Pregenerated sensors for PURG (Homo sapiens)
Ensembl gene IDs: ENSG00000172733Ensembl transcript IDs: ENST00000339382.3, ENST00000475541.1, ENST00000475541.2, ENST00000523392.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATGTGTGCAGTTAGCATCCACAAAAGCACCATTGGGTATGGGAGAATTAGCACCTTGGAACATAAAAACTaGAGTAGTACGTGGTATGGT | + |
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Preference number: 2 (lower is better) Translates to: MCAVSIHKSTIGYGRISTLEHKN*SSTWYG Trigger: ACCATACCACGTACTACTTCAGTTTTTATGTTCCAA...GGTGCTAATTCTCCCATACCCAATGGTGCTTTTGTGGATGCTAACTGCACACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTGCAGTTAGCATCCACAAAAGCACCATTGGGTATGGGAGAATTAGCACCACAAAACCCAAAAACTaGATAGAGTCGAAAGGTACT | + |
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Preference number: 2 (lower is better) Translates to: MCAVSIHKSTIGYGRISTTKPKN*IESKGT Trigger: AGTACCTTTCGACTCTATCCAGTTTTTGGGTTTTGT...GGTGCTAATTCTCCCATACCCAATGGTGCTTTTGTGGATGCTAACTGCACACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| 3UTR CAA 90 bp | GAAATTATTCAACATAAGATCAGTTTGGAAATGATGCCAGTGGTGTaGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: EIIQHKISLEMMPVV*ILVFPSVEECQVLR Trigger: CCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGGCATCATTTCCAAACTGATCTTATGTTGAATAATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| 3UTR CAA 90 bp | GAAAGGTACTTCAATGTGGTGGAAATTATTCAACATAAGATCAGTTaGGAAATGATGCCAGTGGTGTTGATACTTGTCTTCCCTTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: ERYFNVVEIIQHKIS*EMMPVVLILVFPSV Trigger: CACGGAAGGGAAGACAAGTATCAACACCACTGGCATCATTTCCAAACTGATCTTATGTTGAATAATTTCCACCACATTGAAGTACCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| 3UTR TCA 72 bp | TACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTaGGGCCTTACATTCATGATGAACTTCAGTTCATTT | + |
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Preference number: 3 (lower is better) Translates to: YLSSLPWRNVKY*GLTFMMNFSSF Trigger: AAATGAACTGAAGTTCATCATGAATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| 3UTR-3UTR CAA 90 bp | TTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAACCAACATAAGATCAGTTaGGAAATGATGCCAGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: FQIYMSLYLKADKWWFENQHKIS*EMMPVV Trigger: CACCACTGGCATCATTTCCAAACTGATCTTATGTTG...GTTTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| 3UTR-3UTR CAA 90 bp | TATTTATATATACCGGAGGTCAATTTCTGTTTCTGTGGTAACTGCCCTACAGGTACATTTTGTGCTGATTaGCATACTTCAATAGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: YLYIPEVNFCFCGNCPTGTFCAD*HTSIVW Trigger: CCAGACTATTGAAGTATGCAAATCAGCACAAAATGT...ACCTGTAGGGCAGTTACCACAGAAACAGAAATTGACCTCCGGTATATATAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475541.1 |
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| 3UTR-3UTR CAA 90 bp | TATTTATATATACCGGAGGTCAATTTCTGTTTCTGTGGTAACTGCCCTACAGGTAGAATTGAAATACTTTaGGGGGAAAGTCACACTTCT | + |
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Preference number: 3 (lower is better) Translates to: YLYIPEVNFCFCGNCPTGRIEIL*GESHTS Trigger: AGAAGTGTGACTTTCCCCCAAAAGTATTTCAATTCT...ACCTGTAGGGCAGTTACCACAGAAACAGAAATTGACCTCCGGTATATATAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475541.1 |
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| CDS-3UTR TCA 90 bp | CCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCTGATTAGGGGTGGCTaGGGCCGCGTAGTGGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PVVLILVFPSVEECQVLRLIRGG*GRVVGV Trigger: TACCCCCACTACGCGGCCTCAGCCACCCCTAATCAG...CCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | CCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCTGTGGCCATGCTCTTaGCGGTGGCCTTTCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PVVLILVFPSVEECQVLRLWPCS*RWPFRP Trigger: GGGCCTGAAAGGCCACCGGCAAGAGCATGGCCACAG...CCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | GATCAGTTTGGAAATGATGCCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGGACCCCACCGAGACTaGTGGGGAGGGTGCCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: DQFGNDASGVDTCLPFRGGPHRD*WGGCRV Trigger: CACTCGGCACCCTCCCCACCAGTCTCGGTGGGGTCC...TCCACGGAAGGGAAGACAAGTATCAACACCACTGGCATCATTTCCAAACTGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | AATGATGCCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTCTACACTTCCCGAGGTaGTCAGCGGCAGCGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: NDASGVDTCLPFRGGMSSLHFPR*SAAARA Trigger: GGCCCTCGCTGCCGCTGAGCACCTCGGGAAGTGTAG...ACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGGCATCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | AATGATGCCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTCCCCACCGAGACTGGTaGGGAGGGTGCCGAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: NDASGVDTCLPFRGGMSSPHRDW*GGCRVL Trigger: AAGCACTCGGCACCCTCCCCACCAGTCTCGGTGGGG...ACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGGCATCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | TTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCCTTACATTCCTCAGTGCACTCTCTaGCTGAAGCCCGGCGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: LILVFPSVEECQVLRPYIPQCTL*LKPGAW Trigger: CCACGCGCCGGGCTTCAGTCAGAGAGTGCACTGAGG...AATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | GATCAGTTTGGAAATGATGCCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGTGGGGGAGGGGTGTTaGGAACAATCGCAGACGCCC | + |
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Preference number: 4 (lower is better) Translates to: DQFGNDASGVDTCLPFRGVGEGC*EQSQTP Trigger: GGGCGTCTGCGATTGTTCTCAACACCCCTCCCCCAC...TCCACGGAAGGGAAGACAAGTATCAACACCACTGGCATCATTTCCAAACTGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | CCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCGCCTCCCCTTCGCCTaGCTCTTTCCATCTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: PVVLILVFPSVEECQVLRRLPFA*LFPSSA Trigger: AGCTGAAGATGGAAAGAGCCAGGCGAAGGGGAGGCG...CCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | GAACAATACGGGACAAAAACCACCTTGCACCCTGTTAACACTAAAGCAGTTACAAGTGCACTCTCTGACTaGAGCCCGGCGCGTGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: EQYGTKTTLHPVNTKAVTSALSD*SPARGV Trigger: CACCCCACGCGCCGGGCTTCAGTCAGAGAGTGCACT...TGTAACTGCTTTAGTGTTAACAGGGTGCAAGGTGGTTTTTGTCCCGTATTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | ATGTGTGCAGTTAGCATCCACAAAAGCACCATTGGGTATGGGAGAATTAGCACCCTGCCCAGCCGCACCTaGGAAGAGACTACACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: MCAVSIHKSTIGYGRISTLPSRT*EETTLP Trigger: GGGAAGTGTAGTCTCTTCGCAGGTGCGGCTGGGCAG...GGTGCTAATTCTCCCATACCCAATGGTGCTTTTGTGGATGCTAACTGCACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | TTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAACAGCTCTCGGCCCCTCTaGTGCAGCCGCCGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: FQIYMSLYLKADKWWFENSSRPL*CSRRSR Trigger: GCGGCTGCGGCGGCTGCAGCAGAGGGGCCGAGAGCT...GTTTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | TTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAACCACCGCCGCCGCCGATaGCCTTCACGACCACCGCCG | + |
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Preference number: 4 (lower is better) Translates to: FQIYMSLYLKADKWWFENHRRRR*PSRPPP Trigger: CGGCGGTGGTCGTGAAGGGCATCGGCGGCGGCGGTG...GTTTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | ATGTGTGCAGTTAGCATCCACAAAAGCACCATTGGGTATGGGAGAATTAGCACCCACTCACATCATCTCTaGCATCACCGCCGCCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: MCAVSIHKSTIGYGRISTHSHHL*HHRRRR Trigger: TCGGCGGCGGCGGTGATGGCAGAGATGATGTGAGTG...GGTGCTAATTCTCCCATACCCAATGGTGCTTTTGTGGATGCTAACTGCACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | TTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCCTTACATTCTCCTGGATTTCGGCTaGGCCCCCGGCCTGATTAGG | + |
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Preference number: 4 (lower is better) Translates to: LILVFPSVEECQVLRPYILLDFG*APGLIR Trigger: CCTAATCAGGCCGGGGGCGCAGCCGAAATCCAGGAG...AATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | TTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCCTTACATTGGGGAGGGTGCCGAGTaGTTCTGCCTCCTTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LILVFPSVEECQVLRPYIGEGAE*FCLLLE Trigger: CTCCAGAAGGAGGCAGAAGCACTCGGCACCCTCCCC...AATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | CCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGAGGGGACTGGACAGGTaGGAAGATGGGAATGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: PVVLILVFPSVEECQVLRRGLDR*EDGNED Trigger: GTCCTCATTCCCATCTTCCCACCTGTCCAGTCCCCT...CCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | TTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCCTTACATTGTCCTTCAGCTCCGCTaGCACAGACAGGGAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LILVFPSVEECQVLRPYIVLQLR*HRQGEG Trigger: ACCCTCTCCCTGTCTGTGGCAGCGGAGCTGAAGGAC...AATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | GAACAATACGGGACAAAAACCACCTTGCACCCTGTTAACACTAAAGCAGTTACAGACTGGTGGGGAGGGTaGCGAGTGCTTCTGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: EQYGTKTTLHPVNTKAVTDWWGG*RVLLPP Trigger: AGGAGGCAGAAGCACTCGGCACCCTCCCCACCAGTC...TGTAACTGCTTTAGTGTTAACAGGGTGCAAGGTGGTTTTTGTCCCGTATTGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | ATTCATGATGAACTTCAGTTCATTTCTTTCACCGAATGCCTTTATTCTGAGGTGCTGAAGCCCGGCGCGTaGGGTGCAGCGGGAGTGCGA | + |
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Preference number: 4 (lower is better) Translates to: IHDELQFISFTECLYSEVLKPGA*GAAGVR Trigger: TCGCACTCCCGCTGCACCCCACGCGCCGGGCTTCAG...CACCTCAGAATAAAGGCATTCGGTGAAAGAAATGAACTGAAGTTCATCATGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | GATCAGTTTGGAAATGATGCCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGACCTTGCTCTTTGCTGTaGCCATGCTCTTGCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: DQFGNDASGVDTCLPFRGPCSLL*PCSCRW Trigger: CCACCGGCAAGAGCATGGCCACAGCAAAGAGCAAGG...TCCACGGAAGGGAAGACAAGTATCAACACCACTGGCATCATTTCCAAACTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | ATTTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAACCCGGCACAGCCTGCTaGGGGGAAGAGGGGGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: IFKSICLSTSRLTNGGLKPGTAC*GEEGVS Trigger: GGAGACCCCCTCTTCCCCTCAGCAGGCTGTGCCGGG...TTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | ATGTGTGCAGTTAGCATCCACAAAAGCACCATTGGGTATGGGAGAATTAGCACCCTCCTTCTGGAGCCTTaGTCTTTGCTGTGGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: MCAVSIHKSTIGYGRISTLLLEP*SLLWPC Trigger: GCATGGCCACAGCAAAGAGCAAGGCTCCAGAAGGAG...GGTGCTAATTCTCCCATACCCAATGGTGCTTTTGTGGATGCTAACTGCACACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGTTTTAAACTTCAAGCTTTGTTCAGCATGTGTGCAGTTAGCATCCACATTGGAGGCCAGCTCCTaGATTTCGGCTGCGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: RKVLNFKLCSACVQLASTLEASS*ISAAPP Trigger: CGGGGGCGCAGCCGAAATCCAGGAGCTGGCCTCCAA...TGTGGATGCTAACTGCACACATGCTGAACAAAGCTTGAAGTTTAAAACTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGTTTTAAACTTCAAGCTTTGTTCAGCATGTGTGCAGTTAGCATCCACACCATGCTCTTGCCGGTaGCCTTTCAGGCCCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RKVLNFKLCSACVQLASTPCSCR*PFRPRW Trigger: CCACCTGGGCCTGAAAGGCCACCGGCAAGAGCATGG...TGTGGATGCTAACTGCACACATGCTGAACAAAGCTTGAAGTTTAAAACTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | CCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGTTTTATTGTCCACTCTaGAAGAAGTCCCCTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PVVLILVFPSVEECQVLRFYCPL*KKSPLG Trigger: TCCCAGAGGGGACTTCTTTCAGAGTGGACAATAAAA...CCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | TTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCCTTACATTTCAGTTTACTCTTTCTaGTGTTGTCCTGCCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LILVFPSVEECQVLRPYISVYSF*CCPAGL Trigger: GAGGCCGGCAGGACAACATCAGAAAGAGTAAACTGA...AATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | GATCAGTTTGGAAATGATGCCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGACAAAATAACCTATCATaGCAGTCCCCCGCATCATGG | + |
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Preference number: 4 (lower is better) Translates to: DQFGNDASGVDTCLPFRGQNNLS*QSPASW Trigger: CCATGATGCGGGGGACTGGCATGATAGGTTATTTTG...TCCACGGAAGGGAAGACAAGTATCAACACCACTGGCATCATTTCCAAACTGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | AAACCCAAAAACTGGATAGAGTCGAAAGGTACTTCAATGTGGTGGAAATTATTCGGAGTGCGAGGGGACTaGACAGGTGGGAAGATGGGA | + |
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Preference number: 4 (lower is better) Translates to: KPKNWIESKGTSMWWKLFGVRGD*TGGKMG Trigger: TCCCATCTTCCCACCTGTCCAGTCCCCTCGCACTCC...GAATAATTTCCACCACATTGAAGTACCTTTCGACTCTATCCAGTTTTTGGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | AGGAAAGTTTTAAACTTCAAGCTTTGTTCAGCATGTGTGCAGTTAGCATCCACAGGGCATAGTGCTCGATaGAGTCCCCTAGACAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: RKVLNFKLCSACVQLASTGHSAR*SPLDSP Trigger: AGGACTGTCTAGGGGACTTCATCGAGCACTATGCCC...TGTGGATGCTAACTGCACACATGCTGAACAAAGCTTGAAGTTTAAAACTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | ATGAACTTCAGTTCATTTCTTTCACCGAATGCCTTTATTCTGAGGTGTAACATAATGCAGGACTCTAGCTaGCCAGCCGCACCTGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: MNFSSFLSPNAFILRCNIMQDSS*PAAPAK Trigger: CTTCGCAGGTGCGGCTGGGCAGCTAGAGTCCTGCAT...TATGTTACACCTCAGAATAAAGGCATTCGGTGAAAGAAATGAACTGAAGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | AAAACCCAAAAACTGGATAGAGTCGAAAGGTACTTCAATGTGGTGGAAATTATTCGGATTCCACCGGGATaGAGGACTCTAGCTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KTQKLDRVERYFNVVEIIRIPPG*RTLAAQ Trigger: CTGGGCAGCTAGAGTCCTGCATCCCGGTGGAATCCG...AATAATTTCCACCACATTGAAGTACCTTTCGACTCTATCCAGTTTTTGGGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | ATTTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAGGTGCCGAGTGCTTCTaGCTCCTTCTGGAGCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: IFKSICLSTSRLTNGGLKGAECF*LLLEPC Trigger: GCAAGGCTCCAGAAGGAGGCAGAAGCACTCGGCACC...TTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | TTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCCTTACATTTCTGGTAAGAGGCAGTaGGTTGAAATTATCCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LILVFPSVEECQVLRPYISGKRQ*VEIIPP Trigger: GGGAGGGATAATTTCAACCCACTGCCTCTTACCAGA...AATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | TTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAACTGGAGCCTTGCTCTTTaGTGTGGCCATGCTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: FQIYMSLYLKADKWWFENWSLAL*CGHALA Trigger: GGCAAGAGCATGGCCACAGCAAAGAGCAAGGCTCCA...GTTTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | ATGTGTGCAGTTAGCATCCACAAAAGCACCATTGGGTATGGGAGAATTAGCACCAATCATTCCTTGTGCTaGGAGGACAATAGTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: MCAVSIHKSTIGYGRISTNHSLC*EDNSLF Trigger: GAACAGACTATTGTCCTCCCAGCACAAGGAATGATT...GGTGCTAATTCTCCCATACCCAATGGTGCTTTTGTGGATGCTAACTGCACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | AAAACCCAAAAACTGGATAGAGTCGAAAGGTACTTCAATGTGGTGGAAATTATTGTTTTCAGGACACTGTaGGGATGCTCTTCGGACCCC | + |
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Preference number: 4 (lower is better) Translates to: KTQKLDRVERYFNVVEIIVFRTL*GCSSDP Trigger: GGGGTCCGAAGAGCATCCTCACAGTGTCCTGAAAAC...AATAATTTCCACCACATTGAAGTACCTTTCGACTCTATCCAGTTTTTGGGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | TTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCCTTACATTAGGAATGTCAAGTACTaGGGCCTTACATTCATGATG | + |
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Preference number: 4 (lower is better) Translates to: LILVFPSVEECQVLRPYIRNVKY*GLTFMM Trigger: CATCATGAATGTAAGGCCTCAGTACTTGACATTCCT...AATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | ATTCATGATGAACTTCAGTTCATTTCTTTCACCGAATGCCTTTATTCTGAGGTGTTTCTGATGTTGTCCTaGCGGCCTCTCCCTATCCAG | + |
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Preference number: 4 (lower is better) Translates to: IHDELQFISFTECLYSEVFLMLS*RPLPIQ Trigger: CTGGATAGGGAGAGGCCGGCAGGACAACATCAGAAA...CACCTCAGAATAAAGGCATTCGGTGAAAGAAATGAACTGAAGTTCATCATGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | AAAACCCAAAAACTGGATAGAGTCGAAAGGTACTTCAATGTGGTGGAAATTATTTCTTTGCTGTGGCCATaGTCTTGCCGGTGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTQKLDRVERYFNVVEIISLLWP*SCRWPF Trigger: GAAAGGCCACCGGCAAGAGCATGGCCACAGCAAAGA...AATAATTTCCACCACATTGAAGTACCTTTCGACTCTATCCAGTTTTTGGGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | GAACAATACGGGACAAAAACCACCTTGCACCCTGTTAACACTAAAGCAGTTACACTCAATCATTCCTTGTaGTGGGAGGACAATAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQYGTKTTLHPVNTKAVTLNHSL*WEDNSL Trigger: CAGACTATTGTCCTCCCAGCACAAGGAATGATTGAG...TGTAACTGCTTTAGTGTTAACAGGGTGCAAGGTGGTTTTTGTCCCGTATTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | TTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCCTTACATTACAATAGTCTGTTCTTaGCCCAAACTGTGGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LILVFPSVEECQVLRPYITIVCS*PKLWPK Trigger: TTTTGGCCACAGTTTGGGCCAAGAACAGACTATTGT...AATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | ATTCATGATGAACTTCAGTTCATTTCTTTCACCGAATGCCTTTATTCTGAGGTGGAAAGAAGTCCCCTCTaGGAGTTCAAGCGGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IHDELQFISFTECLYSEVERSPL*EFKRVI Trigger: GATGACCCGCTTGAACTCCCAGAGGGGACTTCTTTC...CACCTCAGAATAAAGGCATTCGGTGAAAGAAATGAACTGAAGTTCATCATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| 3UTR CAA 72 bp | CAACATAAGATCAGTTTGGAAATGATGCCAGTGGTGTaGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QHKISLEMMPVV*ILVFPSVEECQ Trigger: TTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGGCATCATTTCCAAACTGATCTTATGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | ATTTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAAGGAAGCGACCCCGCTaGTTTTCCTTTAGGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFKSICLSTSRLTNGGLKRKRPR*FSFRSR Trigger: CCTAGACCTAAAGGAAAATCAGCGGGGTCGCTTCCT...TTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | TTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAACGATAGAGTCTACTCTTaGTTAGGCCAGAGCCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FQIYMSLYLKADKWWFENDRVYS*LGQSPL Trigger: TAGGGGGCTCTGGCCTAAGCAAGAGTAGACTCTATC...GTTTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | GAACAATACGGGACAAAAACCACCTTGCACCCTGTTAACACTAAAGCAGTTACAATTTGGGGTAATTTGTaGGCTTCAGGAAAATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EQYGTKTTLHPVNTKAVTIWGNL*ASGKFH Trigger: ATGGAATTTTCCTGAAGCTCACAAATTACCCCAAAT...TGTAACTGCTTTAGTGTTAACAGGGTGCAAGGTGGTTTTTGTCCCGTATTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR GCA 90 bp | TTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAACGGACAAAAACCACCTTaGACCCTGTTAACACTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQIYMSLYLKADKWWFENGQKPP*TLLTLK Trigger: CTTTAGTGTTAACAGGGTGCAAGGTGGTTTTTGTCC...GTTTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR TCA 90 bp | AGGAAAGTTTTAAACTTCAAGCTTTGTTCAGCATGTGTGCAGTTAGCATCCACAAACAGTGAAAAAGGTTaGTATTCTCTCTGGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKVLNFKLCSACVQLASTNSEKG*YSLWIW Trigger: CCAAATCCAGAGAGAATATCAACCTTTTTCACTGTT...TGTGGATGCTAACTGCACACATGCTGAACAAAGCTTGAAGTTTAAAACTTTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | TTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAACGTTTTTGTAGTATCATaGGGCTGTTCCTTATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQIYMSLYLKADKWWFENVFVVS*GCSLCL Trigger: CAAGCATAAGGAACAGCCCCATGATACTACAAAAAC...GTTTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGTTTTAAACTTCAAGCTTTGTTCAGCATGTGTGCAGTTAGCATCCACAACAAAACCCAAAAACTaGATAGAGTCGAAAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RKVLNFKLCSACVQLASTTKPKN*IESKGT Trigger: AGTACCTTTCGACTCTATCCAGTTTTTGGGTTTTGT...TGTGGATGCTAACTGCACACATGCTGAACAAAGCTTGAAGTTTAAAACTTTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CCA 90 bp | AAAACCCAAAAACTGGATAGAGTCGAAAGGTACTTCAATGTGGTGGAAATTATTCTCAAGGCTGACAAATaGTGGTTTGAAAACGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTQKLDRVERYFNVVEIILKADK*WFENER Trigger: CCTTTCGTTTTCAAACCACCATTTGTCAGCCTTGAG...AATAATTTCCACCACATTGAAGTACCTTTCGACTCTATCCAGTTTTTGGGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS GCA 90 bp | GCCGGCGGGCACTCACATCATCTCTGCCATCACCGCCGCCGCCGATaGCCTTCACGACCACCGCCGCCGCCACCGCCAGCTCTCGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AGGHSHHLCHHRRRR*PSRPPPPPPPALGP Trigger: GGGGCCGAGAGCTGGCGGTGGCGGCGGCGGTGGTCGTGAAGGGCATCGGCGGCGGCGGTGATGGCAGAGATGATGTGAGTGCCCGCCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS GCA 90 bp | CTCCGCGGCCCCAGGTCTCCAGCCGGCGGGCACTCACATCATCTCTaGCATCACCGCCGCCGCCGATGCCCTTCACGACCACCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LRGPRSPAGGHSHHL*HHRRRRCPSRPPPP Trigger: CGGCGGCGGTGGTCGTGAAGGGCATCGGCGGCGGCGGTGATGGCAGAGATGATGTGAGTGCCCGCCGGCTGGAGACCTGGGGCCGCGGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS GCA 90 bp | CTCTTTCCATCTTCAGATCATCTCTGCCATCACCGCCGCCGCCGATaGCCTTCACGACCACCGCCGCCGCCACCGCCAGCTCTCGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFPSSDHLCHHRRRR*PSRPPPPPPPALGP Trigger: GGGGCCGAGAGCTGGCGGTGGCGGCGGCGGTGGTCGTGAAGGGCATCGGCGGCGGCGGTGATGGCAGAGATGATCTGAAGATGGAAAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523392.2 |
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| CDS CCA 90 bp | GCCCGGCGCGTGGGGTGCAGCGGGAGTGCGAGGGGACTGGACAGGTaGGAAGATGGGAATGAGGACCGGGCGGCGGGAATGTTCTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: ARRVGCSGSARGLDR*EDGNEDRAAGMFSL Trigger: AAGTGAGAACATTCCCGCCGCCCGGTCCTCATTCCCATCTTCCCACCTGTCCAGTCCCCTCGCACTCCCGCTGCACCCCACGCGCCGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS GCA 90 bp | CGCTCTTCCTCAGTGCACTCTCTGACTGAAGCCCGGCGCGTGGGGTaGAGCGGGAGTGCGAGGGGACTGGACAGGTGGGAAGATGGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RSSSVHSLTEARRVG*SGSARGLDRWEDGN Trigger: ATTCCCATCTTCCCACCTGTCCAGTCCCCTCGCACTCCCGCTGCACCCCACGCGCCGGGCTTCAGTCAGAGAGTGCACTGAGGAAGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS GCA 90 bp | GGGAGGGTGCCGAGTGCTTCTGCCTCCTTCTGGAGCCTTGCTCTTTaGTGTGGCCATGCTCTTGCCGGTGGCCTTTCAGGCCCAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRVPSASASFWSLAL*CGHALAGGLSGPGG Trigger: CCCACCTGGGCCTGAAAGGCCACCGGCAAGAGCATGGCCACAGCAAAGAGCAAGGCTCCAGAAGGAGGCAGAAGCACTCGGCACCCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS GCA 90 bp | ACTGGTGGGGAGGGTGCCGAGTGCTTCTGCCTCCTTCTGGAGCCTTaGTCTTTGCTGTGGCCATGCTCTTGCCGGTGGCCTTTCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TGGEGAECFCLLLEP*SLLWPCSCRWPFRP Trigger: GGGCCTGAAAGGCCACCGGCAAGAGCATGGCCACAGCAAAGAGCAAGGCTCCAGAAGGAGGCAGAAGCACTCGGCACCCTCCCCACCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CCA 90 bp | CCACCGAGACTGGTGGGGAGGGTGCCGAGTGCTTCTGCCTCCTTCTaGAGCCTTGCTCTTTGCTGTGGCCATGCTCTTGCCGGTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPRLVGRVPSASASF*SLALCCGHALAGGL Trigger: AAGGCCACCGGCAAGAGCATGGCCACAGCAAAGAGCAAGGCTCCAGAAGGAGGCAGAAGCACTCGGCACCCTCCCCACCAGTCTCGGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS GCA 90 bp | GACCGGGCGGCGGGAATGTTCTCACTTCTCCGGATTCCACCGGGATaGAGGACTCTAGCTGCCCAGCCGCACCTGCGAAGAGACTACACT | + |
|
Preference number: 5 (lower is better) Translates to: DRAAGMFSLLRIPPG*RTLAAQPHLRRDYT Trigger: AGTGTAGTCTCTTCGCAGGTGCGGCTGGGCAGCTAGAGTCCTGCATCCCGGTGGAATCCGGAGAAGTGAGAACATTCCCGCCGCCCGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS GCA 90 bp | ACTGTGAGGATGCTCTTCGGACCCCACCGAGACTGGTGGGGAGGGTaGCGAGTGCTTCTGCCTCCTTCTGGAGCCTTGCTCTTTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVRMLFGPHRDWWGG*RVLLPPSGALLFAV Trigger: CACAGCAAAGAGCAAGGCTCCAGAAGGAGGCAGAAGCACTCGGCACCCTCCCCACCAGTCTCGGTGGGGTCCGAAGAGCATCCTCACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CCA 90 bp | TTTCAGGACACTGTGAGGATGCTCTTCGGACCCCACCGAGACTGGTaGGGAGGGTGCCGAGTGCTTCTGCCTCCTTCTGGAGCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FQDTVRMLFGPHRDW*GGCRVLLPPSGALL Trigger: GAGCAAGGCTCCAGAAGGAGGCAGAAGCACTCGGCACCCTCCCCACCAGTCTCGGTGGGGTCCGAAGAGCATCCTCACAGTGTCCTGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS GCA 90 bp | AATGTTCTCACTTCTCCGGATTCCACCGGGATGCAGGACTCTAGCTaGCCAGCCGCACCTGCGAAGAGACTACACTTCCCGAGGTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NVLTSPDSTGMQDSS*PAAPAKRLHFPRCS Trigger: TGAGCACCTCGGGAAGTGTAGTCTCTTCGCAGGTGCGGCTGGGCAGCTAGAGTCCTGCATCCCGGTGGAATCCGGAGAAGTGAGAACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS TCA 90 bp | TCAGCTCCGCTGCCACAGACAGGGAGAGGGTCAGTTTACTCTTTCTaGTGTTGTCCTGCCGGCCTCTCCCTATCCAGACTTCGGCTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SAPLPQTGRGSVYSF*CCPAGLSLSRLRLS Trigger: AGATAGCCGAAGTCTGGATAGGGAGAGGCCGGCAGGACAACATCAGAAAGAGTAAACTGACCCTCTCCCTGTCTGTGGCAGCGGAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS GCA 90 bp | GCCACAGACAGGGAGAGGGTCAGTTTACTCTTTCTGATGTTGTCCTaGCGGCCTCTCCCTATCCAGACTTCGGCTATCTTTAGGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ATDRERVSLLFLMLS*RPLPIQTSAIFRKR Trigger: CCGCTTCCTAAAGATAGCCGAAGTCTGGATAGGGAGAGGCCGGCAGGACAACATCAGAAAGAGTAAACTGACCCTCTCCCTGTCTGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS-3UTR CAA 90 bp | TTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCCTTACATTGCTGTGGCCATGCTCTaGCCGGTGGCCTTTCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LILVFPSVEECQVLRPYIAVAML*PVAFQA Trigger: GGCCTGAAAGGCCACCGGCAAGAGCATGGCCACAGC...AATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CAA 90 bp | TTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGCCTTACATTGGTGGGGGAGGGGTGTaGAGAACAATCGCAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: LILVFPSVEECQVLRPYIGGGGV*RTIADA Trigger: GGCGTCTGCGATTGTTCTCAACACCCCTCCCCCACC...AATGTAAGGCCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CAA 90 bp | AATGATGCCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTCTGGAGCCTTGCTCTTaGCTGTGGCCATGCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: NDASGVDTCLPFRGGMSSLEPCS*LWPCSC Trigger: GCAAGAGCATGGCCACAGCAAAGAGCAAGGCTCCAG...ACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGGCATCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS GCA 90 bp | TTCAATCAGCTGAACCAAGGCATCACGAAACTCAATCATTCCTTGTaGTGGGAGGACAATAGTCTGTTCTTGGCCCAAACTGTGGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FNQLNQGITKLNHSL*WEDNSLFLAQTVAK Trigger: TTTGGCCACAGTTTGGGCCAAGAACAGACTATTGTCCTCCCAGCACAAGGAATGATTGAGTTTCGTGATGCCTTGGTTCAGCTGATTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS-3UTR CAA 90 bp | CCAGTGGTGTTGATACTTGTCTTCCCTTCCGTGGAGGAATGTCAAGTACTGAGGAAACTCAATCATTCCTaGTGCTGGGAGGACAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVVLILVFPSVEECQVLRKLNHS*CWEDNS Trigger: ACTATTGTCCTCCCAGCACAAGGAATGATTGAGTTT...CCTCAGTACTTGACATTCCTCCACGGAAGGGAAGACAAGTATCAACACCACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS CCA 90 bp | AATCAGCTGAACCAAGGCATCACGAAACTCAATCATTCCTTGTGCTaGGAGGACAATAGTCTGTTCTTGGCCCAAACTGTGGCCAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: NQLNQGITKLNHSLC*EDNSLFLAQTVAKI Trigger: TATTTTGGCCACAGTTTGGGCCAAGAACAGACTATTGTCCTCCCAGCACAAGGAATGATTGAGTTTCGTGATGCCTTGGTTCAGCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CCA 90 bp | ATCAAAGTAGAACCTTTTATTGTCCACTCTGAAAGAAGTCCCCTCTaGGAGTTCAAGCGGGTCATCGTCTCCACCTCTTCGTTCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: IKVEPFIVHSERSPL*EFKRVIVSTSSFFY Trigger: ATAGAAGAACGAAGAGGTGGAGACGATGACCCGCTTGAACTCCCAGAGGGGACTTCTTTCAGAGTGGACAATAAAAGGTTCTACTTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS-3UTR CAA 90 bp | TTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAACTTACTCTTTCTGATGTaGTCCTGCCGGCCTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FQIYMSLYLKADKWWFENLLFLM*SCRPLP Trigger: AGGGAGAGGCCGGCAGGACAACATCAGAAAGAGTAA...GTTTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CAA 90 bp | GAACAATACGGGACAAAAACCACCTTGCACCCTGTTAACACTAAAGCAGTTACACTGACAAATGGTGGTTaGAAAACGAAAGGCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: EQYGTKTTLHPVNTKAVTLTNGG*KTKGLM Trigger: CATCAAGCCTTTCGTTTTCAAACCACCATTTGTCAG...TGTAACTGCTTTAGTGTTAACAGGGTGCAAGGTGGTTTTTGTCCCGTATTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CAA 90 bp | ATTTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAGACAATAGTCTGTTCTaGGCCCAAACTGTGGCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IFKSICLSTSRLTNGGLKDNSLF*AQTVAK Trigger: TTTGGCCACAGTTTGGGCCAAGAACAGACTATTGTC...TTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CAA 90 bp | ATTTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAATGATGCCAGTGGTGTaGATACTTGTCTTCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IFKSICLSTSRLTNGGLKMMPVV*ILVFPS Trigger: GGAAGGGAAGACAAGTATCAACACCACTGGCATCAT...TTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CAA 90 bp | AGGAAAGTTTTAAACTTCAAGCTTTGTTCAGCATGTGTGCAGTTAGCATCCACACAACATAAGATCAGTTaGGAAATGATGCCAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKVLNFKLCSACVQLASTQHKIS*EMMPVV Trigger: CACCACTGGCATCATTTCCAAACTGATCTTATGTTG...TGTGGATGCTAACTGCACACATGCTGAACAAAGCTTGAAGTTTAAAACTTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CAA 90 bp | AAACCCAAAAACTGGATAGAGTCGAAAGGTACTTCAATGTGGTGGAAATTATTCTCCACAAAAGCACCATaGGGTATGGGAGAATTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KPKNWIESKGTSMWWKLFSTKAP*GMGELA Trigger: TGCTAATTCTCCCATACCCAATGGTGCTTTTGTGGA...GAATAATTTCCACCACATTGAAGTACCTTTCGACTCTATCCAGTTTTTGGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
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| CDS-3UTR CAA 90 bp | ATTTTCAAATCTATATGTCTCTCTACCTCAAGGCTGACAAATGGTGGTTTGAAAGGGACAAAAACCACCTaGCACCCTGTTAACACTAAA | + |
|
Preference number: 5 (lower is better) Translates to: IFKSICLSTSRLTNGGLKGTKTT*HPVNTK Trigger: TTTAGTGTTAACAGGGTGCAAGGTGGTTTTTGTCCC...TTTCAAACCACCATTTGTCAGCCTTGAGGTAGAGAGACATATAGATTTGAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339382.3 |
||
| CDS CCA 90 bp | CCTTGTCCAAGCTTTGAATGGAACAGTAATAGTATTACGGTAAGGTaGTCTCACCTCACTTACCTTCAGGAAAATTCCATATTTATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PCPSFEWNSNSITVR*SHLTYLQENSIFIR Trigger: TCTAATAAATATGGAATTTTCCTGAAGGTAAGTGAGGTGAGACCACCTTACCGTAATACTATTACTGTTCCATTCAAAGCTTGGACAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000475541.2 ENST00000523392.2 |
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| CDS GCA 72 bp | CACTCACATCATCTCTGCCATCACCGCCGCCGCCGATaGCCTTCACGACCACCGCCGCCGCCACCGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HSHHLCHHRRRR*PSRPPPPPPPA Trigger: AGCTGGCGGTGGCGGCGGCGGTGGTCGTGAAGGGCATCGGCGGCGGCGGTGATGGCAGAGATGATGTGAGTG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
||
| CDS GCA 72 bp | CCCAGGTCTCCAGCCGGCGGGCACTCACATCATCTCTaGCATCACCGCCGCCGCCGATGCCCTTCACGACCA | + |
|
Preference number: 6 (lower is better) Translates to: PRSPAGGHSHHL*HHRRRRCPSRP Trigger: TGGTCGTGAAGGGCATCGGCGGCGGCGGTGATGGCAGAGATGATGTGAGTGCCCGCCGGCTGGAGACCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
||
| CDS CCA 72 bp | GTGGGGTGCAGCGGGAGTGCGAGGGGACTGGACAGGTaGGAAGATGGGAATGAGGACCGGGCGGCGGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: VGCSGSARGLDR*EDGNEDRAAGM Trigger: CATTCCCGCCGCCCGGTCCTCATTCCCATCTTCCCACCTGTCCAGTCCCCTCGCACTCCCGCTGCACCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS TCA 72 bp | GAAGAGGGGGTCTCCGCTCTTCCTCAGTGCACTCTCTaGCTGAAGCCCGGCGCGTGGGGTGCAGCGGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: EEGVSALPQCTL*LKPGAWGAAGV Trigger: CACTCCCGCTGCACCCCACGCGCCGGGCTTCAGTCAGAGAGTGCACTGAGGAAGAGCGGAGACCCCCTCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS GCA 72 bp | TCAGTGCACTCTCTGACTGAAGCCCGGCGCGTGGGGTaGAGCGGGAGTGCGAGGGGACTGGACAGGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SVHSLTEARRVG*SGSARGLDRWE Trigger: TTCCCACCTGTCCAGTCCCCTCGCACTCCCGCTGCACCCCACGCGCCGGGCTTCAGTCAGAGAGTGCACTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS CAA 90 bp | GGGGAGGGTGCCGAGTGCTTCTGCCTCCTTCTGGAGCCTTGCTCTTaGCTGTGGCCATGCTCTTGCCGGTGGCCTTTCAGGCCCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GEGAECFCLLLEPCS*LWPCSCRWPFRPRW Trigger: CCACCTGGGCCTGAAAGGCCACCGGCAAGAGCATGGCCACAGCAAAGAGCAAGGCTCCAGAAGGAGGCAGAAGCACTCGGCACCCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS GCA 72 bp | TCGGACCCCACCGAGACTGGTGGGGAGGGTGCCGAGTaGTTCTGCCTCCTTCTGGAGCCTTGCTCTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SDPTETGGEGAE*FCLLLEPCSLL Trigger: CAGCAAAGAGCAAGGCTCCAGAAGGAGGCAGAAGCACTCGGCACCCTCCCCACCAGTCTCGGTGGGGTCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CAA 90 bp | GACTGGTGGGGAGGGTGCCGAGTGCTTCTGCCTCCTTCTGGAGCCTaGCTCTTTGCTGTGGCCATGCTCTTGCCGGTGGCCTTTCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: DWWGGCRVLLPPSGA*LFAVAMLLPVAFQA Trigger: GGCCTGAAAGGCCACCGGCAAGAGCATGGCCACAGCAAAGAGCAAGGCTCCAGAAGGAGGCAGAAGCACTCGGCACCCTCCCCACCAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CCA 72 bp | ACTGTGAGGATGCTCTTCGGACCCCACCGAGACTGGTaGGGAGGGTGCCGAGTGCTTCTGCCTCCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TVRMLFGPHRDW*GGCRVLLPPSG Trigger: TCCAGAAGGAGGCAGAAGCACTCGGCACCCTCCCCACCAGTCTCGGTGGGGTCCGAAGAGCATCCTCACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CCA 72 bp | GACACTGTGAGGATGCTCTTCGGACCCCACCGAGACTaGTGGGGAGGGTGCCGAGTGCTTCTGCCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: DTVRMLFGPHRD*WGGCRVLLPPS Trigger: AGAAGGAGGCAGAAGCACTCGGCACCCTCCCCACCAGTCTCGGTGGGGTCCGAAGAGCATCCTCACAGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS GCA 72 bp | ACTTCTCCGGATTCCACCGGGATGCAGGACTCTAGCTaGCCAGCCGCACCTGCGAAGAGACTACACTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: TSPDSTGMQDSS*PAAPAKRLHFP Trigger: CGGGAAGTGTAGTCTCTTCGCAGGTGCGGCTGGGCAGCTAGAGTCCTGCATCCCGGTGGAATCCGGAGAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS GCA 72 bp | GCGGGAATGTTCTCACTTCTCCGGATTCCACCGGGATaGAGGACTCTAGCTGCCCAGCCGCACCTGCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: AGMFSLLRIPPG*RTLAAQPHLRR Trigger: TCTTCGCAGGTGCGGCTGGGCAGCTAGAGTCCTGCATCCCGGTGGAATCCGGAGAAGTGAGAACATTCCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339382.3 ENST00000475541.2 |
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| CDS GCA 72 bp | AGTGGGAGTGCTGGGCCTGGGGATAGAGTCTACTCTTaGTTAGGCCAGAGCCCCCTACATTCTTGCCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: SGSAGPGDRVYS*LGQSPLHSCLR Trigger: GCGGAGGCAAGAATGTAGGGGGCTCTGGCCTAAGCAAGAGTAGACTCTATCCCCAGGCCCAGCACTCCCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CAA 90 bp | TCCGCTGCCACAGACAGGGAGAGGGTCAGTTTACTCTTTCTGATGTaGTCCTGCCGGCCTCTCCCTATCCAGACTTCGGCTATCTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: SAATDRERVSLLFLM*SCRPLPIQTSAIFR Trigger: CCTAAAGATAGCCGAAGTCTGGATAGGGAGAGGCCGGCAGGACAACATCAGAAAGAGTAAACTGACCCTCTCCCTGTCTGTGGCAGCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS TCA 72 bp | CTGCCACAGACAGGGAGAGGGTCAGTTTACTCTTTCTaGTGTTGTCCTGCCGGCCTCTCCCTATCCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: LPQTGRGSVYSF*CCPAGLSLSRL Trigger: AAGTCTGGATAGGGAGAGGCCGGCAGGACAACATCAGAAAGAGTAAACTGACCCTCTCCCTGTCTGTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS GCA 72 bp | AGGGAGAGGGTCAGTTTACTCTTTCTGATGTTGTCCTaGCGGCCTCTCCCTATCCAGACTTCGGCTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: RERVSLLFLMLS*RPLPIQTSAIF Trigger: AAAGATAGCCGAAGTCTGGATAGGGAGAGGCCGGCAGGACAACATCAGAAAGAGTAAACTGACCCTCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CCA 72 bp | GAACCTTTTATTGTCCACTCTGAAAGAAGTCCCCTCTaGGAGTTCAAGCGGGTCATCGTCTCCACCTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: EPFIVHSERSPL*EFKRVIVSTSS Trigger: CGAAGAGGTGGAGACGATGACCCGCTTGAACTCCCAGAGGGGACTTCTTTCAGAGTGGACAATAAAAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CAA 90 bp | ACGAAACTCAATCATTCCTTGTGCTGGGAGGACAATAGTCTGTTCTaGGCCCAAACTGTGGCCAAAATAACCTATCATGCCAGTCCCCCG | + |
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Preference number: 6 (lower is better) Translates to: TKLNHSLCWEDNSLF*AQTVAKITYHASPP Trigger: CGGGGGACTGGCATGATAGGTTATTTTGGCCACAGTTTGGGCCAAGAACAGACTATTGTCCTCCCAGCACAAGGAATGATTGAGTTTCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CAA 90 bp | GTCTTCAATCAGCTGAACCAAGGCATCACGAAACTCAATCATTCCTaGTGCTGGGAGGACAATAGTCTGTTCTTGGCCCAAACTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VFNQLNQGITKLNHS*CWEDNSLFLAQTVA Trigger: GGCCACAGTTTGGGCCAAGAACAGACTATTGTCCTCCCAGCACAAGGAATGATTGAGTTTCGTGATGCCTTGGTTCAGCTGATTGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS GCA 72 bp | CTGAACCAAGGCATCACGAAACTCAATCATTCCTTGTaGTGGGAGGACAATAGTCTGTTCTTGGCCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: LNQGITKLNHSL*WEDNSLFLAQT Trigger: AGTTTGGGCCAAGAACAGACTATTGTCCTCCCAGCACAAGGAATGATTGAGTTTCGTGATGCCTTGGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CCA 72 bp | AACCAAGGCATCACGAAACTCAATCATTCCTTGTGCTaGGAGGACAATAGTCTGTTCTTGGCCCAAACTGTG | + |
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Preference number: 6 (lower is better) Translates to: NQGITKLNHSLC*EDNSLFLAQTV Trigger: CACAGTTTGGGCCAAGAACAGACTATTGTCCTCCCAGCACAAGGAATGATTGAGTTTCGTGATGCCTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CAA 72 bp | AATCATTCCTTGTGCTGGGAGGACAATAGTCTGTTCTaGGCCCAAACTGTGGCCAAAATAACCTATCATGCC | + |
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Preference number: 6 (lower is better) Translates to: NHSLCWEDNSLF*AQTVAKITYHA Trigger: GGCATGATAGGTTATTTTGGCCACAGTTTGGGCCAAGAACAGACTATTGTCCTCCCAGCACAAGGAATGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000339382.3 ENST00000475541.2 ENST00000523392.2 |
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| CDS CCA 72 bp | GATAAAATTCTCCCCAAACCTTGTCCAAGCTTTGAATaGAACAGTAATAGTATTACGGTAAGGTGGTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: DKILPKPCPSFE*NSNSITVRWSH Trigger: GTGAGACCACCTTACCGTAATACTATTACTGTTCCATTCAAAGCTTGGACAAGGTTTGGGGAGAATTTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000475541.2 ENST00000523392.2 |
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