Pregenerated sensors for PWAR5 (Homo sapiens)
Ensembl gene IDs: ENSG00000279192Ensembl transcript IDs: ENST00000624480.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 72 bp | CACACACACACACACACGTGCACACACGCACACACGTaGACACACGCACATACACGTGTCATCTCTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: HTHTHTCTHAHT*THAHTRVISSR Trigger: TCTGGAAGAGATGACACGTGTATGTGCGTGTGTGCACGTGTGTGCGTGTGTGCACGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS GCA 72 bp | CCTACCACTCCACCAAAACACACACACACACACACGTaGACACACGCACACACGTGCACACACGCACATACA | + |
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Preference number: 6 (lower is better) Translates to: PTTPPKHTHTHT*THAHTCTHAHT Trigger: TGTATGTGCGTGTGTGCACGTGTGTGCGTGTGTGCACGTGTGTGTGTGTGTGTGTTTTGGTGGAGTGGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS TCA 72 bp | TTGGCACATGCTTGTAATCCCAGCTACTCTGGAGGCTaGGACAAGAAGTGCTTGAATGCAAGAGGCGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: LAHACNPSYSGG*DKKCLNARGGG Trigger: ACCTCCGCCTCTTGCATTCAAGCACTTCTTGTCTCAGCCTCCAGAGTAGCTGGGATTACAAGCATGTGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS GCA 72 bp | GGGCTGGGCCAGCAACTACCACTGCATTCTCTAAGTTaGACCAAACATCTGAAGGTAAAAGACCCCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: GLGQQLPLHSLS*TKHLKVKDPLS Trigger: TGACAGGGGGTCTTTTACCTTCAGATGTTTGGTGCAACTTAGAGAATGCAGTGGTAGTTGCTGGCCCAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS CAA 72 bp | TGGGCTGGGCCAGCAACTACCACTGCATTCTCTAAGTaGCACCAAACATCTGAAGGTAAAAGACCCCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: WAGPATTTAFSK*HQTSEGKRPPV Trigger: GACAGGGGGTCTTTTACCTTCAGATGTTTGGTGCAACTTAGAGAATGCAGTGGTAGTTGCTGGCCCAGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS CCA 72 bp | TCATCTGTGAAGTATCACCCCACAAATGAGGTTGTTTaGATGGGCTGGGCCAGCAACTACCACTGCATTCTC | + |
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Preference number: 6 (lower is better) Translates to: SSVKYHPTNEVV*MGWASNYHCIL Trigger: GAGAATGCAGTGGTAGTTGCTGGCCCAGCCCATCCAAACAACCTCATTTGTGGGGTGATACTTCACAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS TCA 72 bp | AATGGAGAAGCTGCCTCAGTGACAGAAACATGCTCATaGAACTTTCATATAGGGTTGGAACCGGGTGATGCA | + |
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Preference number: 6 (lower is better) Translates to: NGEAASVTETCS*NFHIGLEPGDA Trigger: TGCATCACCCGGTTCCAACCCTATATGAAAGTTTCATGAGCATGTTTCTGTCACTGAGGCAGCTTCTCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS CAA 72 bp | GATCATGAATTAGCAAGGCTGGACCTCACGCTCCCTTaGCAGGAATGGAAAGTGTCATCCAATTCAAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: DHELARLDLTLP*QEWKVSSNSRN Trigger: ATTTCTTGAATTGGATGACACTTTCCATTCCTGCAAAGGGAGCGTGAGGTCCAGCCTTGCTAATTCATGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS CCA 72 bp | ACTAAAGGATCTAGAACCAACTTCCTTGTATTGCACTaGAAAAACCTACAACACGCCATTATCCTTAACCTG | + |
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Preference number: 6 (lower is better) Translates to: TKGSRTNFLVLH*KNLQHAIILNL Trigger: CAGGTTAAGGATAATGGCGTGTTGTAGGTTTTTCCAGTGCAATACAAGGAAGTTGGTTCTAGATCCTTTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS GCA 72 bp | ACTGTACTAAAGGATCTAGAACCAACTTCCTTGTATTaGACTGGAAAAACCTACAACACGCCATTATCCTTA | + |
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Preference number: 6 (lower is better) Translates to: TVLKDLEPTSLY*TGKTYNTPLSL Trigger: TAAGGATAATGGCGTGTTGTAGGTTTTTCCAGTGCAATACAAGGAAGTTGGTTCTAGATCCTTTAGTACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS CAA 72 bp | AACTGTACTAAAGGATCTAGAACCAACTTCCTTGTATaGCACTGGAAAAACCTACAACACGCCATTATCCTT | + |
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Preference number: 6 (lower is better) Translates to: NCTKGSRTNFLV*HWKNLQHAIIL Trigger: AAGGATAATGGCGTGTTGTAGGTTTTTCCAGTGCAATACAAGGAAGTTGGTTCTAGATCCTTTAGTACAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS CAA 72 bp | ACATTAACTGTACTAAAGGATCTAGAACCAACTTCCTaGTATTGCACTGGAAAAACCTACAACACGCCATTA | + |
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Preference number: 6 (lower is better) Translates to: TLTVLKDLEPTS*YCTGKTYNTPL Trigger: TAATGGCGTGTTGTAGGTTTTTCCAGTGCAATACAAGGAAGTTGGTTCTAGATCCTTTAGTACAGTTAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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| CDS CAA 72 bp | CAGGAACATGTTCCAACCACATTAAAATTTGCTTATTaGTTTTCCTCCTACTACTCATTAATGCAATTTGCC | + |
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Preference number: 6 (lower is better) Translates to: QEHVPTTLKFAY*FSSYYSLMQFA Trigger: GGCAAATTGCATTAATGAGTAGTAGGAGGAAAACAAATAAGCAAATTTTAATGTGGTTGGAACATGTTCCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624480.1 |
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