Pregenerated sensors for PWAR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000279050Ensembl transcript IDs: ENST00000624188.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATCAGTGCAGAGCATGTTGAAGAGCGTTCCCTGTGGTCTTTGCCATaGCTAGTTATGGCTGGCCTCTACACTAGCTATGGCTCCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: ISAEHVEERSLWSLP*LVMAGLYTSYGSLC Trigger: GCAGAGGGAGCCATAGCTAGTGTAGAGGCCAGCCATAACTAGCCATGGCAAAGACCACAGGGAACGCTCTTCAACATGCTCTGCACTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS TCA 90 bp | CTGACATTTCTCCACACCAGGGTAGAGGATCAGTGCAGAGCATGTTaGAGAGCGTTCCCTGTGGTCTTTGCCATGGCTAGTTATGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LTFLHTRVEDQCRAC*RAFPVVFAMASYGW Trigger: CCAGCCATAACTAGCCATGGCAAAGACCACAGGGAACGCTCTTCAACATGCTCTGCACTGATCCTCTACCCTGGTGTGGAGAAATGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS GCA 90 bp | ATGCCAGGTATTGTACCAGAAACAAGAACACCACCCTCTCCTCGCTaGTTTCGTGGAACTCAGCATGGTGTTGACAGCCAGTGTGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: MPGIVPETRTPPSPR*FRGTQHGVDSQCEA Trigger: AGCCTCACACTGGCTGTCAACACCATGCTGAGTTCCACGAAAGCAGCGAGGAGAGGGTGGTGTTCTTGTTTCTGGTACAATACCTGGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS TCA 90 bp | AGCAGCTCTGCCACTAGGTCAATATATGTCATGAGGTACCTTTCATaGTCTCTAAATGTTGGAGTTGCTCCTCCATTAAATGGGCCTAAG | + |
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Preference number: 5 (lower is better) Translates to: SSSATRSIYVMRYLS*SLNVGVAPPLNGPK Trigger: CTTAGGCCCATTTAATGGAGGAGCAACTCCAACATTTAGAGATCATGAAAGGTACCTCATGACATATATTGACCTAGTGGCAGAGCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS GCA 90 bp | ACAATAAAGGGTAACGACGGGACAGGATTATCACATTTACTTCTGTaGCTGTCATTCAGTACAGAACATAAATCAGCCCTGAATGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: TIKGNDGTGLSHLLL*LSFSTEHKSALNGK Trigger: CTTCCCATTCAGGGCTGATTTATGTTCTGTACTGAATGACAGGCACAGAAGTAAATGTGATAATCCTGTCCCGTCGTTACCCTTTATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS TCA 90 bp | TGTACCTATATAGATGTATATGAGAATGATGACACAGATACAGTATaGAGTGTGTGGCTGGGACACAGCAAGACCACAATAAAGGGTAAC | + |
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Preference number: 5 (lower is better) Translates to: CTYIDVYENDDTDTV*SVWLGHSKTTIKGN Trigger: GTTACCCTTTATTGTGGTCTTGCTGTGTCCCAGCCACACACTTCATACTGTATCTGTGTCATCATTCTCATATACATCTATATAGGTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS TCA 72 bp | CTCCACACCAGGGTAGAGGATCAGTGCAGAGCATGTTaGAGAGCGTTCCCTGTGGTCTTTGCCATGGCTAGT | + |
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Preference number: 6 (lower is better) Translates to: LHTRVEDQCRAC*RAFPVVFAMAS Trigger: ACTAGCCATGGCAAAGACCACAGGGAACGCTCTTCAACATGCTCTGCACTGATCCTCTACCCTGGTGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS CCA 72 bp | GAGCATGTTGAAGAGCGTTCCCTGTGGTCTTTGCCATaGCTAGTTATGGCTGGCCTCTACACTAGCTATGGC | + |
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Preference number: 6 (lower is better) Translates to: EHVEERSLWSLP*LVMAGLYTSYG Trigger: GCCATAGCTAGTGTAGAGGCCAGCCATAACTAGCCATGGCAAAGACCACAGGGAACGCTCTTCAACATGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS CCA 72 bp | AGGATCAGTGCAGAGCATGTTGAAGAGCGTTCCCTGTaGTCTTTGCCATGGCTAGTTATGGCTGGCCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: RISAEHVEERSL*SLPWLVMAGLY Trigger: GTAGAGGCCAGCCATAACTAGCCATGGCAAAGACCACAGGGAACGCTCTTCAACATGCTCTGCACTGATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS GCA 72 bp | ATTGTACCAGAAACAAGAACACCACCCTCTCCTCGCTaGTTTCGTGGAACTCAGCATGGTGTTGACAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: IVPETRTPPSPR*FRGTQHGVDSQ Trigger: CTGGCTGTCAACACCATGCTGAGTTCCACGAAAGCAGCGAGGAGAGGGTGGTGTTCTTGTTTCTGGTACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS CCA 72 bp | GCCCACATTCCACATGGACCAAGGCAGGCGTTCCACTaGGGAGCTGGCAATTATTTTGAGATTATACCGAAG | + |
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Preference number: 6 (lower is better) Translates to: AHIPHGPRQAFH*GAGNYFEIIPK Trigger: CTTCGGTATAATCTCAAAATAATTGCCAGCTCCCCAGTGGAACGCCTGCCTTGGTCCATGTGGAATGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS TCA 72 bp | GGCCCACCCAGGACACTAGTAACTGCTTCTTCAAGTTaGGTTGCTAATACTGCATTTTTATGCCTGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GPPRTLVTASSS*VANTAFLCLRL Trigger: GAGCCTCAGGCATAAAAATGCAGTATTAGCAACTCAACTTGAAGAAGCAGTTACTAGTGTCCTGGGTGGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS CCA 72 bp | CAGTTAAATATAACAGGCAGTTGGTACTATTTTCCCTaGGGCCCACCCAGGACACTAGTAACTGCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QLNITGSWYYFP*GPPRTLVTASS Trigger: TGAAGAAGCAGTTACTAGTGTCCTGGGTGGGCCCCAGGGAAAATAGTACCAACTGCCTGTTATATTTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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| CDS GCA 72 bp | GGTAACGACGGGACAGGATTATCACATTTACTTCTGTaGCTGTCATTCAGTACAGAACATAAATCAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GNDGTGLSHLLL*LSFSTEHKSAL Trigger: CAGGGCTGATTTATGTTCTGTACTGAATGACAGGCACAGAAGTAAATGTGATAATCCTGTCCCGTCGTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624188.1 |
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