVSQGRLLRLI
Trigger: TATGAGTCTCAGGAGTCTTCCCTGTGAAACCTGGCAGTACCGCATGCCTCCCAGAGCTGTACAGGAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
3UTR GCA 72 bp TCAATGATTTCTCCTTGCAGATGGGCTTGGTGTGAATaGAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTT +
Preference number: 3 (lower is better)
Translates to: SMISPCRWAWCE*RWPSEGLSTFL
Trigger: AAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGCAAGGAGAAATCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR-3UTR CAA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCCCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACT +
Preference number: 3 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCPSEPM*QQGGLT
Trigger: AGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGG...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
3UTR GCA 72 bp GAGACAGGTGTTGGTGCAAAGTCAATGATTTCTCCTTaGAGATGGGCTTGGTGTGAATGCAGGTGGCCGTCA +
Preference number: 3 (lower is better)
Translates to: ETGVGAKSMISP*RWAWCECRWPS
Trigger: TGACGGCCACCTGCATTCACACCAAGCCCATCTGCAAGGAGAAATCATTGACTTTGCACCAACACCTGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR TCA 72 bp GCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATaGGCTCACTTGGTGCTCTCTGGCCTCTTTATTCCC +
Preference number: 3 (lower is better)
Translates to: AQNLVLSTSGET*AHLVLSGLFIP
Trigger: GGGAATAAAGAGGCCAGAGAGCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
3UTR CCA 72 bp CTTGAAAGTGACATAGGTTCCTGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTTCCACTTTTCCTGTAC +
Preference number: 3 (lower is better)
Translates to: LESDIGSCLLVH*PVCAELPLFLY
Trigger: GTACAGGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp GGTGGCAGCCTCCACGGCGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGGTCTGGGCAGCGATaGGGTGGGCCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGSLHGAHGGCSQPALLQGSGQR*GGPGCW
Trigger: CCAGCAGCCTGGCCCACCGCATCGCTGCCCAGACCC...CTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGGCTGCCACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR TCA 90 bp TGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGCGGGGTGCACACGTCTaGGCGCAGCTGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: WPLPGPHRAGWARPAAPVRGAHV*AQLGWV
Trigger: CACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCG...CACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR TCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGGCCGCCCAGCCTCGCTaGGGGCATGCTCCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWAAQPR*GHAPAS
Trigger: TGAGGCGGGAGCATGCCCTCAGCGAGGCTGGGCGGC...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGCCGCCCAGCCTCGCTaGGGGCATGCTCCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREAAQPR*GHAPAS
Trigger: TGAGGCGGGAGCATGCCCTCAGCGAGGCTGGGCGGC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGAGGAGCTTGGTCTCGCTaGTCCCCACGTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: RSWWLLAARPAPGRGVHRGAWSR*SPRGGP
Trigger: GGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCC...TCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp GGTGGCAGCCTCCACGGCGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGCTCTGCAGCACCTCCTaGTTGGAGTGCGTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: GGSLHGAHGGCSQPALLQLCSTS*LECVVR
Trigger: CCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAG...CTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGGCTGCCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp GGTGGCAGCCTCCACGGCGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGCCCGCGCCATCACTATaGCCCCTTCCTGGACCACAC +
Preference number: 4 (lower is better)
Translates to: GGSLHGAHGGCSQPALLQPAPSL*PLPGPH
Trigger: GTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGG...CTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGGCTGCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR TCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGGCCGCCCAGCCTCGCTaGGGGCATGCTCCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLAAQPR*GHAPAS
Trigger: TGAGGCGGGAGCATGCCCTCAGCGAGGCTGGGCGGC...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CAGGCCCTCACCAGCTGGGCCAGGAGTGGCTGGCTTGGGATCTCCACCTCCCGAGCTCTGATGAGGCCCTaGGCGATGGCCCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: QALTSWARSGWLGISTSRALMRP*AMAPAM
Trigger: CATGGCGGGGGCCATCGCGCAGGGCCTCATCAGAGC...TCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp ACAGGCCTCCAGCAGATGCTGCAGGAGCTTGGTCTCGCTGCTCCCCACGTGGCGGGAGCTTGGTCTCGCTaGTCCCCACGTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: TGLQQMLQELGLAAPHVAGAWSR*SPRGGP
Trigger: GGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCC...CGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGAGCTCGCAGCCCGCCCTaGTCCAGGGCGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGARSPP*SRAWSP
Trigger: TGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGC...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGCTTCAGGGGGCCGCCTaGACCAGACCCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGRELQGAA*TRPQAP
Trigger: GGGAGCCTGGGGTCTGGTGCAGGCGGCCCCCTGAAG...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp CCACCTCCCGAGCTGAGCTCACCTAGTGCCCAGGGCTTGTCAGAGGTCCCAGGGTCGCTGCTCCCCACGTaGCGGCCCCGCGCCATCACT +
Preference number: 4 (lower is better)
Translates to: PPPELSSPSAQGLSEVPGSLLPT*RPRAIT
Trigger: AGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGA...CCCTGGGACCTCTGACAAGCCCTGGGCACTAGGTGAGCTCAGCTCGGGAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp CAGGCAGCTCTGCAGCACCTCCTGGTTGGAGTGCGTGGTCCGGCAACCCAGAGCTCGCTGCTCCCCACGTaGCGGCCCCGCGCCATCACT +
Preference number: 4 (lower is better)
Translates to: QAALQHLLVGVRGPATQSSLLPT*RPRAIT
Trigger: AGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGA...GCTCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAGCTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp CCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCAGCACCACGGCGCTCATGGTaGCTGCTCGCAGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PHRAGWARPAAPVCLGAAPRRSW*LLAARP
Trigger: AGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGG...TGCTGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGACCACGGCGCTCATGGTaGCTGCTCGCAGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGPRRSW*LLAARP
Trigger: AGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGG...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGCCTTGGCCCGGCAGGTaGCAGCCTCCACGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREPWPGR*QPPRRS
Trigger: TGAGCGCCGTGGAGGCTGCCACCTGCCGGGCCAAGG...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCGGGGTGCACACGTCTaGGCGCAGCTGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRRGAHV*AQLGWV
Trigger: CACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGGAGCTTGGTCTCGCTaGTCCCCACGTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRGAWSR*SPRGGP
Trigger: GGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGGGTCTGGGCAGCGATaGGGTGGGCCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRGSGQR*GGPGCW
Trigger: CCAGCAGCCTGGCCCACCGCATCGCTGCCCAGACCC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGGGGTCTGGGCAGCGATaGGGTGGGCCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLGSGQR*GGPGCW
Trigger: CCAGCAGCCTGGCCCACCGCATCGCTGCCCAGACCC...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGCTCGCAGCCCGCCCTaGTCCAGGGCGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRARSPP*SRAWSP
Trigger: TGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCAGCTCGCAGCCCGCCCTaGTCCAGGGCGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPARSPP*SRAWSP
Trigger: TGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGC...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGGCGCTCATGGTGGCTaGTCGCAGCCCGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRGAHGG*SQPALL
Trigger: GAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAGGCGCTCATGGTGGCTaGTCGCAGCCCGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPGAHGG*SQPALL
Trigger: GAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCC...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGAGTGCCACCCCAGCACTaGCGCAGACCTGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGVPPQH*RRPGPA
Trigger: TGCTGGGCCAGGTCTGCGGCAGTGCTGGGGTGGCAC...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CAGGCCCTCACCAGCTGGGCCAGGAGTGGCTGGCTTGGGATCTCCACCTCCCGAGCCTCGCTGAGGGCATaGTCCCGCCTCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: QALTSWARSGWLGISTSRASLRA*SRLTSR
Trigger: TCTGGAGGTGAGGCGGGAGCATGCCCTCAGCGAGGC...TCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGTCGCTGCTCCCCACGTaGCGGCCCCGCGCCATCACT +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRSLLPT*RPRAIT
Trigger: AGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGA...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAGTCCCCAGCAGGGTCTaGGCAGCGATGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPVPSRV*AAMRWA
Trigger: GGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGAC...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGTCCCCAGCAGGGTCTaGGCAGCGATGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRVPSRV*AAMRWA
Trigger: GGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGAC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp TGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGACGTCTGAGCGCAGCTaGGCTGGGTGTTGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: WPLPGPHRAGWARPAAPVTSERS*AGCWPS
Trigger: CGAGGGCCAACACCCAGCCCAGCTGCGCTCAGACGT...CACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCACCACGGCGCTCATGGTaGCTGCTCGCAGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPPRRSW*LLAARP
Trigger: AGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGG...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCCTCCACGGCGCTCATaGTGGCTGCTCGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRPPRRS*WLLAAR
Trigger: GCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCACCTCCACGGCGCTCATaGTGGCTGCTCGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPPPRRS*WLLAAR
Trigger: GCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGG...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCCTTGGCCCGGCAGGTaGCAGCCTCCACGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRPWPGR*QPPRRS
Trigger: TGAGCGCCGTGGAGGCTGCCACCTGCCGGGCCAAGG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAACGGGGTGCACACGTCTaGGCGCAGCTGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQRGAHV*AQLGWV
Trigger: CACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCG...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGCTCTGATGAGGCCCTaGGCGATGGCCCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRALMRP*AMAPAM
Trigger: CATGGCGGGGGCCATCGCGCAGGGCCTCATCAGAGC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAGGAGCTTGGTCTCGCTaGTCCCCACGTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQGAWSR*SPRGGP
Trigger: GGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCC...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTGCTGTCCTGTGCCACCCCAGCACTaGCGCAGACCTGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SPWPQRQLSMRDGACCCPVPPQH*RRPGPA
Trigger: TGCTGGGCCAGGTCTGCGGCAGTGCTGGGGTGGCAC...AGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCACCACTGCCCACCTGGTaGCACCCCAGCACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPPLPTW*HPSTAA
Trigger: TGCGGCAGTGCTGGGGTGGCACCAGGTGGGCAGTGG...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGCACCCCACCTACCACTaGCCACCTGGTGCCACCCCA +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWHPTYH*PPGATP
Trigger: TGGGGTGGCACCAGGTGGGCAGTGGTAGGTGGGGTG...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGCGGAAGCCGAGAGCTaGAGCAGTTGGGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREAEAES*SSWGQR
Trigger: ACGCTGGCCCCAACTGCTGCAGCTCTCGGCTTCCGC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGTGGGCAGCGATGCGGTaGGCCAGGCTGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRWAAMR*ARLLGM
Trigger: CATGCCCAGCAGCCTGGCCCACCGCATCGCTGCCCA...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp TGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGAGCTGGGCTGGGTGTTaGCCCTCGTGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: WPLPGPHRAGWARPAAPVSWAGC*PSCSSI
Trigger: GATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCT...CACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGGGCTCCCCCGCCTGCTaGAACCTCCCAAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLGSPAC*NLPSPA
Trigger: GGCAGGACTTGGGAGGTTCCAGCAGGCGGGGGAGCC...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGGGGCCGCCTGCACCAAGGGCAGAAGTCCGTaGCCGCAGAGGCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CRWPSEGLSTFLQGAACTKGRSP*PQRQLS
Trigger: GCTCAGCTGCCTCTGCGGCCACGGACTTCTGCCCTT...GGTGCAGGCGGCCCCCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGACAGGCCCTCACCAGCTaGGCCAGGAGTGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGQALTS*ARSGWL
Trigger: AAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTG...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CAA 72 bp ACGCTCCCTGCCGTGCCGAGAACTGAGCCCGTGTCTTaGTCACAGGCCCTCACCAGCTGGGCCAGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: TLPAVPRTEPVS*SQALTSWARSG
Trigger: GCCACTCCTGGCCCAGCTGGTGAGGGCCTGTGACAAAGACACGGGCTCAGTTCTCGGCACGGCAGGGAGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR TCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGCCACGCCACTGCCACTaGGGCCAGTGTGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREPRHCH*GQCGCR
Trigger: TCGACATCCACACTGGCCTCAGTGGCAGTGGCGTGG...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGCCACGCCACTGCCACTaGGGCCAGTGTGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWPRHCH*GQCGCR
Trigger: TCGACATCCACACTGGCCTCAGTGGCAGTGGCGTGG...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATGGGCATGCCCATCTTaGCGGCTCCTTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGWACPS*RLLQPG
Trigger: CCCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCA...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp ACAGGCCTCCAGCAGATGCTGCAGGAGCTTGGTCTCGCTGCTCCCCACGTGGCGTGGGCATGCCCATCTTaGCGGCTCCTTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TGLQQMLQELGLAAPHVAWACPS*RLLQPG
Trigger: CCCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCA...CGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR TCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACGGGGTGCACACGTCTaGGCGCAGCTGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSRGAHV*AQLGWV
Trigger: CACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCCCCTAGAGCTGAGATaGGGCAGCCGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRPLELR*GSRPGC
Trigger: ACAGCCAGGCCGGCTGCCTCATCTCAGCTCTAGGGG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGAACCTCCTGGTTGGAGTaGGTGGTCCGGCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: RSWWLLAARPAPGRGVHRTSWLE*VVRQPR
Trigger: TCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGT...TCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGCACAGGAGCCACCTCTaGCAGGACAGCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREHRSHL*QDSWQH
Trigger: GTGCTGCCAGCTGTCCTGGCAGAGGTGGCTCCTGTG...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGCAGCTCCTCCAGGGTaGTCAGAGACACCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREAAPPG*SETPQQ
Trigger: CTGCTGGGGTGTCTCTGAGCACCCTGGAGGAGCTGC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCGGAGCTTGGTCTCGCTaGTCCCCACGTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPSEASVVVPELRGIPGPGAWSR*SPRGGP
Trigger: GGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCC...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGGAGCTTGGTCTCGCTaGTCCCCACGTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSGAWSR*SPRGGP
Trigger: GGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGACAGGGCCTCGGAGAATaGACACACGAAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGQGLGE*THEGHA
Trigger: GGCGTGGCCTTCGTGTGTGCATTCTCCGAGGCCCTG...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGGGTCTGGGCAGCGATaGGGTGGGCCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPGSGQR*GGPGCW
Trigger: CCAGCAGCCTGGCCCACCGCATCGCTGCCCAGACCC...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGGGTCTGGGCAGCGATaGGGTGGGCCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSGSGQR*GGPGCW
Trigger: CCAGCAGCCTGGCCCACCGCATCGCTGCCCAGACCC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCGGGTCTGGGCAGCGATaGGGTGGGCCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLGSGQR*GGPGCW
Trigger: CCAGCAGCCTGGCCCACCGCATCGCTGCCCAGACCC...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCAGCAGGGTGTTGGCCCTCGTaGAGCAGCATCTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: PHRAGWARPAAPVCLGAAGCWPS*SSILAV
Trigger: GACGGCCAAGATGCTGCTGCACGAGGGCCAACACCC...TGCTGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCATGGTGCCACCCGGGGTaGACACGTCTGAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPWCHPG*TRLSAA
Trigger: AGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCA...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGTGGTGCCACCCGGGGTaGACACGTCTGAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRWCHPG*TRLSAA
Trigger: AGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCA...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGCTCGCAGCCCGCCCTaGTCCAGGGCGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSARSPP*SRAWSP
Trigger: TGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGGCGCTCATGGTGGCTaGTCGCAGCCCGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSGAHGG*SQPALL
Trigger: GAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp ACAGGCCTCCAGCAGATGCTGCAGGAGCTTGGTCTCGCTGCTCCCCACGTGGCGGAGCCACCACCACGGTaGCTTCTGCTCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TGLQQMLQELGLAAPHVAEPPPR*LLLTGE
Trigger: CTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTC...CGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CCACCTCCCGAGCTGAGCTCACCTAGTGCCCAGGGCTTGTCAGAGGTCCCAGGGGCAAGGTGGGCTCACTaGAGCAAGGGGCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PPPELSSPSAQGLSEVPGARWAH*SKGQSH
Trigger: GTGGCTCTGCCCCTTGCTGCAGTGAGCCCACCTTGC...CCCTGGGACCTCTGACAAGCCCTGGGCACTAGGTGAGCTCAGCTCGGGAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGCAAGGTGGGCTCACTaGAGCAAGGGGCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREARWAH*SKGQSH
Trigger: GTGGCTCTGCCCCTTGCTGCAGTGAGCCCACCTTGC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGCGGAAGCCGAGAGCTaGAGCAGTTGGGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRAEAES*SSWGQR
Trigger: ACGCTGGCCCCAACTGCTGCAGCTCTCGGCTTCCGC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGCAGCACCTCCTGGTTaGAGTGCGTGGTCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREAAPPG*SAWSGN
Trigger: GTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp TCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGATGGGCAGCACCTCCTGGTTaGAGTGCGTGGTCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: SWWLLAARPAPGRGVHRWAAPPG*SAWSGN
Trigger: GTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGC...CCATCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp CAGGCAGCTCTGCAGCACCTCCTGGTTGGAGTGCGTGGTCCGGCAACCCAGAGCCTCTGCAGCACCTCCTaGTTGGAGTGCGTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: QAALQHLLVGVRGPATQSLCSTS*LECVVR
Trigger: CCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAG...GCTCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAGCTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGACAGCACCCGTGTGTTTaGGGGCAGCAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGQHPCV*GQQLLQ
Trigger: CTGGAGGAGCTGCTGCCCCCAAACACACGGGTGCTG...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCAGCACAGCACCCGTGTGTTTaGGGGCAGCAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PHRAGWARPAAPVCLGAAQHPCV*GQQLLQ
Trigger: CTGGAGGAGCTGCTGCCCCCAAACACACGGGTGCTG...TGCTGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGCCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLPHRAG*ARPAAP
Trigger: GGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCGCTGCTCCCCACGTaGCGGCCCCGCGCCATCACT +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSSLLPT*RPRAIT
Trigger: AGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGA...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGTCCCCAGCAGGGTCTaGGCAGCGATGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSVPSRV*AAMRWA
Trigger: GGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGAC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGTCCCCAGCAGGGTCTaGGCAGCGATGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPVPSRV*AAMRWA
Trigger: GGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGAC...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGAGCTGGGCTGGGTGTTaGCCCTCGTGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGRESWAGC*PSCSSI
Trigger: GATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCT...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCCCACGGCGCTCATGGTaGCTGCTCGCAGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLPRRSW*LLAARP
Trigger: AGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGG...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCCCACGGCGCTCATGGTaGCTGCTCGCAGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPPRRSW*LLAARP
Trigger: AGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGG...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACCACGGCGCTCATGGTaGCTGCTCGCAGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSPRRSW*LLAARP
Trigger: AGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACCTCCACGGCGCTCATaGTGGCTGCTCGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSPPRRS*WLLAAR
Trigger: GCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCCCTCCACGGCGCTCATaGTGGCTGCTCGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPSEASVVVPELRGIPGPPPRRS*WLLAAR
Trigger: GCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGG...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACCTTGGCCCGGCAGGTaGCAGCCTCCACGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSPWPGR*QPPRRS
Trigger: TGAGCGCCGTGGAGGCTGCCACCTGCCGGGCCAAGG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCACCTCCCGAGCTGAGCTCACCTAGTGCCCAGGGCTTGTCAGAGGTCCCAGGGTCAGGCCAGGGCCCCTaGCTTTACTGCAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PPPELSSPSAQGLSEVPGSGQGP*LYCRGE
Trigger: CTCTCCCCTGCAGTAAAGCCAGGGGCCCTGGCCTGA...CCCTGGGACCTCTGACAAGCCCTGGGCACTAGGTGAGCTCAGCTCGGGAGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGGGTCTGCATGTGTCCTaGCTGGCCAGGGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLGLHVS*LARATL
Trigger: GAGGGTGGCCCTGGCCAGCCAGGACACATGCAGACC...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGAAGGGCAGAAGTCCGTaGCCGCAGAGGCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWKGRSP*PQRQLS
Trigger: GCTCAGCTGCCTCTGCGGCCACGGACTTCTGCCCTT...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CAA 72 bp CCACCTCCCGAGCTGAGCTCACCTAGTGCCCAGGGCTaGTCAGAGGTCCCAGGGGGAGACAGGTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PPPELSSPSAQG*SEVPGGDRCWC
Trigger: GCACCAACACCTGTCTCCCCCTGGGACCTCTGACAAGCCCTGGGCACTAGGTGAGCTCAGCTCGGGAGGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCCACGCCACTGCCACTaGGGCCAGTGTGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRPRHCH*GQCGCR
Trigger: TCGACATCCACACTGGCCTCAGTGGCAGTGGCGTGG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGTGGGCATGCCCATCTTaGCGGCTCCTTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRWACPS*RLLQPG
Trigger: CCCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCA...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCATGGGCATGCCCATCTTaGCGGCTCCTTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPWACPS*RLLQPG
Trigger: CCCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCA...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCGGGGTGCACACGTCTaGGCGCAGCTGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHRGAHV*AQLGWV
Trigger: CACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp TGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGGGGCCGCCTGCACCGACCAAGCAGTCAACTaGGTCAGCCTGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: CRWPSEGLSTFLQGAACTDQAVN*VSLPWE
Trigger: TTCCCAGGGCAGGCTGACTCAGTTGACTGCTTGGTC...GGTGCAGGCGGCCCCCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCACAGCTGCCATCTTGTTaGCTCGGACGCCGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPQLPSC*LGRRCA
Trigger: AGCGCAGCGGCGTCCGAGGCAACAAGATGGCAGCTG...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGCTCTGATGAGGCCCTaGGCGATGGCCCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSALMRP*AMAPAM
Trigger: CATGGCGGGGGCCATCGCGCAGGGCCTCATCAGAGC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGATGGACCTCCTGGTTGGAGTaGGTGGTCCGGCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: SWWLLAARPAPGRGVHRWTSWLE*VVRQPR
Trigger: TCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGT...CCATCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCACAGGAGCCACCTCTaGCAGGACAGCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRHRSHL*QDSWQH
Trigger: GTGCTGCCAGCTGTCCTGGCAGAGGTGGCTCCTGTG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGCACAGGAGCCACCTCTaGCAGGACAGCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLHRSHL*QDSWQH
Trigger: GTGCTGCCAGCTGTCCTGGCAGAGGTGGCTCCTGTG...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAGCAGCTCCTCCAGGGTaGTCAGAGACACCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPAAPPG*SETPQQ
Trigger: CTGCTGGGGTGTCTCTGAGCACCCTGGAGGAGCTGC...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGGAGCTTGGTCTCGCTaGTCCCCACGTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHGAWSR*SPRGGP
Trigger: GGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGGAGCTTGGTCTCGCTaGTCCCCACGTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLGAWSR*SPRGGP
Trigger: GGGGCCGCCACGTGGGGAGCAGCGAGACCAAGCTCC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGCCTCCAGCAGATGCTaGAGGAGCTTGGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREASSRC*RSLVSL
Trigger: CAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCAGGGCCTCGGAGAATaGACACACGAAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRQGLGE*THEGHA
Trigger: GGCGTGGCCTTCGTGTGTGCATTCTCCGAGGCCCTG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CGCGCCATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCAGGGCCTCGGAGAATaGACACACGAAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: RAITMAPSWTTQGRLGKTQGLGE*THEGHA
Trigger: GGCGTGGCCTTCGTGTGTGCATTCTCCGAGGCCCTG...GGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGGGTGTTGGCCCTCGTaGAGCAGCATCTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRGCWPS*SSILAV
Trigger: GACGGCCAAGATGCTGCTGCACGAGGGCCAACACCC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGGGGTGTTGGCCCTCGTaGAGCAGCATCTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLGCWPS*SSILAV
Trigger: GACGGCCAAGATGCTGCTGCACGAGGGCCAACACCC...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGCTCGCAGCCCGCCCTaGTCCAGGGCGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHARSPP*SRAWSP
Trigger: TGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGCTCGCAGCCCGCCCTaGTCCAGGGCGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRARSPP*SRAWSP
Trigger: TGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGGCGCTCATGGTGGCTaGTCGCAGCCCGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHGAHGG*SQPALL
Trigger: GAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGAAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGSRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGRESRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGATGAGGGATGGAGCGTaGTGCTGTCCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREMRDGA*CCPAGA
Trigger: GGCACCTGCAGGACAGCAGCACGCTCCATCCCTCAT...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTGCTGTCCTGCTGACCCTGACAAGTaGCAGGGCCAGGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: SPWPQRQLSMRDGACCCPADPDK*QGQAWT
Trigger: GGTCCAAGCCTGGCCCTGGCACTTGTCAGGGTCAGC...AGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGAACCCTGAAGTATGGCTaGTCTGATGAGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RSWWLLAARPAPGRGVHRTLKYG*SDEALR
Trigger: GCGCAGGGCCTCATCAGAGCAGCCATACTTCAGGGT...TCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCTCTGCTGTCCACAGTaGCAGCACCCCCTTCGGCTG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRLCCPQ*QHPLRL
Trigger: CAGCCGAAGGGGGTGCTGGCACTGTGGACAGCAGAG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGCCTGGTTGGAGTGCGTaGTCCGGCAACCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREPGWSA*SGNPEL
Trigger: AAGCTCTGGGTTGCCGGACCACGCACTCCAACCAGG...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGCAGCACCTCCTGGTTaGAGTGCGTGGTCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRAAPPG*SAWSGN
Trigger: GTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCAGCAGCACCTCCTGGTTaGAGTGCGTGGTCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPAAPPG*SAWSGN
Trigger: GTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGC...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCTCTGCAGCACCTCCTaGTTGGAGTGCGTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRLCSTS*LECVVR
Trigger: CCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CAGGCCCTCACCAGCTGGGCCAGGAGTGGCTGGCTTGGGATCTCCACCTCCCGACTCTGCCAGGACAGCTaGCAGCACATGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QALTSWARSGWLGISTSRLCQDS*QHMRLG
Trigger: ACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAG...TCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCAGCACCCGTGTGTTTaGGGGCAGCAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRQHPCV*GQQLLQ
Trigger: CTGGAGGAGCTGCTGCCCCCAAACACACGGGTGCTG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCTCGCTGCTCCCCACGTaGCGGCCCCGCGCCATCACT +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARASLLPT*RPRAIT
Trigger: AGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGA...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATTCGCTGCTCCCCACGTaGCGGCCCCGCGCCATCACT +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHSLLPT*RPRAIT
Trigger: AGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGA...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGAGATGCTGCAGGAGCTTaGTCTCGCTGCTCCCCACGT +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGDAAGA*SRCSPR
Trigger: ACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATC...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGGGCAGCGATGCGGTaGGCCAGGCTGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSWAAMR*ARLLGM
Trigger: CATGCCCAGCAGCCTGGCCCACCGCATCGCTGCCCA...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCTGGGCAGCGATGCGGTaGGCCAGGCTGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLWAAMR*ARLLGM
Trigger: CATGCCCAGCAGCCTGGCCCACCGCATCGCTGCCCA...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGTCCCCAGCAGGGTCTaGGCAGCGATGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRVPSRV*AAMRWA
Trigger: GGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGAC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGAGCTGGGCTGGGTGTTaGCCCTCGTGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRSWAGC*PSCSSI
Trigger: GATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCT...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CAGGCAGCTCTGCAGCACCTCCTGGTTGGAGTGCGTGGTCCGGCAACCCAGAGCGGAGTCCATAGATGGTaGTGCCACCCGGGGTGCACA +
Preference number: 4 (lower is better)
Translates to: QAALQHLLVGVRGPATQSGVHRW*CHPGCT
Trigger: TGTGCACCCCGGGTGGCACCACCATCTATGGACTCC...GCTCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAGCTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCGTGGAGTCCATAGATaGTGGTGCCACCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRRGVHR*WCHPGC
Trigger: GCACCCCGGGTGGCACCACCATCTATGGACTCCACG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCACGTGGAGTCCATAGATaGTGGTGCCACCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPRGVHR*WCHPGC
Trigger: GCACCCCGGGTGGCACCACCATCTATGGACTCCACG...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCCACGGCGCTCATGGTaGCTGCTCGCAGCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHPRRSW*LLAARP
Trigger: AGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCCTCCACGGCGCTCATaGTGGCTGCTCGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHPPRRS*WLLAAR
Trigger: GCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGGCTCCCCCGCCTGCTaGAACCTCCCAAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSGSPAC*NLPSPA
Trigger: GGCAGGACTTGGGAGGTTCCAGCAGGCGGGGGAGCC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAACCTCCAGAGGCTGTTaGGCGGAAGCCGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPTSRGC*AEAESC
Trigger: GCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGT...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCAACCTCCAGAGGCTGTTaGGCGGAAGCCGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPTSRGC*AEAESC
Trigger: GCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGT...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGAAGGGCAGAAGTCCGTaGCCGCAGAGGCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLKGRSP*PQRQLS
Trigger: GCTCAGCTGCCTCTGCGGCCACGGACTTCTGCCCTT...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CAA 72 bp ATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTaGGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ITMAPSWTTQGR*GKTRSTRVFGG
Trigger: GCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR TCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGAGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGAWWQR*RAGSSA
Trigger: TGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGC...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGCGGGGTGCACACGTCTaGGCGCAGCTGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWRGAHV*AQLGWV
Trigger: CACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCG...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGGGTTTGCTTCTCCCCTaGGTCCTGGCTTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWGLLLP*VLAFLT
Trigger: GGTCAGGAAAGCCAGGACTCAGGGGAGAAGCAAACC...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGGACCAAGCAGTCAACTaGGTCAGCCTGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWDQAVN*VSLPWE
Trigger: TTCCCAGGGCAGGCTGACTCAGTTGACTGCTTGGTC...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAAGCACCCCCTTCGGCTaGCACCTGTGCTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPSTPFG*HLCLTK
Trigger: CTTGGTCAAGCACAGGTGTCAGCCGAAGGGGGTGCT...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR TCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACTCCACCTCCCGAGCTaGGCTCACCTAGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSLHLPS*AHLVPR
Trigger: CCTGGGCACTAGGTGAGCTCAGCTCGGGAGGTGGAG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGCTCTGATGAGGCCCTaGGCGATGGCCCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLALMRP*AMAPAM
Trigger: CATGGCGGGGGCCATCGCGCAGGGCCTCATCAGAGC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGCTCTGATGAGGCCCTaGGCGATGGCCCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRALMRP*AMAPAM
Trigger: CATGGCGGGGGCCATCGCGCAGGGCCTCATCAGAGC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGGGGCCGCCTGCACCAGCTTCCACTTTTCCTaGTCTGATGAGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: CRWPSEGLSTFLQGAACTSFHFS*SDEALR
Trigger: GCGCAGGGCCTCATCAGAGCAGGAAAAGTGGAAGCT...GGTGCAGGCGGCCCCCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGACCTCCTGGTTGGAGTaGGTGGTCCGGCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRTSWLE*VVRQPR
Trigger: TCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGT...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAACCTCCTGGTTGGAGTaGGTGGTCCGGCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPTSWLE*VVRQPR
Trigger: TCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGT...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGCCTCCAGCAGATGCTaGAGGAGCTTGGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRASSRC*RSLVSL
Trigger: CAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGGCCTCCAGCAGATGCTaGAGGAGCTTGGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLASSRC*RSLVSL
Trigger: CAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGC...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CGCGCCATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCGCCTCCAGCAGATGCTaGAGGAGCTTGGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: RAITMAPSWTTQGRLGKTASSRC*RSLVSL
Trigger: CAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGC...GGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCGGGTCTGGGCAGCGATaGGGTGGGCCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LFMASTNCPTMRANDQDAGSGQR*GGPGCW
Trigger: CCAGCAGCCTGGCCCACCGCATCGCTGCCCAGACCC...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAGGGTGTTGGCCCTCGTaGAGCAGCATCTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQGCWPS*SSILAV
Trigger: GACGGCCAAGATGCTGCTGCACGAGGGCCAACACCC...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGGTGCCACCCGGGGTaGACACGTCTGAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSWCHPG*TRLSAA
Trigger: AGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCA...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CGCGCCATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCGTCCATAGATGGTGGTaGCACCCGGGGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: RAITMAPSWTTQGRLGKTVHRWW*HPGCTR
Trigger: ACGTGTGCACCCCGGGTGGCACCACCATCTATGGAC...GGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGTCCATAGATGGTGGTaGCACCCGGGGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRVHRWW*HPGCTR
Trigger: ACGTGTGCACCCCGGGTGGCACCACCATCTATGGAC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCAGTCCATAGATGGTGGTaGCACCCGGGGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPVHRWW*HPGCTR
Trigger: ACGTGTGCACCCCGGGTGGCACCACCATCTATGGAC...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGCTCGCAGCCCGCCCTaGTCCAGGGCGTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTARSPP*SRAWSP
Trigger: TGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGC...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGGCGCTCATGGTGGCTaGTCGCAGCCCGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWGAHGG*SQPALL
Trigger: GAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCC...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCGGCGCTCATGGTGGCTaGTCGCAGCCCGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGGAHGG*SQPALL
Trigger: GAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCC...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRSRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CGCGCCATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: RAITMAPSWTTQGRLGKTSRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...GGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCCAAGTCCTGCCCCCTaGATTTCCCTGTGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRPSPAP*ISLCKG
Trigger: CCCCTTGCACAGGGAAATGCAGGGGGCAGGACTTGG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAACACCACGGTGCCTTCTaGTCACTGGGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQHHGAF*SLGREE
Trigger: CTCCTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTG...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGGGCGTGGAGTCCATAGACCAACTGCCCAACCATaGGGGCAAATGACCAAGACG +
Preference number: 4 (lower is better)
Translates to: RSWWLLAARPAPGRGVHRPTAQP*GQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG...TCTATGGACTCCACGCCCTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGTGCCACCCCAGCACTaGCGCAGACCTGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLVPPQH*RRPGPA
Trigger: TGCTGGGCCAGGTCTGCGGCAGTGCTGGGGTGGCAC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCCACCCCACCTACCACTaGCCACCTGGTGCCACCCCA +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPHPTYH*PPGATP
Trigger: TGGGGTGGCACCAGGTGGGCAGTGGTAGGTGGGGTG...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGAGGCCAGTGTGGTGGTaGCAGAGCTACGGGGTATTC +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGRERPVWW*QSYGVF
Trigger: GAATACCCCGTAGCTCTGGCACCACCACACTGGCCT...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCAAGGGATGGAGCGTGCTaGTGTCCTGCAGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPRDGAC*CPAGAV
Trigger: AACGGCACCTGCAGGACAGCAGCACGCTCCATCCCT...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCTTCCTCCTCCAGGGTaGTCAGAGACACCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRLPPPG*SETPQQ
Trigger: CTGCTGGGGTGTCTCTGAGCACCCTGGAGGAGGAAG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433751.5
ENST00000631620.1
CDS-3UTR GCA 90 bp CCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCAGCAACCCTGAAGTATGGCTaGTCTGATGAGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: PHRAGWARPAAPVCLGAATLKYG*SDEALR
Trigger: GCGCAGGGCCTCATCAGAGCAGCCATACTTCAGGGT...TGCTGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCCTGGTTGGAGTGCGTaGTCCGGCAACCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRPGWSA*SGNPEL
Trigger: AAGCTCTGGGTTGCCGGACCACGCACTCCAACCAGG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp GACACCCCAGCAGCCACGGACACCAAGATGTGTTCAGTGGTGACCACAGGAGCCCCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: DTPAATDTKMCSVVTTGAPHRAG*ARPAAP
Trigger: GGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG...GGCTCCTGTGGTCACCACTGAACACATCTTGGTGTCCGTGGCTGCTGGGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAACCCGCGCCATCACTATaGCCCCTTCCTGGACCACAC +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQPAPSL*PLPGPH
Trigger: GTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGG...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ATGAGGCTTGGTGGCAAAGATGACGAGCAGGCAGCTCTGCAGCACCTCCTGGTTTCGCTGCTCCCCACGTaGCGGCCCCGCGCCATCACT +
Preference number: 4 (lower is better)
Translates to: MRLGGKDDEQAALQHLLVSLLPT*RPRAIT
Trigger: AGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGA...AACCAGGAGGTGCTGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGCCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGATGCTGCAGGAGCTTaGTCTCGCTGCTCCCCACGT +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRDAAGA*SRCSPR
Trigger: ACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATTGGGCAGCGATGCGGTaGGCCAGGCTGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHWAAMR*ARLLGM
Trigger: CATGCCCAGCAGCCTGGCCCACCGCATCGCTGCCCA...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGTGGGCAGCGATGCGGTaGGCCAGGCTGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQWAAMR*ARLLGM
Trigger: CATGCCCAGCAGCCTGGCCCACCGCATCGCTGCCCA...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGATGGGCAGCGATGCGGTaGGCCAGGCTGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRWAAMR*ARLLGM
Trigger: CATGCCCAGCAGCCTGGCCCACCGCATCGCTGCCCA...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGTCCCCAGCAGGGTCTaGGCAGCGATGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTVPSRV*AAMRWA
Trigger: GGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGAC...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCGTCCCCAGCAGGGTCTaGGCAGCGATGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGVPSRV*AAMRWA
Trigger: GGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGAC...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAACGTCTGAGCGCAGCTaGGCTGGGTGTTGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSTSERS*AGCWPS
Trigger: CGAGGGCCAACACCCAGCCCAGCTGCGCTCAGACGT...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGGAGTCCATAGATGGTaGTGCCACCCGGGGTGCACA +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRGVHRW*CHPGCT
Trigger: TGTGCACCCCGGGTGGCACCACCATCTATGGACTCC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGACCTCCACGGCGCTCATaGTGGCTGCTCGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: VPLALFCTGGLICSGAQGPPRRS*WLLAAR
Trigger: GCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGG...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCCTTGGCCCGGCAGGTaGCAGCCTCCACGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGPWPGR*QPPRRS
Trigger: TGAGCGCCGTGGAGGCTGCCACCTGCCGGGCCAAGG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGGCTCCCCCGCCTGCTaGAACCTCCCAAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHGSPAC*NLPSPA
Trigger: GGCAGGACTTGGGAGGTTCCAGCAGGCGGGGGAGCC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGGCTCCCCCGCCTGCTaGAACCTCCCAAGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLGSPAC*NLPSPA
Trigger: GGCAGGACTTGGGAGGTTCCAGCAGGCGGGGGAGCC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCAGGGCCCAGAGCCACCTaGCCACTTGTCAGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPGPRAT*PLVRSL
Trigger: TAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCC...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATCCGTTAGGGACAGGTaGAGGGGCCAAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGSVRDR*RGQVLP
Trigger: TGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGA...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGAGCTTCCACTTTTCTaGGACGGCACACTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRELPLF*DGTLRP
Trigger: CGGCCGGAGTGTGCCGTCCCAGAAAAGTGGAAGCTC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS-3UTR CCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGTGGTGTGAATGCAGGTaGCCGTCAGAAGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWWCECR*PSEGLS
Trigger: GGACAGCCCTTCTGACGGCCACCTGCATTCACACCA...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRAWWQR*RAGSSA
Trigger: TGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGAAGATGTGTTCAGTGGTaGCCACAGGAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGRCVQW*PQEPPL
Trigger: CAGAGGTGGCTCCTGTGGTCACCACTGAACACATCT...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACCACGCCACTGCCACTaGGGCCAGTGTGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSPRHCH*GQCGCR
Trigger: TCGACATCCACACTGGCCTCAGTGGCAGTGGCGTGG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGGGCATGCCCATCTTaGCGGCTCCTTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSWACPS*RLLQPG
Trigger: CCCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCA...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCGGGGTGCACACGTCTaGGCGCAGCTGGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWRGAHV*AQLGWV
Trigger: CACCCAGCCCAGCTGCGCTCAGACGTGTGCACCCCG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACCCCTAGAGCTGAGATaGGGCAGCCGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRPLELR*GSRPGC
Trigger: ACAGCCAGGCCGGCTGCCTCATCTCAGCTCTAGGGG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCCTCCTTAGCAGGGGATaGGCACGCCCACCACAGCCA +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPLLSRG*ARPPQP
Trigger: TGGCTGTGGTGGGCGTGCTCATCCCCTGCTAAGGAG...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCGCCCAGCCTCGCTaGGGGCATGCTCCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDAAQPR*GHAPAS
Trigger: TGAGGCGGGAGCATGCCCTCAGCGAGGCTGGGCGGC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCACAGATGGGCTTGGTGTaGATGCAGGTGGCCGTCAGA +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPQMGLV*MQVAVR
Trigger: TCTGACGGCCACCTGCATTCACACCAAGCCCATCTG...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGTGCCGTGCCGAGAACTaGGCCCGTGTCTTTGTCACA +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRCRAEN*ARVFVT
Trigger: TGTGACAAAGACACGGGCTCAGTTCTCGGCACGGCA...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp GGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGCAGCTGCCATCTTGTTaGCTCGGACGCCGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GLGVNAGGRQKGCPPSFRQLPSC*LGRRCA
Trigger: AGCGCAGCGGCGTCCGAGGCAACAAGATGGCAGCTG...CCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp ATGAGGCTTGGTGGCAAAGATGACGAGCAGGCAGCTCTGCAGCACCTCCTGGTTGCTCTGATGAGGCCCTaGGCGATGGCCCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: MRLGGKDDEQAALQHLLVALMRP*AMAPAM
Trigger: CATGGCGGGGGCCATCGCGCAGGGCCTCATCAGAGC...AACCAGGAGGTGCTGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGAAGCTTCCACTTTTCCTaGTCTGATGAGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGSFHFS*SDEALR
Trigger: GCGCAGGGCCTCATCAGAGCAGGAAAAGTGGAAGCT...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACACAGGAGCCACCTCTaGCAGGACAGCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSHRSHL*QDSWQH
Trigger: GTGCTGCCAGCTGTCCTGGCAGAGGTGGCTCCTGTG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGCAGCTCCTCCAGGGTaGTCAGAGACACCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSAAPPG*SETPQQ
Trigger: CTGCTGGGGTGTCTCTGAGCACCCTGGAGGAGCTGC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCGCAGCTCCTCCAGGGTaGTCAGAGACACCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLAAPPG*SETPQQ
Trigger: CTGCTGGGGTGTCTCTGAGCACCCTGGAGGAGCTGC...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAGCCTCCAGCAGATGCTaGAGGAGCTTGGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQASSRC*RSLVSL
Trigger: CAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGC...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCCAGGGCCTCGGAGAATaGACACACGAAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPQGLGE*THEGHA
Trigger: GGCGTGGCCTTCGTGTGTGCATTCTCCGAGGCCCTG...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GACACCCCAGCAGCCACGGACACCAAGATGTGTTCAGTGGTGACCACAGGAGCCGGGTGTTGGCCCTCGTaGAGCAGCATCTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: DTPAATDTKMCSVVTTGAGCWPS*SSILAV
Trigger: GACGGCCAAGATGCTGCTGCACGAGGGCCAACACCC...GGCTCCTGTGGTCACCACTGAACACATCTTGGTGTCCGTGGCTGCTGGGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATTGGTGCCACCCGGGGTaGACACGTCTGAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHWCHPG*TRLSAA
Trigger: AGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCA...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGATGGTGCCACCCGGGGTaGACACGTCTGAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRWCHPG*TRLSAA
Trigger: AGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCA...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp GGCTCACCACAACGCTCCCTGCCGTGCCGAGAACTGAGCCCGTGTCTTTGTCACGTCCATAGATGGTGGTaGCACCCGGGGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: GSPQRSLPCRELSPCLCHVHRWW*HPGCTR
Trigger: ACGTGTGCACCCCGGGTGGCACCACCATCTATGGAC...GTGACAAAGACACGGGCTCAGTTCTCGGCACGGCAGGGAGCGTTGTGGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAACCAAGTCCTGCCCCCTaGATTTCCCTGTGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQPSPAP*ISLCKG
Trigger: CCCCTTGCACAGGGAAATGCAGGGGGCAGGACTTGG...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPEPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGREPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp GACACCCCAGCAGCCACGGACACCAAGATGTGTTCAGTGGTGACCACAGGAGCCGCAAGGTGGGCTCACTaGAGCAAGGGGCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: DTPAATDTKMCSVVTTGAARWAH*SKGQSH
Trigger: GTGGCTCTGCCCCTTGCTGCAGTGAGCCCACCTTGC...GGCTCCTGTGGTCACCACTGAACACATCTTGGTGTCCGTGGCTGCTGGGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CAGGCCCTCACCAGCTGGGCCAGGAGTGGCTGGCTTGGGATCTCCACCTCCCGAATGGCCTCAACCAACTaGCCAACCATGCGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: QALTSWARSGWLGISTSRMASTN*PTMRAN
Trigger: ATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCAT...TCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCACCCCACCTACCACTaGCCACCTGGTGCCACCCCA +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHHPTYH*PPGATP
Trigger: TGGGGTGGCACCAGGTGGGCAGTGGTAGGTGGGGTG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCACCCCACCTACCACTaGCCACCTGGTGCCACCCCA +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPHPTYH*PPGATP
Trigger: TGGGGTGGCACCAGGTGGGCAGTGGTAGGTGGGGTG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCTAAAGCCAGGGGTCTaGATGTGTCCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRLKPGV*MCPGWP
Trigger: TGGCCAGCCAGGACACATGCAGACCCCTGGCTTTAG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAGGAGGGGCCAAGTCTTaGCATCAGAGGCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQGGAKS*HQRPVW
Trigger: CCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCC...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCGCCTCGCTGAGGGCATaGTCCCGCCTCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAASLRA*SRLTSR
Trigger: TCTGGAGGTGAGGCGGGAGCATGCCCTCAGCGAGGC...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACAGCACCCGTGTGTTTaGGGGCAGCAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSQHPCV*GQQLLQ
Trigger: CTGGAGGAGCTGCTGCCCCCAAACACACGGGTGCTG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHPHRAG*ARPAAP
Trigger: GGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLPHRAG*ARPAAP
Trigger: GGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCCCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAPHRAG*ARPAAP
Trigger: GGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGACTATGGCCCCTTCCTaGACCACACAGGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRTMAPS*TTQGRL
Trigger: CAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGT...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCAACTATGGCCCCTTCCTaGACCACACAGGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPTMAPS*TTQGRL
Trigger: CAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGT...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACCCGCGCCATCACTATaGCCCCTTCCTGGACCACAC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSPAPSL*PLPGPH
Trigger: GTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp GGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGCCCGCGCCATCACTATaGCCCCTTCCTGGACCACAC +
Preference number: 4 (lower is better)
Translates to: GLGVNAGGRQKGCPPSFRPAPSL*PLPGPH
Trigger: GTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGG...CCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCCCCGCGCCATCACTATaGCCCCTTCCTGGACCACAC +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPPAPSL*PLPGPH
Trigger: GTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGG...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAATCGCTGCTCCCCACGTaGCGGCCCCGCGCCATCACT +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQSLLPT*RPRAIT
Trigger: AGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGA...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGTCGCTGCTCCCCACGTaGCGGCCCCGCGCCATCACT +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWSLLPT*RPRAIT
Trigger: AGTGATGGCGCGGGGCCGCCACGTGGGGAGCAGCGA...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp ATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCGATGCTGCAGGAGCTTaGTCTCGCTGCTCCCCACGT +
Preference number: 4 (lower is better)
Translates to: ITMAPSWTTQGRLGKTRSDAAGA*SRCSPR
Trigger: ACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATC...GCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAAGCTGGGCTGGGTGTTaGCCCTCGTGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSSWAGC*PSCSSI
Trigger: GATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCT...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGCTGGGCTGGGTGTTaGCCCTCGTGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLSWAGC*PSCSSI
Trigger: GATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCT...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATACGTCTGAGCGCAGCTaGGCTGGGTGTTGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHTSERS*AGCWPS
Trigger: CGAGGGCCAACACCCAGCCCAGCTGCGCTCAGACGT...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACGTCTGAGCGCAGCTaGGCTGGGTGTTGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLTSERS*AGCWPS
Trigger: CGAGGGCCAACACCCAGCCCAGCTGCGCTCAGACGT...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp GCAGATGGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCCGTGGAGTCCATAGATaGTGGTGCCACCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: ADGLGVNAGGRQKGCPPSRGVHR*WCHPGC
Trigger: GCACCCCGGGTGGCACCACCATCTATGGACTCCACG...GGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACCTCCACGGCGCTCATaGTGGCTGCTCGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAPPRRS*WLLAAR
Trigger: GCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCCTCCACGGCGCTCATaGTGGCTGCTCGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWPPRRS*WLLAAR
Trigger: GCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCCTTGGCCCGGCAGGTaGCAGCCTCCACGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWPWPGR*QPPRRS
Trigger: TGAGCGCCGTGGAGGCTGCCACCTGCCGGGCCAAGG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCTTGGCCCGGCAGGTaGCAGCCTCCACGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQPWPGR*QPPRRS
Trigger: TGAGCGCCGTGGAGGCTGCCACCTGCCGGGCCAAGG...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACCTTGGCCCGGCAGGTaGCAGCCTCCACGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAPWPGR*QPPRRS
Trigger: TGAGCGCCGTGGAGGCTGCCACCTGCCGGGCCAAGG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGAGAGGCAGGAAAGGATaGCCAGAGCCCAGCCTACTT +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGRERGRKG*PEPSLL
Trigger: AAGTAGGCTGGGCTCTGGCCATCCTTTCCTGCCTCT...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWNVAAR*AHCSKG
Trigger: CCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATT...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp AGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTGCTGTCCTTGTGCAGACCCCATATaGCTCGTGCCCCCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: SPWPQRQLSMRDGACCCPCADPI*LVPPRA
Trigger: AGCTCTAGGGGGCACGAGCCATATGGGGTCTGCACA...AGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCTCAGGCCAGGGCCCCTaGCTTTACTGCAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPSGQGP*LYCRGE
Trigger: CTCTCCCCTGCAGTAAAGCCAGGGGCCCTGGCCTGA...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAACAGAGGCCAGTGTGGTaGTGCCAGAGCTACGGGGTA +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQQRPVW*CQSYGV
Trigger: TACCCCGTAGCTCTGGCACCACCACACTGGCCTCTG...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCGAGAGCTGCAGCAGTTaGGGCCAGCGTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLESCSS*GQRGTG
Trigger: TCCAGTCCCACGCTGGCCCCAACTGCTGCAGCTCTC...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCGAGAGCTGCAGCAGTTaGGGCCAGCGTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: LPSEASVVVPELRGIPGPESCSS*GQRGTG
Trigger: TCCAGTCCCACGCTGGCCCCAACTGCTGCAGCTCTC...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCACCTCCAGAGGCTGTTaGGCGGAAGCCGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLTSRGC*AEAESC
Trigger: GCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGT...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
3UTR CAA 72 bp CTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAGTCTaGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LPSVRDRWRGQV*PSEASVVVPEL
Trigger: TAGCTCTGGCACCACCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGACGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGACTGGCCAGTATGTGCTaGGCTTCCACTTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGLASMC*ASTFPA
Trigger: AGCAGGAAAAGTGGAAGCTCAGCACATACTGGCCAG...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGACAGCTGGCAGCACATaGGGCTTGGTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRTAGST*GLVAKM
Trigger: CATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGT...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGAGATGTGTTCAGTGGTaGCCACAGGAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRRCVQW*PQEPPL
Trigger: CAGAGGTGGCTCCTGTGGTCACCACTGAACACATCT...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp AGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTGCTGTCCTAGATGTGTTCAGTGGTaGCCACAGGAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: SPWPQRQLSMRDGACCCPRCVQW*PQEPPL
Trigger: CAGAGGTGGCTCCTGTGGTCACCACTGAACACATCT...AGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCCACGCCACTGCCACTaGGGCCAGTGTGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHPRHCH*GQCGCR
Trigger: TCGACATCCACACTGGCCTCAGTGGCAGTGGCGTGG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGAACCATGCGGGCAAATaGCCAAGACGCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWNHAGK*PRRHLL
Trigger: CAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTT...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACTCCTTAGCAGGGGATaGGCACGCCCACCACAGCCA +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRLLSRG*ARPPQP
Trigger: TGGCTGTGGTGGGCGTGCTCATCCCCTGCTAAGGAG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGGTATTCCAGGACCCCTaGCCTAGGCACGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQVFQDP*PRHGAG
Trigger: TCCTGCCCCGTGCCTAGGTCAGGGGTCCTGGAATAC...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCATTTGCACTGGTGGATTaGTCTGCTCAGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPFALVD*SAQAHR
Trigger: CCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAA...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCAGCTGCCATCTTGTTaGCTCGGACGCCGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLQLPSC*LGRRCA
Trigger: AGCGCAGCGGCGTCCGAGGCAACAAGATGGCAGCTG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAGCTCTGATGAGGCCCTaGGCGATGGCCCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQALMRP*AMAPAM
Trigger: CATGGCGGGGGCCATCGCGCAGGGCCTCATCAGAGC...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCTCTGATGAGGCCCTaGGCGATGGCCCCCGCCATG +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAALMRP*AMAPAM
Trigger: CATGGCGGGGGCCATCGCGCAGGGCCTCATCAGAGC...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAAGCTTCCACTTTTCCTaGTCTGATGAGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPSFHFS*SDEALR
Trigger: GCGCAGGGCCTCATCAGAGCAGGAAAAGTGGAAGCT...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGTTCCTGTCTGTTGGTaGACTGGCCAGTATGTGCTG +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREVPVCW*TGQYVL
Trigger: CAGCACATACTGGCCAGTGCACCAACAGACAGGAAC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ACAGGCCTCCAGCAGATGCTGCAGGAGCTTGGTCTCGCTGCTCCCCACGTGGCGGTTCCTGTCTGTTGGTaGACTGGCCAGTATGTGCTG +
Preference number: 4 (lower is better)
Translates to: TGLQQMLQELGLAAPHVAVPVCW*TGQYVL
Trigger: CAGCACATACTGGCCAGTGCACCAACAGACAGGAAC...CGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCACAGGAGCCACCTCTaGCAGGACAGCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHHRSHL*QDSWQH
Trigger: GTGCTGCCAGCTGTCCTGGCAGAGGTGGCTCCTGTG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCACAGGAGCCACCTCTaGCAGGACAGCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLHRSHL*QDSWQH
Trigger: GTGCTGCCAGCTGTCCTGGCAGAGGTGGCTCCTGTG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGCAGCTCCTCCAGGGTaGTCAGAGACACCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHAAPPG*SETPQQ
Trigger: CTGCTGGGGTGTCTCTGAGCACCCTGGAGGAGCTGC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGCCTCCAGCAGATGCTaGAGGAGCTTGGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSASSRC*RSLVSL
Trigger: CAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp GCAGATGGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCGCCTCCAGCAGATGCTaGAGGAGCTTGGTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: ADGLGVNAGGRQKGCPPSASSRC*RSLVSL
Trigger: CAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGC...GGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACAGGCCTCCAGCAGATaGTGCAGGAGCTTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSQASSR*CRSLVS
Trigger: CGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCAGGGCCTCGGAGAATaGACACACGAAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHQGLGE*THEGHA
Trigger: GGCGTGGCCTTCGTGTGTGCATTCTCCGAGGCCCTG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGGGTGTTGGCCCTCGTaGAGCAGCATCTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHGCWPS*SSILAV
Trigger: GACGGCCAAGATGCTGCTGCACGAGGGCCAACACCC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGTGGTGCCACCCGGGGTaGACACGTCTGAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWWCHPG*TRLSAA
Trigger: AGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCA...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCTGGTGCCACCCGGGGTaGACACGTCTGAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGWCHPG*TRLSAA
Trigger: AGCTGCGCTCAGACGTGTGCACCCCGGGTGGCACCA...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGTCCATAGATGGTGGTaGCACCCGGGGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSVHRWW*HPGCTR
Trigger: ACGTGTGCACCCCGGGTGGCACCACCATCTATGGAC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACCAAGTCCTGCCCCCTaGATTTCCCTGTGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSPSPAP*ISLCKG
Trigger: CCCCTTGCACAGGGAAATGCAGGGGGCAGGACTTGG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp GACACCCCAGCAGCCACGGACACCAAGATGTGTTCAGTGGTGACCACAGGAGCCCCAAGTCCTGCCCCCTaGATTTCCCTGTGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: DTPAATDTKMCSVVTTGAPSPAP*ISLCKG
Trigger: CCCCTTGCACAGGGAAATGCAGGGGGCAGGACTTGG...GGCTCCTGTGGTCACCACTGAACACATCTTGGTGTCCGTGGCTGCTGGGGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQEPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGAGCCACCACCACGGTaGCTTCTGCTCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLEPPPR*LLLTGE
Trigger: CTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCGCAAGGTGGGCTCACTaGAGCAAGGGGCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPARWAH*SKGQSH
Trigger: GTGGCTCTGCCCCTTGCTGCAGTGAGCCCACCTTGC...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCCAACTGCCCAACCATaGGGGCAAATGACCAAGACG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRPTAQP*GQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGATGGCCTCAACCAACTaGCCAACCATGCGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWMASTN*PTMRAN
Trigger: ATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCAT...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGCGGCCTGGCTGTAGCTaGACGGAGCCACCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQRPGCS*TEPPGK
Trigger: CTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCG...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCGGCCTGGCTGTAGCTaGACGGAGCCACCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHRPGCS*TEPPGK
Trigger: CTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGGCCCAGCAGCTCCTaGTCCTTAGCAGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSWPSSS*SLAGDE
Trigger: CTCATCCCCTGCTAAGGAGCAGGAGCTGCTGGGCCA...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCTGGCCCAGCAGCTCCTaGTCCTTAGCAGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLWPSSS*SLAGDE
Trigger: CTCATCCCCTGCTAAGGAGCAGGAGCTGCTGGGCCA...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGTGCCACCCCAGCACTaGCGCAGACCTGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAVPPQH*RRPGPA
Trigger: TGCTGGGCCAGGTCTGCGGCAGTGCTGGGGTGGCAC...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCACTGCCCACCTGGTaGCACCCCAGCACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQPLPTW*HPSTAA
Trigger: TGCGGCAGTGCTGGGGTGGCACCAGGTGGGCAGTGG...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACCACTGCCCACCTGGTaGCACCCCAGCACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAPLPTW*HPSTAA
Trigger: TGCGGCAGTGCTGGGGTGGCACCAGGTGGGCAGTGG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCCACTGCCCACCTGGTaGCACCCCAGCACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWPLPTW*HPSTAA
Trigger: TGCGGCAGTGCTGGGGTGGCACCAGGTGGGCAGTGG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCGCCTCGCTGAGGGCATaGTCCCGCCTCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LFMASTNCPTMRANDQDAASLRA*SRLTSR
Trigger: TCTGGAGGTGAGGCGGGAGCATGCCCTCAGCGAGGC...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGACTGGTGGATTGATCTaGTCAGGCGCACAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: CSKGQSHHHGAFCSLGRETGGLI*SGAQGD
Trigger: ATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGT...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCATGAGGGATGGAGCGTaGTGCTGTCCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LPSEASVVVPELRGIPGPMRDGA*CCPAGA
Trigger: GGCACCTGCAGGACAGCAGCACGCTCCATCCCTCAT...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCGCTGACCCTGACAAGTaGCAGGGCCAGGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAADPDK*QGQAWT
Trigger: GGTCCAAGCCTGGCCCTGGCACTTGTCAGGGTCAGC...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAAACCCCGCCTCTCGCTaGTTATTGGCCCGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSNPASR*LLARKG
Trigger: GCCCTTTCGGGCCAATAAGCAGCGAGAGGCGGGGTT...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACTTCCTCCTCCAGGGTaGTCAGAGACACCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSLPPPG*SETPQQ
Trigger: CTGCTGGGGTGTCTCTGAGCACCCTGGAGGAGGAAG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433751.5
ENST00000631620.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCAACGCTCCCTGCCGTaGCGAGAACTGAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHQRSLP*RELSPC
Trigger: ACACGGGCTCAGTTCTCGGCACGGCAGGGAGCGTTG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCCCTGGTTGGAGTGCGTaGTCCGGCAACCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLPGWSA*SGNPEL
Trigger: AAGCTCTGGGTTGCCGGACCACGCACTCCAACCAGG...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGCAGCACCTCCTGGTTaGAGTGCGTGGTCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHAAPPG*SAWSGN
Trigger: GTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCTCTGCAGCACCTCCTaGTTGGAGTGCGTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHLCSTS*LECVVR
Trigger: CCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCTCTGCAGCACCTCCTaGTTGGAGTGCGTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLLCSTS*LECVVR
Trigger: CCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCTGCAGCACCTCCTaGTTGGAGTGCGTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPLCSTS*LECVVR
Trigger: CCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAACTCTGCCAGGACAGCTaGCAGCACATGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQLCQDS*QHMRLG
Trigger: ACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAG...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCAGCACCCGTGTGTTTaGGGGCAGCAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLQHPCV*GQQLLQ
Trigger: CTGGAGGAGCTGCTGCCCCCAAACACACGGGTGCTG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACACCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTPHRAG*ARPAAP
Trigger: GGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCACTATGGCCCCTTCCTaGACCACACAGGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: ITMAPSWTTQGRLGKTRSTMAPS*TTQGRL
Trigger: CAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGT...GCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCCCGCGCCATCACTATaGCCCCTTCCTGGACCACAC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHPAPSL*PLPGPH
Trigger: GTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGATGCTGCAGGAGCTTaGTCTCGCTGCTCCCCACGT +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSDAAGA*SRCSPR
Trigger: ACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCAGCTGGGCTGGGTGTTaGCCCTCGTGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLSWAGC*PSCSSI
Trigger: GATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCT...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAACGTCTGAGCGCAGCTaGGCTGGGTGTTGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VPLALFCTGGLICSGAQGTSERS*AGCWPS
Trigger: CGAGGGCCAACACCCAGCCCAGCTGCGCTCAGACGT...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGGAGTCCATAGATGGTaGTGCCACCCGGGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSGVHRW*CHPGCT
Trigger: TGTGCACCCCGGGTGGCACCACCATCTATGGACTCC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCGGAGTCCATAGATGGTaGTGCCACCCGGGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLGVHRW*CHPGCT
Trigger: TGTGCACCCCGGGTGGCACCACCATCTATGGACTCC...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCGTGGAGTCCATAGATaGTGGTGCCACCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHRGVHR*WCHPGC
Trigger: GCACCCCGGGTGGCACCACCATCTATGGACTCCACG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCGTGGAGTCCATAGATaGTGGTGCCACCCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPRGVHR*WCHPGC
Trigger: GCACCCCGGGTGGCACCACCATCTATGGACTCCACG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGAGAGGCAGGAAAGGATaGCCAGAGCCCAGCCTACTT +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRRGRKG*PEPSLL
Trigger: AAGTAGGCTGGGCTCTGGCCATCCTTTCCTGCCTCT...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CGCGCCATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: RAITMAPSWTTQGRLGKTNVAAR*AHCSKG
Trigger: CCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATT...GGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp ACAGGCCTCCAGCAGATGCTGCAGGAGCTTGGTCTCGCTGCTCCCCACGTGGCGCAAGACGCCATCTCTTaGGCCCCTCAGAACCAATGT +
Preference number: 4 (lower is better)
Translates to: TGLQQMLQELGLAAPHVAQDAIS*APQNQC
Trigger: ACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTG...CGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGACAAGACGCCATCTCTTaGGCCCCTCAGAACCAATGT +
Preference number: 4 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGQDAIS*APQNQC
Trigger: ACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTG...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCGGTCTGCATGTGTCCTaGCTGGCCAGGGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGGLHVS*LARATL
Trigger: GAGGGTGGCCCTGGCCAGCCAGGACACATGCAGACC...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GCAGATGGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCGGGCCCAGAGCCACCTaGCCACTTGTCAGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: ADGLGVNAGGRQKGCPPSGPRAT*PLVRSL
Trigger: TAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCC...GGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCCAGAGGCCAGTGTGGTaGTGCCAGAGCTACGGGGTA +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPQRPVW*CQSYGV
Trigger: TACCCCGTAGCTCTGGCACCACCACACTGGCCTCTG...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCACCTAGCCTTCAATCCTaGGGGTTTGCTTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPPSLQS*GFASPL
Trigger: CAGGGGAGAAGCAAACCCCCAGGATTGAAGGCTAGG...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGAGAGCTGCAGCAGTTaGGGCCAGCGTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRESCSS*GQRGTG
Trigger: TCCAGTCCCACGCTGGCCCCAACTGCTGCAGCTCTC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CAGGCCCTCACCAGCTGGGCCAGGAGTGGCTGGCTTGGGATCTCCACCTCCCGAGCAATCTCCGCCTCCTaGATTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QALTSWARSGWLGISTSRAISAS*IQAILL
Trigger: CAGGAGAATTGCTTGAATCCAGGAGGCGGAGATTGC...TCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCCAGGAGTGGCTGGCTTaGGATCTCCACCTCCCGAGC +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAQEWLA*DLHLPS
Trigger: GCTCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTG...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGATGGGCCAGGAGTGGCTaGCTTGGGATCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRWARSG*LGISTS
Trigger: GGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCA...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGCACAGGGGAGGCCTaGCTCACCACAACGCTCCCT +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTGTGEA*LTTTLP
Trigger: AGGGAGCGTTGTGGTGAGCCAGGCCTCCCCTGTGCC...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CAA 72 bp GCGTGCTGCTGTCCTGCAGGTGCCGTTAGCCCTGTTTaGCACTGGTGGATTGATCTGCTCAGGCGCACAGGG +
Preference number: 4 (lower is better)
Translates to: ACCCPAGAVSPV*HWWIDLLRRTG
Trigger: CCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAGGACAGCAGCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCTGGCCAGTATGTGCTaGGCTTCCACTTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRLASMC*ASTFPA
Trigger: AGCAGGAAAAGTGGAAGCTCAGCACATACTGGCCAG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
CDS-3UTR TCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSAWWQR*RAGSSA
Trigger: TGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp GACACCCCAGCAGCCACGGACACCAAGATGTGTTCAGTGGTGACCACAGGAGCCGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DTPAATDTKMCSVVTTGAAWWQR*RAGSSA
Trigger: TGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGC...GGCTCCTGTGGTCACCACTGAACACATCTTGGTGTCCGTGGCTGCTGGGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR TCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAACAGCTGGCAGCACATaGGGCTTGGTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQTAGST*GLVAKM
Trigger: CATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGT...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGCCACGCCACTGCCACTaGGGCCAGTGTGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWPRHCH*GQCGCR
Trigger: TCGACATCCACACTGGCCTCAGTGGCAGTGGCGTGG...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACATGGGCATGCCCATCTTaGCGGCTCCTTCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTWACPS*RLLQPG
Trigger: CCCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCA...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGAACCATGCGGGCAAATaGCCAAGACGCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRNHAGK*PRRHLL
Trigger: CAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTT...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCCCCTAGAGCTGAGATaGGGCAGCCGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWPLELR*GSRPGC
Trigger: ACAGCCAGGCCGGCTGCCTCATCTCAGCTCTAGGGG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCTCCTTAGCAGGGGATaGGCACGCCCACCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGLLSRG*ARPPQP
Trigger: TGGCTGTGGTGGGCGTGCTCATCCCCTGCTAAGGAG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCGGTTTGCTTCTCCCCTaGGTCCTGGCTTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLGLLLP*VLAFLT
Trigger: GGTCAGGAAAGCCAGGACTCAGGGGAGAAGCAAACC...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCATTGGTCTCAAACTCCTaGCTTTGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPLVSNS*LCDLPA
Trigger: GGCGGGCAGATCACAAAGTCAGGAGTTTGAGACCAA...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR GCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACACAGCTGCCATCTTGTTaGCTCGGACGCCGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTQLPSC*LGRRCA
Trigger: AGCGCAGCGGCGTCCGAGGCAACAAGATGGCAGCTG...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCAGACGGCTCCGCAGCTaGCATCTTGTTGCCTCGGAC +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARARRLRS*HLVASD
Trigger: GTCCGAGGCAACAAGATGGCAGCTGCGGAGCCGTCT...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGGTTCCTGTCTGTTGGTaGACTGGCCAGTATGTGCTG +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRVPVCW*TGQYVL
Trigger: CAGCACATACTGGCCAGTGCACCAACAGACAGGAAC...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGGTTCCTGTCTGTTGGTaGACTGGCCAGTATGTGCTG +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLVPVCW*TGQYVL
Trigger: CAGCACATACTGGCCAGTGCACCAACAGACAGGAAC...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATACCTCCTGGTTGGAGTaGGTGGTCCGGCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHTSWLE*VVRQPR
Trigger: TCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGT...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGCACAGGAGCCACCTCTaGCAGGACAGCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWHRSHL*QDSWQH
Trigger: GTGCTGCCAGCTGTCCTGGCAGAGGTGGCTCCTGTG...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGCAGCTCCTCCAGGGTaGTCAGAGACACCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTAAPPG*SETPQQ
Trigger: CTGCTGGGGTGTCTCTGAGCACCCTGGAGGAGCTGC...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACAGGCCTCCAGCAGATaGTGCAGGAGCTTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRQASSR*CRSLVS
Trigger: CGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCAGGCCTCCAGCAGATaGTGCAGGAGCTTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHQASSR*CRSLVS
Trigger: CGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCAGGGCCTCGGAGAATaGACACACGAAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGQGLGE*THEGHA
Trigger: GGCGTGGCCTTCGTGTGTGCATTCTCCGAGGCCCTG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCGGGTGTTGGCCCTCGTaGAGCAGCATCTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGGCWPS*SSILAV
Trigger: GACGGCCAAGATGCTGCTGCACGAGGGCCAACACCC...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHSRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCCAAGTCCTGCCCCCTaGATTTCCCTGTGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPPSPAP*ISLCKG
Trigger: CCCCTTGCACAGGGAAATGCAGGGGGCAGGACTTGG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSEPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCACCACGGTGCCTTCTaGTCACTGGGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGHHGAF*SLGREE
Trigger: CTCCTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGCACCACGGTGCCTTCTaGTCACTGGGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWHHGAF*SLGREE
Trigger: CTCCTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTG...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCGAGCCACCACCACGGTaGCTTCTGCTCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGEPPPR*LLLTGE
Trigger: CTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTC...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CGCGCCATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RAITMAPSWTTQGRLGKTPQNQC*SKVGSL
Trigger: CAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGG...GGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLPQNQC*SKVGSL
Trigger: CAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGG...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCCGGCCTGGCTGTAGCTaGACGGAGCCACCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: LFMASTNCPTMRANDQDARPGCS*TEPPGK
Trigger: CTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCG...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCGGCCCCTGGCTTTACTaGAGGGGAGAGGGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPGPWLY*RGEGLL
Trigger: CAAGAGACCCTCTCCCCTGCAGTAAAGCCAGGGGCC...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGGGCCCCTGGCTTTACTaGAGGGGAGAGGGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQGPWLY*RGEGLL
Trigger: CAAGAGACCCTCTCCCCTGCAGTAAAGCCAGGGGCC...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCTGGCCCAGCAGCTCCTaGTCCTTAGCAGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAWPSSS*SLAGDE
Trigger: CTCATCCCCTGCTAAGGAGCAGGAGCTGCTGGGCCA...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCGGAAGCCGAGAGCTaGAGCAGTTGGGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWAEAES*SSWGQR
Trigger: ACGCTGGCCCCAACTGCTGCAGCTCTCGGCTTCCGC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCAGGGATGGAGCGTGCTaGTGTCCTGCAGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLRDGAC*CPAGAV
Trigger: AACGGCACCTGCAGGACAGCAGCACGCTCCATCCCT...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCATGAGGGATGGAGCGTaGTGCTGTCCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLMRDGA*CCPAGA
Trigger: GGCACCTGCAGGACAGCAGCACGCTCCATCCCTCAT...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGATGATCTTGGCTCTCTaGAATCTCCGCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWMILAL*NLRLLD
Trigger: ATCCAGGAGGCGGAGATTGCAGAGAGCCAAGATCAT...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATAACCCCGCCTCTCGCTaGTTATTGGCCCGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHNPASR*LLARKG
Trigger: GCCCTTTCGGGCCAATAAGCAGCGAGAGGCGGGGTT...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACAGCTCTGGGAGGCATaGGGTACTGCCAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSQLWEA*GTARFH
Trigger: GTGAAACCTGGCAGTACCGCATGCCTCCCAGAGCTG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACCTGGGGTGACAGCGTaGAGGGGAAACTGCAATTCC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSPGVTA*RGNCNS
Trigger: GGAATTGCAGTTTCCCCTGCACGCTGTCACCCCAGG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGCCTGGTTGGAGTGCGTaGTCCGGCAACCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQPGWSA*SGNPEL
Trigger: AAGCTCTGGGTTGCCGGACCACGCACTCCAACCAGG...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCCTGGTTGGAGTGCGTaGTCCGGCAACCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHPGWSA*SGNPEL
Trigger: AAGCTCTGGGTTGCCGGACCACGCACTCCAACCAGG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGCAGCACCTCCTGGTTaGAGTGCGTGGTCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTAAPPG*SAWSGN
Trigger: GTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGC...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCTCTGCAGCACCTCCTaGTTGGAGTGCGTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGLCSTS*LECVVR
Trigger: CCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACACTCTGCAGCACCTCCTaGTTGGAGTGCGTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTLCSTS*LECVVR
Trigger: CCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAG...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACTCTGCCAGGACAGCTaGCAGCACATGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSLCQDS*QHMRLG
Trigger: ACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCCAGCACCCGTGTGTTTaGGGGCAGCAGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LFMASTNCPTMRANDQDAQHPCV*GQQLLQ
Trigger: CTGGAGGAGCTGCTGCCCCCAAACACACGGGTGCTG...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWPHRAG*ARPAAP
Trigger: GGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAACTATGGCCCCTTCCTaGACCACACAGGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSTMAPS*TTQGRL
Trigger: CAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGT...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCCCCGCGCCATCACTATaGCCCCTTCCTGGACCACAC +
Preference number: 4 (lower is better)
Translates to: LFMASTNCPTMRANDQDAPAPSL*PLPGPH
Trigger: GTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGG...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCCCGCGCCATCACTATaGCCCCTTCCTGGACCACAC +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGPAPSL*PLPGPH
Trigger: GTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCGATGCTGCAGGAGCTTaGTCTCGCTGCTCCCCACGT +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARADAAGA*SRCSPR
Trigger: ACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATC...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACTGGGCAGCGATGCGGTaGGCCAGGCTGCTGGGCATG +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDWAAMR*ARLLGM
Trigger: CATGCCCAGCAGCCTGGCCCACCGCATCGCTGCCCA...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGGAGTCCATAGATGGTaGTGCCACCCGGGGTGCACA +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHGVHRW*CHPGCT
Trigger: TGTGCACCCCGGGTGGCACCACCATCTATGGACTCC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGGAGTCCATAGATGGTaGTGCCACCCGGGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLGVHRW*CHPGCT
Trigger: TGTGCACCCCGGGTGGCACCACCATCTATGGACTCC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQNVAAR*AHCSKG
Trigger: CCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATT...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp AGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTGCTGTCCTCAAGACGCCATCTCTTaGGCCCCTCAGAACCAATGT +
Preference number: 4 (lower is better)
Translates to: SPWPQRQLSMRDGACCCPQDAIS*APQNQC
Trigger: ACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTG...AGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCTGTGCAGACCCCATATaGCTCGTGCCCCCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPSEASVVVPELRGIPGPCADPI*LVPPRA
Trigger: AGCTCTAGGGGGCACGAGCCATATGGGGTCTGCACA...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGTCAGGCCAGGGCCCCTaGCTTTACTGCAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWSGQGP*LYCRGE
Trigger: CTCTCCCCTGCAGTAAAGCCAGGGGCCCTGGCCTGA...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GCAGATGGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTCCGTTAGGGACAGGTaGAGGGGCCAAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: ADGLGVNAGGRQKGCPPSSVRDR*RGQVLP
Trigger: TGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGA...GGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAACCTAGCCTTCAATCCTaGGGGTTTGCTTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQPSLQS*GFASPL
Trigger: CAGGGGAGAAGCAAACCCCCAGGATTGAAGGCTAGG...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCACCTGTTTTGCACTGGTaGATTGATCTGCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPPVLHW*IDLLRR
Trigger: GCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGG...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCAAGGGCAGAAGTCCGTaGCCGCAGAGGCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGKGRSP*PQRQLS
Trigger: GCTCAGCTGCCTCTGCGGCCACGGACTTCTGCCCTT...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGCCAGGGCCAGGCTTaGACCAAGCAGTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSCQGQA*TKQSTE
Trigger: CTCAGTTGACTGCTTGGTCCAAGCCTGGCCCTGGCA...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAGCCCAGCCCAGAACTTaGTTTTATCCACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPAQPRT*FYPPLV
Trigger: CACCAGAGGTGGATAAAACCAAGTTCTGGGCTGGGC...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp TCCCGCCTCACCTCCAGAGGCTGTTGGGCGGAAGCCGAGAGCTGCAGCAGTTGGGCAATCTCCGCCTCCTaGATTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SRLTSRGCWAEAESCSSWAISAS*IQAILL
Trigger: CAGGAGAATTGCTTGAATCCAGGAGGCGGAGATTGC...CCAACTGCTGCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTGAGGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGAGCTTCCACTTTTCTaGGACGGCACACTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHELPLF*DGTLRP
Trigger: CGGCCGGAGTGTGCCGTCCCAGAAAAGTGGAAGCTC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCTGGCATACAGTCCCCTaGGGTGACAGCGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGWHTVP*GDSVQG
Trigger: CCCCTGCACGCTGTCACCCCAGGGGACTGTATGCCA...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp GGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGCCTTGCAGATGGGCTTaGTGTGAATGCAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GLGVNAGGRQKGCPPSFRPCRWA*CECRWP
Trigger: CGGCCACCTGCATTCACACCAAGCCCATCTGCAAGG...CCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
3UTR CAA 72 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACTGCAGCAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPM*QQGGLTAARGR
Trigger: TCTGCCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLAWWQR*RAGSSA
Trigger: TGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHAWWQR*RAGSSA
Trigger: TGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAACAGCTGGCAGCACATaGGGCTTGGTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSTAGST*GLVAKM
Trigger: CATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGT...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCAGATGTGTTCAGTGGTaGCCACAGGAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LPSEASVVVPELRGIPGPRCVQW*PQEPPL
Trigger: CAGAGGTGGCTCCTGTGGTCACCACTGAACACATCT...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAAGATGTGTTCAGTGGTaGCCACAGGAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSRCVQW*PQEPPL
Trigger: CAGAGGTGGCTCCTGTGGTCACCACTGAACACATCT...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCACGCCACTGCCACTaGGGCCAGTGTGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQPRHCH*GQCGCR
Trigger: TCGACATCCACACTGGCCTCAGTGGCAGTGGCGTGG...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACCCCCTAGAGCTGAGATaGGGCAGCCGGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDPLELR*GSRPGC
Trigger: ACAGCCAGGCCGGCTGCCTCATCTCAGCTCTAGGGG...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAGTATTCCAGGACCCCTaGCCTAGGCACGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQVFQDP*PRHGAG
Trigger: TCCTGCCCCGTGCCTAGGTCAGGGGTCCTGGAATAC...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCGGTTTGCTTCTCCCCTaGGTCCTGGCTTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAGLLLP*VLAFLT
Trigger: GGTCAGGAAAGCCAGGACTCAGGGGAGAAGCAAACC...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCGACCAAGCAGTCAACTaGGTCAGCCTGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLDQAVN*VSLPWE
Trigger: TTCCCAGGGCAGGCTGACTCAGTTGACTGCTTGGTC...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp ATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCGACTCTTCTGGACCCTaGAGTATGGCTGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: ITMAPSWTTQGRLGKTRSDSSGP*SMAALM
Trigger: CATCAGAGCAGCCATACTTCAGGGTCCAGAAGAGTC...GCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR TCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCTGGCCAGTATGTGCTaGGCTTCCACTTTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRLASMC*ASTFPV
Trigger: TACAGGAAAAGTGGAAGCTCAGCACATACTGGCCAG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAAGCTTCCACTTTTCCTaGTCTGATGAGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSSFHFS*SDEALR
Trigger: GCGCAGGGCCTCATCAGAGCAGGAAAAGTGGAAGCT...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCACCTCCTGGTTGGAGTaGGTGGTCCGGCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LFMASTNCPTMRANDQDATSWLE*VVRQPR
Trigger: TCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGT...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCACAGGAGCCACCTCTaGCAGGACAGCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWHRSHL*QDSWQH
Trigger: GTGCTGCCAGCTGTCCTGGCAGAGGTGGCTCCTGTG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGCAGGCCTCCAGCAGATaGTGCAGGAGCTTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWQASSR*CRSLVS
Trigger: CGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTG...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACAGGGCCTCGGAGAATaGACACACGAAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAQGLGE*THEGHA
Trigger: GGCGTGGCCTTCGTGTGTGCATTCTCCGAGGCCCTG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAGGGTGTTGGCCCTCGTaGAGCAGCATCTTGGCCGTC +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQGCWPS*SSILAV
Trigger: GACGGCCAAGATGCTGCTGCACGAGGGCCAACACCC...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWSRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHEPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLREPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACGGCCTGGCTGTAGCTaGACGGAGCCACCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQRPGCS*TEPPGK
Trigger: CTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCG...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCGGAGAGGGTCTCTTGTaGAGACCCCATATGGCTCGT +
Preference number: 4 (lower is better)
Translates to: LPSEASVVVPELRGIPGPGEGLL*RPHMAR
Trigger: ACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCC...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCGGCCCCTGGCTTTACTaGAGGGGAGAGGGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LFMASTNCPTMRANDQDAGPWLY*RGEGLL
Trigger: CAAGAGACCCTCTCCCCTGCAGTAAAGCCAGGGGCC...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACTAAAGCCAGGGGTCTaGATGTGTCCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRLKPGV*MCPGWP
Trigger: TGGCCAGCCAGGACACATGCAGACCCCTGGCTTTAG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCGGAGGGGCCAAGTCTTaGCATCAGAGGCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LFMASTNCPTMRANDQDAGGAKS*HQRPVW
Trigger: CCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCC...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGGAGGGGCCAAGTCTTaGCATCAGAGGCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VPLALFCTGGLICSGAQGGGAKS*HQRPVW
Trigger: CCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCC...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCTCGCTGAGGGCATaGTCCCGCCTCACCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDASLRA*SRLTSR
Trigger: TCTGGAGGTGAGGCGGGAGCATGCCCTCAGCGAGGC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTGCTGTCCTCCGTTAGCCCTGTTTTaGACTGGTGGATTGATCTGC +
Preference number: 4 (lower is better)
Translates to: SPWPQRQLSMRDGACCCPPLALF*TGGLIC
Trigger: GCAGATCAATCCACCAGTGCAAAACAGGGCTAACGG...AGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGAGGGATGGAGCGTGCTaGTGTCCTGCAGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWRDGAC*CPAGAV
Trigger: AACGGCACCTGCAGGACAGCAGCACGCTCCATCCCT...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCATGAGGGATGGAGCGTaGTGCTGTCCTGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGMRDGA*CCPAGA
Trigger: GGCACCTGCAGGACAGCAGCACGCTCCATCCCTCAT...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCCTGACTTTGTGATCTaGCCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPPDFVI*PPRPPK
Trigger: TTTGGGAGGCCGAGGCGGGCAGATCACAAAGTCAGG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCAGCTCTGGGAGGCATaGGGTACTGCCAGGTTTCAC +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPQLWEA*GTARFH
Trigger: GTGAAACCTGGCAGTACCGCATGCCTCCCAGAGCTG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGTGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRCLLVH*PVCAEL
Trigger: AAGCTCAGCACATACTGGCCAGTGCACCAACAGACA...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCTCTGCCAGGACAGCTaGCAGCACATGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHLCQDS*QHMRLG
Trigger: ACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGACTATGGCCCCTTCCTaGACCACACAGGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQTMAPS*TTQGRL
Trigger: CAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGT...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTTGGTGCACTGGCCAGTATGTGTCCCCAGCAGGGTCTaGGCAGCGATGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PELESDIGSCLLVHWPVCVPSRV*AAMRWA
Trigger: GGCCCACCGCATCGCTGCCCAGACCCTGCTGGGGAC...ACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAAGCTGGGCTGGGTGTTaGCCCTCGTGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQSWAGC*PSCSSI
Trigger: GATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCT...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGAGAGGCAGGAAAGGATaGCCAGAGCCCAGCCTACTT +
Preference number: 4 (lower is better)
Translates to: GLGVNAGGRQKGCPPSFRRGRKG*PEPSLL
Trigger: AAGTAGGCTGGGCTCTGGCCATCCTTTCCTGCCTCT...CCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAACAAGACGCCATCTCTTaGGCCCCTCAGAACCAATGT +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQQDAIS*APQNQC
Trigger: ACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTG...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CAGGCAGCTCTGCAGCACCTCCTGGTTGGAGTGCGTGGTCCGGCAACCCAGAGCCGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: QAALQHLLVGVRGPATQSRKFCS*PQPTAQ
Trigger: TTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACG...GCTCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCAGAGCTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGAGAGCTGCAGCAGTTaGGGCCAGCGTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWESCSS*GQRGTG
Trigger: TCCAGTCCCACGCTGGCCCCAACTGCTGCAGCTCTC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAACCTCCAGAGGCTGTTaGGCGGAAGCCGAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVATSRGC*AEAESC
Trigger: GCAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGT...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCAAGCCCTGTTTTGCACTaGTGGATTGATCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPSPVLH*WIDLLR
Trigger: CCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCT...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCTGCCAGGGCCAGGCTTaGACCAAGCAGTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARACQGQA*TKQSTE
Trigger: CTCAGTTGACTGCTTGGTCCAAGCCTGGCCCTGGCA...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACCAGGCCTCAACTTATaGGGCAGGCATTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSPGLNL*GRHWTF
Trigger: GAAGGTCCAATGCCTGCCCCATAAGTTGAGGCCTGG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR TCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACTGGCCAGTATGTGCTaGGCTTCCACTTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSLASMC*ASTFPA
Trigger: AGCAGGAAAAGTGGAAGCTCAGCACATACTGGCCAG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
CDS-3UTR TCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCACAGCTGGCAGCACATaGGGCTTGGTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARATAGST*GLVAKM
Trigger: CATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGT...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACAGCTGGCAGCACATaGGGCTTGGTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRTAGST*GLVAKM
Trigger: CATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGT...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATACAGCTGGCAGCACATaGGGCTTGGTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHTAGST*GLVAKM
Trigger: CATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGT...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR TCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCAGATGTGTTCAGTGGTaGCCACAGGAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPRCVQW*PQEPPL
Trigger: CAGAGGTGGCTCCTGTGGTCACCACTGAACACATCT...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCAGATGTGTTCAGTGGTaGCCACAGGAGCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARARCVQW*PQEPPL
Trigger: CAGAGGTGGCTCCTGTGGTCACCACTGAACACATCT...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATTTTGCACTGGTGGATTaGTCTGCTCAGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHFALVD*SAQAHR
Trigger: CCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAA...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGACCAAGCAGTCAACTaGGTCAGCCTGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VPLALFCTGGLICSGAQGDQAVN*VSLPWE
Trigger: TTCCCAGGGCAGGCTGACTCAGTTGACTGCTTGGTC...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCAGCTTCCACTTTTCCTaGTCTGATGAGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPSFHFS*SDEALR
Trigger: GCGCAGGGCCTCATCAGAGCAGGAAAAGTGGAAGCT...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATAGCTTCCACTTTTCCTaGTCTGATGAGGCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHSFHFS*SDEALR
Trigger: GCGCAGGGCCTCATCAGAGCAGGAAAAGTGGAAGCT...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAGTTCCTGTCTGTTGGTaGACTGGCCAGTATGTGCTG +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSVPVCW*TGQYVL
Trigger: CAGCACATACTGGCCAGTGCACCAACAGACAGGAAC...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCGTTCCTGTCTGTTGGTaGACTGGCCAGTATGTGCTG +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLVPVCW*TGQYVL
Trigger: CAGCACATACTGGCCAGTGCACCAACAGACAGGAAC...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGACCTCCTGGTTGGAGTaGGTGGTCCGGCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWTSWLE*VVRQPR
Trigger: TCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGT...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCAGCTCCTCCAGGGTaGTCAGAGACACCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDAAPPG*SETPQQ
Trigger: CTGCTGGGGTGTCTCTGAGCACCCTGGAGGAGCTGC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACAGGCCTCCAGCAGATaGTGCAGGAGCTTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAQASSR*CRSLVS
Trigger: CGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGTCCATAGATGGTGGTaGCACCCGGGGTGCACACGT +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWVHRWW*HPGCTR
Trigger: ACGTGTGCACCCCGGGTGGCACCACCATCTATGGAC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLPQNQC*SKVGSL
Trigger: CAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGG...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPPQNQC*SKVGSL
Trigger: CAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGG...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCATGGCCTCAACCAACTaGCCAACCATGCGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLMASTN*PTMRAN
Trigger: ATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCAT...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGGAGAGGGTCTCTTGTaGAGACCCCATATGGCTCGT +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRGEGLL*RPHMAR
Trigger: ACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAAGGCCAGTGTGGTGGTaGCAGAGCTACGGGGTATTC +
Preference number: 4 (lower is better)
Translates to: VPLALFCTGGLICSGAQGRPVWW*QSYGVF
Trigger: GAATACCCCGTAGCTCTGGCACCACCACACTGGCCT...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAAGGGATGGAGCGTGCTaGTGTCCTGCAGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQRDGAC*CPAGAV
Trigger: AACGGCACCTGCAGGACAGCAGCACGCTCCATCCCT...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCTGACCCTGACAAGTaGCAGGGCCAGGCTTGGACC +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDADPDK*QGQAWT
Trigger: GGTCCAAGCCTGGCCCTGGCACTTGTCAGGGTCAGC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCCTGACTTTGTGATCTaGCCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGPDFVI*PPRPPK
Trigger: TTTGGGAGGCCGAGGCGGGCAGATCACAAAGTCAGG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCTGGGCTTGGTGTGAATaGAGGTGGCCGTCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGWAWCE*RWPSEG
Trigger: CCCTTCTGACGGCCACCTGCATTCACACCAAGCCCA...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp ATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCTGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: ITMAPSWTTQGRLGKTRSCLLVH*PVCAEL
Trigger: AAGCTCAGCACATACTGGCCAGTGCACCAACAGACA...GCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCCTGGTTGGAGTGCGTaGTCCGGCAACCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWPGWSA*SGNPEL
Trigger: AAGCTCTGGGTTGCCGGACCACGCACTCCAACCAGG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGCTCTGCCAGGACAGCTaGCAGCACATGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWLCQDS*QHMRLG
Trigger: ACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAG...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCCTCTGCCAGGACAGCTaGCAGCACATGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LFMASTNCPTMRANDQDALCQDS*QHMRLG
Trigger: ACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAG...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAACTATGGCCCCTTCCTaGACCACACAGGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTTMAPS*TTQGRL
Trigger: CAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGT...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGATGCTGCAGGAGCTTaGTCTCGCTGCTCCCCACGT +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWDAAGA*SRCSPR
Trigger: ACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGAGAGGCAGGAAAGGATaGCCAGAGCCCAGCCTACTT +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQRGRKG*PEPSLL
Trigger: AAGTAGGCTGGGCTCTGGCCATCCTTTCCTGCCTCT...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp GCCTGTAGCAGGCATGGGGAGACCTCTGCTGTCCACAGTGCCAGCACCCCCTTCCGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ACSRHGETSAVHSASTPFRKFCS*PQPTAQ
Trigger: TTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACG...GAAGGGGGTGCTGGCACTGTGGACAGCAGAGGTCTCCCCATGCCTGCTACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCACGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPRKFCS*PQPTAQ
Trigger: TTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACG...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACTCAGGCCAGGGCCCCTaGCTTTACTGCAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDSGQGP*LYCRGE
Trigger: CTCTCCCCTGCAGTAAAGCCAGGGGCCCTGGCCTGA...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGGGCCCAGAGCCACCTaGCCACTTGTCAGGAGCTTA +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWGPRAT*PLVRSL
Trigger: TAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCAGAGGCCAGTGTGGTaGTGCCAGAGCTACGGGGTA +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWQRPVW*CQSYGV
Trigger: TACCCCGTAGCTCTGGCACCACCACACTGGCCTCTG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCTCCGTTAGGGACAGGTaGAGGGGCCAAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGSVRDR*RGQVLP
Trigger: TGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGA...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCCCTAGCCTTCAATCCTaGGGGTTTGCTTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAPSLQS*GFASPL
Trigger: CAGGGGAGAAGCAAACCCCCAGGATTGAAGGCTAGG...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCCCTGTTTTGCACTGGTaGATTGATCTGCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPPVLHW*IDLLRR
Trigger: GCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGG...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAAAGCCCTGTTTTGCACTaGTGGATTGATCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQSPVLH*WIDLLR
Trigger: CCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCT...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCTGCCAGGGCCAGGCTTaGACCAAGCAGTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: LFMASTNCPTMRANDQDACQGQA*TKQSTE
Trigger: CTCAGTTGACTGCTTGGTCCAAGCCTGGCCCTGGCA...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCATCACTTGGTGCTCTCTaGCCTCTTTATTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: AGLAVAARSHLESQRQAPSLGAL*PLYSHL
Trigger: GAGATGGGAATAAAGAGGCCAGAGAGCACCAAGTGA...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAGGGGTTTCTCCATGTTaGTCAGGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPGVSPC*SGWSQT
Trigger: AGTTTGAGACCAACCTGACCAACATGGAGAAACCCC...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
3UTR CAA 72 bp CTGCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATaGATCTGCTCAGGCGCACAGGGAGATGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LQVPLALFCTGG*ICSGAQGDGTA
Trigger: TGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWAWWQR*RAGSSA
Trigger: TGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATAACCATGCGGGCAAATaGCCAAGACGCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHNHAGK*PRRHLL
Trigger: CAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTT...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGAACCATGCGGGCAAATaGCCAAGACGCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQNHAGK*PRRHLL
Trigger: CAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTT...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCAACCATGCGGGCAAATaGCCAAGACGCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPNHAGK*PRRHLL
Trigger: CAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTT...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCATTTATCCACCTCTGGTaGAACATGAGCTCACTTGGT +
Preference number: 4 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPFIHLW*NMSSLG
Trigger: ACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAA...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR TCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCTTGGTCTCAAACTCCTaGCTTTGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPLVSNS*LCDLPA
Trigger: GGCGGGCAGATCACAAAGTCAGGAGTTTGAGACCAA...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR TCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCTGGCCAGTATGTGCTaGGCTTCCACTTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHLASMC*ASTFLG
Trigger: TCCCAGAAAAGTGGAAGCTCAGCACATACTGGCCAG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS-3UTR TCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAGCTGACACCTGTGCTTaGCCAAGGTTCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQADTCA*PRFQAS
Trigger: TGAGGCCTGGAACCTTGGTCAAGCACAGGTGTCAGC...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGTTCCTGTCTGTTGGTaGACTGGCCAGTATGTGCTG +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRVPVCW*TGQYVL
Trigger: CAGCACATACTGGCCAGTGCACCAACAGACAGGAAC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGTTCCTGTCTGTTGGTaGACTGGCCAGTATGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHVPVCW*TGQYVL
Trigger: CAGCACATACTGGCCAGTGCACCAACAGACAGGAAC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR GCA 90 bp AGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCAACCTCCTGGTTGGAGTaGGTGGTCCGGCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: SRACYRKFCSWPQPTAQPTSWLE*VVRQPR
Trigger: TCTGGGTTGCCGGACCACGCACTCCAACCAGGAGGT...TGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp AGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCACAGGCCTCCAGCAGATaGTGCAGGAGCTTGGTCTCG +
Preference number: 4 (lower is better)
Translates to: SRACYRKFCSWPQPTAQPQASSR*CRSLVS
Trigger: CGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTG...TGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACAGTAGGAGACCCTCATaGAGGAGGGAGGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDSRRPS*RREGAA
Trigger: TGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACT...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAGAACCTCCCAAGTCCTaGCCCCTGCATTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQEPPKS*PLHFPV
Trigger: CACAGGGAAATGCAGGGGGCAGGACTTGGGAGGTTC...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHPQNQC*SKVGSL
Trigger: CAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAATGGCCTCAACCAACTaGCCAACCATGCGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRMASTN*PTMRAN
Trigger: ATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCAT...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp AGCCACGGACACCAAGATGTGTTCAGTGGTGACCACAGGAGCCACCTCTGCCAGATGGCCTCAACCAACTaGCCAACCATGCGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: SHGHQDVFSGDHRSHLCQMASTN*PTMRAN
Trigger: ATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCAT...CTGGCAGAGGTGGCTCCTGTGGTCACCACTGAACACATCTTGGTGTCCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGGAGAGGGTCTCTTGTaGAGACCCCATATGGCTCGT +
Preference number: 4 (lower is better)
Translates to: VPLALFCTGGLICSGAQGGEGLL*RPHMAR
Trigger: ACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCC...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGGCCCCTGGCTTTACTaGAGGGGAGAGGGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDGPWLY*RGEGLL
Trigger: CAAGAGACCCTCTCCCCTGCAGTAAAGCCAGGGGCC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCTAAAGCCAGGGGTCTaGATGTGTCCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWLKPGV*MCPGWP
Trigger: TGGCCAGCCAGGACACATGCAGACCCCTGGCTTTAG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGGAGGGGCCAAGTCTTaGCATCAGAGGCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDGGAKS*HQRPVW
Trigger: CCACACTGGCCTCTGATGGCAAGACTTGGCCCCTCC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACCGTTAGCCCTGTTTTaGACTGGTGGATTGATCTGC +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSPLALF*TGGLIC
Trigger: GCAGATCAATCCACCAGTGCAAAACAGGGCTAACGG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACCTGACTTTGTGATCTaGCCGCCTCGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAPDFVI*PPRPPK
Trigger: TTTGGGAGGCCGAGGCGGGCAGATCACAAAGTCAGG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSCLLVH*PVCAEL
Trigger: AAGCTCAGCACATACTGGCCAGTGCACCAACAGACA...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAACTATGGCCCCTTCCTaGACCACACAGGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQTMAPS*TTQGRL
Trigger: CAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGT...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCACGTCTGAGCGCAGCTaGGCTGGGTGTTGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCTSERS*AGCWPS
Trigger: CGAGGGCCAACACCCAGCCCAGCTGCGCTCAGACGT...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCAGAGGCAGGAAAGGATaGCCAGAGCCCAGCCTACTT +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGRGRKG*PEPSLL
Trigger: AAGTAGGCTGGGCTCTGGCCATCCTTTCCTGCCTCT...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ATGAGGCTTGGTGGCAAAGATGACGAGCAGGCAGCTCTGCAGCACCTCCTGGTTAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: MRLGGKDDEQAALQHLLVNVAAR*AHCSKG
Trigger: CCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATT...AACCAGGAGGTGCTGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAAATGTTGCAGCAAGGTaGGCTCACTGCAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTNVAAR*AHCSKG
Trigger: CCCCTTGCTGCAGTGAGCCCACCTTGCTGCAACATT...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCCTGTTTTGCACTGGTaGATTGATCTGCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPPVLHW*IDLLRR
Trigger: GCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGCCCTGTTTTGCACTaGTGGATTGATCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLSPVLH*WIDLLR
Trigger: CCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCT...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGCCCAGCCCAGAACTTaGTTTTATCCACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRAQPRT*FYPPLV
Trigger: CACCAGAGGTGGATAAAACCAAGTTCTGGGCTGGGC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR TCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGCTGGCCAGTATGTGCTaGGCTTCCACTTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWLASMC*ASTFPA
Trigger: AGCAGGAAAAGTGGAAGCTCAGCACATACTGGCCAG...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCTTGGTGGCAAAGATaGCGAGCAGGCAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDAWWQR*RAGSSA
Trigger: TGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR TCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAACAGCTGGCAGCACATaGGGCTTGGTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQTAGST*GLVAKM
Trigger: CATCTTTGCCACCAAGCCTCATGTGCTGCCAGCTGT...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp CCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTTGGTGCACTGGCCAGTATGTCCACGCCACTGCCACTaGGGCCAGTGTGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: PELESDIGSCLLVHWPVCPRHCH*GQCGCR
Trigger: TCGACATCCACACTGGCCTCAGTGGCAGTGGCGTGG...ACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR TCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCCTCCTTAGCAGGGGATaGGCACGCCCACCACAGCCA +
Preference number: 4 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCLLSRG*ARPPQP
Trigger: TGGCTGTGGTGGGCGTGCTCATCCCCTGCTAAGGAG...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR TCA 90 bp AGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCAGGTTTGCTTCTCCCCTaGGTCCTGGCTTTCCTGACC +
Preference number: 4 (lower is better)
Translates to: SRACYRKFCSWPQPTAQPGLLLP*VLAFLT
Trigger: GGTCAGGAAAGCCAGGACTCAGGGGAGAAGCAAACC...TGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGTTTGCACTGGTGGATTaGTCTGCTCAGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWFALVD*SAQAHR
Trigger: CCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAA...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCACCTCTGGTGAAACATaGGCTCACTTGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPTSGET*AHLVLS
Trigger: AGAGAGCACCAAGTGAGCTCATGTTTCACCAGAGGT...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR TCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCTCTGGTGAAACATaGGCTCACTTGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRTSGET*AHLVLS
Trigger: AGAGAGCACCAAGTGAGCTCATGTTTCACCAGAGGT...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR TCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGCTGGCCAGTATGTGCTaGGCTTCCACTTTTCCTGTA +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQLASMC*ASTFPV
Trigger: TACAGGAAAAGTGGAAGCTCAGCACATACTGGCCAG...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCCACCACGGTGCCTTCTaGTCACTGGGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCHHGAF*SLGREE
Trigger: CTCCTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTG...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCCTCAGAACCAATGTTaGAGCAAGGTGGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGPQNQC*SKVGSL
Trigger: CAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACCTAAAGCCAGGGGTCTaGATGTGTCCTGGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDLKPGV*MCPGWP
Trigger: TGGCCAGCCAGGACACATGCAGACCCCTGGCTTTAG...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACAGGCCAGTGTGGTGGTaGCAGAGCTACGGGGTATTC +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDRPVWW*QSYGVF
Trigger: GAATACCCCGTAGCTCTGGCACCACCACACTGGCCT...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCACTGGTGGATTGATCTaGTCAGGCGCACAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGTGGLI*SGAQGD
Trigger: ATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGT...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp GCAGGTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAACTGGTGGATTGATCTaGTCAGGCGCACAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: AGAVSPVLHWWIDLLRRTTGGLI*SGAQGD
Trigger: ATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGT...TGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCCGTTAGCCCTGTTTTaGACTGGTGGATTGATCTGC +
Preference number: 4 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLPLALF*TGGLIC
Trigger: GCAGATCAATCCACCAGTGCAAAACAGGGCTAACGG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCATGATCTTGGCTCTCTaGAATCTCCGCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAMILAL*NLRLLD
Trigger: ATCCAGGAGGCGGAGATTGCAGAGAGCCAAGATCAT...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR GCA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCATGATCTTGGCTCTCTaGAATCTCCGCCTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPMILAL*NLRLLD
Trigger: ATCCAGGAGGCGGAGATTGCAGAGAGCCAAGATCAT...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGTGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQCLLVH*PVCAEL
Trigger: AAGCTCAGCACATACTGGCCAGTGCACCAACAGACA...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCGCAGCACCTCCTGGTTaGAGTGCGTGGTCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCAAPPG*SAWSGN
Trigger: GTTGCCGGACCACGCACTCCAACCAGGAGGTGCTGC...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGAGAGGCAGGAAAGGATaGCCAGAGCCCAGCCTACTT +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWRGRKG*PEPSLL
Trigger: AAGTAGGCTGGGCTCTGGCCATCCTTTCCTGCCTCT...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCTCACTTGGTGCTCTCTaGCCTCTTTATTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLSLGAL*PLYSHL
Trigger: GAGATGGGAATAAAGAGGCCAGAGAGCACCAAGTGA...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGCCCAGCCCAGAACTTaGTTTTATCCACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VPLALFCTGGLICSGAQGAQPRT*FYPPLV
Trigger: CACCAGAGGTGGATAAAACCAAGTTCTGGGCTGGGC...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCAGGCCTGCCCAGGCTTaGCATACAGTCCCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCRPAQA*HTVPWG
Trigger: ACCCCAGGGGACTGTATGCCAAGCCTGGGCAGGCCT...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR TCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACTGGCCAGTATGTGCTaGGCTTCCACTTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVALASMC*ASTFPA
Trigger: AGCAGGAAAAGTGGAAGCTCAGCACATACTGGCCAG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACTTTGCACTGGTGGATTaGTCTGCTCAGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDFALVD*SAQAHR
Trigger: CCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAA...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAATTGGTCTCAAACTCCTaGCTTTGTGATCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQLVSNS*LCDLPA
Trigger: GGCGGGCAGATCACAAAGTCAGGAGTTTGAGACCAA...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR TCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGACTCTTCTGGACCCTaGAGTATGGCTGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWDSSGP*SMAALM
Trigger: CATCAGAGCAGCCATACTTCAGGGTCCAGAAGAGTC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR GCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACCCAACTGCCCAACCATaGGGGCAAATGACCAAGACG +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDPTAQP*GQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR GCA 90 bp AGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCACCAACTGCCCAACCATaGGGGCAAATGACCAAGACG +
Preference number: 4 (lower is better)
Translates to: SRACYRKFCSWPQPTAQPPTAQP*GQMTKT
Trigger: CGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG...TGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR GCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGACTGGTGGATTGATCTaGTCAGGCGCACAGGGAGAT +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWTGGLI*SGAQGD
Trigger: ATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGT...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGTGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWCLLVH*PVCAEL
Trigger: AAGCTCAGCACATACTGGCCAGTGCACCAACAGACA...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCCCTGGTTGGAGTGCGTaGTCCGGCAACCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCPGWSA*SGNPEL
Trigger: AAGCTCTGGGTTGCCGGACCACGCACTCCAACCAGG...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACAGAGGCAGGAAAGGATaGCCAGAGCCCAGCCTACTT +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDRGRKG*PEPSLL
Trigger: AAGTAGGCTGGGCTCTGGCCATCCTTTCCTGCCTCT...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCACAAGACGCCATCTCTTaGGCCCCTCAGAACCAATGT +
Preference number: 4 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAQDAIS*APQNQC
Trigger: ACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTG...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRRKFCS*PQPTAQ
Trigger: TTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCTGTTTTGCACTGGTaGATTGATCTGCTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQPVLHW*IDLLRR
Trigger: GCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGG...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCGCAATCTCCGCCTCCTaGATTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGAISAS*IQAILL
Trigger: CAGGAGAATTGCTTGAATCCAGGAGGCGGAGATTGC...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR TCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAACCTCTGGTGAAACATaGGCTCACTTGGTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQTSGET*AHLVLS
Trigger: AGAGAGCACCAAGTGAGCTCATGTTTCACCAGAGGT...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR TCA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGTTTATCCACCTCTGGTaGAACATGAGCTCACTTGGT +
Preference number: 4 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQFIHLW*NMSSLG
Trigger: ACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAA...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR GCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCGTGCAGGGGAAACTaGAATTCCATGCCCTACAAA +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWACRGN*NSMPYK
Trigger: TTTGTAGGGCATGGAATTGCAGTTTCCCCTGCACGC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAGGAGACAGGTGTTGGTaGAAAGTCAATGATTTCTCC +
Preference number: 4 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRGDRCW*KVNDFS
Trigger: GGAGAAATCATTGACTTTGCACCAACACCTGTCTCC...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp CCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTTGGTGCACTGGCCAGTATGTCTCTGCCAGGACAGCTaGCAGCACATGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PELESDIGSCLLVHWPVCLCQDS*QHMRLG
Trigger: ACCAAGCCTCATGTGCTGCCAGCTGTCCTGGCAGAG...ACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp AGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCACAAGACGCCATCTCTTaGGCCCCTCAGAACCAATGT +
Preference number: 4 (lower is better)
Translates to: SRACYRKFCSWPQPTAQPQDAIS*APQNQC
Trigger: ACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTG...TGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGCGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: ASTNCPTMRANDQDAISWRKFCS*PQPTAQ
Trigger: TTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACG...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCTGTGCAGACCCCATATaGCTCGTGCCCCCTAGAGCT +
Preference number: 4 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCCADPI*LVPPRA
Trigger: AGCTCTAGGGGGCACGAGCCATATGGGGTCTGCACA...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCTCCGTTAGGGACAGGTaGAGGGGCCAAGTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCSVRDR*RGQVLP
Trigger: TGGCAAGACTTGGCCCCTCCACCTGTCCCTAACGGA...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAAGCCCTGTTTTGCACTaGTGGATTGATCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQSPVLH*WIDLLR
Trigger: CCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCT...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCTGCCAGGGCCAGGCTTaGACCAAGCAGTCAACTGAG +
Preference number: 4 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCCQGQA*TKQSTE
Trigger: CTCAGTTGACTGCTTGGTCCAAGCCTGGCCCTGGCA...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCTCACTTGGTGCTCTCTaGCCTCTTTATTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGSLGAL*PLYSHL
Trigger: GAGATGGGAATAAAGAGGCCAGAGAGCACCAAGTGA...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGGGGTTTCTCCATGTTaGTCAGGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: VPLALFCTGGLICSGAQGGVSPC*SGWSQT
Trigger: AGTTTGAGACCAACCTGACCAACATGGAGAAACCCC...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACGTAAGTTCTGTTCATaGCCTCAACCAACTGCCCAA +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQRKFCS*PQPTAQ
Trigger: TTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACG...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGGGGTTTCTCCATGTTaGTCAGGTTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWGVSPC*SGWSQT
Trigger: AGTTTGAGACCAACCTGACCAACATGGAGAAACCCC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CCA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAATTTCTCCTTGCAGATaGGCTTGGTGTGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: TRHWASRACYRKFCSWPQISPCR*AWCECR
Trigger: CCTGCATTCACACCAAGCCCATCTGCAAGGAGAAAT...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGGGGGAGACAGGTGTTaGTGCAAAGTCAATGATTTC +
Preference number: 4 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWGGDRC*CKVNDF
Trigger: GAAATCATTGACTTTGCACCAACACCTGTCTCCCCC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACTCACTTGGTGCTCTCTaGCCTCTTTATTCCCATCTC +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDSLGAL*PLYSHL
Trigger: GAGATGGGAATAAAGAGGCCAGAGAGCACCAAGTGA...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR TCA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACTTTATCCACCTCTGGTaGAACATGAGCTCACTTGGT +
Preference number: 4 (lower is better)
Translates to: VLFMASTNCPTMRANDQDFIHLW*NMSSLG
Trigger: ACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAA...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
3UTR CAA 72 bp AACCCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGTGCTGAGCTTCCACTT +
Preference number: 4 (lower is better)
Translates to: NPELESDIGSCL*VHWPVCAELPL
Trigger: AAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CCA 90 bp ACATTGATCAAAGATACCGTAATCATATCCATCGTTTTCTGTCTTGAAGAACAGGGTCTGCATGTGTCCTaGCTGGCCAGGGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: TLIKDTVIISIVFCLEEQGLHVS*LARATL
Trigger: GAGGGTGGCCCTGGCCAGCCAGGACACATGCAGACC...CTGTTCTTCAAGACAGAAAACGATGGATATGATTACGGTATCTTTGATCAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR GCA 90 bp CAGCCCAGAACTTGGTTTTATCCACCTCTGGTGAAACATGAGCTCACTTGGTGCTCAATGATTTCTCCTTaGAGATGGGCTTGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: QPRTWFYPPLVKHELTWCSMISP*RWAWCE
Trigger: TTCACACCAAGCCCATCTGCAAGGAGAAATCATTGA...GCACCAAGTGAGCTCATGTTTCACCAGAGGTGGATAAAACCAAGTTCTGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS GCA 90 bp GCCCGCGCCCACGAAGCCCACGCGCCGCGGAGACGGCTCCGCAGCTaGCATCTTGTTGCCTCGGACGCCGCTGCGCTCACCGCCCATCCA +
Preference number: 5 (lower is better)
Translates to: ARAHEAHAPRRRLRS*HLVASDAAALTAHP
Trigger: TGGATGGGCGGTGAGCGCAGCGGCGTCCGAGGCAACAAGATGGCAGCTGCGGAGCCGTCTCCGCGGCGCGTGGGCTTCGTGGGCGCGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220966.10
ENST00000616663.2
CDS-3UTR CAA 90 bp GGTGGCAGCCTCCACGGCGCTCATGGTGGCTGCTCGCAGCCCGCCCTGCTCCAGTTTCTGCTGAGCTCCTaGGCCCGGCAGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GGSLHGAHGGCSQPALLQFLLSS*ARQVAA
Trigger: GGCTGCCACCTGCCGGGCCAAGGAGCTCAGCAGAAA...CTGGAGCAGGGCGGGCTGCGAGCAGCCACCATGAGCGCCGTGGAGGCTGCCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS CCA 90 bp CAGGCCCCAGCAGGGGCCTCAGGAAAGGTCCACGTCAGCTCGCGGTaGGCTCCAGCGTCTGCCTCCCAGGTACAGCACCAGGAGGGAACC +
Preference number: 5 (lower is better)
Translates to: QAPAGASGKVHVSSR*APASASQVQHQEGT
Trigger: GGTTCCCTCCTGGTGCTGTACCTGGGAGGCAGACGCTGGAGCCCACCGCGAGCTGACGTGGACCTTTCCTGAGGCCCCTGCTGGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482616.1
ENST00000632135.1
CDS CCA 90 bp CCCGCGCCATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTaGGCAAGACCCGCAGCACCCGTGTGTTTGGGGGCAGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: PAPSLWPLPGPHRAG*ARPAAPVCLGAAAG
Trigger: GCCAGCTGCTGCCCCCAAACACACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000482616.1
ENST00000632135.1
CDS-3UTR CAA 90 bp TGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCGCAGCACCCGTGTTTCTGCTGAGCTCCTaGGCCCGGCAGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: WPLPGPHRAGWARPAAPVFLLSS*ARQVAA
Trigger: GGCTGCCACCTGCCGGGCCAAGGAGCTCAGCAGAAA...CACGGGTGCTGCGGGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CAA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCAGCAGCTGCCATCTTGTaGCCTCGGACGCCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPAAAIL*PRTPLR
Trigger: GCGCAGCGGCGTCCGAGGCAACAAGATGGCAGCTGC...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp AGGCACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTTCTGCTGAGCTCCTaGGCCCGGCAGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RHGAGGPRATWPLVRSLGFLLSS*ARQVAA
Trigger: GGCTGCCACCTGCCGGGCCAAGGAGCTCAGCAGAAA...TCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCACAGCTGGGCTGGGTGTaGGCCCTCGTGCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: AGLAVAARSHLESQRQAPQLGWV*ALVQQH
Trigger: ATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCTG...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCAGCTGGGCTGGGTGTaGGCCCTCGTGCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRQLGWV*ALVQQH
Trigger: ATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCTG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGTTTCTGCTGAGCTCCTaGGCCCGGCAGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRFLLSS*ARQVAA
Trigger: GGCTGCCACCTGCCGGGCCAAGGAGCTCAGCAGAAA...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp AGTCCGTGGCCGCAGAGGCAGCTGAGCATGAGGGATGGAGCGTGCTGCTGTCCTCACCTCCAGAGGCTGTaGGGCGGAAGCCGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: SPWPQRQLSMRDGACCCPHLQRL*GGSREL
Trigger: CAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTG...AGGACAGCAGCACGCTCCATCCCTCATGCTCAGCTGCCTCTGCGGCCACGGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CAGGCCCTCACCAGCTGGGCCAGGAGTGGCTGGCTTGGGATCTCCACCTCCCGAACTGAGCCCGTGTCTTaGTCACAGGCCCTCACCAGC +
Preference number: 5 (lower is better)
Translates to: QALTSWARSGWLGISTSRTEPVS*SQALTS
Trigger: GCTGGTGAGGGCCTGTGACAAAGACACGGGCTCAGT...TCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGGCCCAGCTGGTGAGGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS GCA 90 bp GGCCTCAGGAAAGGTCCACGTCAGCTCGCGGTGGGCTCCAGCGTCTaGCTCCCAGGTACAGCACCAGGAGGGAACCCTAAATCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GLRKGPRQLAVGSSV*LPGTAPGGNPKSSH
Trigger: GTGGCTGGATTTAGGGTTCCCTCCTGGTGCTGTACCTGGGAGGCAGACGCTGGAGCCCACCGCGAGCTGACGTGGACCTTTCCTGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482616.1
ENST00000632135.1
CDS-3UTR CAA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCGCAGCTGCCATCTTGTaGCCTCGGACGCCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLAAAIL*PRTPLR
Trigger: GCGCAGCGGCGTCCGAGGCAACAAGATGGCAGCTGC...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCTGGGCATGCCCATCTaGACGGCTCCTTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRLGMPI*TAPSAR
Trigger: CCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCAG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAATTTCTGCTGAGCTCCTaGGCCCGGCAGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQFLLSS*ARQVAA
Trigger: GGCTGCCACCTGCCGGGCCAAGGAGCTCAGCAGAAA...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCCGCAGCTGCCATCTaGTTGCCTCGGACGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSSAAAI*LPRTPL
Trigger: CAGCGGCGTCCGAGGCAACAAGATGGCAGCTGCGGA...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCCACCTCCAGAGGCTGTaGGGCGGAAGCCGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: LPSEASVVVPELRGIPGPHLQRL*GGSREL
Trigger: CAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTG...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp GCAGATGGGCTTGGTGTGAATGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCCCTAGTGCCCAGGGCTaGTCAGAGGTCCCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: ADGLGVNAGGRQKGCPPSPSAQG*SEVPGG
Trigger: TCCCCCTGGGACCTCTGACAAGCCCTGGGCACTAGG...GGAAGGTGGACAGCCCTTCTGACGGCCACCTGCATTCACACCAAGCCCATCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CAA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGCAGCTGCCATCTTGTaGCCTCGGACGCCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: VPLALFCTGGLICSGAQGAAAIL*PRTPLR
Trigger: GCGCAGCGGCGTCCGAGGCAACAAGATGGCAGCTGC...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCACTGGGCATGCCCATCTaGACGGCTCCTTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSLGMPI*TAPSAR
Trigger: CCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCAG...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCAGCTGGGCTGGGTGTaGGCCCTCGTGCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHQLGWV*ALVQQH
Trigger: ATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCTG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACAGCTGGGCTGGGTGTaGGCCCTCGTGCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRQLGWV*ALVQQH
Trigger: ATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCTG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCAGCTGGGCTGGGTGTaGGCCCTCGTGCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLQLGWV*ALVQQH
Trigger: ATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCTG...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGATTTCTGCTGAGCTCCTaGGCCCGGCAGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRFLLSS*ARQVAA
Trigger: GGCTGCCACCTGCCGGGCCAAGGAGCTCAGCAGAAA...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATTTTCTGCTGAGCTCCTaGGCCCGGCAGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHFLLSS*ARQVAA
Trigger: GGCTGCCACCTGCCGGGCCAAGGAGCTCAGCAGAAA...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp CCACCTCCCGAGCTGAGCTCACCTAGTGCCCAGGGCTTGTCAGAGGTCCCAGGGCCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACT +
Preference number: 5 (lower is better)
Translates to: PPPELSSPSAQGLSEVPGPSEPM*QQGGLT
Trigger: AGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGG...CCCTGGGACCTCTGACAAGCCCTGGGCACTAGGTGAGCTCAGCTCGGGAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CAA 90 bp CGCGCCATCACTATGGCCCCTTCCTGGACCACACAGGGCAGGTTGGGCAAGACCCCAAGACGCCATCTCTaGGGCCCCTCAGAACCAATG +
Preference number: 5 (lower is better)
Translates to: RAITMAPSWTTQGRLGKTPRRHL*GPSEPM
Trigger: CATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG...GGTCTTGCCCAACCTGCCCTGTGTGGTCCAGGAAGGGGCCATAGTGATGGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CAA 90 bp GCCTGTAGCAGGCATGGGGAGACCTCTGCTGTCCACAGTGCCAGCACCCCCTTCAGGGGAGAGGGTCTCTaGTGCAGACCCCATATGGCT +
Preference number: 5 (lower is better)
Translates to: ACSRHGETSAVHSASTPFRGEGL*CRPHMA
Trigger: AGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCT...GAAGGGGGTGCTGGCACTGTGGACAGCAGAGGTCTCCCCATGCCTGCTACAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CAA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAATGGAGGGGCCAAGTCTaGCCATCAGAGGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQWRGQV*PSEASV
Trigger: CACACTGGCCTCTGATGGCAAGACTTGGCCCCTCCA...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGCACCTCCAGAGGCTGTaGGGCGGAAGCCGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQHLQRL*GGSREL
Trigger: CAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTG...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp TGCAGGTGGCCGTCAGAAGGGCTGTCCACCTTCCTTCAGGGGGCCGCCTGCACCTTTTGCACTGGTGGATaGATCTGCTCAGGCGCACAG +
Preference number: 5 (lower is better)
Translates to: CRWPSEGLSTFLQGAACTFCTGG*ICSGAQ
Trigger: CTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAA...GGTGCAGGCGGCCCCCTGAAGGAAGGTGGACAGCCCTTCTGACGGCCACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CAA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATTGCAGCACCTCCTGGTaGGAGTGCGTGGTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHCSTSW*ECVVRQ
Trigger: TTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCA...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp CCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCTGCAGCACCTCCTGGTaGGAGTGCGTGGTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: PRRHLLGPSEPMLQQGGLCSTSW*ECVVRQ
Trigger: TTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCA...GAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCTGCAGCACCTCCTGGTaGGAGTGCGTGGTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPCSTSW*ECVVRQ
Trigger: TTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCA...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCTGCAGCACCTCCTGGTaGGAGTGCGTGGTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: WLYCRGEGLLCRPHMARACSTSW*ECVVRQ
Trigger: TTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCA...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCTGGGCATGCCCATCTaGACGGCTCCTTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHLGMPI*TAPSAR
Trigger: CCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCAG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGCTGGGCATGCCCATCTaGACGGCTCCTTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQLGMPI*TAPSAR
Trigger: CCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCAG...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTGGGCATGCCCATCTaGACGGCTCCTTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPLGMPI*TAPSAR
Trigger: CCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCAG...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp CTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCCAGCTGGGCTGGGTGTaGGCCCTCGTGCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LFMASTNCPTMRANDQDAQLGWV*ALVQQH
Trigger: ATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCTG...GGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGCCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACT +
Preference number: 5 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRPSEPM*QQGGLT
Trigger: AGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGG...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGCCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACT +
Preference number: 5 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLPSEPM*QQGGLT
Trigger: AGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGG...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CTGAGTCCTGGCTTTCCTGACCTGCCGTCCGTTAGGGACAGGTGGAGGGGCCAACCAAGACGCCATCTCTaGGGCCCCTCAGAACCAATG +
Preference number: 5 (lower is better)
Translates to: LSPGFPDLPSVRDRWRGQPRRHL*GPSEPM
Trigger: CATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG...TTGGCCCCTCCACCTGTCCCTAACGGACGGCAGGTCAGGAAAGCCAGGACTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGGCTCCAGACCAGGCATaGGGCCAGCCGTGCCTGTTA +
Preference number: 5 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQAPDQA*GQPCLL
Trigger: TAACAGGCACGGCTGGCCCAATGCCTGGTCTGGAGC...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGCTCCAGACCAGGCATaGGGCCAGCCGTGCCTGTTA +
Preference number: 5 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHAPDQA*GQPCLL
Trigger: TAACAGGCACGGCTGGCCCAATGCCTGGTCTGGAGC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGGCCGTTAGCCCTGTTTaGCACTGGTGGATTGATCTG +
Preference number: 5 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREAVSPV*HWWIDL
Trigger: CAGATCAATCCACCAGTGCAAAACAGGGCTAACGGC...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCAGCTGCCATCTTGTaGCCTCGGACGCCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: VLFMASTNCPTMRANDQDAAAIL*PRTPLR
Trigger: GCGCAGCGGCGTCCGAGGCAACAAGATGGCAGCTGC...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp TGCAGCAAGGGGCAGAGCCACCACCACGGTGCCTTCTGCTCACTGGGGAGGGAGATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 5 (lower is better)
Translates to: CSKGQSHHHGAFCSLGREIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...CTCCCTCCCCAGTGAGCAGAAGGCACCGTGGTGGTGGCTCTGCCCCTTGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp ACAGGCCTCCAGCAGATGCTGCAGGAGCTTGGTCTCGCTGCTCCCCACGTGGCGATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 5 (lower is better)
Translates to: TGLQQMLQELGLAAPHVAIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...CGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CAA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCCTGGGCATGCCCATCTaGACGGCTCCTTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGLGMPI*TAPSAR
Trigger: CCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCAG...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp ATGAGGCTTGGTGGCAAAGATGACGAGCAGGCAGCTCTGCAGCACCTCCTGGTTCTGGGCATGCCCATCTaGACGGCTCCTTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: MRLGGKDDEQAALQHLLVLGMPI*TAPSAR
Trigger: CCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCAG...AACCAGGAGGTGCTGCAGAGCTGCCTGCTCGTCATCTTTGCCACCAAGCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CAA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCCCAAGACGCCATCTCTaGGGCCCCTCAGAACCAATG +
Preference number: 5 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLPRRHL*GPSEPM
Trigger: CATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp TGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCCCAAGACGCCATCTCTaGGGCCCCTCAGAACCAATG +
Preference number: 5 (lower is better)
Translates to: CTGGLICSGAQGDGTAGPPRRHL*GPSEPM
Trigger: CATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG...GGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCACCTCCAGAGGCTGTaGGGCGGAAGCCGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWHLQRL*GGSREL
Trigger: CAGCTCTCGGCTTCCGCCCAACAGCCTCTGGAGGTG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCATTTTGCACTGGTGGATaGATCTGCTCAGGCGCACAG +
Preference number: 5 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPFCTGG*ICSGAQ
Trigger: CTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAA...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGGCCGTTAGCCCTGTTTaGCACTGGTGGATTGATCTG +
Preference number: 5 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLAVSPV*HWWIDL
Trigger: CAGATCAATCCACCAGTGCAAAACAGGGCTAACGGC...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCAGGAGTGGCTGGCTaGGGATCTCCACCTCCCGAG +
Preference number: 5 (lower is better)
Translates to: TRHWASRACYRKFCSWPQPGVAG*GSPPPE
Trigger: CTCGGGAGGTGGAGATCCCAAGCCAGCCACTCCTGG...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CAA 90 bp AGCAGTAGGAGACCCTCATGCAGGAGGGAGGGAGCCGCAGTCCTCAGGGGAAGGATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 5 (lower is better)
Translates to: SSRRPSCRREGAAVLRGRIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...CCTTCCCCTGAGGACTGCGGCTCCCTCCCTCCTGCATGAGGGTCTCCTACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp GCCGGCCTGGCTGTAGCTGCACGGAGCCACCTGGAAAGCCAAAGGCAAGCTCCAATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 5 (lower is better)
Translates to: AGLAVAARSHLESQRQAPIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...TGGAGCTTGCCTTTGGCTTTCCAGGTGGCTCCGTGCAGCTACAGCCAGGCCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGCTGGGCATGCCCATCTaGACGGCTCCTTCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWLGMPI*TAPSAR
Trigger: CCTGGCTGAAGGAGCCGTCAAGATGGGCATGCCCAG...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACCAGCTGGGCTGGGTGTaGGCCCTCGTGCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: VLFMASTNCPTMRANDQDQLGWV*ALVQQH
Trigger: ATGCTGCTGCACGAGGGCCAACACCCAGCCCAGCTG...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCCCAAGACGCCATCTCTaGGGCCCCTCAGAACCAATG +
Preference number: 5 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAPRRHL*GPSEPM
Trigger: CATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGACCAAGACGCCATCTCTaGGGCCCCTCAGAACCAATG +
Preference number: 5 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRPRRHL*GPSEPM
Trigger: CATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGG...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCCAGACCAGGCATaGGGCCAGCCGTGCCTGTTA +
Preference number: 5 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWAPDQA*GQPCLL
Trigger: TAACAGGCACGGCTGGCCCAATGCCTGGTCTGGAGC...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCGGCCCAGCCCAGAACTaGGTTTTATCCACCTCTGGT +
Preference number: 5 (lower is better)
Translates to: PTAQPCGQMTKTPSLGPLGPAQN*VLSTSG
Trigger: ACCAGAGGTGGATAAAACCAAGTTCTGGGCTGGGCC...GAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CAA 90 bp TGGATTGATCTGCTCAGGCGCACAGGGAGATGGCACAGCAGGACCCGCCGCCCATGGGGTTTCTCCATGTaGGTCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: WIDLLRRTGRWHSRTRRPWGFSM*VRLVSN
Trigger: GTTTGAGACCAACCTGACCAACATGGAGAAACCCCA...TGGGCGGCGGGTCCTGCTGTGCCATCTCCCTGTGCGCCTGAGCAGATCAATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CAA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAACTCCGGCCGGCTTTTaGTCCGCACTCTACAAGTTC +
Preference number: 5 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSTPAGF*SALYKF
Trigger: GAACTTGTAGAGTGCGGACAAAAAGCCGGCCGGAGT...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS-3UTR CAA 90 bp GTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACTGCAGCACCTCCTGGTaGGAGTGCGTGGTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: VLFMASTNCPTMRANDQDCSTSW*ECVVRQ
Trigger: TTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCA...GTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGCCATGAACAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp AGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAACCAACTGCCCAACCATGCAGCACCTCCTGGTaGGAGTGCGTGGTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: SRACYRKFCSWPQPTAQPCSTSW*ECVVRQ
Trigger: TTGCCGGACCACGCACTCCAACCAGGAGGTGCTGCA...TGGTTGGGCAGTTGGTTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGCCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACT +
Preference number: 5 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQPSEPM*QQGGLT
Trigger: AGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGG...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATCCCTCAGAACCAATGTaGCAGCAAGGTGGGCTCACT +
Preference number: 5 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHPSEPM*QQGGLT
Trigger: AGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGG...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGAAGGGGAGAGGGTCTCTaGTGCAGACCCCATATGGCT +
Preference number: 5 (lower is better)
Translates to: VPLALFCTGGLICSGAQGRGEGL*CRPHMA
Trigger: AGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCT...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCATGGAGGGGCCAAGTCTaGCCATCAGAGGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAWRGQV*PSEASV
Trigger: CACACTGGCCTCTGATGGCAAGACTTGGCCCCTCCA...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATACTCCGGCCGGCTTTTaGTCCGCACTCTACAAGTTC +
Preference number: 5 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHTPAGF*SALYKF
Trigger: GAACTTGTAGAGTGCGGACAAAAAGCCGGCCGGAGT...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS-3UTR CAA 90 bp ACAGGCCTCCAGCAGATGCTGCAGGAGCTTGGTCTCGCTGCTCCCCACGTGGCGATTTCCCGATTGATCTaGACTCTTCTGGACCCTGAA +
Preference number: 5 (lower is better)
Translates to: TGLQQMLQELGLAAPHVAISRLI*TLLDPE
Trigger: TTCAGGGTCCAGAAGAGTCAAGATCAATCGGGAAAT...CGCCACGTGGGGAGCAGCGAGACCAAGCTCCTGCAGCATCTGCTGGAGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CAA 90 bp CCTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCAATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 5 (lower is better)
Translates to: PAPCISLCKGRRSSRRPSIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...TGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAAAGGGGAGAGGGTCTCTaGTGCAGACCCCATATGGCT +
Preference number: 5 (lower is better)
Translates to: TRHWASRACYRKFCSWPQRGEGL*CRPHMA
Trigger: AGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCT...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGAGGGGAGAGGGTCTCTaGTGCAGACCCCATATGGCT +
Preference number: 5 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWRGEGL*CRPHMA
Trigger: AGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCT...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp TGGCTTTACTGCAGGGGAGAGGGTCTCTTGTGCAGACCCCATATGGCTCGTGCCGCCGTTAGCCCTGTTTaGCACTGGTGGATTGATCTG +
Preference number: 5 (lower is better)
Translates to: WLYCRGEGLLCRPHMARAAVSPV*HWWIDL
Trigger: CAGATCAATCCACCAGTGCAAAACAGGGCTAACGGC...GGCACGAGCCATATGGGGTCTGCACAAGAGACCCTCTCCCCTGCAGTAAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATGCCGTTAGCCCTGTTTaGCACTGGTGGATTGATCTG +
Preference number: 5 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHAVSPV*HWWIDL
Trigger: CAGATCAATCCACCAGTGCAAAACAGGGCTAACGGC...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp GCCTCAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGGCCCAGCCCAGAACTaGGTTTTATCCACCTCTGGT +
Preference number: 5 (lower is better)
Translates to: ASTNCPTMRANDQDAISWGPAQN*VLSTSG
Trigger: ACCAGAGGTGGATAAAACCAAGTTCTGGGCTGGGCC...CCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CAA 90 bp GTGCCGTTAGCCCTGTTTTGCACTGGTGGATTGATCTGCTCAGGCGCACAGGGATGCAGTGGCATGATCTaGGCTCTCTGCAATCTCCGC +
Preference number: 5 (lower is better)
Translates to: VPLALFCTGGLICSGAQGCSGMI*ALCNLR
Trigger: GCGGAGATTGCAGAGAGCCAAGATCATGCCACTGCA...TCCCTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAACAGGGCTAACGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CAA 90 bp TTGCCATCAGAGGCCAGTGTGGTGGTGCCAGAGCTACGGGGTATTCCAGGACCCCTCTTGATCCAACGCTaGGATCAGGAATACCCCCTA +
Preference number: 5 (lower is better)
Translates to: LPSEASVVVPELRGIPGPLLIQR*DQEYPL
Trigger: TAGGGGGTATTCCTGATCCAAGCGTTGGATCAAGAG...GGGTCCTGGAATACCCCGTAGCTCTGGCACCACCACACTGGCCTCTGATGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CAA 90 bp ACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 5 (lower is better)
Translates to: TAQPCGQMTKTPSLGPLRIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...TCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp CTGCCCCCTGCATTTCCCTGTGCAAGGGGAGAAGGAGCAGTAGGAGACCCTCATATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 5 (lower is better)
Translates to: LPPAFPCARGEGAVGDPHIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...ATGAGGGTCTCCTACTGCTCCTTCTCCCCTTGCACAGGGAAATGCAGGGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000220966.10
ENST00000377579.7
ENST00000433751.5
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000633357.1
ENST00000634183.1
CDS-3UTR CAA 90 bp AGCCACGGACACCAAGATGTGTTCAGTGGTGACCACAGGAGCCACCTCTGCCAGATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 5 (lower is better)
Translates to: SHGHQDVFSGDHRSHLCQIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...CTGGCAGAGGTGGCTCCTGTGGTCACCACTGAACACATCTTGGTGTCCGTGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS-3UTR CAA 90 bp GGAAAGAGGGAGCCTGTATCCAGACTAAAGCCAGGGGTCTGCATGTGTCCTGGCTTTTGCACTGGTGGATaGATCTGCTCAGGCGCACAG +
Preference number: 5 (lower is better)
Translates to: GKREPVSRLKPGVCMCPGFCTGG*ICSGAQ
Trigger: CTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAA...GCCAGGACACATGCAGACCCCTGGCTTTAGTCTGGATACAGGCTCCCTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp CAACCAACTGCCCAACCATGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCTGGGGTTTCTCCATGTaGGTCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: QPTAQPCGQMTKTPSLGPWGFSM*VRLVSN
Trigger: GTTTGAGACCAACCTGACCAACATGGAGAAACCCCA...GGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCATGGTTGGGCAGTTGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CAA 90 bp ACCAGGCATTGGGCCAGCCGTGCCTGTTACCGTAAGTTCTGTTCATGGCCTCAATGCAGTGGCATGATCTaGGCTCTCTGCAATCTCCGC +
Preference number: 5 (lower is better)
Translates to: TRHWASRACYRKFCSWPQCSGMI*ALCNLR
Trigger: GCGGAGATTGCAGAGAGCCAAGATCATGCCACTGCA...TTGAGGCCATGAACAGAACTTACGGTAACAGGCACGGCTGGCCCAATGCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
CDS-3UTR CAA 90 bp CACGGGGCAGGAGGGCCCAGAGCCACCTGGCCACTTGTCAGGAGCTTAGGATTGCCATCGTTTTCTGTCTaGAAGAACAGTTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: HGAGGPRATWPLVRSLGLPSFSV*KNSFHL
Trigger: CAGGTGAAAACTGTTCTTCAAGACAGAAAACGATGG...CAATCCTAAGCTCCTGACAAGTGGCCAGGTGGCTCTGGGCCCTCCTGCCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000495276.6
CDS-3UTR CAA 90 bp TGCGGGCAAATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCATTTTGCACTGGTGGATaGATCTGCTCAGGCGCACAG +
Preference number: 5 (lower is better)
Translates to: CGQMTKTPSLGPLRTNVAFCTGG*ICSGAQ
Trigger: CTGTGCGCCTGAGCAGATCAATCCACCAGTGCAAAA...TGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCATTTGCCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000220966.10
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
CDS-3UTR CAA 90 bp ATGACCAAGACGCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGT +
Preference number: 5 (lower is better)
Translates to: MTKTPSLGPLRTNVAARWIGSCL*VHWPVC
Trigger: ACATACTGGCCAGTGCACCAACAGACAGGAACCTAT...CCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGCGTCTTGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000220966.10
ENST00000447926.6
ENST00000495276.6
ENST00000616663.2
ENST00000632107.1
ENST00000633357.1
CDS-3UTR CAA 90 bp GCCATCTCTTGGGCCCCTCAGAACCAATGTTGCAGCAAGGTGGGCTCACTGCAGATTTCCCGATTGATCTaGACTCTTCTGGACCCTGAA +
Preference number: 5 (lower is better)
Translates to: AISWAPQNQCCSKVGSLQISRLI*TLLDPE
Trigger: TTCAGGGTCCAGAAGAGTCAAGATCAATCGGGAAAT...CTGCAGTGAGCCCACCTTGCTGCAACATTGGTTCTGAGGGGCCCAAGAGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447926.6
ENST00000633357.1
CDS CCA 90 bp AACCCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTTCCACTTTTCTGGGACGGCACACTC +
Preference number: 5 (lower is better)
Translates to: NPELESDIGSCLLVH*PVCAELPLFWDGTL
Trigger: GAGTGTGCCGTCCCAGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS CCA 90 bp AACCCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTTCCACTTTTCCTCATTGGTGAGGAC +
Preference number: 5 (lower is better)
Translates to: NPELESDIGSCLLVH*PVCAELPLFLIGED
Trigger: GTCCTCACCAATGAGGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462036.5
ENST00000633497.1
CDS GCA 72 bp CACGAAGCCCACGCGCCGCGGAGACGGCTCCGCAGCTaGCATCTTGTTGCCTCGGACGCCGCTGCGCTCACC +
Preference number: 6 (lower is better)
Translates to: HEAHAPRRRLRS*HLVASDAAALT
Trigger: GGTGAGCGCAGCGGCGTCCGAGGCAACAAGATGGCAGCTGCGGAGCCGTCTCCGCGGCGCGTGGGCTTCGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220966.10
ENST00000616663.2
CDS CCA 72 bp GCAGGGGCCTCAGGAAAGGTCCACGTCAGCTCGCGGTaGGCTCCAGCGTCTGCCTCCCAGGTACAGCACCAG +
Preference number: 6 (lower is better)
Translates to: AGASGKVHVSSR*APASASQVQHQ
Trigger: CTGGTGCTGTACCTGGGAGGCAGACGCTGGAGCCCACCGCGAGCTGACGTGGACCTTTCCTGAGGCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482616.1
ENST00000632135.1
CDS CCA 72 bp TGCCTGCCGCCCAAGCCTGGCCAGCAGAGCCTATACTaGGACCAAGGCCTTAGCCCAAGGGACACTCACCTC +
Preference number: 6 (lower is better)
Translates to: CLPPKPGQQSLY*DQGLSPRDTHL
Trigger: GAGGTGAGTGTCCCTTGGGCTAAGGCCTTGGTCCCAGTATAGGCTCTGCTGGCCAGGCTTGGGCGGCAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482616.1
ENST00000632135.1
CDS CAA 90 bp TGCCTCCCAGGTACAGCACCAGGAGGGAACCCTAAATCCAGCCACTaGATCCAGGTGGGCCACACGGCCACCTCTCAGGCTCTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: CLPGTAPGGNPKSSH*IQVGHTATSQALWG
Trigger: CCCCCAGAGAGCCTGAGAGGTGGCCGTGTGGCCCACCTGGATCAAGTGGCTGGATTTAGGGTTCCCTCCTGGTGCTGTACCTGGGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482616.1
ENST00000632135.1
CDS GCA 72 bp AAAGGTCCACGTCAGCTCGCGGTGGGCTCCAGCGTCTaGCTCCCAGGTACAGCACCAGGAGGGAACCCTAAA +
Preference number: 6 (lower is better)
Translates to: KGPRQLAVGSSV*LPGTAPGGNPK
Trigger: TTTAGGGTTCCCTCCTGGTGCTGTACCTGGGAGGCAGACGCTGGAGCCCACCGCGAGCTGACGTGGACCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482616.1
ENST00000632135.1
CDS TCA 72 bp GTACAGCACCAGGAGGGAACCCTAAATCCAGCCACTTaGTCCAGGTGGGCCACACGGCCACCTCTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: VQHQEGTLNPAT*SRWATRPPLRL
Trigger: GAGCCTGAGAGGTGGCCGTGTGGCCCACCTGGATCAAGTGGCTGGATTTAGGGTTCCCTCCTGGTGCTGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482616.1
ENST00000632135.1
CDS CAA 72 bp GGTACAGCACCAGGAGGGAACCCTAAATCCAGCCACTaGATCCAGGTGGGCCACACGGCCACCTCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: GTAPGGNPKSSH*IQVGHTATSQA
Trigger: AGCCTGAGAGGTGGCCGTGTGGCCCACCTGGATCAAGTGGCTGGATTTAGGGTTCCCTCCTGGTGCTGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000482616.1
ENST00000632135.1
CDS CAA 72 bp TCCACTTTTCTGGGACGGCACACTCCGGCCGGCTTTTaGTCCGCACTCTACAAGTTCGCAAGGCGCGGGAAC +
Preference number: 6 (lower is better)
Translates to: STFLGRHTPAGF*SALYKFARRGN
Trigger: GTTCCCGCGCCTTGCGAACTTGTAGAGTGCGGACAAAAAGCCGGCCGGAGTGTGCCGTCCCAGAAAAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS TCA 72 bp AGGTTCCTGTCTGTTGGTGCACTGGCCAGTATGTGCTaGGCTTCCACTTTTCTGGGACGGCACACTCCGGCC +
Preference number: 6 (lower is better)
Translates to: RFLSVGALASMC*ASTFLGRHTPA
Trigger: GGCCGGAGTGTGCCGTCCCAGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS CAA 90 bp TGGTCCGGCAACCCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGTGCTGAGCTTCCACTTTTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: WSGNPELESDIGSCL*VHWPVCAELPLFLL
Trigger: GAGCAGGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGGGTTGCCGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000482616.1
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000632135.1
CDS CAA 90 bp TGGTCCGGCAACCCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGTGCTGAGCTTCCACTTTTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: WSGNPELESDIGSCL*VHWPVCAELPLFWD
Trigger: GTCCCAGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGGGTTGCCGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377579.7
ENST00000634183.1
CDS CAA 90 bp TGGTCCGGCAACCCAGAGCTTGAAAGTGACATAGGTTCCTGTCTGTaGGTGCACTGGCCAGTATGTGCTGAGCTTCCACTTTTCCTCATT +
Preference number: 6 (lower is better)
Translates to: WSGNPELESDIGSCL*VHWPVCAELPLFLI
Trigger: AATGAGGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAGCTCTGGGTTGCCGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462036.5
ENST00000633497.1
CDS CCA 72 bp CTTGAAAGTGACATAGGTTCCTGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTTCCACTTTTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: LESDIGSCLLVH*PVCAELPLFLL
Trigger: GAGCAGGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000220966.10
ENST00000433751.5
ENST00000482616.1
ENST00000495276.6
ENST00000616663.2
ENST00000631620.1
ENST00000632107.1
ENST00000632135.1
CDS CCA 72 bp CTTGAAAGTGACATAGGTTCCTGTCTGTTGGTGCACTaGCCAGTATGTGCTGAGCTTCCACTTTTCCTCATT +
Preference number: 6 (lower is better)
Translates to: LESDIGSCLLVH*PVCAELPLFLI
Trigger: AATGAGGAAAAGTGGAAGCTCAGCACATACTGGCCAGTGCACCAACAGACAGGAACCTATGTCACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462036.5
ENST00000633497.1