RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPRU (Homo sapiens)

Ensembl gene IDs: ENSG00000060656

Ensembl transcript IDs: ENST00000345512.7, ENST00000373779.8, ENST00000415600.6, ENST00000428026.6, ENST00000460170.2, ENST00000465525.6, ENST00000492954.1, ENST00000493601.5, ENST00000526080.1, ENST00000527027.1, ENST00000531385.1

Found 879 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCCTGAGTCCCCCAGAGCCAGCCGTCCTGAGCCTTTGTCACTCTaGCAGGCAGCACCAGGCCTCTCAGCACAGGCCTGCAGGACCCTA +
Preference number: 1 (lower is better)
Translates to: WPESPRASRPEPLSL*QAAPGLSAQACRTL
Trigger: TAGGGTCCTGCAGGCCTGTGCTGAGAGGCCTGGTGCTGCCTGGCAGAGTGACAAAGGCTCAGGACGGCTGGCTCTGGGGGACTCAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR CCA 90 bp GGCCCACCACCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTaGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCC +
Preference number: 1 (lower is better)
Translates to: GPPPAHGTSERPCPQ*KGEQDSPASTPVLA
Trigger: GGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGGTGGTGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR GCA 90 bp GGGAACCTTGGCCTGGGATGCTCTCTGCAGGGCCTCACTCATCCCTaGCAAAAGCCAGGATGGTGCCAAGGGGCTTGGCCTGAGTCCCCC +
Preference number: 1 (lower is better)
Translates to: GNLGLGCSLQGLTHP*QKPGWCQGAWPESP
Trigger: GGGGGACTCAGGCCAAGCCCCTTGGCACCATCCTGGCTTTTGGCAGGGATGAGTGAGGCCCTGCAGAGAGCATCCCAGGCCAAGGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR CCA 90 bp AGTCCCAGTACATCCTCTACCCACATGCAGAGGGGGCAGGCTGAGTaGGAACCTTGGCCTGGGATGCTCTCTGCAGGGCCTCACTCATCC +
Preference number: 1 (lower is better)
Translates to: SPSTSSTHMQRGQAE*EPWPGMLSAGPHSS
Trigger: GGATGAGTGAGGCCCTGCAGAGAGCATCCCAGGCCAAGGTTCCCACTCAGCCTGCCCCCTCTGCATGTGGGTAGAGGATGTACTGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR CCA 90 bp GATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTaGGCAGAGCAGGAGGCACTGATCTTCCTCGCCAGTCCAGGATGG +
Preference number: 1 (lower is better)
Translates to: DSPASTPVLAPWECV*AEQEALIFLASPGW
Trigger: CCATCCTGGACTGGCGAGGAAGATCAGTGCCTCCTGCTCTGCCCAAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR GCA 90 bp AGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATaGAGAGGGGGCAGGCTGAGTGGGAACCTTGGCCTGGGATGCTCT +
Preference number: 1 (lower is better)
Translates to: RWNPKCQVPVHPLPT*RGGRLSGNLGLGCS
Trigger: AGAGCATCCCAGGCCAAGGTTCCCACTCAGCCTGCCCCCTCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR CCA 90 bp AGAATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATaGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGC +
Preference number: 1 (lower is better)
Translates to: RIETCFPRTFRGWAR*NPKCQVPVHPLPTC
Trigger: GCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGCCCTGAGTGTGCAGTaGGTGCCCCAGGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPALSVQ*VPQARA
Trigger: GGCCCTGGCCTGGGGCACCCACTGCACACTCAGGGC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR CAA 90 bp ACCCTATGGAGGTGGGGCTGGGCTGCAGACTTGCTAAGCTCCTCCTaGGCCCACCACCCGCCCATGGGACAAGCGAAAGGCCCTGCCCAC +
Preference number: 2 (lower is better)
Translates to: TLWRWGWAADLLSSS*AHHPPMGQAKGPAH
Trigger: GTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGGTGGTGGGCCAAGGAGGAGCTTAGCAAGTCTGCAGCCCAGCCCCACCTCCATAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGCCCTGAGTGTGCAGTaGGTGCCCCAGGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQALSVQ*VPQARA
Trigger: GGCCCTGGCCTGGGGCACCCACTGCACACTCAGGGC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR TCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCCAAGGGGCTTGGCCTaGGTCCCCCAGAGCCAGCCG +
Preference number: 2 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIPRGLA*VPQSQP
Trigger: CGGCTGGCTCTGGGGGACTCAGGCCAAGCCCCTTGG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCCCACCACCCGCCCATaGGACAAGCGAAAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQPTTRP*DKRKAL
Trigger: CAGGGCCTTTCGCTTGTCCCATGGGCGGGTGGTGGG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCTATGGAGGTGGGGCTaGGCTGCAGACTTGCTAAGC +
Preference number: 2 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPLWRWG*AADLLS
Trigger: GCTTAGCAAGTCTGCAGCCCAGCCCCACCTCCATAG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGTGGTGCCAAGGGGCTTaGCCTGAGTCCCCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQWCQGA*PESPRA
Trigger: GGCTCTGGGGGACTCAGGCCAAGCCCCTTGGCACCA...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGTGGGAACCTTGGCCTaGGATGCTCTCTGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSVGTLA*DALCRA
Trigger: GGCCCTGCAGAGAGCATCCCAGGCCAAGGTTCCCAC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR TCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGCAGAGGGGGCAGGCTaGGTGGGAACCTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: IETCFPRTFRGWARWNPKAEGAG*VGTLAW
Trigger: CCAGGCCAAGGTTCCCACTCAGCCTGCCCCCTCTGC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGAGGGGGCAGGCTGAGTaGGAACCTTGGCCTGGGATG +
Preference number: 2 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQRGQAE*EPWPGM
Trigger: CATCCCAGGCCAAGGTTCCCACTCAGCCTGCCCCCT...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGAGCCTTTGTCACTCTaGCAGGCAGCACCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDREPLSL*QAAPGL
Trigger: GAGGCCTGGTGCTGCCTGGCAGAGTGACAAAGGCTC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCAAAAGCCAGGATGGTaGCAAGGGGCTTGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSQKPGW*QGAWPE
Trigger: CTCAGGCCAAGCCCCTTGGCACCATCCTGGCTTTTG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR TCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCAGAGCAGGAGGCACTaGTCTTCCTCGCCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFQSRRH*SSSPVQ
Trigger: CTGGACTGGCGAGGAAGATCAGTGCCTCCTGCTCTG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR TCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACACAGAGCCAGCCGTCCTaGGCCTTTGTCACTCTGCCA +
Preference number: 2 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTQSQPS*AFVTLP
Trigger: TGGCAGAGTGACAAAGGCTCAGGACGGCTGGCTCTG...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR TCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCAGGCCAGTGAGGCCTaGAGATTAAAGGAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSQASEA*RLKEEG
Trigger: CCCCTCTTCCTTTAATCTTCAGGCCTCACTGGCCTG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCAGCATCCACTCCAGTaGTTGCCCCATGGGAGTGTG +
Preference number: 2 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRQHPLQ*LPHGSV
Trigger: CACACTCCCATGGGGCAAGCACTGGAGTGGATGCTG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACACTCTCAGCACAGGCCTaGAGGACCCTATGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTLSAQA*RTLWRW
Trigger: CCACCTCCATAGGGTCCTGCAGGCCTGTGCTGAGAG...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAGCCCTGAGTGTGCAGTaGGTGCCCCAGGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRALSVQ*VPQARA
Trigger: GGCCCTGGCCTGGGGCACCCACTGCACACTCAGGGC...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTGCCAAAAGCCAGGATaGTGCCAAGGGGCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRCQKPG*CQGAWP
Trigger: AGGCCAAGCCCCTTGGCACCATCCTGGCTTTTGGCA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGTGCCAAAAGCCAGGATaGTGCCAAGGGGCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQCQKPG*CQGAWP
Trigger: AGGCCAAGCCCCTTGGCACCATCCTGGCTTTTGGCA...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCAGGGGGCAGGCTGAGTaGGAACCTTGGCCTGGGATG +
Preference number: 2 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPRGQAE*EPWPGM
Trigger: CATCCCAGGCCAAGGTTCCCACTCAGCCTGCCCCCT...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR TCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCAGGCCAGTGAGGCCTaGAGATTAAAGGAAGAGGGG +
Preference number: 2 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQQASEA*RLKEEG
Trigger: CCCCTCTTCCTTTAATCTTCAGGCCTCACTGGCCTG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCACAAGCGAAAGGCCCTaGCCACAGTGGAAGGGGGAG +
Preference number: 2 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTTSERP*PQWKGE
Trigger: CTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGT...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGAGCCTTTGTCACTCTaGCAGGCAGCACCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: IETCFPRTFRGWARWNPKEPLSL*QAAPGL
Trigger: GAGGCCTGGTGCTGCCTGGCAGAGTGACAAAGGCTC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGCCTGGGATGCTCTCTaGAGGGCCTCACTCATCCCT +
Preference number: 2 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTAWDAL*RASLIP
Trigger: AGGGATGAGTGAGGCCCTGCAGAGAGCATCCCAGGC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGCCTGGGATGCTCTCTaGAGGGCCTCACTCATCCCT +
Preference number: 2 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPAWDAL*RASLIP
Trigger: AGGGATGAGTGAGGCCCTGCAGAGAGCATCCCAGGC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAAGGCCCTGCCCACAGTaGAAGGGGGAGCAAGATAGC +
Preference number: 2 (lower is better)
Translates to: IETCFPRTFRGWARWNPKRPCPQ*KGEQDS
Trigger: GCTATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCT...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCAGGACCCTATGGAGGTaGGGCTGGGCTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIRTLWR*GWAADL
Trigger: CAAGTCTGCAGCCCAGCCCCACCTCCATAGGGTCCT...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCCAAAAGCCAGGATGGTaGCAAGGGGCTTGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPQKPGW*QGAWPE
Trigger: CTCAGGCCAAGCCCCTTGGCACCATCCTGGCTTTTG...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGGCCTCACTCATCCCTaGCAAAAGCCAGGATGGTGC +
Preference number: 2 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPGLTHP*QKPGWC
Trigger: GCACCATCCTGGCTTTTGGCAGGGATGAGTGAGGCC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCAACCTTGGCCTGGGATaGTCTCTGCAGGGCCTCACT +
Preference number: 2 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPNLGLG*SLQGLT
Trigger: AGTGAGGCCCTGCAGAGAGCATCCCAGGCCAAGGTT...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGGAGGACAGTCAGTGTaGCCCACTGGCTATTCAGAA +
Preference number: 2 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQGGQSV*PTGYSE
Trigger: TTCTGAATAGCCAGTGGGGCACACTGACTGTCCTCC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGATGGTGCCAAGGGGCTTaGCCTGAGTCCCCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRWCQGA*PESPRA
Trigger: GGCTCTGGGGGACTCAGGCCAAGCCCCTTGGCACCA...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCTGCCAAAAGCCAGGATaGTGCCAAGGGGCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: GPSGAGPDGILNAKSQYICQKPG*CQGAWP
Trigger: AGGCCAAGCCCCTTGGCACCATCCTGGCTTTTGGCA...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGAGGACCTTCAGGGGCTaGGCCAGATGGAATCCTAAA +
Preference number: 2 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQRTFRG*ARWNPK
Trigger: TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCT...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR TCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCGCAGAGGGGGCAGGCTaGGTGGGAACCTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: HVYLQSALQTSAYASPQPAEGAG*VGTLAW
Trigger: CCAGGCCAAGGTTCCCACTCAGCCTGCCCCCTCTGC...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR TCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACCCACAACGGGCAGCCTaGCCAGGAGCCACAGGGGCC +
Preference number: 2 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHPQRAA*PGATGA
Trigger: GGCCCCTGTGGCTCCTGGTCAGGCTGCCCGTTGTGG...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAGCGCTGCAGTTCCCCTaGGGAGGACAGTCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRALQFP*GGQSVC
Trigger: GCACACTGACTGTCCTCCCCAGGGGAACTGCAGCGC...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGTAATAGGCAGATCCTaGTTCAGGGAAGCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQVIGRS*FREAQS
Trigger: GCTCTGAGCTTCCCTGAACCAGGATCTGCCTATTAC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACATTCATTCTGCAACAGTaGGTCAGGCAGGGAAGGAGC +
Preference number: 2 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTFILQQ*VRQGRS
Trigger: GCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAA...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAGAGGTGGGGCTGGGCTaGAGACTTGCTAAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: IYKALYKHQLMPPHSPLREVGLG*RLAKLL
Trigger: GAGGAGCTTAGCAAGTCTGCAGCCCAGCCCCACCTC...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAAGGCCCTGCCCACAGTaGAAGGGGGAGCAAGATAGC +
Preference number: 2 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRRPCPQ*KGEQDS
Trigger: GCTATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCT...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAAGGACCCTATGGAGGTaGGGCTGGGCTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRRTLWR*GWAADL
Trigger: CAAGTCTGCAGCCCAGCCCCACCTCCATAGGGTCCT...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAAGGACCCTATGGAGGTaGGGCTGGGCTGCAGACTTG +
Preference number: 2 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRRTLWR*GWAADL
Trigger: CAAGTCTGCAGCCCAGCCCCACCTCCATAGGGTCCT...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGACAGCATCCACTCCAGTaGTTGCCCCATGGGAGTGTG +
Preference number: 2 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRQHPLQ*LPHGSV
Trigger: CACACTCCCATGGGGCAAGCACTGGAGTGGATGCTG...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAAACCTTGGCCTGGGATaGTCTCTGCAGGGCCTCACT +
Preference number: 2 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRNLGLG*SLQGLT
Trigger: AGTGAGGCCCTGCAGAGAGCATCCCAGGCCAAGGTT...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCAGATGGAATCCTAAATaGCAAGTCCCAGTACATCCT +
Preference number: 2 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSRWNPK*QVPVHP
Trigger: AGGATGTACTGGGACTTGGCATTTAGGATTCCATCT...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGACCATGGGAGTGTGTTTaGGCAGAGCAGGAGGCACTG +
Preference number: 2 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRPWECV*AEQEAL
Trigger: CAGTGCCTCCTGCTCTGCCCAAACACACTCCCATGG...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGACTATGGAGGTGGGGCTaGGCTGCAGACTTGCTAAGC +
Preference number: 2 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRLWRWG*AADLLS
Trigger: GCTTAGCAAGTCTGCAGCCCAGCCCCACCTCCATAG...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCGCGCTGCAGTTCCCCTaGGGAGGACAGTCAGTGTGC +
Preference number: 2 (lower is better)
Translates to: HVYLQSALQTSAYASPQPALQFP*GGQSVC
Trigger: GCACACTGACTGTCCTCCCCAGGGGAACTGCAGCGC...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR TCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACCAGAGCAGGAGGCACTaGTCTTCCTCGCCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHQSRRH*SSSPVQ
Trigger: CTGGACTGGCGAGGAAGATCAGTGCCTCCTGCTCTG...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR TCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACCAGAGCCAGCCGTCCTaGGCCTTTGTCACTCTGCCA +
Preference number: 2 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHQSQPS*AFVTLP
Trigger: TGGCAGAGTGACAAAGGCTCAGGACGGCTGGCTCTG...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAATCCACTCCAGTGCTTaGCCCATGGGAGTGTGTTTG +
Preference number: 2 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRIHSSA*PMGVCL
Trigger: CAAACACACTCCCATGGGGCAAGCACTGGAGTGGAT...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR GCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACGAGCCTTTGTCACTCTaGCAGGCAGCACCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHEPLSL*QAAPGL
Trigger: GAGGCCTGGTGCTGCCTGGCAGAGTGACAAAGGCTC...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR GCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACGGGTATGACCAGCCCTaGTCTAACACTGCCCCTCCC +
Preference number: 2 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHGYDQP*SNTAPP
Trigger: GGGAGGGGCAGTGTTAGAGCAGGGCTGGTCATACCC...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAAATGGGGGTGTGGCCTaGCCCATTTTAAAGAGACCT +
Preference number: 2 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRNGGVA*PILKRP
Trigger: AGGTCTCTTTAAAATGGGGCAGGCCACACCCCCATT...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp GGCTGCTCTGTGGCATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACACCATGGGAGTGTGTTTaGGCAGAGCAGGAGGCACTG +
Preference number: 2 (lower is better)
Translates to: GCSVAFREHVYLQSALQTPWECV*AEQEAL
Trigger: CAGTGCCTCCTGCTCTGCCCAAACACACTCCCATGG...TGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATGCCACAGAGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428026.6
3UTR-3UTR TCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCAGCAGGACAGGCCAGTaGGGCCTGAAGATTAAAGGA +
Preference number: 2 (lower is better)
Translates to: HVYLQSALQTSAYASPQPSRTGQ*GLKIKG
Trigger: TCCTTTAATCTTCAGGCCTCACTGGCCTGTCCTGCT...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGTGGGAACCTTGGCCTaGGATGCTCTCTGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: HSESTFIYKALYKHQLMPVGTLA*DALCRA
Trigger: GGCCCTGCAGAGAGCATCCCAGGCCAAGGTTCCCAC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCTCTCAGCACAGGCCTaGAGGACCCTATGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: HSESTFIYKALYKHQLMPLSAQA*RTLWRW
Trigger: CCACCTCCATAGGGTCCTGCAGGCCTGTGCTGAGAG...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTAGGCCCTGCCCACAGTaGAAGGGGGAGCAAGATAGC +
Preference number: 2 (lower is better)
Translates to: HSESTFIYKALYKHQLMPRPCPQ*KGEQDS
Trigger: GCTATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCT...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGGACCTTCAGGGGCTaGGCCAGATGGAATCCTAAA +
Preference number: 2 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHRTFRG*ARWNPK
Trigger: TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCT...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCAAAAGCCAGGATGGTaGCAAGGGGCTTGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: HSESTFIYKALYKHQLMPQKPGW*QGAWPE
Trigger: CTCAGGCCAAGCCCCTTGGCACCATCCTGGCTTTTG...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGGCCTCACTCATCCCTaGCAAAAGCCAGGATGGTGC +
Preference number: 2 (lower is better)
Translates to: HSESTFIYKALYKHQLMPGLTHP*QKPGWC
Trigger: GCACCATCCTGGCTTTTGGCAGGGATGAGTGAGGCC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCATCCTCTACCCACATaGAGAGGGGGCAGGCTGAGT +
Preference number: 2 (lower is better)
Translates to: HSESTFIYKALYKHQLMPHPLPT*RGGRLS
Trigger: ACTCAGCCTGCCCCCTCTGCATGTGGGTAGAGGATG...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR TCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTAGCAGGACAGGCCAGTaGGGCCTGAAGATTAAAGGA +
Preference number: 2 (lower is better)
Translates to: HSESTFIYKALYKHQLMPSRTGQ*GLKIKG
Trigger: TCCTTTAATCTTCAGGCCTCACTGGCCTGTCCTGCT...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTAGGGGCTGGGCCAGATaGAATCCTAAATGCCAAGTC +
Preference number: 2 (lower is better)
Translates to: HSESTFIYKALYKHQLMPRGWAR*NPKCQV
Trigger: GACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR GCA 72 bp GGCCCACCACCCGCCCATGGGACAAGCGAAAGGCCCTaGCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: GPPPAHGTSERP*PQWKGEQDSPA
Trigger: TGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGGTGGTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR GCA 72 bp TCCCCCAGAGCCAGCCGTCCTGAGCCTTTGTCACTCTaGCAGGCAGCACCAGGCCTCTCAGCACAGGCCTGC +
Preference number: 3 (lower is better)
Translates to: SPRASRPEPLSL*QAAPGLSAQAC
Trigger: GCAGGCCTGTGCTGAGAGGCCTGGTGCTGCCTGGCAGAGTGACAAAGGCTCAGGACGGCTGGCTCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCTTGCTAAGCTCCTCCTaGGCCCACCACCCGCCCATG +
Preference number: 3 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPLLSSS*AHHPPM
Trigger: CATGGGCGGGTGGTGGGCCAAGGAGGAGCTTAGCAA...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTTGCTAAGCTCCTCCTaGGCCCACCACCCGCCCATG +
Preference number: 3 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSLLSSS*AHHPPM
Trigger: CATGGGCGGGTGGTGGGCCAAGGAGGAGCTTAGCAA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGGCTGGGCTGCAGACTaGCTAAGCTCCTCCTTGGCC +
Preference number: 3 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSGWAAD*LSSSLA
Trigger: GGCCAAGGAGGAGCTTAGCAAGTCTGCAGCCCAGCC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCCCATGGGAGTGTGTTaGGGCAGAGCAGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSPMGVC*GRAGGT
Trigger: AGTGCCTCCTGCTCTGCCCAAACACACTCCCATGGG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCATCCACTCCAGTGCTaGCCCCATGGGAGTGTGTTT +
Preference number: 3 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPHPLQC*PHGSVF
Trigger: AAACACACTCCCATGGGGCAAGCACTGGAGTGGATG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGGCTGGGCTGCAGACTaGCTAAGCTCCTCCTTGGCC +
Preference number: 3 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQGWAAD*LSSSLA
Trigger: GGCCAAGGAGGAGCTTAGCAAGTCTGCAGCCCAGCC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCCCATGGGAGTGTGTTaGGGCAGAGCAGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRPMGVC*GRAGGT
Trigger: AGTGCCTCCTGCTCTGCCCAAACACACTCCCATGGG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR GCA 72 bp AGGGCGCTGCAGTTCCCCTGGGGAGGACAGTCAGTGTaGCCCACTGGCTATTCAGAATTGAGACCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: RALQFPWGGQSV*PTGYSELRPAS
Trigger: GGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGTCCTCCCCAGGGGAACTGCAGCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGGCTGGGCTGCAGACTaGCTAAGCTCCTCCTTGGCC +
Preference number: 3 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPGWAAD*LSSSLA
Trigger: GGCCAAGGAGGAGCTTAGCAAGTCTGCAGCCCAGCC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR GCA 72 bp CCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATaGAGAGGGGGCAGGCTGAGTGGGAACCTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: PKCQVPVHPLPT*RGGRLSGNLGL
Trigger: CAGGCCAAGGTTCCCACTCAGCCTGCCCCCTCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCATCCACTCCAGTGCTaGCCCCATGGGAGTGTGTTT +
Preference number: 3 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTHPLQC*PHGSVF
Trigger: AAACACACTCCCATGGGGCAAGCACTGGAGTGGATG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR CCA 72 bp ACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATaGAATCCTAAATGCCAAGTCCCAGTACATCCTCTA +
Preference number: 3 (lower is better)
Translates to: TCFPRTFRGWAR*NPKCQVPVHPL
Trigger: TAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGACCCATGGGAGTGTGTTaGGGCAGAGCAGGAGGCACT +
Preference number: 3 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRPMGVC*GRAGGT
Trigger: AGTGCCTCCTGCTCTGCCCAAACACACTCCCATGGG...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR GCA 72 bp AGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATaGCAAGTCCCAGTACATCCTCTACCCACATGCAGA +
Preference number: 3 (lower is better)
Translates to: RTFRGWARWNPK*QVPVHPLPTCR
Trigger: TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR-3UTR CAA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCAACCCCAGGGGCTGTaGTTCAGCCTTGCAGATTGT +
Preference number: 3 (lower is better)
Translates to: HVYLQSALQTSAYASPQPQPQGL*FSLADC
Trigger: ACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
3UTR-3UTR CAA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCACTGGCTATTCAGAATaGAGACCTGCTTCCCCAGGA +
Preference number: 3 (lower is better)
Translates to: HVYLQSALQTSAYASPQPTGYSE*RPASPG
Trigger: TCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGT...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACGTAGACGCCCAGGGTaGCCGGGCTGTGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPRRRPG*PGCARP
Trigger: GGGACGGGCACAGCCCGGGCACCCTGGGCGTCTACG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCGGCCTCGGCCGCTCTaGCCGCGGCCATGCACTGGA +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPRPRPL*PRPCTG
Trigger: TCCAGTGCATGGCCGCGGGCAGAGCGGCCGAGGCCG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGCCAGGAAGCGCCGGTaGCTGATGTGCCGCACGCCC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPARKRR*LMCRTP
Trigger: GGGCGTGCGGCACATCAGCCACCGGCGCTTCCTGGC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCATCGGGCGTGGTGCTCTaGAGCGGGTGCAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPSGVVL*SGCRVT
Trigger: CGTGACCCTGCACCCGCTGCAGAGCACCACGCCCGA...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGGCTCTGGCCAGTACTaGAGGCAGGGCCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPGSGQY*RQGQAE
Trigger: CTCCGCCTGGCCCTGCCTGCAGTACTGGCCAGAGCC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGCGGCTGATGAGGGGTaGCCCAGGGCGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPAADEG*PRAASA
Trigger: GGCACTGGCCGCCCTGGGCCACCCCTCATCAGCCGC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACGGCATCAGGTGGGGTaGAGGCCTTCACGCGCCGGA +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPRHQVG*RPSRAG
Trigger: TCCGGCGCGTGAAGGCCTCCACCCCACCTGATGCCG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCGTCCAGCGGCGGGGTaGCCGAGTTCAGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPRPAAG*PSSASG
Trigger: TCCAGACGCTGAACTCGGTCACCCCGCCGCTGGACG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACCGCAGGTGCCCGGGTaGCAGGGTGGATTCGCACTT +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPPQVPG*QGGFAL
Trigger: AAGTGCGAATCCACCCTGGCACCCGGGCACCTGCGG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCGCACCGCGGCCCTGTaGCGGCCTCAGCAGCACGGT +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSRTAAL*RPQQHG
Trigger: ACCGTGCTGCTGAGGCCGGCACAGGGCCGCGGTGCG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCATGGCCTCAGGTAGACTaGTGGCCGCCAGTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPWPQVD*WPPVRP
Trigger: GGGCCGAACTGGCGGCCAGCAGTCTACCTGAGGCCA...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCCTGGGCACGGGCCATaGTTGGAGCGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSPGHGP*LERRRP
Trigger: CGGGCGGCGACGCTCCAACCATGGCCCGTGCCCAGG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGCCCGGGTGCCAGGGTaGATTCGCACTTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPARVPG*IRTCSH
Trigger: GTGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATCAGCCAGCGGGAAAGTaGCCAGGAAGCGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDQPAGK*PGSAGG
Trigger: GCCACCGGCGCTTCCTGGCCACTTTCCCGCTGGCTG...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGCGCCGCGCGGGGCCTaGGACACACAGCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWAPRGA*DTQRYR
Trigger: CCTGTACCGCTGTGTGTCCCAGGCCCCGCGCGGCGC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAAGCACGCAGCAGCTGTaGGGGCGCGATGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPSTQQL*GRDGSW
Trigger: CCAACTCCCATCGCGCCCCCACAGCTGCTGCGTGCT...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCATGGTGCCAAGGGGCTTaGCCTGAGTCCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPWCQGA*PESPRA
Trigger: GGCTCTGGGGGACTCAGGCCAAGCCCCTTGGCACCA...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGAAGCGCCGGTGGCTaGTGTGCCGCACGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTGSAGG*CAARPP
Trigger: CGGCGGGCGTGCGGCACATCAGCCACCGGCGCTTCC...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGTCCCCGTAGGTGTCTaGGTCCTCCGGCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPVPVGV*VLRPVP
Trigger: CGGTACTGGCCGGAGGACTCAGACACCTACGGGGAC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCCTTCACGCGCCGGATaGAAGCCAGCAGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPPSRAG*KPAAPW
Trigger: CCACGGGGCTGCTGGCTTTCATCCGGCGCGTGAAGG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCCGCAGGTGCCCGGGTaGCAGGGTGGATTCGCACTT +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPPQVPG*QGGFAL
Trigger: AAGTGCGAATCCACCCTGGCACCCGGGCACCTGCGG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGGGCAGGTCCGCAGGTaGCCGGGTGCCAGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSGQVRR*PGARVD
Trigger: ATCCACCCTGGCACCCGGGCACCTGCGGACCTGCCC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGCGGCAGGACGTCCATaGTGCGGTTCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPAAGRP*CGSCRG
Trigger: ACCGCGACAAGAACCGCAGCATGGACGTCCTGCCGC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATTGCCGCACCAGCAGGTaGCCCTCCTGCAACCGAGAG +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDCRTSR*PSCNRE
Trigger: CTCTCGGTTGCAGGAGGGGCACCTGCTGGTGCGGCA...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATCGCAGGAACTGGAAGTaGCGCACCAGCAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDRRNWK*RTSRCP
Trigger: GGGGCACCTGCTGGTGCGGCACTTCCAGTTCCTGCG...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGGCAGTGCACGATGGTaGGCCCATCCCCACTCTCGG +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDGSARW*AHPHSR
Trigger: CCGAGAGTGGGGATGGGCGCACCATCGTGCACTGCC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCGCAGAAGGTGCCGCTaGGTCCTCCCCCGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPRRRCR*VLPRLG
Trigger: GCCTAAACGGGGGAGGACGCAGCGGCACCTTCTGCG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGGCACGGGCCATGGTTaGAGCGTCGCCGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRGTGHG*SVAARP
Trigger: GGGACGGGCGGCGACGCTCCAACCATGGCCCGTGCC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGCCAGCACGAGCGCCTaGGCACGGGCCATGGTTGGA +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPASTSA*ARAMVG
Trigger: TCCAACCATGGCCCGTGCCCAGGCGCTCGTGCTGGC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGGTACGTCGTGGGCCTaGCACGTTCACTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPGTSWA*HVHCRV
Trigger: GACCCGGCAGTGAACGTGCCAGGCCCACGACGTACC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCCTCAGGTAGACTGCTaGCCGCCAGTTCGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPPQVDC*PPVRPR
Trigger: TCGGGGCCGAACTGGCGGCCAGCAGTCTACCTGAGG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCGGCATCAGGTGGGGTaGAGGCCTTCACGCGCCGGA +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPRHQVG*RPSRAG
Trigger: TCCGGCGCGTGAAGGCCTCCACCCCACCTGATGCCG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGTGCCCGCGCTGCAGTaGATGACAATGGGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPVPALQ*MTMGPA
Trigger: TGCCGGGCCCATTGTCATCCACTGCAGCGCGGGCAC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAAGGGGGCAGGCTGAGTaGGAACCTTGGCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPRGQAE*EPWPGM
Trigger: CATCCCAGGCCAAGGTTCCCACTCAGCCTGCCCCCT...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR CAA 72 bp TGCAGGACCCTATGGAGGTGGGGCTGGGCTGCAGACTaGCTAAGCTCCTCCTTGGCCCACCACCCGCCCATG +
Preference number: 4 (lower is better)
Translates to: CRTLWRWGWAAD*LSSSLAHHPPM
Trigger: CATGGGCGGGTGGTGGGCCAAGGAGGAGCTTAGCAAGTCTGCAGCCCAGCCCCACCTCCATAGGGTCCTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGGAAGCGCCGGTGGCTaGTGTGCCGCACGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTGSAGG*CAARPP
Trigger: CGGCGGGCGTGCGGCACATCAGCCACCGGCGCTTCC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCACTGCAGGGTCAGCTaGCGGGCCTGGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPHCRVS*RAWISA
Trigger: TGCTGAGATCCAGGCCCGTCAGCTGACCCTGCAGTG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGCGTCCAGCGGCGGGGTaGCCGAGTTCAGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWRPAAG*PSSASG
Trigger: TCCAGACGCTGAACTCGGTCACCCCGCCGCTGGACG...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGGTGCAGGGTCACGATaGAGGCCGCACTCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDGAGSR*RPHSVC
Trigger: ACACACGGAGTGCGGCCTTCATCGTGACCCTGCACC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCCACAACGGGCAGCCTaGCCAGGAGCCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQPQRAA*PGATGA
Trigger: GGCCCCTGTGGCTCCTGGTCAGGCTGCCCGTTGTGG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACACTGCTGGGTCACTTaGCTCCTCGAAGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPHCWVT*LLEGAA
Trigger: GGCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGGGCAGGTCCGCAGGTaGCCGGGTGCCAGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRGQVRR*PGARVD
Trigger: ATCCACCCTGGCACCCGGGCACCTGCGGACCTGCCC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCGTAGACGCCCAGGGTaGCCGGGCTGTGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFRRRPG*PGCARP
Trigger: GGGACGGGCACAGCCCGGGCACCCTGGGCGTCTACG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCGGCCTCGGCCGCTCTaGCCGCGGCCATGCACTGGA +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFRPRPL*PRPCTG
Trigger: TCCAGTGCATGGCCGCGGGCAGAGCGGCCGAGGCCG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATAGGGCCCGCGCGCCATaGGGTACTCAATCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDRARAP*GTQSPC
Trigger: GCAAGGAGATTGAGTACCGCATGGCGCGCGGGCCCT...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGGCCCTCATGGGCTCTaGGCATTTGGTGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPGPHGL*AFGAAD
Trigger: ATCAGCCGCACCAAATGCGCAGAGCCCATGAGGGCC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACACGCACCGCGGCCCTGTaGCGGCCTCAGCAGCACGGT +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTRTAAL*RPQQHG
Trigger: ACCGTGCTGCTGAGGCCGGCACAGGGCCGCGGTGCG...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGCAACAGGGCGATGCTaGACTCCTCCACGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPATGRC*TPPRPA
Trigger: CGCTGGACGTGGAGGAGTGCAGCATCGCCCTGTTGC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGGGGCAACAGGGCGATaGTGCACTCCTCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPGATGR*CTPPRP
Trigger: TGGACGTGGAGGAGTGCAGCATCGCCCTGTTGCCCC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGTGCTCTGCAGCGGGTaGAGGGTCACGATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPVLCSG*RVTMKA
Trigger: GGCCTTCATCGTGACCCTGCACCCGCTGCAGAGCAC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCAGAAGTCGGGCGTGGTaGTCTGCAGCGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPRSRAW*SAAGAG
Trigger: CCCTGCACCCGCTGCAGAGCACCACGCCCGACTTCT...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATTCCCCACTCTCGGCCTaGCACTTGTCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDSPLSA*HLSTSA
Trigger: GGCTGAGGTGGACAAGTGGCAGGCCGAGAGTGGGGA...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAACAAGCGAAAGGCCCTaGCCACAGTGGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPTSERP*PQWKGE
Trigger: CTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGT...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGAGCCTTTGTCACTCTaGCAGGCAGCACCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPEPLSL*QAAPGL
Trigger: GAGGCCTGGTGCTGCCTGGCAGAGTGACAAAGGCTC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGGGTATGACCAGCCCTaGTCTAACACTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPGYDQP*SNTAPP
Trigger: GGGAGGGGCAGTGTTAGAGCAGGGCTGGTCATACCC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTGCGCCGCGCGGGGCCTaGGACACACAGCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFAPRGA*DTQRYR
Trigger: CCTGTACCGCTGTGTGTCCCAGGCCCCGCGCGGCGC...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACAAAAGCCAGGCCTTTaGGGGCCCTCATGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPQKPGL*GPSWAL
Trigger: CAGAGCCCATGAGGGCCCCCAAAGGCCTGGCTTTTG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACGGAGAACAGGTAGGTaGTGCCTGGGTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPRRTGR*CLGAGW
Trigger: CCAACCTGCACCCAGGCACCACCTACCTGTTCTCCG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCATCTCCTCCGATCTCTaGGACACCTCCAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPISSDL*DTSRGR
Trigger: GCGGCCCCTGGAGGTGTCCCAGAGATCGGAGGAGAT...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGGGGACGCCATGCTCTaGCCACGCTGTGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPGDAML*PRCEVE
Trigger: TTCCACTTCACAGCGTGGCCAGAGCATGGCGTCCCC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCTGCCGGCCTGGCTCTaGCCAGTACTGCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSLPAWL*PVLQAG
Trigger: CCCTGCCTGCAGTACTGGCCAGAGCCAGGCCGGCAG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATTCATCTCCAGGACCGTaGCGCAGGCGCAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDSSPGP*RRRRRC
Trigger: GCACCTTCTGCGCCTGCGCCACGGTCCTGGAGATGA...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGCCCTGAGTGTGCAGTaGGTGCCCCAGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRALSVQ*VPQARA
Trigger: GGCCCTGGCCTGGGGCACCCACTGCACACTCAGGGC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCGTTCTGGCCCGCGTTaGCCTCCACGTCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFRSGPR*PPRRPG
Trigger: GCCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATAGACTCGCCCAGGGGTaGCGGCATGTCGGCATAATC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDRLAQG*RHVGII
Trigger: GATTATGCCGACATGCCGTCACCCCTGGGCGAGTCT...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGCCTCAGCAGCACGGTaGTGGTGTTCTCAGACTCGC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDASAAR*WCSQTR
Trigger: GCGAGTCTGAGAACACCATCACCGTGCTGCTGAGGC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCTCCGGCCAGTACCGTaGGCATTTCACCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPLRPVP*AFHPAH
Trigger: GTGGGCAGGGTGAAATGCTCACGGTACTGGCCGGAG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000460170.2
CDS-3UTR TCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACAGTCTGGATCATGTTaGCACGCCGGGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPQSGSC*HAGSRE
Trigger: CTCTCTGCTCCCGGCGTGTCAACATGATCCAGACTG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCCAAGGGGCTTGGCCTaGGTCCCCCAGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFPRGLA*VPQSQP
Trigger: CGGCTGGCTCTGGGGGACTCAGGCCAAGCCCCTTGG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGCAGAGGGGGCAGGCTaGGTGGGAACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQAEGAG*VGTLAW
Trigger: CCAGGCCAAGGTTCCCACTCAGCCTGCCCCCTCTGC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATCTCCGGCCAGTACCGTaGGCATTTCACCTCGACCAG +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDLRPVP*AFHLDQ
Trigger: CTGGTCGAGGTGAAATGCTCACGGTACTGGCCGGAG...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428026.6
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATTTGCCTCCTCGAAGGTaGAGCCAGCTGCCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDLPPRR*SQLPES
Trigger: AGACTCCGGCAGCTGGCTGCACCTTCGAGGAGGCAA...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCACTGCTGGGTCACTTaGCTCCTCGAAGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPHCWVT*LLEGAA
Trigger: GGCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCGCTGGCCTGGGGCATaGTGGGAAGTGTTGACCATC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPRWPGA*WEVLTI
Trigger: GATGGTCAACACTTCCCAGCATGCCCCAGGCCAGCG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTAGGGTGCCCGGGCTGTaGCCGTCCCGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFRVPGL*PSRLYR
Trigger: CCTGTACAGCCGGGACGGGCACAGCCCGGGCACCCT...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGGTACTCAATCTCCTTaGGCACGATCGGCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDGTQSP*ARSARR
Trigger: GCGACGGGCCGATCGTGCGCAAGGAGATTGAGTACC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGTGGCCTCAGGTAGACTaGTGGCCGCCAGTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWWPQVD*WPPVRP
Trigger: GGGCCGAACTGGCGGCCAGCAGTCTACCTGAGGCCA...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGCAGGACGTCCATGCTaGGGTTCTTGTCGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPAGRPC*GSCRGS
Trigger: GGAACCGCGACAAGAACCGCAGCATGGACGTCCTGC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGCCGCACCAGCAGGTaGCCCTCCTGCAACCGAGAG +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSCRTSR*PSCNRE
Trigger: CTCTCGGTTGCAGGAGGGGCACCTGCTGGTGCGGCA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCCCCCGTTTAGGCAGTaGACGATGGTGCGCCCATCC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPPPFRQ*TMVRPS
Trigger: GGATGGGCGCACCATCGTGCACTGCCTAAACGGGGG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
63% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGAGGTGGGGCTGGGCTaGAGACTTGCTAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDEVGLG*RLAKLL
Trigger: GAGGAGCTTAGCAAGTCTGCAGCCCAGCCCCACCTC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACATCCTCTACCCACATaGAGAGGGGGCAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPHPLPT*RGGRLS
Trigger: ACTCAGCCTGCCCCCTCTGCATGTGGGTAGAGGATG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCTGCCGCACCAGCAGGTaGCCCTCCCGAGAGATGTTC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPCRTSR*PSREMF
Trigger: GAACATCTCTCGGGAGGGGCACCTGCTGGTGCGGCA...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460170.2
CDS-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGGCACGGGCCATGGTTaGAGCGTCGCCGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIGTGHG*SVAARP
Trigger: GGGACGGGCGGCGACGCTCCAACCATGGCCCGTGCC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATCTCTGGAAGATGACATaGGCTCGCTGGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDLWKMT*ARWPGA
Trigger: TGCCCCAGGCCAGCGAGCCCATGTCATCTTCCAGAG...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGTAGCCCCTGCGGTCTaGGGAGATGAGGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDVAPAV*GDEGLK
Trigger: TTTGAGGCCCTCATCTCCCCAGACCGCAGGGGCTAC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCAGGCGGGAGAAGTGTaGGGCCTTTGCGCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPQAGEV*GLCAGV
Trigger: TACCCCTGCGCAAAGGCCCCACACTTCTCCCGCCTG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGCCAGGAAGCGCCGGTaGCTGATGTGCCGCACGCCC +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTARKRR*LMCRTP
Trigger: GGGCGTGCGGCACATCAGCCACCGGCGCTTCCTGGC...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCAGCCAGCGGGAAAGTaGCCAGGAAGCGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRQPAGK*PGSAGG
Trigger: GCCACCGGCGCTTCCTGGCCACTTTCCCGCTGGCTG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGCGCCGCGCGGGGCCTaGGACACACAGCGGTACAGG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTAPRGA*DTQRYR
Trigger: CCTGTACCGCTGTGTGTCCCAGGCCCCGCGCGGCGC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGAGCACGCAGCAGCTGTaGGGGCGCGATGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWSTQQL*GRDGSW
Trigger: CCAACTCCCATCGCGCCCCCACAGCTGCTGCGTGCT...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGCGGCTGATGAGGGGTaGCCCAGGGCGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTAADEG*PRAASA
Trigger: GGCACTGGCCGCCCTGGGCCACCCCTCATCAGCCGC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCTTTGGGGGCCCTCATaGGCTCTGCGCATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPLWGPS*ALRIWC
Trigger: GCACCAAATGCGCAGAGCCCATGAGGGCCCCCAAAG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGGAGATGGTACGTCGTaGGCCTGGCACGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDGDGTS*AWHVHC
Trigger: GCAGTGAACGTGCCAGGCCCACGACGTACCATCTCC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCTGCGGAGCTTGGAGATaGTACGTCGTGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPCGAWR*YVVGLA
Trigger: TGCCAGGCCCACGACGTACCATCTCCAAGCTCCGCA...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACAGGTAGGTGGTGCCTaGGTGCAGGTTGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPQVGGA*VQVGED
Trigger: GTCTTCTCCAACCTGCACCCAGGCACCACCTACCTG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCGGAGAACAGGTAGGTaGTGCCTGGGTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPRRTGR*CLGAGW
Trigger: CCAACCTGCACCCAGGCACCACCTACCTGTTCTCCG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACGCCTCGAAGGTCAATaGCACTGGGAAGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPRLEGQ*HWEAVL
Trigger: CAGGACTGCTTCCCAGTGCCATTGACCTTCGAGGCG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGTGCCCGCGCTGCAGTaGATGACAATGGGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSVPALQ*MTMGPA
Trigger: TGCCGGGCCCATTGTCATCCACTGCAGCGCGGGCAC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACCATGGGAGTGTGTTTaGGCAGAGCAGGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPPWECV*AEQEAL
Trigger: CAGTGCCTCCTGCTCTGCCCAAACACACTCCCATGG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACTATGGAGGTGGGGCTaGGCTGCAGACTTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPLWRWG*AADLLS
Trigger: GCTTAGCAAGTCTGCAGCCCAGCCCCACCTCCATAG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCAGGACCCTATGGAGGTaGGGCTGGGCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPRTLWR*GWAADL
Trigger: CAAGTCTGCAGCCCAGCCCCACCTCCATAGGGTCCT...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGGTGCCAAGGGGCTTaGCCTGAGTCCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSWCQGA*PESPRA
Trigger: GGCTCTGGGGGACTCAGGCCAAGCCCCTTGGCACCA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGTGGGAACCTTGGCCTaGGATGCTCTCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPVGTLA*DALCRA
Trigger: GGCCCTGCAGAGAGCATCCCAGGCCAAGGTTCCCAC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGTCAGCCTGGTGCCACTaGCGGCCGTGGGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQSAWCH*RPWDPV
Trigger: GACTGGATCCCACGGCCGTCAGTGGCACCAGGCTGA...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACATCCGTCTGGAAAGTaGCCTCCTTGCCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPHPSGK*PPCPLC
Trigger: GCAAAGAGGGCAAGGAGGTCACTTTCCAGACGGATG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCCGCGCTGCAGTGGATaGCAATGGGCCCGGCATCAG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRPRCSG*QWARHQ
Trigger: CTGATGCCGGGCCCATTGTCATCCACTGCAGCGCGG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCAGAGCCAGCCGTCCTaGGCCTTTGTCACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPQSQPS*AFVTLP
Trigger: TGGCAGAGTGACAAAGGCTCAGGACGGCTGGCTCTG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCCAAGGGGCTTGGCCTaGGTCCCCCAGAGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTPRGLA*VPQSQP
Trigger: CGGCTGGCTCTGGGGGACTCAGGCCAAGCCCCTTGG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGTCACTGGCCCAAGCTaGGCAGGACAGGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSVTGPS*AGQASE
Trigger: CTCACTGGCCTGTCCTGCTCAGCTTGGGCCAGTGAC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCCACAACGGGCAGCCTaGCCAGGAGCCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIPQRAA*PGATGA
Trigger: GGCCCCTGTGGCTCCTGGTCAGGCTGCCCGTTGTGG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACCACAACGGGCAGCCTaGCCAGGAGCCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKPQRAA*PGATGA
Trigger: GGCCCCTGTGGCTCCTGGTCAGGCTGCCCGTTGTGG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCCGCAGGTGCCCGGGTaGCAGGGTGGATTCGCACTT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRPQVPG*QGGFAL
Trigger: AAGTGCGAATCCACCCTGGCACCCGGGCACCTGCGG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGGGCAGGTCCGCAGGTaGCCGGGTGCCAGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPGQVRR*PGARVD
Trigger: ATCCACCCTGGCACCCGGGCACCTGCGGACCTGCCC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAAGGGTGCCCGGGCTGTaGCCGTCCCGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKRVPGL*PSRLYR
Trigger: CCTGTACAGCCGGGACGGGCACAGCCCGGGCACCCT...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGCTCTGCCCGCGGCCATaGACTGGAACGACGCGTTCT +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWLCPRP*TGTTRS
Trigger: AGAACGCGTCGTTCCAGTGCATGGCCGCGGGCAGAG...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGGTACTCAATCTCCTTaGGCACGATCGGCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPGTQSP*ARSARR
Trigger: GCGACGGGCCGATCGTGCGCAAGGAGATTGAGTACC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGGTCAGGGACTCGGCTaGAATCCCACTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPGQGLG*NPTGHI
Trigger: GATGTGCCCAGTGGGATTGCAGCCGAGTCCCTGACC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCGAAGCCTTTGCCTGTaGGGGCCCGCACGGAGAACA +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSRSLCL*GPARRT
Trigger: TGTTCTCCGTGCGGGCCCGCACAGGCAAAGGCTTCG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCCTGGCCGAAGCCTTTaGCTGTGCGGGCCCGCACGG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTPGRSL*LCGPAR
Trigger: CCGTGCGGGCCCGCACAGGCAAAGGCTTCGGCCAGG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCCTGGCCGAAGCCTTTaGCTGTGCGGGCCCGCACGG +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIPGRSL*LCGPAR
Trigger: CCGTGCGGGCCCGCACAGGCAAAGGCTTCGGCCAGG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCCCTGGCCGAAGCCTTTaGCTGTGCGGGCCCGCACGG +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPPGRSL*LCGPAR
Trigger: CCGTGCGGGCCCGCACAGGCAAAGGCTTCGGCCAGG...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGGTTATCTCAGTGAGTaGCGCCTGGCCGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPGYLSE*RLAEAF
Trigger: AAAGGCTTCGGCCAGGCGGCACTCACTGAGATAACC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACAGCTTTCCTGGCAATaGGGATGCAATTCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPQLSWQ*GCNSAG
Trigger: CCCGGCTGAATTGCATCCGCATTGCCAGGAAAGCTG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGACACGCACCGCAGGGTaGAGCTGCCCCGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWTRTAG*SCPVWY
Trigger: ATACCACACGGGGCAGCTGCACCCTGCGGTGCGTGT...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGCAGGACGTCCATGCTaGGGTTCTTGTCGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPAGRPC*GSCRGS
Trigger: GGAACCGCGACAAGAACCGCAGCATGGACGTCCTGC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGAGAAGTCGGGCGTGGTaGTCTGCAGCGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQRSRAW*SAAGAG
Trigger: CCCTGCACCCGCTGCAGAGCACCACGCCCGACTTCT...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGGCAGTGCACGATGGTaGGCCCATCCCCACTCTCGG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRGSARW*AHPHSR
Trigger: CCGAGAGTGGGGATGGGCGCACCATCGTGCACTGCC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCGCAGAAGGTGCCGCTaGGTCCTCCCCCGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQRRRCR*VLPRLG
Trigger: GCCTAAACGGGGGAGGACGCAGCGGCACCTTCTGCG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCGCAGGCGCAGAAGGTaGCGCTGCGTCCTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIRRRRR*RCVLPR
Trigger: ACGGGGGAGGACGCAGCGGCACCTTCTGCGCCTGCG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCCGCAGGCGCAGAAGGTaGCGCTGCGTCCTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPRRRRR*RCVLPR
Trigger: ACGGGGGAGGACGCAGCGGCACCTTCTGCGCCTGCG...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACGCAGGCGCAGAAGGTaGCGCTGCGTCCTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKRRRRR*RCVLPR
Trigger: ACGGGGGAGGACGCAGCGGCACCTTCTGCGCCTGCG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGAGCCTTTGTCACTCTaGCAGGCAGCACCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPEPLSL*QAAPGL
Trigger: GAGGCCTGGTGCTGCCTGGCAGAGTGACAAAGGCTC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGCCTGGGATGCTCTCTaGAGGGCCTCACTCATCCCT +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPAWDAL*RASLIP
Trigger: AGGGATGAGTGAGGCCCTGCAGAGAGCATCCCAGGC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGGGTATGACCAGCCCTaGTCTAACACTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPGYDQP*SNTAPP
Trigger: GGGAGGGGCAGTGTTAGAGCAGGGCTGGTCATACCC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCTCCCGAGAGATGTTCTaGACCCGGAAGACTCGAGCC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPSREMF*TRKTRA
Trigger: GGCTCGAGTCTTCCGGGTGCAGAACATCTCTCGGGA...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCGCACTTGCTCCCACTaGAAGTCATCGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPRTCSH*KSSYWA
Trigger: GGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGCCCGGGTGCCAGGGTaGATTCGCACTTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRARVPG*IRTCSH
Trigger: GTGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCATGGGCTCGCTGGCCTaGGGCATGCTGGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPMGSLA*GMLGSV
Trigger: AACACTTCCCAGCATGCCCCAGGCCAGCGAGCCCAT...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGGGCGCGATGGGAGTTaGGGGCTCCTTGACGATGAG +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWGRDGS*GLLDDE
Trigger: CTCATCGTCAAGGAGCCCCCAACTCCCATCGCGCCC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCTTTGGGGGCCCTCATaGGCTCTGCGCATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPLWGPS*ALRIWC
Trigger: GCACCAAATGCGCAGAGCCCATGAGGGCCCCCAAAG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCGGCTGCAATCCCACTaGGCACATCCTCATCCGTCT +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPRLQSH*AHPHPS
Trigger: AGACGGATGAGGATGTGCCCAGTGGGATTGCAGCCG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCCTCAGGTAGACTGCTaGCCGCCAGTTCGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRPQVDC*PPVRPR
Trigger: TCGGGGCCGAACTGGCGGCCAGCAGTCTACCTGAGG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACTTCCTAGGCTCAAGTaGTGGGTTCCAGAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPLPRLK*WVPEAS
Trigger: CGAGGCTTCTGGAACCCACCACTTGAGCCTAGGAAG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCATCATAGGCAGGCATTaGCTCCTGCCGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPIIGRH*LLPAAL
Trigger: AAGGGCAGCCGGCAGGAGCCAATGCCTGCCTATGAT...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATATCATAGGCAGGCATTaGCTCCTGCCGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDIIGRH*LLPAAL
Trigger: AAGGGCAGCCGGCAGGAGCCAATGCCTGCCTATGAT...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGTGCCCGCGCTGCAGTaGATGACAATGGGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRVPALQ*MTMGPA
Trigger: TGCCGGGCCCATTGTCATCCACTGCAGCGCGGGCAC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATACCGAGTTCAGCGTCTaGAACTCTTCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDTEFSV*NSSRSW
Trigger: CCAGCTGCGGGAAGAGTTCCAGACGCTGAACTCGGT...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCTGCCGGCCTGGCTCTaGCCAGTACTGCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFLPAWL*PVLQAG
Trigger: CCCTGCCTGCAGTACTGGCCAGAGCCAGGCCGGCAG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGACCAGCGCAGGAACTaGAAGTGCCGCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSDQRRN*KCRTSR
Trigger: CCTGCTGGTGCGGCACTTCCAGTTCCTGCGCTGGTC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATTTAGGCAGTGCACGATaGTGCGCCCATCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDLGSAR*CAHPHS
Trigger: AGAGTGGGGATGGGCGCACCATCGTGCACTGCCTAA...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGTCATCTCCAGGACCGTaGCGCAGGCGCAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWSSPGP*RRRRRC
Trigger: GCACCTTCTGCGCCTGCGCCACGGTCCTGGAGATGA...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATCCATGGGAGTGTGTTTaGGCAGAGCAGGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDPWECV*AEQEAL
Trigger: CAGTGCCTCCTGCTCTGCCCAAACACACTCCCATGG...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTGGTGCCAAGGGGCTTaGCCTGAGTCCCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRWCQGA*PESPRA
Trigger: GGCTCTGGGGGACTCAGGCCAAGCCCCTTGGCACCA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCTGCCAAAAGCCAGGATaGTGCCAAGGGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPCQKPG*CQGAWP
Trigger: AGGCCAAGCCCCTTGGCACCATCCTGGCTTTTGGCA...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGGAAGCGCCGGTGGCTaGTGTGCCGCACGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRGSAGG*CAARPP
Trigger: CGGCGGGCGTGCGGCACATCAGCCACCGGCGCTTCC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCACTGCAGGGTCAGCTaGCGGGCCTGGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRHCRVS*RAWISA
Trigger: TGCTGAGATCCAGGCCCGTCAGCTGACCCTGCAGTG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCACTGCAGGGTCAGCTaGCGGGCCTGGATCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQHCRVS*RAWISA
Trigger: TGCTGAGATCCAGGCCCGTCAGCTGACCCTGCAGTG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCCTGCCGGCTGCCCTTaGCCTTGTCTTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPPAGCP*PCLSSL
Trigger: CAAAGAAGAAAGACAAGGTCAAGGGCAGCCGGCAGG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTGTCCCCGTAGGTGTCTaGGTCCTCCGGCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFVPVGV*VLRPVP
Trigger: CGGTACTGGCCGGAGGACTCAGACACCTACGGGGAC...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCCTTCACGCGCCGGATaGAAGCCAGCAGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTPSRAG*KPAAPW
Trigger: CCACGGGGCTGCTGGCTTTCATCCGGCGCGTGAAGG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACCTTCACGCGCCGGATaGAAGCCAGCAGCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKPSRAG*KPAAPW
Trigger: CCACGGGGCTGCTGGCTTTCATCCGGCGCGTGAAGG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGAGGGCCCCGCTATCTTaGCTCCAGCCCCTCCAAGTA +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWRAPLS*LQPLQV
Trigger: TACTTGGAGGGGCTGGAGTCAAGATAGCGGGGCCCT...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGCAGAGGGGGCAGGCTaGGTGGGAACCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIAEGAG*VGTLAW
Trigger: CCAGGCCAAGGTTCCCACTCAGCCTGCCCCCTCTGC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAAGCAGGACAGGCCAGTaGGGCCTGAAGATTAAAGGA +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPSRTGQ*GLKIKG
Trigger: TCCTTTAATCTTCAGGCCTCACTGGCCTGTCCTGCT...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCACTGCTGGGTCACTTaGCTCCTCGAAGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSHCWVT*LLEGAA
Trigger: GGCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGTACTCGCAGGGCACTaGTGGGTCACTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSVLAGH*WVTCLL
Trigger: GAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTAC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACAGCGGTACAGGTCCTaGTCGGCGCGGCTCACGGCA +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKQRYRS*SARLTA
Trigger: TGCCGTGAGCCGCGCCGAGCAGGACCTGTACCGCTG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCAGCGGTACAGGTCCTaGTCGGCGCGGCTCACGGCA +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIQRYRS*SARLTA
Trigger: TGCCGTGAGCCGCGCCGAGCAGGACCTGTACCGCTG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGGCCCTCATGGGCTCTaGGCATTTGGTGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSGPHGL*AFGAAD
Trigger: ATCAGCCGCACCAAATGCGCAGAGCCCATGAGGGCC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCTGGTCTGGTTGTGGCTaGTGCCCAGGGTGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPWSGCG*CPGCSD
Trigger: ATCACTACACCCTGGGCAGCAGCCACAACCAGACCA...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCGAAGCCTTTGCCTGTaGGGGCCCGCACGGAGAACA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRRSLCL*GPARRT
Trigger: TGTTCTCCGTGCGGGCCCGCACAGGCAAAGGCTTCG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGCTGGTCTCCCCGGGTaGTGTAGCCATGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRAGLPG*CSHGCP
Trigger: TGGACACCCATGGCTACAGCACCCGGGGAGACCAGC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGACGCCCTCACACTCTaGCATGTCCAGCATCACATC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPDALTL*HVQHHI
Trigger: GATGTGATGCTGGACATGGCAGAGTGTGAGGGCGTC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGCGGCAGGACGTCCATaGTGCGGTTCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRAAGRP*CGSCRG
Trigger: ACCGCGACAAGAACCGCAGCATGGACGTCCTGCCGC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCTCGGGCGTGGTGCTCTaGAGCGGGTGCAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTSGVVL*SGCRVT
Trigger: CGTGACCCTGCACCCGCTGCAGAGCACCACGCCCGA...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGGCTCTGGCCAGTACTaGAGGCAGGGCCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTGSGQY*RQGQAE
Trigger: CTCCGCCTGGCCCTGCCTGCAGTACTGGCCAGAGCC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTCCATGAGGCCATATTaGTGCCGGCCTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSSMRPY*CRPGSG
Trigger: GCCAGAGCCAGGCCGGCAGCAATATGGCCTCATGGA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGTCCATGAGGCCATATTaGTGCCGGCCTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWSMRPY*CRPGSG
Trigger: GCCAGAGCCAGGCCGGCAGCAATATGGCCTCATGGA...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATAACCGAGAGATGTTCTaGACCCGGAAGACTCGAGCC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDNREMF*TRKTRA
Trigger: GGCTCGAGTCTTCCGGGTGCAGAACATCTCTCGGTT...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAATCCACTCCAGTGCTTaGCCCATGGGAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPIHSSA*PMGVCL
Trigger: CAAACACACTCCCATGGGGCAAGCACTGGAGTGGAT...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCACAAGCGAAAGGCCCTaGCCACAGTGGAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSTSERP*PQWKGE
Trigger: CTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGT...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCAAAAGCCAGGATGGTaGCAAGGGGCTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPQKPGW*QGAWPE
Trigger: CTCAGGCCAAGCCCCTTGGCACCATCCTGGCTTTTG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGGGTATGACCAGCCCTaGTCTAACACTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWGYDQP*SNTAPP
Trigger: GGGAGGGGCAGTGTTAGAGCAGGGCTGGTCATACCC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGCTCGCAGGGCACTGCTaGGTCACTTGCCTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWLAGHC*VTCLLE
Trigger: TTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAG...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGATGACATGGGCTCGCTaGCCTGGGGCATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWMTWAR*PGACWE
Trigger: TTCCCAGCATGCCCCAGGCCAGCGAGCCCATGTCAT...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATTTCTCGCTCAGGCTCTaGAAGATGACATGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDFSLRL*KMTWAR
Trigger: GCGAGCCCATGTCATCTTCCAGAGCCTGAGCGAGAA...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTGGAACGACGCGTTCTaGCCCGCGTTGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRWNDAF*PALTST
Trigger: CGTGGAGGTCAACGCGGGCCAGAACGCGTCGTTCCA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCCCGCGGCCATGCACTaGAACGACGCGTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTPAAMH*NDAFWP
Trigger: GGGCCAGAACGCGTCGTTCCAGTGCATGGCCGCGGG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACCCGCGGCCATGCACTaGAACGACGCGTTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKPAAMH*NDAFWP
Trigger: GGGCCAGAACGCGTCGTTCCAGTGCATGGCCGCGGG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACAGCCAGCGGGAAAGTaGCCAGGAAGCGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKQPAGK*PGSAGG
Trigger: GCCACCGGCGCTTCCTGGCCACTTTCCCGCTGGCTG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATTCTCATTGCGGAGCTTaGAGATGGTACGTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDSHCGA*RWYVVG
Trigger: GCCCACGACGTACCATCTCCAAGCTCCGCAATGAGA...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGTCAGTGAGTGCCGCCTaGCCGAAGCCTTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWSVSAA*PKPLPV
Trigger: CACAGGCAAAGGCTTCGGCCAGGCGGCACTCACTGA...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATCCTAGGCTCAAGTGGTaGGTTCCAGAAGCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDPRLKW*VPEASV
Trigger: TACCGAGGCTTCTGGAACCCACCACTTGAGCCTAGG...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATCTTCCTAGGCTCAAGTaGTGGGTTCCAGAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDLPRLK*WVPEAS
Trigger: CGAGGCTTCTGGAACCCACCACTTGAGCCTAGGAAG...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGCTGTGAAGTGGAACTaGCGGACCTCGTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRAVKWN*RTSCRA
Trigger: TGCCCGGCACGAGGTCCGCCAGTTCCACTTCACAGC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACGGCATCAGGTGGGGTaGAGGCCTTCACGCGCCGGA +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKRHQVG*RPSRAG
Trigger: TCCGGCGCGTGAAGGCCTCCACCCCACCTGATGCCG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGCCAGAAGTCGGGCGTaGTGCTCTGCAGCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTARSRA*CSAAGA
Trigger: TGCACCCGCTGCAGAGCACCACGCCCGACTTCTGGC...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACTGCCGGCCTGGCTCTaGCCAGTACTGCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKLPAWL*PVLQAG
Trigger: CCCTGCCTGCAGTACTGGCCAGAGCCAGGCCGGCAG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCTTAGGCAGTGCACGATaGTGCGCCCATCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPLGSAR*CAHPHS
Trigger: AGAGTGGGGATGGGCGCACCATCGTGCACTGCCTAA...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCAGGCCCTGCCCACAGTaGAAGGGGGAGCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSRPCPQ*KGEQDS
Trigger: GCTATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCT...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCCCACCACCCGCCCATaGGACAAGCGAAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFPTTRP*DKRKAL
Trigger: CAGGGCCTTTCGCTTGTCCCATGGGCGGGTGGTGGG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAAGGACCTTCAGGGGCTaGGCCAGATGGAATCCTAAA +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPRTFRG*ARWNPK
Trigger: TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCT...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGCGCTGCAGTTCCCCTaGGGAGGACAGTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQALQFP*GGQSVC
Trigger: GCACACTGACTGTCCTCCCCAGGGGAACTGCAGCGC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
3UTR CAA 72 bp AGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTaGCCCCATGGGAGTGTGTTTGGGCAGAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RGSKIAQHPLQC*PHGSVFGQSRR
Trigger: CCTCCTGCTCTGCCCAAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCGCAGAGCTGGAAGGTaGGTGCCAGCACGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIRRAGR*VPARAP
Trigger: AGGCGCTCGTGCTGGCACTCACCTTCCAGCTCTGCG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACGCAGAGCTGGAAGGTaGGTGCCAGCACGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKRRAGR*VPARAP
Trigger: AGGCGCTCGTGCTGGCACTCACCTTCCAGCTCTGCG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATTTGCGCAGGGGTAGCTaGGAAGCAGGATGTCATCTA +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDLRRGS*EAGCHL
Trigger: TAGATGACATCCTGCTTCTCAGCTACCCCTGCGCAA...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCTGTAGGTCTGCAGGCTaGCGGCGTGCACCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYICRSAG*RRAPQP
Trigger: GGGCTGAGGTGCACGCCGTCAGCCTGCAGACCTACA...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGGGGCTCCTCCCACTTaGGGAAGATCATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSGAPPT*GRSCPP
Trigger: TGGAGGACATGATCTTCCTCAAGTGGGAGGAGCCCC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGGGGCTCCTCCCACTTaGGGAAGATCATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWGAPPT*GRSCPP
Trigger: TGGAGGACATGATCTTCCTCAAGTGGGAGGAGCCCC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGAGACTCGCCCAGGGGTaGCGGCATGTCGGCATAATC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQRLAQG*RHVGII
Trigger: GATTATGCCGACATGCCGTCACCCCTGGGCGAGTCT...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCCGCGCTGCAGTGGATaGCAATGGGCCCGGCATCAG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTPRCSG*QWARHQ
Trigger: CTGATGCCGGGCCCATTGTCATCCACTGCAGCGCGG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCCCGCGCTGCAGTGGATaGCAATGGGCCCGGCATCAG +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPPRCSG*QWARHQ
Trigger: CTGATGCCGGGCCCATTGTCATCCACTGCAGCGCGG...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCAGAGCAGGAGGCACTaGTCTTCCTCGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQQSRRH*SSSPVQ
Trigger: CTGGACTGGCGAGGAAGATCAGTGCCTCCTGCTCTG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCTCCTACCTCTTCCTCTaGACTCCAGAGGGTATGACC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPSYLFL*TPEGMT
Trigger: GGTCATACCCTCTGGAGTTCAGAGGAAGAGGTAGGA...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCGCTGGCCTGGGGCATaGTGGGAAGTGTTGACCATC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRRWPGA*WEVLTI
Trigger: GATGGTCAACACTTCCCAGCATGCCCCAGGCCAGCG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGACGTAGACGCCCAGGGTaGCCGGGCTGTGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRRRRPG*PGCARP
Trigger: GGGACGGGCACAGCCCGGGCACCCTGGGCGTCTACG...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACACTCTGCCCGCGGCCATaGACTGGAACGACGCGTTCT +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTLCPRP*TGTTRS
Trigger: AGAACGCGTCGTTCCAGTGCATGGCCGCGGGCAGAG...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGACGGCCTCGGCCGCTCTaGCCGCGGCCATGCACTGGA +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRRPRPL*PRPCTG
Trigger: TCCAGTGCATGGCCGCGGGCAGAGCGGCCGAGGCCG...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGGTCAGGGACTCGGCTaGAATCCCACTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRGQGLG*NPTGHI
Trigger: GATGTGCCCAGTGGGATTGCAGCCGAGTCCCTGACC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGACGCACCGCGGCCCTGTaGCGGCCTCAGCAGCACGGT +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRRTAAL*RPQQHG
Trigger: ACCGTGCTGCTGAGGCCGGCACAGGGCCGCGGTGCG...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCAGCTTTCCTGGCAATaGGGATGCAATTCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPQLSWQ*GCNSAG
Trigger: CCCGGCTGAATTGCATCCGCATTGCCAGGAAAGCTG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCCTCCAGGGGCCGCTTaGTTTCCTTGCAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRPPGAA*FPCRQL
Trigger: AAGCTGCCTGCAAGGAAAGCAAGCGGCCCCTGGAGG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCCTCCAGGGGCCGCTTaGTTTCCTTGCAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQPPGAA*FPCRQL
Trigger: AAGCTGCCTGCAAGGAAAGCAAGCGGCCCCTGGAGG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGTCTCCCAGCATCGGGTaGAGTTTCACTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWSPSIG*SFTRCR
Trigger: TCGGCACCGAGTGAAACTGCACCCGATGCTGGGAGA...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTCTCCCAGCATCGGGTaGAGTTTCACTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSSPSIG*SFTRCR
Trigger: TCGGCACCGAGTGAAACTGCACCCGATGCTGGGAGA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCTGGAACAGTGCTCCTaGCACACCATACGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPLEQCS*HTIRQK
Trigger: CTTCTGGCGTATGGTGTGGCAGGAGCACTGTTCCAG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCGATATAGCAACCTGTaGGGCCGGTGCCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIRYSNL*GRCPRC
Trigger: GCAGCGCGGGCACCGGCCGCACAGGTTGCTATATCG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCGATATAGCAACCTGTaGGGCCGGTGCCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTRYSNL*GRCPRC
Trigger: GCAGCGCGGGCACCGGCCGCACAGGTTGCTATATCG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGACGCCCTCACACTCTaGCATGTCCAGCATCACATC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPDALTL*HVQHHI
Trigger: GATGTGATGCTGGACATGGCAGAGTGTGAGGGCGTC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTGCAACAGGGCGATGCTaGACTCCTCCACGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFATGRC*TPPRPA
Trigger: CGCTGGACGTGGAGGAGTGCAGCATCGCCCTGTTGC...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTGGGGCAACAGGGCGATaGTGCACTCCTCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFGATGR*CTPPRP
Trigger: TGGACGTGGAGGAGTGCAGCATCGCCCTGTTGCCCC...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTGCGGCAGGACGTCCATaGTGCGGTTCTTGTCGCGGT +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFAAGRP*CGSCRG
Trigger: ACCGCGACAAGAACCGCAGCATGGACGTCCTGCCGC...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGATGAGGCCATATTGCTaGCGGCCTGGCTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRMRPYC*RPGSGQ
Trigger: CTGGCCAGAGCCAGGCCGGCAGCAATATGGCCTCAT...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCGCAGGAACTGGAAGTaGCGCACCAGCAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIRRNWK*RTSRCP
Trigger: GGGGCACCTGCTGGTGCGGCACTTCCAGTTCCTGCG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGAGGTGTGTCCCGGTATaGAGACCAGCGCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWRCVPV*RPAQEL
Trigger: CAGTTCCTGCGCTGGTCTGCATACCGGGACACACCT...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACATCCCCACTCTCGGCCTaGCACTTGTCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTSPLSA*HLSTSA
Trigger: GGCTGAGGTGGACAAGTGGCAGGCCGAGAGTGGGGA...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGGCAGTGCACGATGGTaGGCCCATCCCCACTCTCGG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTGSARW*AHPHSR
Trigger: CCGAGAGTGGGGATGGGCGCACCATCGTGCACTGCC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCTCTCAGCACAGGCCTaGAGGACCCTATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRLSAQA*RTLWRW
Trigger: CCACCTCCATAGGGTCCTGCAGGCCTGTGCTGAGAG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGGCCTCACTCATCCCTaGCAAAAGCCAGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSGLTHP*QKPGWC
Trigger: GCACCATCCTGGCTTTTGGCAGGGATGAGTGAGGCC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGCCTGGGATGCTCTCTaGAGGGCCTCACTCATCCCT +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQAWDAL*RASLIP
Trigger: AGGGATGAGTGAGGCCCTGCAGAGAGCATCCCAGGC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCATCCTCTACCCACATaGAGAGGGGGCAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSHPLPT*RGGRLS
Trigger: ACTCAGCCTGCCCCCTCTGCATGTGGGTAGAGGATG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCATTCAGAATTGAGACCTaGTTCCCCAGGACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPFRIET*FPRTFR
Trigger: CCTGAAGGTCCTGGGGAAGCAGGTCTCAATTCTGAA...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGGAGGACAGTCAGTGTaGCCCACTGGCTATTCAGAA +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPGGQSV*PTGYSE
Trigger: TTCTGAATAGCCAGTGGGGCACACTGACTGTCCTCC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGGAGGACAGTCAGTGTaGCCCACTGGCTATTCAGAA +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDGGQSV*PTGYSE
Trigger: TTCTGAATAGCCAGTGGGGCACACTGACTGTCCTCC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGACCTGGGCACGGGCCATaGTTGGAGCGTCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRPGHGP*LERRRP
Trigger: CGGGCGGCGACGCTCCAACCATGGCCCGTGCCCAGG...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCTCGCAGGGCACTGCTaGGTCACTTGCCTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQLAGHC*VTCLLE
Trigger: TTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGTCATCGTACTGGGCCTaGCTGTACTCGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWSSYWA*LYSQGT
Trigger: AGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGA...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGCCCGGGTGCCAGGGTaGATTCGCACTTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKARVPG*IRTCSH
Trigger: GTGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCTCTGGAAGATGACATaGGCTCGCTGGCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQLWKMT*ARWPGA
Trigger: TGCCCCAGGCCAGCGAGCCCATGTCATCTTCCAGAG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGCGCGATGGGAGTTaGGGGCTCCTTGACGATGAG +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTGRDGS*GLLDDE
Trigger: CTCATCGTCAAGGAGCCCCCAACTCCCATCGCGCCC...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAAGCACGCAGCAGCTGTaGGGGCGCGATGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKSTQQL*GRDGSW
Trigger: CCAACTCCCATCGCGCCCCCACAGCTGCTGCGTGCT...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCAAAAGCCAGGCCTTTaGGGGCCCTCATGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRQKPGL*GPSWAL
Trigger: CAGAGCCCATGAGGGCCCCCAAAGGCCTGGCTTTTG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGCGGCTGCAATCCCACTaGGCACATCCTCATCCGTCT +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWRLQSH*AHPHPS
Trigger: AGACGGATGAGGATGTGCCCAGTGGGATTGCAGCCG...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGATCATGTCCTCCAGTaGAGTGAAGGTCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPDHVLQ*SEGQGL
Trigger: GAGTCCCTGACCTTCACTCCACTGGAGGACATGATC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGATCATGTCCTCCAGTaGAGTGAAGGTCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDDHVLQ*SEGQGL
Trigger: GAGTCCCTGACCTTCACTCCACTGGAGGACATGATC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGGTACGTCGTGGGCCTaGCACGTTCACTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKGTSWA*HVHCRV
Trigger: GACCCGGCAGTGAACGTGCCAGGCCCACGACGTACC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTGCGGAGCTTGGAGATaGTACGTCGTGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRCGAWR*YVVGLA
Trigger: TGCCAGGCCCACGACGTACCATCTCCAAGCTCCGCA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGTCAGTGAGTGCCGCCTaGCCGAAGCCTTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQSVSAA*PKPLPV
Trigger: CACAGGCAAAGGCTTCGGCCAGGCGGCACTCACTGA...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTCAGTGAGTGCCGCCTaGCCGAAGCCTTTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRSVSAA*PKPLPV
Trigger: CACAGGCAAAGGCTTCGGCCAGGCGGCACTCACTGA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGAAGGTCAATGGCACTaGGAAGCAGTCCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPEGQWH*EAVLST
Trigger: GGTGGACAGGACTGCTTCCCAGTGCCATTGACCTTC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCGCCTCGAAGGTCAATaGCACTGGGAAGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSRLEGQ*HWEAVL
Trigger: CAGGACTGCTTCCCAGTGCCATTGACCTTCGAGGCG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTGCTGTGAAGTGGAACTaGCGGACCTCGTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFAVKWN*RTSCRA
Trigger: TGCCCGGCACGAGGTCCGCCAGTTCCACTTCACAGC...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCTACTGCTCCTCAGTCTaGATCATGTTGACACGCCGG +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPYCSSV*IMLTRR
Trigger: CCGGCGTGTCAACATGATCCAGACTGAGGAGCAGTA...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGCCAGAAGTCGGGCGTaGTGCTCTGCAGCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKARSRA*CSAAGA
Trigger: TGCACCCGCTGCAGAGCACCACGCCCGACTTCTGGC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGCCAGAAGTCGGGCGTaGTGCTCTGCAGCGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPARSRA*CSAAGA
Trigger: TGCACCCGCTGCAGAGCACCACGCCCGACTTCTGGC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGACCAGCGCAGGAACTaGAAGTGCCGCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTDQRRN*KCRTSR
Trigger: CCTGCTGGTGCGGCACTTCCAGTTCCTGCGCTGGTC...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGAGGCCCTGCCCACAGTaGAAGGGGGAGCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRRPCPQ*KGEQDS
Trigger: GCTATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCT...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGCCAAAAGCCAGGATaGTGCCAAGGGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSCQKPG*CQGAWP
Trigger: AGGCCAAGCCCCTTGGCACCATCCTGGCTTTTGGCA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAAGGGGGCAGGCTGAGTaGGAACCTTGGCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTRGQAE*EPWPGM
Trigger: CATCCCAGGCCAAGGTTCCCACTCAGCCTGCCCCCT...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCAGGGGCTGGGCCAGATaGAATCCTAAATGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPRGWAR*NPKCQV
Trigger: GACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGTCAGTGTGCCCCACTaGCTATTCAGAATTGAGACC +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPVSVPH*LFRIET
Trigger: GGTCTCAATTCTGAATAGCCAGTGGGGCACACTGAC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGACGTTCTGGCCCGCGTTaGCCTCCACGTCGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRRSGPR*PPRRPG
Trigger: GCCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACG...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCCGGCCAGTACCGTaGGCATTTCACCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYILRPVP*AFHPAH
Trigger: GTGGGCAGGGTGAAATGCTCACGGTACTGGCCGGAG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTAGGGCCCCGCTATCTTaGCTCCAGCCCCTCCAAGTA +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFRAPLS*LQPLQV
Trigger: TACTTGGAGGGGCTGGAGTCAAGATAGCGGGGCCCT...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCTGGCTATTCAGAATTaGGACCTGCTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPLAIQN*DLLPQD
Trigger: GTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGCAGGCCAGTGAGGCCTaGAGATTAAAGGAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWQASEA*RLKEEG
Trigger: CCCCTCTTCCTTTAATCTTCAGGCCTCACTGGCCTG...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGTCACTGGCCCAAGCTaGGCAGGACAGGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTVTGPS*AGQASE
Trigger: CTCACTGGCCTGTCCTGCTCAGCTTGGGCCAGTGAC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGTACTCGCAGGGCACTaGTGGGTCACTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTVLAGH*WVTCLL
Trigger: GAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTAC...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTGTACTCGCAGGGCACTaGTGGGTCACTTGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFVLAGH*WVTCLL
Trigger: GAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTAC...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACTCTGCCCGCGGCCATaGACTGGAACGACGCGTTCT +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKLCPRP*TGTTRS
Trigger: AGAACGCGTCGTTCCAGTGCATGGCCGCGGGCAGAG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTCTGGTTGTGGCTGCTaGCCAGGGTGTAGTGATAGC +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSSGCGC*PGCSDS
Trigger: GCTATCACTACACCCTGGGCAGCAGCCACAACCAGA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGGTCTGGTTGTGGCTaGTGCCCAGGGTGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSWSGCG*CPGCSD
Trigger: ATCACTACACCCTGGGCAGCAGCCACAACCAGACCA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCCATGGTAGGTCTCATTaGGGAGCTTGGAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPHGRSH*GAWRWY
Trigger: GTACCATCTCCAAGCTCCGCAATGAGACCTACCATG...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGCCGCTTGCTTTCCTTaGAGGCAGCTTTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSAACFP*RQLSWQ
Trigger: TTGCCAGGAAAGCTGCCTGCAAGGAAAGCAAGCGGC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCACACGCACCGCAGGGTaGAGCTGCCCCGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTTRTAG*SCPVWY
Trigger: ATACCACACGGGGCAGCTGCACCCTGCGGTGCGTGT...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCACACGCACCGCAGGGTaGAGCTGCCCCGTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYITRTAG*SCPVWY
Trigger: ATACCACACGGGGCAGCTGCACCCTGCGGTGCGTGT...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGCAGGCATTGGCTCCTaGCGGCTGCCCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKAGIGS*RLPLTL
Trigger: CAAGGTCAAGGGCAGCCGGCAGGAGCCAATGCCTGC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGCAGGCATTGGCTCCTaGCGGCTGCCCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIAGIGS*RLPLTL
Trigger: CAAGGTCAAGGGCAGCCGGCAGGAGCCAATGCCTGC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTCTCCCAGCATCGGGTaGAGTTTCACTCGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRSPSIG*SFTRCR
Trigger: TCGGCACCGAGTGAAACTGCACCCGATGCTGGGAGA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGACGATGCTGGAACAGTaGTCCTGCCACACCATACGC +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWTMLEQ*SCHTIR
Trigger: GCGTATGGTGTGGCAGGAGCACTGTTCCAGCATCGT...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGTGAGCATTTCACCCTaGCCACCTCGACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQVSISP*PPRPAW
Trigger: CCAAGCTGGTCGAGGTGGGCAGGGTGAAATGCTCAC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000460170.2
CDS-3UTR GCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGACGCCCTCACACTCTaGCATGTCCAGCATCACATC +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWDALTL*HVQHHI
Trigger: GATGTGATGCTGGACATGGCAGAGTGTGAGGGCGTC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGGGGCAACAGGGCGATaGTGCACTCCTCCACGTCCA +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIGATGR*CTPPRP
Trigger: TGGACGTGGAGGAGTGCAGCATCGCCCTGTTGCCCC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGTGCTCTGCAGCGGGTaGAGGGTCACGATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTVLCSG*RVTMKA
Trigger: GGCCTTCATCGTGACCCTGCACCCGCTGCAGAGCAC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGTGCTCTGCAGCGGGTaGAGGGTCACGATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIVLCSG*RVTMKA
Trigger: GGCCTTCATCGTGACCCTGCACCCGCTGCAGAGCAC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTATGAGGCCATATTGCTaGCGGCCTGGCTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFMRPYC*RPGSGQ
Trigger: CTGGCCAGAGCCAGGCCGGCAGCAATATGGCCTCAT...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACCCCCGTTTAGGCAGTaGACGATGGTGCGCCCATCC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKPPFRQ*TMVRPS
Trigger: GGATGGGCGCACCATCGTGCACTGCCTAAACGGGGG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCCCCCCGTTTAGGCAGTaGACGATGGTGCGCCCATCC +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPPPFRQ*TMVRPS
Trigger: GGATGGGCGCACCATCGTGCACTGCCTAAACGGGGG...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCAGCATCCACTCCAGTaGTTGCCCCATGGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQQHPLQ*LPHGSV
Trigger: CACACTCCCATGGGGCAAGCACTGGAGTGGATGCTG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTGAGGTGGGGCTGGGCTaGAGACTTGCTAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFEVGLG*RLAKLL
Trigger: GAGGAGCTTAGCAAGTCTGCAGCCCAGCCCCACCTC...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCAAAAGCCAGGATGGTaGCAAGGGGCTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRQKPGW*QGAWPE
Trigger: CTCAGGCCAAGCCCCTTGGCACCATCCTGGCTTTTG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGGCCTCACTCATCCCTaGCAAAAGCCAGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQGLTHP*QKPGWC
Trigger: GCACCATCCTGGCTTTTGGCAGGGATGAGTGAGGCC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGAACCTTGGCCTGGGATaGTCTCTGCAGGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRNLGLG*SLQGLT
Trigger: AGTGAGGCCCTGCAGAGAGCATCCCAGGCCAAGGTT...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCGCACTTGCTCCCACTaGAAGTCATCGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQRTCSH*KSSYWA
Trigger: GGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAATGGGCTCGCTGGCCTaGGGCATGCTGGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTMGSLA*GMLGSV
Trigger: AACACTTCCCAGCATGCCCCAGGCCAGCGAGCCCAT...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACAGGCGGGAGAAGTGTaGGGCCTTTGCGCAGGGGTA +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKQAGEV*GLCAGV
Trigger: TACCCCTGCGCAAAGGCCCCACACTTCTCCCGCCTG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCTGGAACGACGCGTTCTaGCCCGCGTTGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIWNDAF*PALTST
Trigger: CGTGGAGGTCAACGCGGGCCAGAACGCGTCGTTCCA...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCTTTGGGGGCCCTCATaGGCTCTGCGCATTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFLWGPS*ALRIWC
Trigger: GCACCAAATGCGCAGAGCCCATGAGGGCCCCCAAAG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCAAAAGCCAGGCCTTTaGGGGCCCTCATGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFQKPGL*GPSWAL
Trigger: CAGAGCCCATGAGGGCCCCCAAAGGCCTGGCTTTTG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCTCCTCCACAATCACCTaGTACACACTGATGGGCGCA +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPSSTIT*YTLMGA
Trigger: TGCGCCCATCAGTGTGTACCAGGTGATTGTGGAGGA...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCCCTAGGCTCAAGTGGTaGGTTCCAGAAGCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSPRLKW*VPEASV
Trigger: TACCGAGGCTTCTGGAACCCACCACTTGAGCCTAGG...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCATCTCCTCCGATCTCTaGGACACCTCCAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIISSDL*DTSRGR
Trigger: GCGGCCCCTGGAGGTGTCCCAGAGATCGGAGGAGAT...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAATCTCCTCCGATCTCTaGGACACCTCCAGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKISSDL*DTSRGR
Trigger: GCGGCCCCTGGAGGTGTCCCAGAGATCGGAGGAGAT...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGCTGTGAAGTGGAACTaGCGGACCTCGTGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIAVKWN*RTSCRA
Trigger: TGCCCGGCACGAGGTCCGCCAGTTCCACTTCACAGC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGACCGAGTTCAGCGTCTaGAACTCTTCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQTEFSV*NSSRSW
Trigger: CCAGCTGCGGGAAGAGTTCCAGACGCTGAACTCGGT...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATCATCTCCAGGACCGTaGCGCAGGCGCAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKSSPGP*RRRRRC
Trigger: GCACCTTCTGCGCCTGCGCCACGGTCCTGGAGATGA...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAAGTTCCGGAGGGTTTTaGCAGCAAAGAAAACGTCCA +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPSSGGF*QQRKRP
Trigger: TGGACGTTTTCTTTGCTGCCAAAACCCTCCGGAACT...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCTATGGAGGTGGGGCTaGGCTGCAGACTTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQLWRWG*AADLLS
Trigger: GCTTAGCAAGTCTGCAGCCCAGCCCCACCTCCATAG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAAGGACCCTATGGAGGTaGGGCTGGGCTGCAGACTTG +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTRTLWR*GWAADL
Trigger: CAAGTCTGCAGCCCAGCCCCACCTCCATAGGGTCCT...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGCGCTGCAGTTCCCCTaGGGAGGACAGTCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPALQFP*GGQSVC
Trigger: GCACACTGACTGTCCTCCCCAGGGGAACTGCAGCGC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCTTCATTCTGCAACAGTaGGTCAGGCAGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPFILQQ*VRQGRS
Trigger: GCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAA...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGCATGCTGGGAAGTGTTaGCCATCAAGTAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWHAGKC*PSSRSR
Trigger: ACGGCTCCTACTTGATGGTCAACACTTCCCAGCATG...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCTCAGGCTCTGGAAGATaGCATGGGCTCGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPSGSGR*HGLAGL
Trigger: CAGGCCAGCGAGCCCATGTCATCTTCCAGAGCCTGA...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATCAGGCTCTGGAAGATaGCATGGGCTCGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKSGSGR*HGLAGL
Trigger: CAGGCCAGCGAGCCCATGTCATCTTCCAGAGCCTGA...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCGCCTCAAACAGCACCTaGTATTCATTGGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPASNST*YSLGQK
Trigger: TTTCTGGCCCAATGAATATCAGGTGCTGTTTGAGGC...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGCCTCAGCAGCACGGTaGTGGTGTTCTCAGACTCGC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKASAAR*WCSQTR
Trigger: GCGAGTCTGAGAACACCATCACCGTGCTGCTGAGGC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCCTGCCGGCTGCCCTTaGCCTTGTCTTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQPAGCP*PCLSSL
Trigger: CAAAGAAGAAAGACAAGGTCAAGGGCAGCCGGCAGG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACAGAGCCAGCCGTCCTaGGCCTTTGTCACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKQSQPS*AFVTLP
Trigger: TGGCAGAGTGACAAAGGCTCAGGACGGCTGGCTCTG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTCCTACCTCTTCCTCTaGACTCCAGAGGGTATGACC +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSSYLFL*TPEGMT
Trigger: GGTCATACCCTCTGGAGTTCAGAGGAAGAGGTAGGA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATTGCCTCCTCGAAGGTaGAGCCAGCTGCCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKLPPRR*SQLPES
Trigger: AGACTCCGGCAGCTGGCTGCACCTTCGAGGAGGCAA...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGACAGCGGTACAGGTCCTaGTCGGCGCGGCTCACGGCA +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRQRYRS*SARLTA
Trigger: TGCCGTGAGCCGCGCCGAGCAGGACCTGTACCGCTG...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGGTACTCAATCTCCTTaGGCACGATCGGCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKGTQSP*ARSARR
Trigger: GCGACGGGCCGATCGTGCGCAAGGAGATTGAGTACC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTCTGGTTGTGGCTGCTaGCCAGGGTGTAGTGATAGC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRSGCGC*PGCSDS
Trigger: GCTATCACTACACCCTGGGCAGCAGCCACAACCAGA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGGTCAGGGACTCGGCTaGAATCCCACTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTGQGLG*NPTGHI
Trigger: GATGTGCCCAGTGGGATTGCAGCCGAGTCCCTGACC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGGTTATCTCAGTGAGTaGCGCCTGGCCGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRGYLSE*RLAEAF
Trigger: AAAGGCTTCGGCCAGGCGGCACTCACTGAGATAACC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACATCCTGGCAATGCGGATaGAATTCAGCCGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTSWQCG*NSAGSP
Trigger: GGGAGACCCGGCTGAATTGCATCCGCATTGCCAGGA...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTTCCTGGCAATGCGGATaGAATTCAGCCGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFSWQCG*NSAGSP
Trigger: GGGAGACCCGGCTGAATTGCATCCGCATTGCCAGGA...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGCTCCAGGGCAAAAGTaGGCACGACATACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQAPGQK*ARHTQP
Trigger: TGGCTGAGTATGTCGTGCGCACTTTTGCCCTGGAGC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGCAGGCCTCCAGGATTaGATCATGAATGAAGATGTA +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPAGLQD*IMNEDV
Trigger: TACATCTTCATTCATGATGCAATCCTGGAGGCCTGC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGATCGGGCGTGGTGCTCTaGAGCGGGTGCAGGGTCACG +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRSGVVL*SGCRVT
Trigger: CGTGACCCTGCACCCGCTGCAGAGCACCACGCCCGA...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAGGCTCTGGCCAGTACTaGAGGCAGGGCCAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRGSGQY*RQGQAE
Trigger: CTCCGCCTGGCCCTGCCTGCAGTACTGGCCAGAGCC...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCTCCATGAGGCCATATTaGTGCCGGCCTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTSMRPY*CRPGSG
Trigger: GCCAGAGCCAGGCCGGCAGCAATATGGCCTCATGGA...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAAGGTGTGTCCCGGTATaGAGACCAGCGCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTRCVPV*RPAQEL
Trigger: CAGTTCCTGCGCTGGTCTGCATACCGGGACACACCT...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACACAGCATCCACTCCAGTaGTTGCCCCATGGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTQHPLQ*LPHGSV
Trigger: CACACTCCCATGGGGCAAGCACTGGAGTGGATGCTG...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTCAGCACAGGCCTaGAGGACCCTATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYILSAQA*RTLWRW
Trigger: CCACCTCCATAGGGTCCTGCAGGCCTGTGCTGAGAG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCAAAAGCCAGGATGGTaGCAAGGGGCTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFQKPGW*QGAWPE
Trigger: CTCAGGCCAAGCCCCTTGGCACCATCCTGGCTTTTG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTAACCTTGGCCTGGGATaGTCTCTGCAGGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFNLGLG*SLQGLT
Trigger: AGTGAGGCCCTGCAGAGAGCATCCCAGGCCAAGGTT...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGAGGTGACTTCATTCTaGAACAGTGGGTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWEVTSF*NSGSGR
Trigger: CCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGACAAACATCAGCTTATaGCTCCCCACAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRTNISL*LPTAPC
Trigger: GCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGT...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTTCATCGTACTGGGCCTaGCTGTACTCGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFSSYWA*LYSQGT
Trigger: AGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGA...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTGGCCTGGGGCATGCTaGGAAGTGTTGACCATCAAG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRWPGAC*EVLTIK
Trigger: CTTGATGGTCAACACTTCCCAGCATGCCCCAGGCCA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCATGACATGGGCTCGCTaGCCTGGGGCATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTMTWAR*PGACWE
Trigger: TTCCCAGCATGCCCCAGGCCAGCGAGCCCATGTCAT...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGTAGCCCCTGCGGTCTaGGGAGATGAGGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTVAPAV*GDEGLK
Trigger: TTTGAGGCCCTCATCTCCCCAGACCGCAGGGGCTAC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCGCGGCTGATGAGGGGTaGCCCAGGGCGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPAADEG*PRAASA
Trigger: GGCACTGGCCGCCCTGGGCCACCCCTCATCAGCCGC...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCACGTTGTAGCCCAGTaGTTCCCACTGCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFHVVAQ*FPLQGQ
Trigger: CTGACCCTGCAGTGGGAACCACTGGGCTACAACGTG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCACTCTCGGATGGTCTaGTTGTGGCTGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTHSRMV*LWLLPR
Trigger: CCTGGGCAGCAGCCACAACCAGACCATCCGAGAGTG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACACTCTCGGATGGTCTaGTTGTGGCTGCTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKHSRMV*LWLLPR
Trigger: CCTGGGCAGCAGCCACAACCAGACCATCCGAGAGTG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGTCACACACTCTCGGATaGTCTGGTTGTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQSHTLG*SGCGCC
Trigger: GCAGCAGCCACAACCAGACCATCCGAGAGTGTGTGA...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGGAGATGGTACGTCGTaGGCCTGGCACGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIGDGTS*AWHVHC
Trigger: GCAGTGAACGTGCCAGGCCCACGACGTACCATCTCC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGGAGATGGTACGTCGTaGGCCTGGCACGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKGDGTS*AWHVHC
Trigger: GCAGTGAACGTGCCAGGCCCACGACGTACCATCTCC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCTGCGGAGCTTGGAGATaGTACGTCGTGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTCGAWR*YVVGLA
Trigger: TGCCAGGCCCACGACGTACCATCTCCAAGCTCCGCA...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTCTCATTGCGGAGCTTaGAGATGGTACGTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRSHCGA*RWYVVG
Trigger: GCCCACGACGTACCATCTCCAAGCTCCGCAATGAGA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGTGCCTGGGTGCAGGTTaGAGAAGACATGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWCLGAG*RRHGRS
Trigger: AGACCTACCATGTCTTCTCCAACCTGCACCCAGGCA...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCAGGTAGGTGGTGCCTaGGTGCAGGTTGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFQVGGA*VQVGED
Trigger: GTCTTCTCCAACCTGCACCCAGGCACCACCTACCTG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGTCCTCCACAATCACCTaGTACACACTGATGGGCGCA +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWSSTIT*YTLMGA
Trigger: TGCGCCCATCAGTGTGTACCAGGTGATTGTGGAGGA...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCTTCCTAGGCTCAAGTaGTGGGTTCCAGAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRLPRLK*WVPEAS
Trigger: CGAGGCTTCTGGAACCCACCACTTGAGCCTAGGAAG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAATCATAGGCAGGCATTaGCTCCTGCCGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTIIGRH*LLPAAL
Trigger: AAGGGCAGCCGGCAGGAGCCAATGCCTGCCTATGAT...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGGGGACGCCATGCTCTaGCCACGCTGTGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIGDAML*PRCEVE
Trigger: TTCCACTTCACAGCGTGGCCAGAGCATGGCGTCCCC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGCAAGAAGGCCTTCTTaGAGTCAGGTGTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRARRPS*SQVCPG
Trigger: ACCGGGACACACCTGACTCCAAGAAGGCCTTCTTGC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGACGTCCACCAAGTTGTaGCAGCGGATCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRTSTKL*QRIISR
Trigger: CCTGGAGATGATCCGCTGCCACAACTTGGTGGACGT...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCAGGCCCTGCCCACAGTaGAAGGGGGAGCAAGATAGC +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPRPCPQ*KGEQDS
Trigger: GCTATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCT...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTTGCCAAAAGCCAGGATaGTGCCAAGGGGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFCQKPG*CQGAWP
Trigger: AGGCCAAGCCCCTTGGCACCATCCTGGCTTTTGGCA...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGTAATAGGCAGATCCTaGTTCAGGGAAGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPVIGRS*FREAQS
Trigger: GCTCTGAGCTTCCCTGAACCAGGATCTGCCTATTAC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGATCAGCCTGGTGCCACTaGCGGCCGTGGGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRSAWCH*RPWDPV
Trigger: GACTGGATCCCACGGCCGTCAGTGGCACCAGGCTGA...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGATCAGCCTGGTGCCACTaGCGGCCGTGGGATCCAGTC +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRSAWCH*RPWDPV
Trigger: GACTGGATCCCACGGCCGTCAGTGGCACCAGGCTGA...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGCCTCAAACAGCACCTaGTATTCATTGGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPASNST*YSLGQK
Trigger: TTTCTGGCCCAATGAATATCAGGTGCTGTTTGAGGC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGATGTAGGTCTGCAGGCTaGCGGCGTGCACCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRCRSAG*RRAPQP
Trigger: GGGCTGAGGTGCACGCCGTCAGCCTGCAGACCTACA...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTCAGGCTTCGGCCCTTaGGTGGCTATGAAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRSGFGP*VAMKWF
Trigger: AAACCACTTCATAGCCACTCAAGGGCCGAAGCCTGA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGTCCCCGTAGGTGTCTaGGTCCTCCGGCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRVPVGV*VLRPVP
Trigger: CGGTACTGGCCGGAGGACTCAGACACCTACGGGGAC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCAGTCTGGATCATGTTaGCACGCCGGGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTQSGSC*HAGSRE
Trigger: CTCTCTGCTCCCGGCGTGTCAACATGATCCAGACTG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCAGTCTGGATCATGTTaGCACGCCGGGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIQSGSC*HAGSRE
Trigger: CTCTCTGCTCCCGGCGTGTCAACATGATCCAGACTG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCAGGCCAGTGAGGCCTaGAGATTAAAGGAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFQASEA*RLKEEG
Trigger: CCCCTCTTCCTTTAATCTTCAGGCCTCACTGGCCTG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTGGGTGGATTCGCACTTaGTCCCACTGGAAGTCATCG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFGWIRT*SHWKSS
Trigger: CGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCC...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCAGGGTGCCCGGGCTGTaGCCGTCCCGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRVPGL*PSRLYR
Trigger: CCTGTACAGCCGGGACGGGCACAGCCCGGGCACCCT...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCTCCTGGCAATGCGGATaGAATTCAGCCGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTSWQCG*NSAGSP
Trigger: GGGAGACCCGGCTGAATTGCATCCGCATTGCCAGGA...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGTGAGCATTTCACCCTaGCCACCTCGACCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIVSISP*PPRPAW
Trigger: CCAAGCTGGTCGAGGTGGGCAGGGTGAAATGCTCAC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGACGATATAGCAACCTGTaGGGCCGGTGCCCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRRYSNL*GRCPRC
Trigger: GCAGCGCGGGCACCGGCCGCACAGGTTGCTATATCG...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAAGAAGTCGGGCGTGGTaGTCTGCAGCGGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRRSRAW*SAAGAG
Trigger: CCCTGCACCCGCTGCAGAGCACCACGCCCGACTTCT...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTAACCGAGAGATGTTCTaGACCCGGAAGACTCGAGCC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFNREMF*TRKTRA
Trigger: GGCTCGAGTCTTCCGGGTGCAGAACATCTCTCGGTT...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAAGGTGTGTCCCGGTATaGAGACCAGCGCAGGAACTG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKRCVPV*RPAQEL
Trigger: CAGTTCCTGCGCTGGTCTGCATACCGGGACACACCT...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGATCCACTCCAGTGCTTaGCCCATGGGAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQIHSSA*PMGVCL
Trigger: CAAACACACTCCCATGGGGCAAGCACTGGAGTGGAT...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGGCCTCACTCATCCCTaGCAAAAGCCAGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKGLTHP*QKPGWC
Trigger: GCACCATCCTGGCTTTTGGCAGGGATGAGTGAGGCC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACATCCTCTACCCACATaGAGAGGGGGCAGGCTGAGT +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKHPLPT*RGGRLS
Trigger: ACTCAGCCTGCCCCCTCTGCATGTGGGTAGAGGATG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAAGATGGAATCCTAAATaGCAAGTCCCAGTACATCCT +
Preference number: 4 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPRWNPK*QVPVHP
Trigger: AGGATGTACTGGGACTTGGCATTTAGGATTCCATCT...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCTCATCGTACTGGGCCTaGCTGTACTCGCAGGGCACT +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPSSYWA*LYSQGT
Trigger: AGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGA...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACATGGCCTGGGGCATGCTaGGAAGTGTTGACCATCAAG +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTWPGAC*EVLTIK
Trigger: CTTGATGGTCAACACTTCCCAGCATGCCCCAGGCCA...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTTTCTCGCTCAGGCTCTaGAAGATGACATGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFFSLRL*KMTWAR
Trigger: GCGAGCCCATGTCATCTTCCAGAGCCTGAGCGAGAA...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACACGTTGTAGCCCAGTaGTTCCCACTGCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKHVVAQ*FPLQGQ
Trigger: CTGACCCTGCAGTGGGAACCACTGGGCTACAACGTG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGGTACGTCGTGGGCCTaGCACGTTCACTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRGTSWA*HVHCRV
Trigger: GACCCGGCAGTGAACGTGCCAGGCCCACGACGTACC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTGCCTGGGTGCAGGTTaGAGAAGACATGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRCLGAG*RRHGRS
Trigger: AGACCTACCATGTCTTCTCCAACCTGCACCCAGGCA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCGCCTCGAAGGTCAATaGCACTGGGAAGCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTRLEGQ*HWEAVL
Trigger: CAGGACTGCTTCCCAGTGCCATTGACCTTCGAGGCG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCCTAGGCTCAAGTGGTaGGTTCCAGAAGCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFPRLKW*VPEASV
Trigger: TACCGAGGCTTCTGGAACCCACCACTTGAGCCTAGG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGTGCAGGCAGCTTTCCTaGCAATGCGGATGCAATTCA +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWCRQLS*QCGCNS
Trigger: TGAATTGCATCCGCATTGCCAGGAAAGCTGCCTGCA...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTACTGCTCCTCAGTCTaGATCATGTTGACACGCCGG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRYCSSV*IMLTRR
Trigger: CCGGCGTGTCAACATGATCCAGACTGAGGAGCAGTA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCACCGAGTTCAGCGTCTaGAACTCTTCCCGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTTEFSV*NSSRSW
Trigger: CCAGCTGCGGGAAGAGTTCCAGACGCTGAACTCGGT...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTTGGACTGGTTCAGCTaGTTGAGCATGACGATGGAG +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSLDWFS*LSMTME
Trigger: CTCCATCGTCATGCTCAACCAGCTGAACCAGTCCAA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTACGTCCACCAAGTTGTaGCAGCGGATCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFTSTKL*QRIISR
Trigger: CCTGGAGATGATCCGCTGCCACAACTTGGTGGACGT...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGAGGGGCTGGGCCAGATaGAATCCTAAATGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQRGWAR*NPKCQV
Trigger: GACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGTTCATTCTGCAACAGTaGGTCAGGCAGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQFILQQ*VRQGRS
Trigger: GCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAA...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCTTGCAGATTGTCACTaGCCCAAGCTGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQLADCH*PKLSRT
Trigger: TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACACATGCTGGGAAGTGTTaGCCATCAAGTAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTHAGKC*PSSRSR
Trigger: ACGGCTCCTACTTGATGGTCAACACTTCCCAGCATG...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGCCTCAAACAGCACCTaGTATTCATTGGGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWASNST*YSLGQK
Trigger: TTTCTGGCCCAATGAATATCAGGTGCTGTTTGAGGC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTTTGCGCAGGGGTAGCTaGGAAGCAGGATGTCATCTA +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFLRRGS*EAGCHL
Trigger: TAGATGACATCCTGCTTCTCAGCTACCCCTGCGCAA...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCGTCCAGCGGCGGGGTaGCCGAGTTCAGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRPAAG*PSSASG
Trigger: TCCAGACGCTGAACTCGGTCACCCCGCCGCTGGACG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCCAGGCCAGTGAGGCCTaGAGATTAAAGGAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPQASEA*RLKEEG
Trigger: CCCCTCTTCCTTTAATCTTCAGGCCTCACTGGCCTG...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGTCACTGGCCCAAGCTaGGCAGGACAGGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRVTGPS*AGQASE
Trigger: CTCACTGGCCTGTCCTGCTCAGCTTGGGCCAGTGAC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTTCCTACCTCTTCCTCTaGACTCCAGAGGGTATGACC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFSYLFL*TPEGMT
Trigger: GGTCATACCCTCTGGAGTTCAGAGGAAGAGGTAGGA...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACATACAGATGGGGAAATTaGGGCACGGAATGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTYRWGN*GTEWGC
Trigger: ACACCCCCATTCCGTGCCTCAATTTCCCCATCTGTA...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGGGTGGATTCGCACTTaGTCCCACTGGAAGTCATCG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKGWIRT*SHWKSS
Trigger: CGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAAGGGCCCGCGCGCCATaGGGTACTCAATCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRRARAP*GTQSPC
Trigger: GCAAGGAGATTGAGTACCGCATGGCGCGCGGGCCCT...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCATGGTAGGTCTCATTaGGGAGCTTGGAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQHGRSH*GAWRWY
Trigger: GTACCATCTCCAAGCTCCGCAATGAGACCTACCATG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGCCGCTTGCTTTCCTTaGAGGCAGCTTTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPAACFP*RQLSWQ
Trigger: TTGCCAGGAAAGCTGCCTGCAAGGAAAGCAAGCGGC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGCCGCTTGCTTTCCTTaGAGGCAGCTTTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIAACFP*RQLSWQ
Trigger: TTGCCAGGAAAGCTGCCTGCAAGGAAAGCAAGCGGC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAGCAGGCATTGGCTCCTaGCGGCTGCCCTTGACCTTG +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRAGIGS*RLPLTL
Trigger: CAAGGTCAAGGGCAGCCGGCAGGAGCCAATGCCTGC...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCCTGGAACAGTGCTCCTaGCACACCATACGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPLEQCS*HTIRQK
Trigger: CTTCTGGCGTATGGTGTGGCAGGAGCACTGTTCCAG...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACGATGCTGGAACAGTaGTCCTGCCACACCATACGC +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPTMLEQ*SCHTIR
Trigger: GCGTATGGTGTGGCAGGAGCACTGTTCCAGCATCGT...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAACGATGCTGGAACAGTaGTCCTGCCACACCATACGC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKTMLEQ*SCHTIR
Trigger: GCGTATGGTGTGGCAGGAGCACTGTTCCAGCATCGT...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCTACTCTGAGGATCAATaGGGATCATCTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPYSEDQ*GSSPCR
Trigger: CCTACAAGGAGATGATCCGCATTGATCCTCAGAGTA...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATAGATGGAATCCTAAATaGCAAGTCCCAGTACATCCT +
Preference number: 4 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDRWNPK*QVPVHP
Trigger: AGGATGTACTGGGACTTGGCATTTAGGATTCCATCT...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTTCAGAATTGAGACCTaGTTCCCCAGGACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRFRIET*FPRTFR
Trigger: CCTGAAGGTCCTGGGGAAGCAGGTCTCAATTCTGAA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGCTGTTGTTCAGCCTTaGAGATTGTCACTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRAVVQP*RLSLAQ
Trigger: TTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGAATGGGGGTGTGGCCTaGCCCATTTTAAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRNGGVA*PILKRP
Trigger: AGGTCTCTTTAAAATGGGGCAGGCCACACCCCCATT...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCACAAACATCAGCTTATaGCTCCCCACAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTTNISL*LPTAPC
Trigger: GCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGT...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCTGGAAGTCATCGTACTaGGCCTGGCTGTACTCGCAG +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPWKSSY*AWLYSQ
Trigger: CTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCA...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCTGGCCTGGGGCATGCTaGGAAGTGTTGACCATCAAG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTWPGAC*EVLTIK
Trigger: CTTGATGGTCAACACTTCCCAGCATGCCCCAGGCCA...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACGCCAGGAAGCGCCGGTaGCTGATGTGCCGCACGCCC +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHARKRR*LMCRTP
Trigger: GGGCGTGCGGCACATCAGCCACCGGCGCTTCCTGGC...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCTCACACACTCTCGGATaGTCTGGTTGTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPSHTLG*SGCGCC
Trigger: GCAGCAGCCACAACCAGACCATCCGAGAGTGTGTGA...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGAAGGTCAATGGCACTaGGAAGCAGTCCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIEGQWH*EAVLST
Trigger: GGTGGACAGGACTGCTTCCCAGTGCCATTGACCTTC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGAAGGTCAATGGCACTaGGAAGCAGTCCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTEGQWH*EAVLST
Trigger: GGTGGACAGGACTGCTTCCCAGTGCCATTGACCTTC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGTTGGACTGGTTCAGCTaGTTGAGCATGACGATGGAG +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRLDWFS*LSMTME
Trigger: CTCCATCGTCATGCTCAACCAGCTGAACCAGTCCAA...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGCAAGAAGGCCTTCTTaGAGTCAGGTGTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPARRPS*SQVCPG
Trigger: ACCGGGACACACCTGACTCCAAGAAGGCCTTCTTGC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGAGTGGTACTGATCCATaGTCTCCACCATGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWSGTDP*SPPCWV
Trigger: AACCCAACATGGTGGAGACCATGGATCAGTACCACT...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACGCCCTGAGTGTGCAGTaGGTGCCCCAGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHALSVQ*VPQARA
Trigger: GGCCCTGGCCTGGGGCACCCACTGCACACTCAGGGC...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAGTGGGAACCTTGGCCTaGGATGCTCTCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRVGTLA*DALCRA
Trigger: GGCCCTGCAGAGAGCATCCCAGGCCAAGGTTCCCAC...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGTGGGAACCTTGGCCTaGGATGCTCTCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRVGTLA*DALCRA
Trigger: GGCCCTGCAGAGAGCATCCCAGGCCAAGGTTCCCAC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCATGCTGGGAAGTGTTaGCCATCAAGTAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTHAGKC*PSSRSR
Trigger: ACGGCTCCTACTTGATGGTCAACACTTCCCAGCATG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGCCTCAGCAGCACGGTaGTGGTGTTCTCAGACTCGC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRASAAR*WCSQTR
Trigger: GCGAGTCTGAGAACACCATCACCGTGCTGCTGAGGC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCTCAGGCTTCGGCCCTTaGGTGGCTATGAAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTSGFGP*VAMKWF
Trigger: AAACCACTTCATAGCCACTCAAGGGCCGAAGCCTGA...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGTGGGAGGAATTACTCTaGGGATCAATGCGGATCATC +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQWEELL*GSMRII
Trigger: GATGATCCGCATTGATCCTCAGAGTAATTCCTCCCA...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGACAGAGCAGGAGGCACTaGTCTTCCTCGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRQSRRH*SSSPVQ
Trigger: CTGGACTGGCGAGGAAGATCAGTGCCTCCTGCTCTG...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGACAGAGCAGGAGGCACTaGTCTTCCTCGCCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRQSRRH*SSSPVQ
Trigger: CTGGACTGGCGAGGAAGATCAGTGCCTCCTGCTCTG...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACTGGCTATTCAGAATTaGGACCTGCTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKLAIQN*DLLPQD
Trigger: GTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCTACAGATGGGGAAATTaGGGCACGGAATGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTYRWGN*GTEWGC
Trigger: ACACCCCCATTCCGTGCCTCAATTTCCCCATCTGTA...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGGCCCTCATGGGCTCTaGGCATTTGGTGCGGCTGAT +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRGPHGL*AFGAAD
Trigger: ATCAGCCGCACCAAATGCGCAGAGCCCATGAGGGCC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGCAGGCCTCCAGGATTaGATCATGAATGAAGATGTA +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSAGLQD*IMNEDV
Trigger: TACATCTTCATTCATGATGCAATCCTGGAGGCCTGC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTACTCTGAGGATCAATaGGGATCATCTCCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSYSEDQ*GSSPCR
Trigger: CCTACAAGGAGATGATCCGCATTGATCCTCAGAGTA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAGCAGGACGTCCATGCTaGGGTTCTTGTCGCGGTTCC +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRAGRPC*GSCRGS
Trigger: GGAACCGCGACAAGAACCGCAGCATGGACGTCCTGC...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAATGAGGCCATATTGCTaGCGGCCTGGCTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRMRPYC*RPGSGQ
Trigger: CTGGCCAGAGCCAGGCCGGCAGCAATATGGCCTCAT...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCGCAGGAACTGGAAGTaGCGCACCAGCAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRRNWK*RTSRCP
Trigger: GGGGCACCTGCTGGTGCGGCACTTCCAGTTCCTGCG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCGCAGAAGGTGCCGCTaGGTCCTCCCCCGTTTAGGC +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRRRCR*VLPRLG
Trigger: GCCTAAACGGGGGAGGACGCAGCGGCACCTTCTGCG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGAGGTGGGGCTGGGCTaGAGACTTGCTAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCREVGLG*RLAKLL
Trigger: GAGGAGCTTAGCAAGTCTGCAGCCCAGCCCCACCTC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAGCCTGGGATGCTCTCTaGAGGGCCTCACTCATCCCT +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRAWDAL*RASLIP
Trigger: AGGGATGAGTGAGGCCCTGCAGAGAGCATCCCAGGC...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGAGGTGACTTCATTCTaGAACAGTGGGTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTEVTSF*NSGSGR
Trigger: CCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGAGGTGACTTCATTCTaGAACAGTGGGTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKEVTSF*NSGSGR
Trigger: CCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGACTCGCAGGGCACTGCTaGGTCACTTGCCTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRLAGHC*VTCLLE
Trigger: TTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAG...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAATGGGCTCGCTGGCCTaGGGCATGCTGGGAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRMGSLA*GMLGSV
Trigger: AACACTTCCCAGCATGCCCCAGGCCAGCGAGCCCAT...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGATCATGTCCTCCAGTaGAGTGAAGGTCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKDHVLQ*SEGQGL
Trigger: GAGTCCCTGACCTTCACTCCACTGGAGGACATGATC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCTGCCTGGGTGCAGGTTaGAGAAGACATGGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTCLGAG*RRHGRS
Trigger: AGACCTACCATGTCTTCTCCAACCTGCACCCAGGCA...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCTCCTCCACAATCACCTaGTACACACTGATGGGCGCA +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYISSTIT*YTLMGA
Trigger: TGCGCCCATCAGTGTGTACCAGGTGATTGTGGAGGA...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTCAGGTAGACTGCTaGCCGCCAGTTCGGCCCCGA +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPPQVDC*PPVRPR
Trigger: TCGGGGCCGAACTGGCGGCCAGCAGTCTACCTGAGG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGAGTTCCGGAGGGTTTTaGCAGCAAAGAAAACGTCCA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRSSGGF*QQRKRP
Trigger: TGGACGTTTTCTTTGCTGCCAAAACCCTCCGGAACT...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGAGTTCCGGAGGGTTTTaGCAGCAAAGAAAACGTCCA +
Preference number: 4 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQSSGGF*QQRKRP
Trigger: TGGACGTTTTCTTTGCTGCCAAAACCCTCCGGAACT...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCCACCACCCGCCCATaGGACAAGCGAAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPPTTRP*DKRKAL
Trigger: CAGGGCCTTTCGCTTGTCCCATGGGCGGGTGGTGGG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAAGGGGCTGGGCCAGATaGAATCCTAAATGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKRGWAR*NPKCQV
Trigger: GACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTTGCAGATTGTCACTaGCCCAAGCTGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYILADCH*PKLSRT
Trigger: TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAG...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGGCTATGAAGTGGTTTaGCCTGTGGTAACCATCTAT +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRGYEVV*PVVTIY
Trigger: ATAGATGGTTACCACAGGTCAAACCACTTCATAGCC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTTGGGAGGAATTACTCTaGGGATCAATGCGGATCATC +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFWEELL*GSMRII
Trigger: GATGATCCGCATTGATCCTCAGAGTAATTCCTCCCA...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGGCTATGAAGTGGTTTaGCCTGTGGTAACCTTCTCG +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPGYEVV*PVVTFS
Trigger: CGAGAAGGTTACCACAGGTCAAACCACTTCATAGCC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460170.2
CDS-3UTR GCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCGAAGCCTTTGCCTGTaGGGGCCCGCACGGAGAACA +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRSLCL*GPARRT
Trigger: TGTTCTCCGTGCGGGCCCGCACAGGCAAAGGCTTCG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACTGGCCTCAGGTAGACTaGTGGCCGCCAGTTCGGCCC +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHWPQVD*WPPVRP
Trigger: GGGCCGAACTGGCGGCCAGCAGTCTACCTGAGGCCA...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTCTTCAGGTGGCTTGCTaGCTGGAAGTAGATGAGATA +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFLQVAC*LEVDEI
Trigger: TATCTCATCTACTTCCAGGCAGCAAGCCACCTGAAG...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCGCAACAGGGCGATGCTaGACTCCTCCACGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPATGRC*TPPRPA
Trigger: CGCTGGACGTGGAGGAGTGCAGCATCGCCCTGTTGC...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGGCTGTCAGTCAGGGCTaGATTAATGTAGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRAVSQG*INVVVG
Trigger: TCCAACAACTACATTAATGCAGCCCTGACTGACAGC...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAGCTGTTGTTCAGCCTTaGAGATTGTCACTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKAVVQP*RLSLAQ
Trigger: TTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGC...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCTGCAGGCAGCTTTCCTaGCAATGCGGATGCAATTCA +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPCRQLS*QCGCNS
Trigger: TGAATTGCATCCGCATTGCCAGGAAAGCTGCCTGCA...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCTTGGACTGGTTCAGCTaGTTGAGCATGACGATGGAG +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPLDWFS*LSMTME
Trigger: CTCCATCGTCATGCTCAACCAGCTGAACCAGTCCAA...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAATATTGCTGCCGGCCTaGCTCTGGCCAGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRILLPA*LWPVLQ
Trigger: CTGCAGTACTGGCCAGAGCCAGGCCGGCAGCAATAT...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAATATTGCTGCCGGCCTaGCTCTGGCCAGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRILLPA*LWPVLQ
Trigger: CTGCAGTACTGGCCAGAGCCAGGCCGGCAGCAATAT...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGTCAGTGTGCCCCACTaGCTATTCAGAATTGAGACC +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTVSVPH*LFRIET
Trigger: GGTCTCAATTCTGAATAGCCAGTGGGGCACACTGAC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCTGTACAGGAAGTAGCTaGACTGCACACAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTCTGSS*TAHSGY
Trigger: ATACCCACTGTGTGCAGTTCAGCTACTTCCTGTACA...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGACATCCGTCTGGAAAGTaGCCTCCTTGCCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRHPSGK*PPCPLC
Trigger: GCAAAGAGGGCAAGGAGGTCACTTTCCAGACGGATG...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGGGTGGATTCGCACTTaGTCCCACTGGAAGTCATCG +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRGWIRT*SHWKSS
Trigger: CGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCGCTGGCCTGGGGCATaGTGGGAAGTGTTGACCATC +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRWPGA*WEVLTI
Trigger: GATGGTCAACACTTCCCAGCATGCCCCAGGCCAGCG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGATGGTCTGGTTGTGGCTaGTGCCCAGGGTGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRWSGCG*CPGCSD
Trigger: ATCACTACACCCTGGGCAGCAGCCACAACCAGACCA...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACTTCAGGTGGCTTGCTaGCTGGAAGTAGATGAGATA +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKLQVAC*LEVDEI
Trigger: TATCTCATCTACTTCCAGGCAGCAAGCCACCTGAAG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGCTCCAGGGCAAAAGTaGGCACGACATACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRAPGQK*ARHTQP
Trigger: TGGCTGAGTATGTCGTGCGCACTTTTGCCCTGGAGC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACTCCCCACTCTCGGCCTaGCACTTGTCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHSPLSA*HLSTSA
Trigger: GGCTGAGGTGGACAAGTGGCAGGCCGAGAGTGGGGA...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGATGGAAGTCATCGTACTaGGCCTGGCTGTACTCGCAG +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRWKSSY*AWLYSQ
Trigger: CTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCA...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTTGTCTTTCTTCTTTGTaGCGTCCCAGCCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFCLSSL*RPSLQR
Trigger: TCTTTGAAGGCTGGGACGCCACAAAGAAGAAAGACA...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACGACCAGCGCAGGAACTaGAAGTGCCGCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHDQRRN*KCRTSR
Trigger: CCTGCTGGTGCGGCACTTCCAGTTCCTGCGCTGGTC...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAAAGTGGTACTGATCCATaGTCTCCACCATGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: IETCFPRTFRGWARWNPKSGTDP*SPPCWV
Trigger: AACCCAACATGGTGGAGACCATGGATCAGTACCACT...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGCCCTGAGTGTGCAGTaGGTGCCCCAGGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPALSVQ*VPQARA
Trigger: GGCCCTGGCCTGGGGCACCCACTGCACACTCAGGGC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGGGGGCAGGCTGAGTaGGAACCTTGGCCTGGGATG +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHRGQAE*EPWPGM
Trigger: CATCCCAGGCCAAGGTTCCCACTCAGCCTGCCCCCT...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCGGGGCTCCTCCCACTTaGGGAAGATCATGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPGAPPT*GRSCPP
Trigger: TGGAGGACATGATCTTCCTCAAGTGGGAGGAGCCCC...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGGCTATGAAGTGGTTTaGCCTGTGGTAACCATCTAT +
Preference number: 4 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIGYEVV*PVVTIY
Trigger: ATAGATGGTTACCACAGGTCAAACCACTTCATAGCC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGATCAGGCTTCGGCCCTTaGGTGGCTATGAAGTGGTTT +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRSGFGP*VAMKWF
Trigger: AAACCACTTCATAGCCACTCAAGGGCCGAAGCCTGA...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR TCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGGGCCCCGCTATCTTaGCTCCAGCCCCTCCAAGTA +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHRAPLS*LQPLQV
Trigger: TACTTGGAGGGGCTGGAGTCAAGATAGCGGGGCCCT...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAAGCAGGACAGGCCAGTaGGGCCTGAAGATTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRSRTGQ*GLKIKG
Trigger: TCCTTTAATCTTCAGGCCTCACTGGCCTGTCCTGCT...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGCAGGCCTCCAGGATTaGATCATGAATGAAGATGTA +
Preference number: 4 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPAGLQD*IMNEDV
Trigger: TACATCTTCATTCATGATGCAATCCTGGAGGCCTGC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCAGCATCCACTCCAGTaGTTGCCCCATGGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPQHPLQ*LPHGSV
Trigger: CACACTCCCATGGGGCAAGCACTGGAGTGGATGCTG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACCTCTCAGCACAGGCCTaGAGGACCCTATGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHLSAQA*RTLWRW
Trigger: CCACCTCCATAGGGTCCTGCAGGCCTGTGCTGAGAG...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTAGATGGAATCCTAAATaGCAAGTCCCAGTACATCCT +
Preference number: 4 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFRWNPK*QVPVHP
Trigger: AGGATGTACTGGGACTTGGCATTTAGGATTCCATCT...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACATGACATGGGCTCGCTaGCCTGGGGCATGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHMTWAR*PGACWE
Trigger: TTCCCAGCATGCCCCAGGCCAGCGAGCCCATGTCAT...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAACATCCTCATCCGTCTaGAAAGTGACCTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRTSSSV*KVTSLP
Trigger: GGGCAAGGAGGTCACTTTCCAGACGGATGAGGATGT...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAACATCCTCATCCGTCTaGAAAGTGACCTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRTSSSV*KVTSLP
Trigger: GGGCAAGGAGGTCACTTTCCAGACGGATGAGGATGT...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCGGCTGCAATCCCACTaGGCACATCCTCATCCGTCT +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRLQSH*AHPHPS
Trigger: AGACGGATGAGGATGTGCCCAGTGGGATTGCAGCCG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAAGGACCTTCAGGGGCTaGGCCAGATGGAATCCTAAA +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRRTFRG*ARWNPK
Trigger: TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCT...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CCA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGACTTGCAGATTGTCACTaGCCCAAGCTGAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRLADCH*PKLSRT
Trigger: TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAG...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCGGTTATCTCAGTGAGTaGCGCCTGGCCGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPGYLSE*RLAEAF
Trigger: AAAGGCTTCGGCCAGGCGGCACTCACTGAGATAACC...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACCAGGTAGGTGGTGCCTaGGTGCAGGTTGGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHQVGGA*VQVGED
Trigger: GTCTTCTCCAACCTGCACCCAGGCACCACCTACCTG...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACATATTGCTGCCGGCCTaGCTCTGGCCAGTACTGCAG +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHILLPA*LWPVLQ
Trigger: CTGCAGTACTGGCCAGAGCCAGGCCGGCAGCAATAT...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCGCAAGAAGGCCTTCTTaGAGTCAGGTGTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPARRPS*SQVCPG
Trigger: ACCGGGACACACCTGACTCCAAGAAGGCCTTCTTGC...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACTTAGGCAGTGCACGATaGTGCGCCCATCCCCACTCT +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHLGSAR*CAHPHS
Trigger: AGAGTGGGGATGGGCGCACCATCGTGCACTGCCTAA...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCACCACCCGCCCATaGGACAAGCGAAAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPPTTRP*DKRKAL
Trigger: CAGGGCCTTTCGCTTGTCCCATGGGCGGGTGGTGGG...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGGTGCAGGGTCACGATaGAGGCCGCACTCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPGAGSR*RPHSVC
Trigger: ACACACGGAGTGCGGCCTTCATCGTGACCCTGCACC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCTGGCTATTCAGAATTaGGACCTGCTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPLAIQN*DLLPQD
Trigger: GTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTAGGGCCCGCGCGCCATaGGGTACTCAATCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPRARAP*GTQSPC
Trigger: GCAAGGAGATTGAGTACCGCATGGCGCGCGGGCCCT...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGCTGGTCTCCCCGGGTaGTGTAGCCATGGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPAGLPG*CSHGCP
Trigger: TGGACACCCATGGCTACAGCACCCGGGGAGACCAGC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACTGGAAGTCATCGTACTaGGCCTGGCTGTACTCGCAG +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHWKSSY*AWLYSQ
Trigger: CTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCA...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTTGGAACGACGCGTTCTaGCCCGCGTTGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPWNDAF*PALTST
Trigger: CGTGGAGGTCAACGCGGGCCAGAACGCGTCGTTCCA...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGGGCGCGATGGGAGTTaGGGGCTCCTTGACGATGAG +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPGRDGS*GLLDDE
Trigger: CTCATCGTCAAGGAGCCCCCAACTCCCATCGCGCCC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACTCTCATTGCGGAGCTTaGAGATGGTACGTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHSHCGA*RWYVVG
Trigger: GCCCACGACGTACCATCTCCAAGCTCCGCAATGAGA...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GGCTGCTCTGTGGCATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACAACGTCCACCAAGTTGTaGCAGCGGATCATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GCSVAFREHVYLQSALQTTSTKL*QRIISR
Trigger: CCTGGAGATGATCCGCTGCCACAACTTGGTGGACGT...TGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATGCCACAGAGCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428026.6
CDS-3UTR CCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCAGGACCTTCAGGGGCTaGGCCAGATGGAATCCTAAA +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRTFRG*ARWNPK
Trigger: TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCT...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTTCAGGCTCTGGAAGATaGCATGGGCTCGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPSGSGR*HGLAGL
Trigger: CAGGCCAGCGAGCCCATGTCATCTTCCAGAGCCTGA...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTAGACTCGCCCAGGGGTaGCGGCATGTCGGCATAATC +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPRLAQG*RHVGII
Trigger: GATTATGCCGACATGCCGTCACCCCTGGGCGAGTCT...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCAGGACAGGCCAGTaGGGCCTGAAGATTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHSRTGQ*GLKIKG
Trigger: TCCTTTAATCTTCAGGCCTCACTGGCCTGTCCTGCT...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCTCCAGGGGCCGCTTaGTTTCCTTGCAGGCAGCTT +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPPPGAA*FPCRQL
Trigger: AAGCTGCCTGCAAGGAAAGCAAGCGGCCCCTGGAGG...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGCTGTCAGTCAGGGCTaGATTAATGTAGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRAVSQG*INVVVG
Trigger: TCCAACAACTACATTAATGCAGCCCTGACTGACAGC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR GCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACATCCACTCCAGTGCTTaGCCCATGGGAGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHIHSSA*PMGVCL
Trigger: CAAACACACTCCCATGGGGCAAGCACTGGAGTGGAT...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGTAGCCCCTGCGGTCTaGGGAGATGAGGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPVAPAV*GDEGLK
Trigger: TTTGAGGCCCTCATCTCCCCAGACCGCAGGGGCTAC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACACATCCTCATCCGTCTaGAAAGTGACCTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHTSSSV*KVTSLP
Trigger: GGGCAAGGAGGTCACTTTCCAGACGGATGAGGATGT...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACCATGGTAGGTCTCATTaGGGAGCTTGGAGATGGTAC +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHHGRSH*GAWRWY
Trigger: GTACCATCTCCAAGCTCCGCAATGAGACCTACCATG...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp GGCTGCTCTGTGGCATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACAGCTGTTGTTCAGCCTTaGAGATTGTCACTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: GCSVAFREHVYLQSALQTAVVQP*RLSLAQ
Trigger: TTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGC...TGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATGCCACAGAGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428026.6
CDS-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCGCACTTGCTCCCACTaGAAGTCATCGTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPRTCSH*KSSYWA
Trigger: GGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCG...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCACGTTGTAGCCCAGTaGTTCCCACTGCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPHVVAQ*FPLQGQ
Trigger: CTGACCCTGCAGTGGGAACCACTGGGCTACAACGTG...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACTGCAGGCAGCTTTCCTaGCAATGCGGATGCAATTCA +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHCRQLS*QCGCNS
Trigger: TGAATTGCATCCGCATTGCCAGGAAAGCTGCCTGCA...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GGCTGCTCTGTGGCATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACAGTCAGTGTGCCCCACTaGCTATTCAGAATTGAGACC +
Preference number: 4 (lower is better)
Translates to: GCSVAFREHVYLQSALQTVSVPH*LFRIET
Trigger: GGTCTCAATTCTGAATAGCCAGTGGGGCACACTGAC...TGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATGCCACAGAGCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428026.6
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACGTAATAGGCAGATCCTaGTTCAGGGAAGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHVIGRS*FREAQS
Trigger: GCTCTGAGCTTCCCTGAACCAGGATCTGCCTATTAC...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR TCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACTGTACAGGAAGTAGCTaGACTGCACACAGTGGGTAT +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHCTGSS*TAHSGY
Trigger: ATACCCACTGTGTGCAGTTCAGCTACTTCCTGTACA...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTTCTGGTTGTGGCTGCTaGCCAGGGTGTAGTGATAGC +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPSGCGC*PGCSDS
Trigger: GCTATCACTACACCCTGGGCAGCAGCCACAACCAGA...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCAGCTTTCCTGGCAATaGGGATGCAATTCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPQLSWQ*GCNSAG
Trigger: CCCGGCTGAATTGCATCCGCATTGCCAGGAAAGCTG...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCTGGAACAGTGCTCCTaGCACACCATACGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPLEQCS*HTIRQK
Trigger: CTTCTGGCGTATGGTGTGGCAGGAGCACTGTTCCAG...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTTCACACACTCTCGGATaGTCTGGTTGTGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPSHTLG*SGCGCC
Trigger: GCAGCAGCCACAACCAGACCATCCGAGAGTGTGTGA...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCTGTCTTTCTTCTTTGTaGCGTCCCAGCCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HVYLQSALQTSAYASPQPCLSSL*RPSLQR
Trigger: TCTTTGAAGGCTGGGACGCCACAAAGAAGAAAGACA...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGGAGGACAGTCAGTGTaGCCCACTGGCTATTCAGAA +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPGGQSV*PTGYSE
Trigger: TTCTGAATAGCCAGTGGGGCACACTGACTGTCCTCC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACTGTCTTTCTTCTTTGTaGCGTCCCAGCCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHCLSSL*RPSLQR
Trigger: TCTTTGAAGGCTGGGACGCCACAAAGAAGAAAGACA...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTTACTGCTCCTCAGTCTaGATCATGTTGACACGCCGG +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPYCSSV*IMLTRR
Trigger: CCGGCGTGTCAACATGATCCAGACTGAGGAGCAGTA...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTAATGGGGGTGTGGCCTaGCCCATTTTAAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPNGGVA*PILKRP
Trigger: AGGTCTCTTTAAAATGGGGCAGGCCACACCCCCATT...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGTAATAGGCAGATCCTaGTTCAGGGAAGCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPVIGRS*FREAQS
Trigger: GCTCTGAGCTTCCCTGAACCAGGATCTGCCTATTAC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR GCA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGCTGTCAGTCAGGGCTaGATTAATGTAGTTGTTGGA +
Preference number: 4 (lower is better)
Translates to: HSESTFIYKALYKHQLMPAVSQG*INVVVG
Trigger: TCCAACAACTACATTAATGCAGCCCTGACTGACAGC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS CCA 90 bp GCGCGGCTCACGGCAGCCAGCGGGAAAGTGGCCAGGAAGCGCCGGTaGCTGATGTGCCGCACGCCCGCCGCCGGCACCAGCGCCCCGCTC +
Preference number: 5 (lower is better)
Translates to: ARLTAASGKVARKRR*LMCRTPAAGTSAPL
Trigger: GAGCGGGGCGCTGGTGCCGGCGGCGGGCGTGCGGCACATCAGCCACCGGCGCTTCCTGGCCACTTTCCCGCTGGCTGCCGTGAGCCGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp GTCTCCGGCGCGCAGAGCTGGAAGGTGAGTGCCAGCACGAGCGCCTaGGCACGGGCCATGGTTGGAGCGTCGCCGCCCGTCCCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: VSGAQSWKVSASTSA*ARAMVGASPPVPGP
Trigger: GGGCCCCGGGACGGGCGGCGACGCTCCAACCATGGCCCGTGCCCAGGCGCTCGTGCTGGCACTCACCTTCCAGCTCTGCGCGCCGGAGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
CDS GCA 90 bp ACGCCCGCGCCGCGCGGGGCCTGGGACACACAGCGGTACAGGTCCTaGTCGGCGCGGCTCACGGCAGCCAGCGGGAAAGTGGCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TPAPRGAWDTQRYRS*SARLTAASGKVARK
Trigger: CTTCCTGGCCACTTTCCCGCTGGCTGCCGTGAGCCGCGCCGAGCAGGACCTGTACCGCTGTGTGTCCCAGGCCCCGCGCGGCGCGGGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp GGGGGCCCTCATGGGCTCTGCGCATTTGGTGCGGCTGATGAGGGGTaGCCCAGGGCGGCCAGTGCCGCCGTCTCCGGGACGCGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: GGPHGLCAFGAADEG*PRAASAAVSGTREQ
Trigger: CTGCTCACGCGTCCCGGAGACGGCGGCACTGGCCGCCCTGGGCCACCCCTCATCAGCCGCACCAAATGCGCAGAGCCCATGAGGGCCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000527027.1
CDS CCA 90 bp GCCTCGGCCGCTCTGCCCGCGGCCATGCACTGGAACGACGCGTTCTaGCCCGCGTTGACCTCCACGTCGCCCAGGCGGGAGAAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: ASAALPAAMHWNDAF*PALTSTSPRREKCG
Trigger: CCCACACTTCTCCCGCCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACGCGTCGTTCCAGTGCATGGCCGCGGGCAGAGCGGCCGAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp ACGATGAGCTCCGCGAAGTTAGAGACGCCCGCGCCGCGCGGGGCCTaGGACACACAGCGGTACAGGTCCTGCTCGGCGCGGCTCACGGCA +
Preference number: 5 (lower is better)
Translates to: TMSSAKLETPAPRGA*DTQRYRSCSARLTA
Trigger: TGCCGTGAGCCGCGCCGAGCAGGACCTGTACCGCTGTGTGTCCCAGGCCCCGCGCGGCGCGGGCGTCTCTAACTTCGCGGAGCTCATCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 90 bp AGCCAGCTGCCGGAGTCTCGGTCTCCGGCGCGCAGAGCTGGAAGGTaGGTGCCAGCACGAGCGCCTGGGCACGGGCCATGGTTGGAGCGT +
Preference number: 5 (lower is better)
Translates to: SQLPESRSPARRAGR*VPARAPGHGPWLER
Trigger: ACGCTCCAACCATGGCCCGTGCCCAGGCGCTCGTGCTGGCACTCACCTTCCAGCTCTGCGCGCCGGAGACCGAGACTCCGGCAGCTGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
CDS TCA 90 bp CTCTGCCCGCGGCCATGCACTGGAACGACGCGTTCTGGCCCGCGTTaGCCTCCACGTCGCCCAGGCGGGAGAAGTGTGGGGCCTTTGCGC +
Preference number: 5 (lower is better)
Translates to: LCPRPCTGTTRSGPR*PPRRPGGRSVGPLR
Trigger: GCGCAAAGGCCCCACACTTCTCCCGCCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACGCGTCGTTCCAGTGCATGGCCGCGGGCAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp GCCGGTGCCCGCGCTGCAGTGGATGACAATGGGCCCGGCATCAGGTaGGGTGGAGGCCTTCACGCGCCGGATGAAAGCCAGCAGCCCCGT +
Preference number: 5 (lower is better)
Translates to: AGARAAVDDNGPGIR*GGGLHAPDESQQPR
Trigger: ACGGGGCTGCTGGCTTTCATCCGGCGCGTGAAGGCCTCCACCCCACCTGATGCCGGGCCCATTGTCATCCACTGCAGCGCGGGCACCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 90 bp ACTCTGTGTCGGGGTCGAGGTGCCACAGCTTGTAGGTCTGCAGGCTaGCGGCGTGCACCTCAGCCCAGGGCCCGCGCGCCATGCGGTACT +
Preference number: 5 (lower is better)
Translates to: TLCRGRGATACRSAG*RRAPQPRARAPCGT
Trigger: AGTACCGCATGGCGCGCGGGCCCTGGGCTGAGGTGCACGCCGTCAGCCTGCAGACCTACAAGCTGTGGCACCTCGACCCCGACACAGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000527027.1
CDS GCA 90 bp TGTGGCAGCGGATCATCTCCAGGACCGTGGCGCAGGCGCAGAAGGTaGCGCTGCGTCCTCCCCCGTTTAGGCAGTGCACGATGGTGCGCC +
Preference number: 5 (lower is better)
Translates to: CGSGSSPGPWRRRRR*RCVLPRLGSARWCA
Trigger: GGCGCACCATCGTGCACTGCCTAAACGGGGGAGGACGCAGCGGCACCTTCTGCGCCTGCGCCACGGTCCTGGAGATGATCCGCTGCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS CCA 90 bp GAAGTAGTGCACCAGGCCTCGGGCCAGCGCCGCCTCGAAGGTCAATaGCACTGGGAAGCAGTCCTGTCCACCTGGCTCCCGCCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: EVVHQASGQRRLEGQ*HWEAVLSTWLPPQP
Trigger: AGGCTGCGGCGGGAGCCAGGTGGACAGGACTGCTTCCCAGTGCCATTGACCTTCGAGGCGGCGCTGGCCCGAGGCCTGGTGCACTACTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGGGCACGGGCCATGGTaGGAGCGTCGCCGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSGHGPW*ERRRPS
Trigger: GGACGGGCGGCGACGCTCCAACCATGGCCCGTGCCC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGCCTGGCCGAAGCCTTaGCCTGTGCGGGCCCGCACG +
Preference number: 5 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPAWPKP*PVRART
Trigger: CGTGCGGGCCCGCACAGGCAAAGGCTTCGGCCAGGC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCGCCTGGCCGAAGCCTTaGCCTGTGCGGGCCCGCACG +
Preference number: 5 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSAWPKP*PVRART
Trigger: CGTGCGGGCCCGCACAGGCAAAGGCTTCGGCCAGGC...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGCCTGGCCGAAGCCTTaGCCTGTGCGGGCCCGCACG +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWAWPKP*PVRART
Trigger: CGTGCGGGCCCGCACAGGCAAAGGCTTCGGCCAGGC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 90 bp ATCGTACTGGGCCTGGCTGTACTCGCAGGGCACTGCTGGGTCACTTaGCTCCTCGAAGGTGCAGCCAGCTGCCGGAGTCTCGGTCTCCGG +
Preference number: 5 (lower is better)
Translates to: IVLGLAVLAGHCWVT*LLEGAASCRSLGLR
Trigger: CCGGAGACCGAGACTCCGGCAGCTGGCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 90 bp TGGGGCAGGTCCGCAGGTGCCCGGGTGCCAGGGTGGATTCGCACTTaGTCCCACTGGAAGTCATCGTACTGGGCCTGGCTGTACTCGCAG +
Preference number: 5 (lower is better)
Translates to: WGRSAGARVPGWIRT*SHWKSSYWAWLYSQ
Trigger: CTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGCACCTGCGGACCTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGCGTTCTGGCCCGCGTaGACCTCCACGTCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWAFWPA*TSTSPR
Trigger: CCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACGC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCATGGGTGATGAGACCATaGGGCTCCTGGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPWVMRP*GSWGSS
Trigger: GGAGGAGCCCCAGGAGCCCAATGGTCTCATCACCCA...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACAGGGCCAGGCGGAGTaGGACTGGTTCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPQGQAE*DWFSWL
Trigger: CAACCAGCTGAACCAGTCCAACTCCGCCTGGCCCTG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCACAGGGCCCCGCTATCTaGACTCCAGCCCCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPQGPAI*TPAPPS
Trigger: ACTTGGAGGGGCTGGAGTCAAGATAGCGGGGCCCTG...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 90 bp GCCAGAAGTCGGGCGTGGTGCTCTGCAGCGGGTGCAGGGTCACGATaGAGGCCGCACTCCGTGTGTAGCTCTGCAGGGAAACCGGAACTC +
Preference number: 5 (lower is better)
Translates to: ARSRAWCSAAGAGSR*RPHSVCSSAGKPEL
Trigger: GAGTTCCGGTTTCCCTGCAGAGCTACACACGGAGTGCGGCCTTCATCGTGACCCTGCACCCGCTGCAGAGCACCACGCCCGACTTCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465525.6
CDS CCA 90 bp TCCGCAGGTGCCCGGGTGCCAGGGTGGATTCGCACTTGCTCCCACTaGAAGTCATCGTACTGGGCCTGGCTGTACTCGCAGGGCACTGCT +
Preference number: 5 (lower is better)
Translates to: SAGARVPGWIRTCSH*KSSYWAWLYSQGTA
Trigger: AGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGCACCTGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp CCCACAGGACCAGGCTGCCTCCAGTGGGCCATTTCTGATGTTGGTTaGCACACTGAGGCCTGGGTTGACAGGGTGGGCCCAGGCCTCTGG +
Preference number: 5 (lower is better)
Translates to: PTGPGCLQWAISDVG*HTEAWVDRVGPGLW
Trigger: CCAGAGGCCTGGGCCCACCCTGTCAACCCAGGCCTCAGTGTGCCAACCAACATCAGAAATGGCCCACTGGAGGCAGCCTGGTCCTGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465525.6
CDS-3UTR CAA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGCACTGCTGGGTCACTaGCCTCCTCGAAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDALLGH*PPRRCS
Trigger: GCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTGC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGCGCCCCGCTCTGCCGTaGCAAGAGGAAGCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWRPALP*QEEAFG
Trigger: GCCGAACGCTTCCTCTTGCAACGGCAGAGCGGGGCG...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATTGGGTGATGAGACCATaGGGCTCCTGGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDWVMRP*GSWGSS
Trigger: GGAGGAGCCCCAGGAGCCCAATGGTCTCATCACCCA...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGGCTGGGCTGCAGACTaGCTAAGCTCCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDGWAAD*LSSSLA
Trigger: GGCCAAGGAGGAGCTTAGCAAGTCTGCAGCCCAGCC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 90 bp TCTCAGGCTTCGGCCCTGGGGATGCAGGCAGAGGGTGCCTGTCCCTaGGACAAGGTCTCCACCCCAGGTCAGCACATCCAGCACCATCCA +
Preference number: 5 (lower is better)
Translates to: SQASALGMQAEGACP*DKVSTPGQHIQHHP
Trigger: TGGATGGTGCTGGATGTGCTGACCTGGGGTGGAGACCTTGTCTCAGGGACAGGCACCCTCTGCCTGCATCCCCAGGGCCGAAGCCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526080.1
CDS GCA 90 bp CCACTGGAAGTCATCGTACTGGGCCTGGCTGTACTCGCAGGGCACTaGTGGGTCACTTGCCTCCTCGAAGGTGCAGCCAGCTGCCGGAGT +
Preference number: 5 (lower is better)
Translates to: PLEVIVLGLAVLAGH*WVTCLLEGAASCRS
Trigger: ACTCCGGCAGCTGGCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp CTGGAAGTCATCGTACTGGGCCTGGCTGTACTCGCAGGGCACTGCTaGGTCACTTGCCTCCTCGAAGGTGCAGCCAGCTGCCGGAGTCTC +
Preference number: 5 (lower is better)
Translates to: LEVIVLGLAVLAGHC*VTCLLEGAASCRSL
Trigger: GAGACTCCGGCAGCTGGCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTGCGTTCTGGCCCGCGTaGACCTCCACGTCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFAFWPA*TSTSPR
Trigger: CCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACGC...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCACCTCCTTGCCCTCTTaGCGCCCCTCAGGGTTAGTG +
Preference number: 5 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPTSLPS*RPSGLV
Trigger: CACTAACCCTGAGGGGCGCAAAGAGGGCAAGGAGGT...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCATGGAAAGTGACCTCCTaGCCCTCTTTGCGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPWKVTS*PSLRPS
Trigger: TGAGGGGCGCAAAGAGGGCAAGGAGGTCACTTTCCA...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCACCTCCAGGGGCCGCTaGCTTTCCTTGCAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPTSRGR*LSLQAA
Trigger: AGCTGCCTGCAAGGAAAGCAAGCGGCCCCTGGAGGT...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 90 bp CCGTTTAGGCAGTGCACGATGGTGCGCCCATCCCCACTCTCGGCCTaGCACTTGTCCACCTCAGCCAGCAGGTGCAAGAAGGCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PFRQCTMVRPSPLSA*HLSTSASRCKKAFL
Trigger: CAAGAAGGCCTTCTTGCACCTGCTGGCTGAGGTGGACAAGTGGCAGGCCGAGAGTGGGGATGGGCGCACCATCGTGCACTGCCTAAACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS CCA 90 bp GTGCCAGGGTGGATTCGCACTTGCTCCCACTGGAAGTCATCGTACTaGGCCTGGCTGTACTCGCAGGGCACTGCTGGGTCACTTGCCTCC +
Preference number: 5 (lower is better)
Translates to: VPGWIRTCSHWKSSY*AWLYSQGTAGSLAS
Trigger: GGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp GGCCGAAGCCTTTGCCTGTGCGGGCCCGCACGGAGAACAGGTAGGTaGTGCCTGGGTGCAGGTTGGAGAAGACATGGTAGGTCTCATTGC +
Preference number: 5 (lower is better)
Translates to: GRSLCLCGPARRTGR*CLGAGWRRHGRSHC
Trigger: GCAATGAGACCTACCATGTCTTCTCCAACCTGCACCCAGGCACCACCTACCTGTTCTCCGTGCGGGCCCGCACAGGCAAAGGCTTCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGCGTTCTGGCCCGCGTaGACCTCCACGTCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTAFWPA*TSTSPR
Trigger: CCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACGC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGGAGTTGGGGGCTCCTaGACGATGAGCTCCGCGAAG +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWGVGGS*TMSSAK
Trigger: CTTCGCGGAGCTCATCGTCAAGGAGCCCCCAACTCC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCTGGAAAGTGACCTCCTaGCCCTCTTTGCGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPWKVTS*PSLRPS
Trigger: TGAGGGGCGCAAAGAGGGCAAGGAGGTCACTTTCCA...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCTGGGGCTCCTCCCACTaGAGGAAGATCATGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPWGSSH*RKIMSS
Trigger: GGAGGACATGATCTTCCTCAAGTGGGAGGAGCCCCA...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGGGTGATGAGACCATaGGGCTCCTGGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSWVMRP*GSWGSS
Trigger: GGAGGAGCCCCAGGAGCCCAATGGTCTCATCACCCA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGTCTCATTGCGGAGCTaGGAGATGGTACGTCGTGGG +
Preference number: 5 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDVSLRS*EMVRRG
Trigger: CCCACGACGTACCATCTCCAAGCTCCGCAATGAGAC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGACCTCCAGGGGCCGCTaGCTTTCCTTGCAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWTSRGR*LSLQAA
Trigger: AGCTGCCTGCAAGGAAAGCAAGCGGCCCCTGGAGGT...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp TCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTGCCCCAGACTGGTTCAGCTGGTaGAGCATGACGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SSPVQDGGSGPECAVGAPDWFSW*SMTMEV
Trigger: CACCTCCATCGTCATGCTCAACCAGCTGAACCAGTC...TGGGGCACCCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGGGGCGAGGTGACTTCATTCTGCAACAGTGGGTCAGGCAGGGAAGGAGCCCCCTGCAAGAAGGCCTTCTaGGAGTCAGGTGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: GGEVTSFCNSGSGREGAPCKKAF*ESGVSR
Trigger: CCGGGACACACCTGACTCCAAGAAGGCCTTCTTGCA...GGGGGCTCCTTCCCTGCCTGACCCACTGTTGCAGAATGAAGTCACCTCGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGGCTGGGCTGCAGACTaGCTAAGCTCCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWGWAAD*LSSSLA
Trigger: GGCCAAGGAGGAGCTTAGCAAGTCTGCAGCCCAGCC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 90 bp CCAGGGTGCCCGGGCTGTGCCCGTCCCGGCTGTACAGGAAGTAGCTaGACTGCACACAGTGGGTATCATTCTCGCTCAGGCTCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PGCPGCARPGCTGSS*TAHSGYHSRSGSGR
Trigger: TCTTCCAGAGCCTGAGCGAGAATGATACCCACTGTGTGCAGTTCAGCTACTTCCTGTACAGCCGGGACGGGCACAGCCCGGGCACCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 90 bp CATACGCCAGAAGTCATAGACCATCTCAGGCTTCGGCCCTGGGGATaGAGGCAGAGGGTGCCTGTCCCTGAGACAAGGTCTCCACCCCAG +
Preference number: 5 (lower is better)
Translates to: HTPEVIDHLRLRPWG*RQRVPVPETRSPPQ
Trigger: CTGGGGTGGAGACCTTGTCTCAGGGACAGGCACCCTCTGCCTGCATCCCCAGGGCCGAAGCCTGAGATGGTCTATGACTTCTGGCGTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526080.1
CDS CCA 90 bp GGGTGGATTCGCACTTGCTCCCACTGGAAGTCATCGTACTGGGCCTaGCTGTACTCGCAGGGCACTGCTGGGTCACTTGCCTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: GWIRTCSHWKSSYWA*LYSQGTAGSLASSK
Trigger: CTTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp GGGCTCCTGGGGCTCCTCCCACTTGAGGAAGATCATGTCCTCCAGTaGAGTGAAGGTCAGGGACTCGGCTGCAATCCCACTGGGCACATC +
Preference number: 5 (lower is better)
Translates to: GLLGLLPLEEDHVLQ*SEGQGLGCNPTGHI
Trigger: GATGTGCCCAGTGGGATTGCAGCCGAGTCCCTGACCTTCACTCCACTGGAGGACATGATCTTCCTCAAGTGGGAGGAGCCCCAGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp CATAAACTCCACCTCCATGAGGCCATATTGCTGCCGGCCTGGCTCTaGCCAGTACTGCAGGCAGGGCCAGGCGGAGTTGGACTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: HKLHLHEAILLPAWL*PVLQAGPGGVGLVQ
Trigger: CTGAACCAGTCCAACTCCGCCTGGCCCTGCCTGCAGTACTGGCCAGAGCCAGGCCGGCAGCAATATGGCCTCATGGAGGTGGAGTTTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000493601.5
CDS CCA 90 bp CATAAACTCCACCTCCATGAGGCCATATTGCTGCCGGCCTGGCTCTaGCCAGTACTGCAGGCAGGGCTGGGCATAAGCACGGAGAGGGGA +
Preference number: 5 (lower is better)
Translates to: HKLHLHEAILLPAWL*PVLQAGLGISTERG
Trigger: TCCCCTCTCCGTGCTTATGCCCAGCCCTGCCTGCAGTACTGGCCAGAGCCAGGCCGGCAGCAATATGGCCTCATGGAGGTGGAGTTTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492954.1
CDS-3UTR CAA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCCGCCCCGCTCTGCCGTaGCAAGAGGAAGCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPRPALP*QEEAFG
Trigger: GCCGAACGCTTCCTCTTGCAACGGCAGAGCGGGGCG...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGGAGTTGGGGGCTCCTaGACGATGAGCTCCGCGAAG +
Preference number: 5 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQGVGGS*TMSSAK
Trigger: CTTCGCGGAGCTCATCGTCAAGGAGCCCCCAACTCC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCGGTACTCAATCTCCTaGCGCACGATCGGCCCGTCG +
Preference number: 5 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQRYSIS*RTIGPS
Trigger: CGACGGGCCGATCGTGCGCAAGGAGATTGAGTACCG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGCAAAAGCCAGGCCTTaGGGGGCCCTCATGGGCTCT +
Preference number: 5 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQAKARP*GALMGS
Trigger: AGAGCCCATGAGGGCCCCCAAAGGCCTGGCTTTTGC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATGTAGCGGCTGACACCTaGCTCTGTCTTCACACACTC +
Preference number: 5 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDVAADT*LCLHTL
Trigger: GAGTGTGTGAAGACAGAGCAAGGTGTCAGCCGCTAC...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCAGGGCCAGGCGGAGTaGGACTGGTTCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQQGQAE*DWFSWL
Trigger: CAACCAGCTGAACCAGTCCAACTCCGCCTGGCCCTG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCTCCATGAGGCCATATaGCTGCCGGCCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRLHEAI*LPAWLW
Trigger: CCAGAGCCAGGCCGGCAGCAATATGGCCTCATGGAG...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCTGCAAGAAGGCCTTCTaGGAGTCAGGTGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPCKKAF*ESGVSR
Trigger: CCGGGACACACCTGACTCCAAGAAGGCCTTCTTGCA...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCAGGGCCCCGCTATCTaGACTCCAGCCCCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQQGPAI*TPAPPS
Trigger: ACTTGGAGGGGCTGGAGTCAAGATAGCGGGGCCCTG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp CTGGGTGCAGGTTGGAGAAGACATGGTAGGTCTCATTGCGGAGCTTaGAGATGGTACGTCGTGGGCCTGGCACGTTCACTGCCGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LGAGWRRHGRSHCGA*RWYVVGLARSLPGL
Trigger: CAGACCCGGCAGTGAACGTGCCAGGCCCACGACGTACCATCTCCAAGCTCCGCAATGAGACCTACCATGTCTTCTCCAACCTGCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp TGCGGGCCCGCACGGAGAACAGGTAGGTGGTGCCTGGGTGCAGGTTaGAGAAGACATGGTAGGTCTCATTGCGGAGCTTGGAGATGGTAC +
Preference number: 5 (lower is better)
Translates to: CGPARRTGRWCLGAG*RRHGRSHCGAWRWY
Trigger: GTACCATCTCCAAGCTCCGCAATGAGACCTACCATGTCTTCTCCAACCTGCACCCAGGCACCACCTACCTGTTCTCCGTGCGGGCCCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp CCCGACCTCTCCCTCCCCAGGGTGGGAACCTCAGACAGCGTTTCTTaGGCCTGTTCAGGGCTTTGTCTTGTGCTGATGGCATCAAGGGAC +
Preference number: 5 (lower is better)
Translates to: PDLSLPRVGTSDSVS*ACSGLCLVLMASRD
Trigger: GTCCCTTGATGCCATCAGCACAAGACAAAGCCCTGAACAGGCCCAAGAAACGCTGTCTGAGGTTCCCACCCTGGGGAGGGAGAGGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531385.1
CDS-3UTR CAA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCAGGGTGGATTCGCACTaGCTCCCACTGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPRVDSH*LPLEVI
Trigger: GATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCT...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCGTAGCGGCTGACACCTaGCTCTGTCTTCACACACTC +
Preference number: 5 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPVAADT*LCLHTL
Trigger: GAGTGTGTGAAGACAGAGCAAGGTGTCAGCCGCTAC...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGGGGCTCCTCCCACTaGAGGAAGATCATGTCCTCC +
Preference number: 5 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSWGSSH*RKIMSS
Trigger: GGAGGACATGATCTTCCTCAAGTGGGAGGAGCCCCA...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTCTCATTGCGGAGCTaGGAGATGGTACGTCGTGGG +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWVSLRS*EMVRRG
Trigger: CCCACGACGTACCATCTCCAAGCTCCGCAATGAGAC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGGCCGCTTGCTTTCCTaGCAGGCAGCTTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQGRLLS*QAAFLA
Trigger: TGCCAGGAAAGCTGCCTGCAAGGAAAGCAAGCGGCC...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCTCAGTCTGGATCATGTaGACACGCCGGGAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPSVWIM*TRREQR
Trigger: TCTCTGCTCCCGGCGTGTCAACATGATCCAGACTGA...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CCCGCCCATGGGACAAGCGAAAGGCCCTGCCCACAGTGGAAGGGGGAGCAAGATAAAACGTCCACCAAGTaGTGGCAGCGGATCATCTCC +
Preference number: 5 (lower is better)
Translates to: PAHGTSERPCPQWKGEQDKTSTK*WQRIIS
Trigger: GGAGATGATCCGCTGCCACAACTTGGTGGACGTTTT...ATCTTGCTCCCCCTTCCACTGTGGGCAGGGCCTTTCGCTTGTCCCATGGGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACATTGCTAAGCTCCTCCTaGGCCCACCACCCGCCCATG +
Preference number: 5 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTLLSSS*AHHPPM
Trigger: CATGGGCGGGTGGTGGGCCAAGGAGGAGCTTAGCAA...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GCCCACAGTGGAAGGGGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCAACCCCAGGGGCTGTaGTTCAGCCTTGCAGATTGT +
Preference number: 5 (lower is better)
Translates to: AHSGRGSKIAQHPLQCLPQPQGL*FSLADC
Trigger: ACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTG...GGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCCCCTTCCACTGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp ATCATTCTCGCTCAGGCTCTGGAAGATGACATGGGCTCGCTGGCCTaGGGCATGCTGGGAAGTGTTGACCATCAAGTAGGAGCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: IILAQALEDDMGSLA*GMLGSVDHQVGAVG
Trigger: CCCCACGGCTCCTACTTGATGGTCAACACTTCCCAGCATGCCCCAGGCCAGCGAGCCCATGTCATCTTCCAGAGCCTGAGCGAGAATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCGCACTGCTGGGTCACTaGCCTCCTCGAAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPALLGH*PPRRCS
Trigger: GCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTGC...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGGAGTTGGGGGCTCCTaGACGATGAGCTCCGCGAAG +
Preference number: 5 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIGVGGS*TMSSAK
Trigger: CTTCGCGGAGCTCATCGTCAAGGAGCCCCCAACTCC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTATGGGCTCTGCGCATTaGGTGCGGCTGATGAGGGGT +
Preference number: 5 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFMGSAH*VRLMRG
Trigger: ACCCCTCATCAGCCGCACCAAATGCGCAGAGCCCAT...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCGCAAAAGCCAGGCCTTaGGGGGCCCTCATGGGCTCT +
Preference number: 5 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIAKARP*GALMGS
Trigger: AGAGCCCATGAGGGCCCCCAAAGGCCTGGCTTTTGC...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGGTAGCGGCTGACACCTaGCTCTGTCTTCACACACTC +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWVAADT*LCLHTL
Trigger: GAGTGTGTGAAGACAGAGCAAGGTGTCAGCCGCTAC...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGCCGCTTGCTTTCCTaGCAGGCAGCTTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTGRLLS*QAAFLA
Trigger: TGCCAGGAAAGCTGCCTGCAAGGAAAGCAAGCGGCC...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGCGGCTGCCCTTGACCTaGTCTTTCTTCTTTGTGGCG +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWRLPLT*SFFFVA
Trigger: CGCCACAAAGAAGAAAGACAAGGTCAAGGGCAGCCG...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp AGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCTCCATGCTGCGGTTCTaGTCGCGGTTCCGGGGCAAC +
Preference number: 5 (lower is better)
Translates to: RGWARWNPKCQVPVHPLPSMLRF*SRFRGN
Trigger: GTTGCCCCGGAACCGCGACAAGAACCGCAGCATGGA...GGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCTCCATGCTGCGGTTCTaGTCGCGGTTCCGGGGCAAC +
Preference number: 5 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTSMLRF*SRFRGN
Trigger: GTTGCCCCGGAACCGCGACAAGAACCGCAGCATGGA...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCAGGGCCAGGCGGAGTaGGACTGGTTCAGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTQGQAE*DWFSWL
Trigger: CAACCAGCTGAACCAGTCCAACTCCGCCTGGCCCTG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACTCCATGAGGCCATATaGCTGCCGGCCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: IETCFPRTFRGWARWNPKLHEAI*LPAWLW
Trigger: CCAGAGCCAGGCCGGCAGCAATATGGCCTCATGGAG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGTGCAAGAAGGCCTTCTaGGAGTCAGGTGTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQCKKAF*ESGVSR
Trigger: CCGGGACACACCTGACTCCAAGAAGGCCTTCTTGCA...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGCATCCACTCCAGTGCTaGCCCCATGGGAGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWHPLQC*PHGSVF
Trigger: AAACACACTCCCATGGGGCAAGCACTGGAGTGGATG...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 90 bp CGGCCTCAGCAGCACGGTGATGGTGTTCTCAGACTCGCCCAGGGGTaGCGGCATGTCGGCATAATCAAAGCTGGGAGCAGAGATGTTAGT +
Preference number: 5 (lower is better)
Translates to: RPQQHGDGVLRLAQG*RHVGIIKAGSRDVS
Trigger: ACTAACATCTCTGCTCCCAGCTTTGATTATGCCGACATGCCGTCACCCCTGGGCGAGTCTGAGAACACCATCACCGTGCTGCTGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp GCAGGTTGGAGAAGACATGGTAGGTCTCATTGCGGAGCTTGGAGATaGTACGTCGTGGGCCTGGCACGTTCACTGCCGGGTCTGATGACT +
Preference number: 5 (lower is better)
Translates to: AGWRRHGRSHCGAWR*YVVGLARSLPGLMT
Trigger: AGTCATCAGACCCGGCAGTGAACGTGCCAGGCCCACGACGTACCATCTCCAAGCTCCGCAATGAGACCTACCATGTCTTCTCCAACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGAGGGTGGATTCGCACTaGCTCCCACTGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRRVDSH*LPLEVI
Trigger: GATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCT...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCATGGGCTCTGCGCATTaGGTGCGGCTGATGAGGGGT +
Preference number: 5 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTMGSAH*VRLMRG
Trigger: ACCCCTCATCAGCCGCACCAAATGCGCAGAGCCCAT...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGGCCGCTTGCTTTCCTaGCAGGCAGCTTTCCTGGCA +
Preference number: 5 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTGRLLS*QAAFLA
Trigger: TGCCAGGAAAGCTGCCTGCAAGGAAAGCAAGCGGCC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGCGGCTGCCCTTGACCTaGTCTTTCTTCTTTGTGGCG +
Preference number: 5 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQRLPLT*SFFFVA
Trigger: CGCCACAAAGAAGAAAGACAAGGTCAAGGGCAGCCG...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGTCAGTCTGGATCATGTaGACACGCCGGGAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQSVWIM*TRREQR
Trigger: TCTCTGCTCCCGGCGTGTCAACATGATCCAGACTGA...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACTGATCTTCCTCGCCAGTCCAGGATGGTGGGTCTGGCCCTGAGTGTGCAGTGGAAAACGTCCACCAAGTaGTGGCAGCGGATCATCTCC +
Preference number: 5 (lower is better)
Translates to: TDLPRQSRMVGLALSVQWKTSTK*WQRIIS
Trigger: GGAGATGATCCGCTGCCACAACTTGGTGGACGTTTT...CCACTGCACACTCAGGGCCAGACCCACCATCCTGGACTGGCGAGGAAGATCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGCCTCAACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCAAAACGTCCACCAAGTaGTGGCAGCGGATCATCTCC +
Preference number: 5 (lower is better)
Translates to: GLNPRGCCSALQIVTGPSKTSTK*WQRIIS
Trigger: GGAGATGATCCGCTGCCACAACTTGGTGGACGTTTT...GCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACCCATGGGAGTGTGTTaGGGCAGAGCAGGAGGCACT +
Preference number: 5 (lower is better)
Translates to: IETCFPRTFRGWARWNPKPMGVC*GRAGGT
Trigger: AGTGCCTCCTGCTCTGCCCAAACACACTCCCATGGG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 90 bp ATAATCAAAGCTGGGAGCAGAGATGTTAGTGGTTATCTCAGTGAGTaGCGCCTGGCCGAAGCCTTTGCCTGTGCGGGCCCGCACGGAGAA +
Preference number: 5 (lower is better)
Translates to: IIKAGSRDVSGYLSE*RLAEAFACAGPHGE
Trigger: TTCTCCGTGCGGGCCCGCACAGGCAAAGGCTTCGGCCAGGCGGCACTCACTGAGATAACCACTAACATCTCTGCTCCCAGCTTTGATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS CCA 90 bp TGCACACAGTGGGTATCATTCTCGCTCAGGCTCTGGAAGATGACATaGGCTCGCTGGCCTGGGGCATGCTGGGAAGTGTTGACCATCAAG +
Preference number: 5 (lower is better)
Translates to: CTQWVSFSLRLWKMT*ARWPGACWEVLTIK
Trigger: CTTGATGGTCAACACTTCCCAGCATGCCCCAGGCCAGCGAGCCCATGTCATCTTCCAGAGCCTGAGCGAGAATGATACCCACTGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGGAGCAAGATAGCCCAGCATCCACTCCAGTGCTTGCCCCATGGGAGTGTGTTTTCAGTCTGGATCATGTaGACACGCCGGGAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: GSKIAQHPLQCLPHGSVFSVWIM*TRREQR
Trigger: TCTCTGCTCCCGGCGTGTCAACATGATCCAGACTGA...AAACACACTCCCATGGGGCAAGCACTGGAGTGGATGCTGGGCTATCTTGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACACATCCACTCCAGTGCTaGCCCCATGGGAGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: QGLLFSLADCHWPKLSRTHPLQC*PHGSVF
Trigger: AAACACACTCCCATGGGGCAAGCACTGGAGTGGATG...TGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 90 bp CTTGCTCTGTCTTCACACACTCTCGGATGGTCTGGTTGTGGCTGCTaGCCAGGGTGTAGTGATAGCACAGCGACACAGTATAGGTGTGGC +
Preference number: 5 (lower is better)
Translates to: LALSSHTLGWSGCGC*PGCSDSTATQYRCG
Trigger: GCCACACCTATACTGTGTCGCTGTGCTATCACTACACCCTGGGCAGCAGCCACAACCAGACCATCCGAGAGTGTGTGAAGACAGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000527027.1
CDS-3UTR CAA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGCACTGCTGGGTCACTaGCCTCCTCGAAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRALLGH*PPRRCS
Trigger: GCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTGC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCGCCCCGCTCTGCCGTaGCAAGAGGAAGCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRPALP*QEEAFG
Trigger: GCCGAACGCTTCCTCTTGCAACGGCAGAGCGGGGCG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGACGGTACTCAATCTCCTaGCGCACGATCGGCCCGTCG +
Preference number: 5 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRRYSIS*RTIGPS
Trigger: CGACGGGCCGATCGTGCGCAAGGAGATTGAGTACCG...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGCAAAAGCCAGGCCTTaGGGGGCCCTCATGGGCTCT +
Preference number: 5 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRAKARP*GALMGS
Trigger: AGAGCCCATGAGGGCCCCCAAAGGCCTGGCTTTTGC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ATTGAGACCTGCTTCCCCAGGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAACGGCTGCCCTTGACCTaGTCTTTCTTCTTTGTGGCG +
Preference number: 5 (lower is better)
Translates to: IETCFPRTFRGWARWNPKRLPLT*SFFFVA
Trigger: CGCCACAAAGAAGAAAGACAAGGTCAAGGGCAGCCG...TTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCCTGGGGAAGCAGGTCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCCTCAGGCTTCGGCCCTaGAGTGGCTATGAAGTGGTT +
Preference number: 5 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTLRLRP*SGYEVV
Trigger: AACCACTTCATAGCCACTCAAGGGCCGAAGCCTGAG...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGATCCATGCTGCGGTTCTaGTCGCGGTTCCGGGGCAAC +
Preference number: 5 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRSMLRF*SRFRGN
Trigger: GTTGCCCCGGAACCGCGACAAGAACCGCAGCATGGA...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp ACAGTCAGTGTGCCCCACTGGCTATTCAGAATTGAGACCTGCTTCCCCAGGACCGACTGGTTCAGCTGGTaGAGCATGACGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: TVSVPHWLFRIETCFPRTDWFSW*SMTMEV
Trigger: CACCTCCATCGTCATGCTCAACCAGCTGAACCAGTC...GGTCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGTGGGGCACACTGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ACCCCAGGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGTTCACCGGCTTCCCTTaGCGGATGATGACAATGATG +
Preference number: 5 (lower is better)
Translates to: TPGAVVQPCRLSLAQAEQFTGFP*RMMTMM
Trigger: CATCATTGTCATCATCCGCAAAGGGAAGCCGGTGAA...CTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCCTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGGGCTGTTGTTCAGCCTTGCAGATTGTCACTGGCCCAAGCTGAGCAGGACAGGACTGGCTATTCAGAATaGAGACCTGCTTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GAVVQPCRLSLAQAEQDRTGYSE*RPASPG
Trigger: TCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGT...CCTGTCCTGCTCAGCTTGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 90 bp CACCTTGCTCTGTCTTCACACACTCTCGGATGGTCTGGTTGTGGCTaGTGCCCAGGGTGTAGTGATAGCACAGCGACACAGTATAGGTGT +
Preference number: 5 (lower is better)
Translates to: HLALSSHTLGWSGCG*CPGCSDSTATQYRC
Trigger: ACACCTATACTGTGTCGCTGTGCTATCACTACACCCTGGGCAGCAGCCACAACCAGACCATCCGAGAGTGTGTGAAGACAGAGCAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000527027.1
CDS CCA 90 bp TGGCCGAGCTTACTCCCTGCCTCCGCGCTTCGGCATCTGCTATTTTaGCTGCCTAGGCCAAATTTCCCAAATGTCTATATGGCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: WPSLLPASALRHLLF*LPRPNFPNVYMAVS
Trigger: GGAGACAGCCATATAGACATTTGGGAAATTTGGCCTAGGCAGCCAAAATAGCAGATGCCGAAGCGCGGAGGCAGGGAGTAAGCTCGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465525.6
CDS-3UTR CAA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTGGGCACGGGCCATGGTaGGAGCGTCGCCGCCCGTCC +
Preference number: 5 (lower is better)
Translates to: HSESTFIYKALYKHQLMPGHGPW*ERRRPS
Trigger: GGACGGGCGGCGACGCTCCAACCATGGCCCGTGCCC...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAATGGGCTCTGCGCATTaGGTGCGGCTGATGAGGGGT +
Preference number: 5 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRMGSAH*VRLMRG
Trigger: ACCCCTCATCAGCCGCACCAAATGCGCAGAGCCCAT...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAACCTCCTTGCCCTCTTaGCGCCCCTCAGGGTTAGTG +
Preference number: 5 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRTSLPS*RPSGLV
Trigger: CACTAACCCTGAGGGGCGCAAAGAGGGCAAGGAGGT...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCGGTACTCAATCTCCTaGCGCACGATCGGCCCGTCG +
Preference number: 5 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRYSIS*RTIGPS
Trigger: CGACGGGCCGATCGTGCGCAAGGAGATTGAGTACCG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp GGACCTTCAGGGGCTGGGCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCTTCACCGGCTTCCCTTaGCGGATGATGACAATGATG +
Preference number: 5 (lower is better)
Translates to: GPSGAGPDGILNAKSQYIFTGFP*RMMTMM
Trigger: CATCATTGTCATCATCCGCAAAGGGAAGCCGGTGAA...GATGTACTGGGACTTGGCATTTAGGATTCCATCTGGCCCAGCCCCTGAAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCAGGGCCCCGCTATCTaGACTCCAGCCCCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: HVYLQSALQTSAYASPQPQGPAI*TPAPPS
Trigger: ACTTGGAGGGGCTGGAGTCAAGATAGCGGGGCCCTG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS GCA 90 bp GAGAGTCTTCACACAGTTGTAAATGTCCACGACGCCCTCACACTCTaGCATGTCCAGCATCACATCCAGGACGATATAGCAACCTGTGCG +
Preference number: 5 (lower is better)
Translates to: ESLHTVVNVHDALTL*HVQHHIQDDIATCA
Trigger: CGCACAGGTTGCTATATCGTCCTGGATGTGATGCTGGACATGGCAGAGTGTGAGGGCGTCGTGGACATTTACAACTGTGTGAAGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGACTCAGGCTTCGGCCCTaGAGTGGCTATGAAGTGGTT +
Preference number: 5 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRLRLRP*SGYEVV
Trigger: AACCACTTCATAGCCACTCAAGGGCCGAAGCCTGAG...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGACTGGTTCAGCTGGTaGAGCATGACGATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRDWFSW*SMTMEV
Trigger: CACCTCCATCGTCATGCTCAACCAGCTGAACCAGTC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GGCTGCTCTGTGGCATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACACTCCATGAGGCCATATaGCTGCCGGCCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GCSVAFREHVYLQSALQTLHEAI*LPAWLW
Trigger: CCAGAGCCAGGCCGGCAGCAATATGGCCTCATGGAG...TGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATGCCACAGAGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428026.6
CDS-3UTR CAA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCCATGGGAGTGTGTTaGGGCAGAGCAGGAGGCACT +
Preference number: 5 (lower is better)
Translates to: HVYLQSALQTSAYASPQPPMGVC*GRAGGT
Trigger: AGTGCCTCCTGCTCTGCCCAAACACACTCCCATGGG...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGAGGCTGTTGTTCAGCCTaGCAGATTGTCACTGGCCCA +
Preference number: 5 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRGCCSA*QIVTGP
Trigger: TGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCC...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAGGCTGTTGTTCAGCCTaGCAGATTGTCACTGGCCCA +
Preference number: 5 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRGCCSA*QIVTGP
Trigger: TGGGCCAGTGACAATCTGCAAGGCTGAACAACAGCC...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp ATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCCCTGCGACAACCCCAGGGGCTGTaGTTCAGCCTTGCAGATTGT +
Preference number: 5 (lower is better)
Translates to: IYKALYKHQLMPPHSPLRQPQGL*FSLADC
Trigger: ACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTG...TCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCTGGAAAGTGACCTCCTaGCCCTCTTTGCGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: HVYLQSALQTSAYASPQPWKVTS*PSLRPS
Trigger: TGAGGGGCGCAAAGAGGGCAAGGAGGTCACTTTCCA...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCTGGGGCTCCTCCCACTaGAGGAAGATCATGTCCTCC +
Preference number: 5 (lower is better)
Translates to: HVYLQSALQTSAYASPQPWGSSH*RKIMSS
Trigger: GGAGGACATGATCTTCCTCAAGTGGGAGGAGCCCCA...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACCCCATGGGAGTGTGTTaGGGCAGAGCAGGAGGCACT +
Preference number: 5 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHPMGVC*GRAGGT
Trigger: AGTGCCTCCTGCTCTGCCCAAACACACTCCCATGGG...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp CACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACAGCCCAGGGTGGATTCGCACTaGCTCCCACTGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: HVYLQSALQTSAYASPQPRVDSH*LPLEVI
Trigger: GATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCT...GGGCTGTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp GCCAGATGGAATCCTAAATGCCAAGTCCCAGTACATCCTCTACCCACATGCAGAACTGGCTATTCAGAATaGAGACCTGCTTCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ARWNPKCQVPVHPLPTCRTGYSE*RPASPG
Trigger: TCCTGGGGAAGCAGGTCTCAATTCTGAATAGCCAGT...TCTGCATGTGGGTAGAGGATGTACTGGGACTTGGCATTTAGGATTCCATCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS-3UTR CAA 90 bp GAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCCCCACCTCAGGCTTCGGCCCTaGAGTGGCTATGAAGTGGTT +
Preference number: 5 (lower is better)
Translates to: ESTFIYKALYKHQLMPPHLRLRP*SGYEVV
Trigger: AACCACTTCATAGCCACTCAAGGGCCGAAGCCTGAG...GTGGGGAGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTACCTCCTTGCCCTCTTaGCGCCCCTCAGGGTTAGTG +
Preference number: 5 (lower is better)
Translates to: HSESTFIYKALYKHQLMPTSLPS*RPSGLV
Trigger: CACTAACCCTGAGGGGCGCAAAGAGGGCAAGGAGGT...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTCAACCCCAGGGGCTGTaGTTCAGCCTTGCAGATTGT +
Preference number: 5 (lower is better)
Translates to: HSESTFIYKALYKHQLMPQPQGL*FSLADC
Trigger: ACAATCTGCAAGGCTGAACAACAGCCCCTGGGGTTG...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS-3UTR CAA 90 bp CATTCAGAGAGCACGTTTATTTACAAAGCGCTTTACAAACATCAGCTTATGCCTTTCACCGGCTTCCCTTaGCGGATGATGACAATGATG +
Preference number: 5 (lower is better)
Translates to: HSESTFIYKALYKHQLMPFTGFP*RMMTMM
Trigger: CATCATTGTCATCATCCGCAAAGGGAAGCCGGTGAA...AGGCATAAGCTGATGTTTGTAAAGCGCTTTGTAAATAAACGTGCTCTCTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373779.8
ENST00000428026.6
CDS GCA 72 bp CCGCGCGGGGCCTGGGACACACAGCGGTACAGGTCCTaGTCGGCGCGGCTCACGGCAGCCAGCGGGAAAGTG +
Preference number: 6 (lower is better)
Translates to: PRGAWDTQRYRS*SARLTAASGKV
Trigger: CACTTTCCCGCTGGCTGCCGTGAGCCGCGCCGAGCAGGACCTGTACCGCTGTGTGTCCCAGGCCCCGCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp TCCGCGAAGTTAGAGACGCCCGCGCCGCGCGGGGCCTaGGACACACAGCGGTACAGGTCCTGCTCGGCGCGG +
Preference number: 6 (lower is better)
Translates to: SAKLETPAPRGA*DTQRYRSCSAR
Trigger: CCGCGCCGAGCAGGACCTGTACCGCTGTGTGTCCCAGGCCCCGCGCGGCGCGGGCGTCTCTAACTTCGCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 72 bp CCGGAGTCTCGGTCTCCGGCGCGCAGAGCTGGAAGGTaGGTGCCAGCACGAGCGCCTGGGCACGGGCCATGG +
Preference number: 6 (lower is better)
Translates to: PESRSPARRAGR*VPARAPGHGPW
Trigger: CCATGGCCCGTGCCCAGGCGCTCGTGCTGGCACTCACCTTCCAGCTCTGCGCGCCGGAGACCGAGACTCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 72 bp CGGGGTCGAGGTGCCACAGCTTGTAGGTCTGCAGGCTaGCGGCGTGCACCTCAGCCCAGGGCCCGCGCGCCA +
Preference number: 6 (lower is better)
Translates to: RGRGATACRSAG*RRAPQPRARAP
Trigger: TGGCGCGCGGGCCCTGGGCTGAGGTGCACGCCGTCAGCCTGCAGACCTACAAGCTGTGGCACCTCGACCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000527027.1
CDS CCA 72 bp GCGCAGAGCTGGAAGGTGAGTGCCAGCACGAGCGCCTaGGCACGGGCCATGGTTGGAGCGTCGCCGCCCGTC +
Preference number: 6 (lower is better)
Translates to: AQSWKVSASTSA*ARAMVGASPPV
Trigger: GACGGGCGGCGACGCTCCAACCATGGCCCGTGCCCAGGCGCTCGTGCTGGCACTCACCTTCCAGCTCTGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
CDS CCA 72 bp GCTCTGCCCGCGGCCATGCACTGGAACGACGCGTTCTaGCCCGCGTTGACCTCCACGTCGCCCAGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: ALPAAMHWNDAF*PALTSTSPRRE
Trigger: CTCCCGCCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACGCGTCGTTCCAGTGCATGGCCGCGGGCAGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp CATGGGCTCTGCGCATTTGGTGCGGCTGATGAGGGGTaGCCCAGGGCGGCCAGTGCCGCCGTCTCCGGGACG +
Preference number: 6 (lower is better)
Translates to: HGLCAFGAADEG*PRAASAAVSGT
Trigger: CGTCCCGGAGACGGCGGCACTGGCCGCCCTGGGCCACCCCTCATCAGCCGCACCAAATGCGCAGAGCCCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000527027.1
CDS TCA 72 bp GCGCACCGCGGCCCTGTGCCGGCCTCAGCAGCACGGTaGTGGTGTTCTCAGACTCGCCCAGGGGTGACGGCA +
Preference number: 6 (lower is better)
Translates to: AHRGPVPASAAR*WCSQTRPGVTA
Trigger: TGCCGTCACCCCTGGGCGAGTCTGAGAACACCATCACCGTGCTGCTGAGGCCGGCACAGGGCCGCGGTGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp GCCTCGGGCCAGCGCCGCCTCGAAGGTCAATGGCACTaGGAAGCAGTCCTGTCCACCTGGCTCCCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: ASGQRRLEGQWH*EAVLSTWLPPQ
Trigger: CTGCGGCGGGAGCCAGGTGGACAGGACTGCTTCCCAGTGCCATTGACCTTCGAGGCGGCGCTGGCCCGAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS CAA 90 bp GCTCTGCCCGCGGCCATGCACTGGAACGACGCGTTCTGGCCCGCGTaGACCTCCACGTCGCCCAGGCGGGAGAAGTGTGGGGCCTTTGCG +
Preference number: 6 (lower is better)
Translates to: ALPAAMHWNDAFWPA*TSTSPRREKCGAFA
Trigger: CGCAAAGGCCCCACACTTCTCCCGCCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACGCGTCGTTCCAGTGCATGGCCGCGGGCAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 72 bp CGGCCATGCACTGGAACGACGCGTTCTGGCCCGCGTTaGCCTCCACGTCGCCCAGGCGGGAGAAGTGTGGGG +
Preference number: 6 (lower is better)
Translates to: RPCTGTTRSGPR*PPRRPGGRSVG
Trigger: CCCCACACTTCTCCCGCCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACGCGTCGTTCCAGTGCATGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp GCCGTTGCAAGAGGAAGCGTTCGGCCTCGGCCGCTCTaGCCGCGGCCATGCACTGGAACGACGCGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: AVARGSVRPRPL*PRPCTGTTRSG
Trigger: GCCAGAACGCGTCGTTCCAGTGCATGGCCGCGGGCAGAGCGGCCGAGGCCGAACGCTTCCTCTTGCAACGGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp CACCAGGCCTCGGGCCAGCGCCGCCTCGAAGGTCAATaGCACTGGGAAGCAGTCCTGTCCACCTGGCTCCCG +
Preference number: 6 (lower is better)
Translates to: HQASGQRRLEGQ*HWEAVLSTWLP
Trigger: CGGGAGCCAGGTGGACAGGACTGCTTCCCAGTGCCATTGACCTTCGAGGCGGCGCTGGCCCGAGGCCTGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS CAA 72 bp GCGGCCATGCACTGGAACGACGCGTTCTGGCCCGCGTaGACCTCCACGTCGCCCAGGCGGGAGAAGTGTGGG +
Preference number: 6 (lower is better)
Translates to: AAMHWNDAFWPA*TSTSPRREKCG
Trigger: CCCACACTTCTCCCGCCTGGGCGACGTGGAGGTCAACGCGGGCCAGAACGCGTCGTTCCAGTGCATGGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp CCACCAAGTTGTGGCAGCGGATCATCTCCAGGACCGTaGCGCAGGCGCAGAAGGTGCCGCTGCGTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: PPSCGSGSSPGP*RRRRRCRCVLP
Trigger: GGGGAGGACGCAGCGGCACCTTCTGCGCCTGCGCCACGGTCCTGGAGATGATCCGCTGCCACAACTTGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS TCA 72 bp CGGGCGTGGTGCTCTGCAGCGGGTGCAGGGTCACGATaGAGGCCGCACTCCGTGTGTAGCTGTCAGTCAGGG +
Preference number: 6 (lower is better)
Translates to: RAWCSAAGAGSR*RPHSVCSCQSG
Trigger: CCCTGACTGACAGCTACACACGGAGTGCGGCCTTCATCGTGACCCTGCACCCGCTGCAGAGCACCACGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000493601.5
CDS GCA 72 bp GACCATCAAGTAGGAGCCGTGGGGCAGGTCCGCAGGTaGCCGGGTGCCAGGGTGGATTCGCACTTGCTCCCA +
Preference number: 6 (lower is better)
Translates to: DHQVGAVGQVRR*PGARVDSHLLP
Trigger: TGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGCACCTGCGGACCTGCCCCACGGCTCCTACTTGATGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp CGCTGCGTCCTCCCCCGTTTAGGCAGTGCACGATGGTaGGCCCATCCCCACTCTCGGCCTGCCACTTGTCCA +
Preference number: 6 (lower is better)
Translates to: RCVLPRLGSARW*AHPHSRPATCP
Trigger: TGGACAAGTGGCAGGCCGAGAGTGGGGATGGGCGCACCATCGTGCACTGCCTAAACGGGGGAGGACGCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS CCA 72 bp CCGTGGGGCAGGTCCGCAGGTGCCCGGGTGCCAGGGTaGATTCGCACTTGCTCCCACTGGAAGTCATCGTAC +
Preference number: 6 (lower is better)
Translates to: PWGRSAGARVPG*IRTCSHWKSSY
Trigger: GTACGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGCACCTGCGGACCTGCCCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp TGCCGCTGCGTCCTCCCCCGTTTAGGCAGTGCACGATaGTGCGCCCATCCCCACTCTCGGCCTGCCACTTGT +
Preference number: 6 (lower is better)
Translates to: CRCVLPRLGSAR*CAHPHSRPATC
Trigger: ACAAGTGGCAGGCCGAGAGTGGGGATGGGCGCACCATCGTGCACTGCCTAAACGGGGGAGGACGCAGCGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS CAA 72 bp GGGCCTGGCTGTACTCGCAGGGCACTGCTGGGTCACTaGCCTCCTCGAAGGTGCAGCCAGCTGCCGGAGTCT +
Preference number: 6 (lower is better)
Translates to: GPGCTRRALLGH*PPRRCSQLPES
Trigger: AGACTCCGGCAGCTGGCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CAA 90 bp CATCGTACTGGGCCTGGCTGTACTCGCAGGGCACTGCTGGGTCACTaGCCTCCTCGAAGGTGCAGCCAGCTGCCGGAGTCTCGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: HRTGPGCTRRALLGH*PPRRCSQLPESRSP
Trigger: CGGAGACCGAGACTCCGGCAGCTGGCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CAA 90 bp GTGGGGCAGGTCCGCAGGTGCCCGGGTGCCAGGGTGGATTCGCACTaGCTCCCACTGGAAGTCATCGTACTGGGCCTGGCTGTACTCGCA +
Preference number: 6 (lower is better)
Translates to: VGQVRRCPGARVDSH*LPLEVIVLGLAVLA
Trigger: TGCGAGTACAGCCAGGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGCACCTGCGGACCTGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 72 bp CATGGGCTCGCTGGCCTGGGGCATGCTGGGAAGTGTTaGCCATCAAGTAGGAGCCGTGGGGCAGGTCCGCAG +
Preference number: 6 (lower is better)
Translates to: HGLAGLGHAGKC*PSSRSRGAGPQ
Trigger: CTGCGGACCTGCCCCACGGCTCCTACTTGATGGTCAACACTTCCCAGCATGCCCCAGGCCAGCGAGCCCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 72 bp CGGGCGTGGTGCTCTGCAGCGGGTGCAGGGTCACGATaGAGGCCGCACTCCGTGTGTAGCTCTGCAGGGAAA +
Preference number: 6 (lower is better)
Translates to: RAWCSAAGAGSR*RPHSVCSSAGK
Trigger: TTTCCCTGCAGAGCTACACACGGAGTGCGGCCTTCATCGTGACCCTGCACCCGCTGCAGAGCACCACGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465525.6
CDS GCA 72 bp TCCGCAGGTGCCCGGGTGCCAGGGTGGATTCGCACTTaGTCCCACTGGAAGTCATCGTACTGGGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SAGARVPGWIRT*SHWKSSYWAWL
Trigger: CAGCCAGGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGCACCTGCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp CACCTGGTACACACTGATGGGCGCACCGCGGCCCTGTaGCGGCCTCAGCAGCACGGTGATGGTGTTCTCAGA +
Preference number: 6 (lower is better)
Translates to: HLVHTDGRTAAL*RPQQHGDGVLR
Trigger: TCTGAGAACACCATCACCGTGCTGCTGAGGCCGGCACAGGGCCGCGGTGCGCCCATCAGTGTGTACCAGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS CAA 72 bp GTCCGCAGGTGCCCGGGTGCCAGGGTGGATTCGCACTaGCTCCCACTGGAAGTCATCGTACTGGGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: VRRCPGARVDSH*LPLEVIVLGLA
Trigger: AGCCAGGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGCACCTGCGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp GTCATCGTACTGGGCCTGGCTGTACTCGCAGGGCACTaGTGGGTCACTTGCCTCCTCGAAGGTGCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: VIVLGLAVLAGH*WVTCLLEGAAS
Trigger: GCTGGCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp CAGTGCACGATGGTGCGCCCATCCCCACTCTCGGCCTaGCACTTGTCCACCTCAGCCAGCAGGTGCAAGAAG +
Preference number: 6 (lower is better)
Translates to: QCTMVRPSPLSA*HLSTSASRCKK
Trigger: CTTCTTGCACCTGCTGGCTGAGGTGGACAAGTGGCAGGCCGAGAGTGGGGATGGGCGCACCATCGTGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS CCA 72 bp ATCGTACTGGGCCTGGCTGTACTCGCAGGGCACTGCTaGGTCACTTGCCTCCTCGAAGGTGCAGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: IVLGLAVLAGHC*VTCLLEGAASC
Trigger: GCAGCTGGCTGCACCTTCGAGGAGGCAAGTGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp GCCCGGGTGCCAGGGTGGATTCGCACTTGCTCCCACTaGAAGTCATCGTACTGGGCCTGGCTGTACTCGCAG +
Preference number: 6 (lower is better)
Translates to: ARVPGWIRTCSH*KSSYWAWLYSQ
Trigger: CTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCGAATCCACCCTGGCACCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp TCAGGTGTGTCCCGGTATGCAGACCAGCGCAGGAACTaGAAGTGCCGCACCAGCAGGTGCCCCTCCTGCAAC +
Preference number: 6 (lower is better)
Translates to: SGVSRYADQRRN*KCRTSRCPSCN
Trigger: GTTGCAGGAGGGGCACCTGCTGGTGCGGCACTTCCAGTTCCTGCGCTGGTCTGCATACCGGGACACACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS CCA 72 bp CACCTCCATGAGGCCATATTGCTGCCGGCCTGGCTCTaGCCAGTACTGCAGGCAGGGCTGGGCATAAGCACG +
Preference number: 6 (lower is better)
Translates to: HLHEAILLPAWL*PVLQAGLGIST
Trigger: CGTGCTTATGCCCAGCCCTGCCTGCAGTACTGGCCAGAGCCAGGCCGGCAGCAATATGGCCTCATGGAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492954.1
CDS GCA 72 bp GCTGGGAGCAGAGATGTTAGTGGTTATCTCAGTGAGTaGCGCCTGGCCGAAGCCTTTGCCTGTGCGGGCCCG +
Preference number: 6 (lower is better)
Translates to: AGSRDVSGYLSE*RLAEAFACAGP
Trigger: CGGGCCCGCACAGGCAAAGGCTTCGGCCAGGCGGCACTCACTGAGATAACCACTAACATCTCTGCTCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp CTGAGCTCAAGGCAGAGGCTGGCCGAGCTTACTCCCTaGCTCCGCGCTTCGGCATCTGCTATTTTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LSSRQRLAELTP*LRASASAILAA
Trigger: GGCAGCCAAAATAGCAGATGCCGAAGCGCGGAGGCAGGGAGTAAGCTCGGCCAGCCTCTGCCTTGAGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465525.6
CDS CCA 72 bp CGCACTTGCTCCCACTGGAAGTCATCGTACTGGGCCTaGCTGTACTCGCAGGGCACTGCTGGGTCACTTGCC +
Preference number: 6 (lower is better)
Translates to: RTCSHWKSSYWA*LYSQGTAGSLA
Trigger: GGCAAGTGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp CTTTGCCTGTGCGGGCCCGCACGGAGAACAGGTAGGTaGTGCCTGGGTGCAGGTTGGAGAAGACATGGTAGG +
Preference number: 6 (lower is better)
Translates to: LCLCGPARRTGR*CLGAGWRRHGR
Trigger: CCTACCATGTCTTCTCCAACCTGCACCCAGGCACCACCTACCTGTTCTCCGTGCGGGCCCGCACAGGCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp GCAGAGATGTTAGTGGTTATCTCAGTGAGTGCCGCCTaGCCGAAGCCTTTGCCTGTGCGGGCCCGCACGGAG +
Preference number: 6 (lower is better)
Translates to: AEMLVVISVSAA*PKPLPVRARTE
Trigger: CTCCGTGCGGGCCCGCACAGGCAAAGGCTTCGGCCAGGCGGCACTCACTGAGATAACCACTAACATCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp GGCCAGTACTGCAGGCAGGGCCAGGCGGAGTTGGACTaGTTCAGCTGGTTGAGCATGACGATGGAGGTGCAC +
Preference number: 6 (lower is better)
Translates to: GQYCRQGQAELD*FSWLSMTMEVH
Trigger: GTGCACCTCCATCGTCATGCTCAACCAGCTGAACCAGTCCAACTCCGCCTGGCCCTGCCTGCAGTACTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000493601.5
CDS CCA 72 bp TGGGCCATTTCTGATGTTGGTTGGCACACTGAGGCCTaGGTTGACAGGGTGGGCCCAGGCCTCTGGGGACCA +
Preference number: 6 (lower is better)
Translates to: WAISDVGWHTEA*VDRVGPGLWGP
Trigger: TGGTCCCCAGAGGCCTGGGCCCACCCTGTCAACCCAGGCCTCAGTGTGCCAACCAACATCAGAAATGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465525.6
CDS CCA 72 bp CCAGGCTGCCTCCAGTGGGCCATTTCTGATGTTGGTTaGCACACTGAGGCCTGGGTTGACAGGGTGGGCCCA +
Preference number: 6 (lower is better)
Translates to: PGCLQWAISDVG*HTEAWVDRVGP
Trigger: TGGGCCCACCCTGTCAACCCAGGCCTCAGTGTGCCAACCAACATCAGAAATGGCCCACTGGAGGCAGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465525.6
CDS TCA 72 bp CCGGGCTGTGCCCGTCCCGGCTGTACAGGAAGTAGCTaGACTGCACACAGTGGGTATCATTCTCGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: PGCARPGCTGSS*TAHSGYHSRSG
Trigger: GCCTGAGCGAGAATGATACCCACTGTGTGCAGTTCAGCTACTTCCTGTACAGCCGGGACGGGCACAGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp GCCGGGCAGAGTAGCCTCTCCGCTCCAGGGCAAAAGTaGGCACGACATACTCAGCCAGGGTCTCTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: AGQSSLSAPGQK*ARHTQPGSLSS
Trigger: TGAAGACAGAGACCCTGGCTGAGTATGTCGTGCGCACTTTTGCCCTGGAGCGGAGAGGCTACTCTGCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
ENST00000526080.1
CDS CCA 72 bp CAGATGCCCAGGATAAGCCCCATCTCCTCCGATCTCTaGGACACCTCCAGGGGCCGCTTGCTTTCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: QMPRISPISSDL*DTSRGRLLSLQ
Trigger: CTGCAAGGAAAGCAAGCGGCCCCTGGAGGTGTCCCAGAGATCGGAGGAGATGGGGCTTATCCTGGGCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
ENST00000531385.1
CDS CAA 72 bp ATCTCCTCCGATCTCTGGGACACCTCCAGGGGCCGCTaGCTTTCCTTGCAGGCAGCTTTCCTGGCAATGCGG +
Preference number: 6 (lower is better)
Translates to: ISSDLWDTSRGR*LSLQAAFLAMR
Trigger: CCGCATTGCCAGGAAAGCTGCCTGCAAGGAAAGCAAGCGGCCCCTGGAGGTGTCCCAGAGATCGGAGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
ENST00000531385.1
CDS CAA 90 bp CCCCGACCTCTCCCTCCCCAGGGTGGGAACCTCAGACAGCGTTTCTaGGGCCTGTTCAGGGCTTTGTCTTGTGCTGATGGCATCAAGGGA +
Preference number: 6 (lower is better)
Translates to: PRPLPPQGGNLRQRF*GLFRALSCADGIKG
Trigger: TCCCTTGATGCCATCAGCACAAGACAAAGCCCTGAACAGGCCCAAGAAACGCTGTCTGAGGTTCCCACCCTGGGGAGGGAGAGGTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531385.1
CDS TCA 72 bp CACAGTGGGTATCATTCTCGCTCAGGCTCTGGAAGATaGCATGGGCTCGCTGGCCTGGGGCATGCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: HSGYHSRSGSGR*HGLAGLGHAGK
Trigger: CTTCCCAGCATGCCCCAGGCCAGCGAGCCCATGTCATCTTCCAGAGCCTGAGCGAGAATGATACCCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 72 bp GCGTTTCTTGGGCCTGTTCAGGGCTTTGTCTTGTGCTaGTGGCATCAAGGGACACCCCACCCGAAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: AFLGPVQGFVLC*WHQGTPHPKAG
Trigger: GCCTGCCTTCGGGTGGGGTGTCCCTTGATGCCATCAGCACAAGACAAAGCCCTGAACAGGCCCAAGAAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531385.1
CDS CCA 72 bp TGGATTCGCACTTGCTCCCACTGGAAGTCATCGTACTaGGCCTGGCTGTACTCGCAGGGCACTGCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: WIRTCSHWKSSY*AWLYSQGTAGS
Trigger: TGACCCAGCAGTGCCCTGCGAGTACAGCCAGGCCCAGTACGATGACTTCCAGTGGGAGCAAGTGCGAATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp TCGGCTGCAATCCCACTGGGCACATCCTCATCCGTCTaGAAAGTGACCTCCTTGCCCTCTTTGCGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: SAAIPLGTSSSV*KVTSLPSLRPS
Trigger: TGAGGGGCGCAAAGAGGGCAAGGAGGTCACTTTCCAGACGGATGAGGATGTGCCCAGTGGGATTGCAGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp TGTGCGGGCCCGCACGGAGAACAGGTAGGTGGTGCCTaGGTGCAGGTTGGAGAAGACATGGTAGGTCTCATT +
Preference number: 6 (lower is better)
Translates to: CAGPHGEQVGGA*VQVGEDMVGLI
Trigger: AATGAGACCTACCATGTCTTCTCCAACCTGCACCCAGGCACCACCTACCTGTTCTCCGTGCGGGCCCGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp TGTCCACCTCAGCCAGCAGGTGCAAGAAGGCCTTCTTaGAGTCAGGTGTGTCCCGGTATGCAGACCAGCGCA +
Preference number: 6 (lower is better)
Translates to: CPPQPAGARRPS*SQVCPGMQTSA
Trigger: TGCGCTGGTCTGCATACCGGGACACACCTGACTCCAAGAAGGCCTTCTTGCACCTGCTGGCTGAGGTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS CAA 72 bp TTGTCCACCTCAGCCAGCAGGTGCAAGAAGGCCTTCTaGGAGTCAGGTGTGTCCCGGTATGCAGACCAGCGC +
Preference number: 6 (lower is better)
Translates to: LSTSASRCKKAF*ESGVSRYADQR
Trigger: GCGCTGGTCTGCATACCGGGACACACCTGACTCCAAGAAGGCCTTCTTGCACCTGCTGGCTGAGGTGGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS CAA 72 bp CTCCCTCCCCAGGGTGGGAACCTCAGACAGCGTTTCTaGGGCCTGTTCAGGGCTTTGTCTTGTGCTGATGGC +
Preference number: 6 (lower is better)
Translates to: LPPQGGNLRQRF*GLFRALSCADG
Trigger: GCCATCAGCACAAGACAAAGCCCTGAACAGGCCCAAGAAACGCTGTCTGAGGTTCCCACCCTGGGGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531385.1
CDS CAA 90 bp GCAATCCCACTGGGCACATCCTCATCCGTCTGGAAAGTGACCTCCTaGCCCTCTTTGCGCCCCTCAGGGTTAGTGAGGACAAGCCTCACG +
Preference number: 6 (lower is better)
Translates to: AIPLGTSSSVWKVTS*PSLRPSGLVRTSLT
Trigger: CGTGAGGCTTGTCCTCACTAACCCTGAGGGGCGCAAAGAGGGCAAGGAGGTCACTTTCCAGACGGATGAGGATGTGCCCAGTGGGATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CAA 90 bp CAGGGTGGGAACCTCAGACAGCGTTTCTTGGGCCTGTTCAGGGCTTaGTCTTGTGCTGATGGCATCAAGGGACACCCCACCCGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: QGGNLRQRFLGLFRA*SCADGIKGHPTRRQ
Trigger: CTGCCTTCGGGTGGGGTGTCCCTTGATGCCATCAGCACAAGACAAAGCCCTGAACAGGCCCAAGAAACGCTGTCTGAGGTTCCCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531385.1
CDS TCA 72 bp CAGCACGGTGATGGTGTTCTCAGACTCGCCCAGGGGTaGCGGCATGTCGGCATAATCAAAGCTGGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: QHGDGVLRLAQG*RHVGIIKAGSR
Trigger: TCTGCTCCCAGCTTTGATTATGCCGACATGCCGTCACCCCTGGGCGAGTCTGAGAACACCATCACCGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp CTGGGTGCAGGTTGGAGAAGACATGGTAGGTCTCATTaGGGAGCTTGGAGATGGTACGTCGTGGGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: LGAGWRRHGRSH*GAWRWYVVGLA
Trigger: TGCCAGGCCCACGACGTACCATCTCCAAGCTCCGCAATGAGACCTACCATGTCTTCTCCAACCTGCACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp GCAATTCAGCCGGGTCTCCCCCTTCAGGTGGCTTGCTaGCTGGAAGTAGATGAGATAGGCCTTCCTAGGCTC +
Preference number: 6 (lower is better)
Translates to: AIQPGLPLQVAC*LEVDEIGLPRL
Trigger: GAGCCTAGGAAGGCCTATCTCATCTACTTCCAGGCAGCAAGCCACCTGAAGGGGGAGACCCGGCTGAATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp TGCTTTCCTTGCAGGCAGCTTTCCTGGCAATGCGGATaGAATTCAGCCGGGTCTCCCCCTTCAGGTGGCTTG +
Preference number: 6 (lower is better)
Translates to: CFPCRQLSWQCG*NSAGSPPSGGL
Trigger: CAAGCCACCTGAAGGGGGAGACCCGGCTGAATTGCATCCGCATTGCCAGGAAAGCTGCCTGCAAGGAAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp TTCTCGCTCAGGCTCTGGAAGATGACATGGGCTCGCTaGCCTGGGGCATGCTGGGAAGTGTTGACCATCAAG +
Preference number: 6 (lower is better)
Translates to: FSLRLWKMTWAR*PGACWEVLTIK
Trigger: CTTGATGGTCAACACTTCCCAGCATGCCCCAGGCCAGCGAGCCCATGTCATCTTCCAGAGCCTGAGCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp AACTGCACACAGTGGGTATCATTCTCGCTCAGGCTCTaGAAGATGACATGGGCTCGCTGGCCTGGGGCATGC +
Preference number: 6 (lower is better)
Translates to: NCTQWVSFSLRL*KMTWARWPGAC
Trigger: GCATGCCCCAGGCCAGCGAGCCCATGTCATCTTCCAGAGCCTGAGCGAGAATGATACCCACTGTGTGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp GGGCTCCTCCCACTTGAGGAAGATCATGTCCTCCAGTaGAGTGAAGGTCAGGGACTCGGCTGCAATCCCACT +
Preference number: 6 (lower is better)
Translates to: GLLPLEEDHVLQ*SEGQGLGCNPT
Trigger: AGTGGGATTGCAGCCGAGTCCCTGACCTTCACTCCACTGGAGGACATGATCTTCCTCAAGTGGGAGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp AGAAGACATGGTAGGTCTCATTGCGGAGCTTGGAGATaGTACGTCGTGGGCCTGGCACGTTCACTGCCGGGT +
Preference number: 6 (lower is better)
Translates to: RRHGRSHCGAWR*YVVGLARSLPG
Trigger: ACCCGGCAGTGAACGTGCCAGGCCCACGACGTACCATCTCCAAGCTCCGCAATGAGACCTACCATGTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp GCACGGAGAACAGGTAGGTGGTGCCTGGGTGCAGGTTaGAGAAGACATGGTAGGTCTCATTGCGGAGCTTGG +
Preference number: 6 (lower is better)
Translates to: ARRTGRWCLGAG*RRHGRSHCGAW
Trigger: CCAAGCTCCGCAATGAGACCTACCATGTCTTCTCCAACCTGCACCCAGGCACCACCTACCTGTTCTCCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp AGGGTTTTGGCAGCAAAGAAAACGTCCACCAAGTTGTaGCAGCGGATCATCTCCAGGACCGTGGCGCAGGCG +
Preference number: 6 (lower is better)
Translates to: RVLAAKKTSTKL*QRIISRTVAQA
Trigger: CGCCTGCGCCACGGTCCTGGAGATGATCCGCTGCCACAACTTGGTGGACGTTTTCTTTGCTGCCAAAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS CCA 72 bp TCCCTCCCCAGGGTGGGAACCTCAGACAGCGTTTCTTaGGCCTGTTCAGGGCTTTGTCTTGTGCTGATGGCA +
Preference number: 6 (lower is better)
Translates to: SLPRVGTSDSVS*ACSGLCLVLMA
Trigger: TGCCATCAGCACAAGACAAAGCCCTGAACAGGCCCAAGAAACGCTGTCTGAGGTTCCCACCCTGGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531385.1
CDS CAA 72 bp TCCTCATCCGTCTGGAAAGTGACCTCCTTGCCCTCTTaGCGCCCCTCAGGGTTAGTGAGGACAAGCCTCACG +
Preference number: 6 (lower is better)
Translates to: SSSVWKVTSLPS*RPSGLVRTSLT
Trigger: CGTGAGGCTTGTCCTCACTAACCCTGAGGGGCGCAAAGAGGGCAAGGAGGTCACTTTCCAGACGGATGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CAA 72 bp CTGGGCACATCCTCATCCGTCTGGAAAGTGACCTCCTaGCCCTCTTTGCGCCCCTCAGGGTTAGTGAGGACA +
Preference number: 6 (lower is better)
Translates to: LGTSSSVWKVTS*PSLRPSGLVRT
Trigger: TGTCCTCACTAACCCTGAGGGGCGCAAAGAGGGCAAGGAGGTCACTTTCCAGACGGATGAGGATGTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CAA 72 bp CGGAGGGTTTTGGCAGCAAAGAAAACGTCCACCAAGTaGTGGCAGCGGATCATCTCCAGGACCGTGGCGCAG +
Preference number: 6 (lower is better)
Translates to: RRVLAAKKTSTK*WQRIISRTVAQ
Trigger: CTGCGCCACGGTCCTGGAGATGATCCGCTGCCACAACTTGGTGGACGTTTTCTTTGCTGCCAAAACCCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000465525.6
ENST00000492954.1
ENST00000493601.5
CDS GCA 72 bp CTGTCTTCACACACTCTCGGATGGTCTGGTTGTGGCTaGTGCCCAGGGTGTAGTGATAGCACAGCGACACAG +
Preference number: 6 (lower is better)
Translates to: LSSHTLGWSGCG*CPGCSDSTATQ
Trigger: CTGTGTCGCTGTGCTATCACTACACCCTGGGCAGCAGCCACAACCAGACCATCCGAGAGTGTGTGAAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000527027.1
CDS CCA 72 bp GGTTGGAGAAGACATGGTAGGTCTCATTGCGGAGCTTaGAGATGGTACGTCGTGGGCCTGGCACGTTCACTG +
Preference number: 6 (lower is better)
Translates to: GWRRHGRSHCGA*RWYVVGLARSL
Trigger: CAGTGAACGTGCCAGGCCCACGACGTACCATCTCCAAGCTCCGCAATGAGACCTACCATGTCTTCTCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS CAA 90 bp GTTCCGATAGGGCAGCAGGTTCTTGATGGTGTAGCGGCTGACACCTaGCTCTGTCTTCACACACTCTCGGATGGTCTGGTTGTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: VPIGQQVLDGVAADT*LCLHTLSDGLVVAA
Trigger: AGCAGCCACAACCAGACCATCCGAGAGTGTGTGAAGACAGAGCAAGGTGTCAGCCGCTACACCATCAAGAACCTGCTGCCCTATCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000527027.1
CDS CAA 72 bp GGGCAGCAGGTTCTTGATGGTGTAGCGGCTGACACCTaGCTCTGTCTTCACACACTCTCGGATGGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: GQQVLDGVAADT*LCLHTLSDGLV
Trigger: AACCAGACCATCCGAGAGTGTGTGAAGACAGAGCAAGGTGTCAGCCGCTACACCATCAAGAACCTGCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000527027.1
CDS CAA 72 bp AACCTCAGACAGCGTTTCTTGGGCCTGTTCAGGGCTTaGTCTTGTGCTGATGGCATCAAGGGACACCCCACC +
Preference number: 6 (lower is better)
Translates to: NLRQRFLGLFRA*SCADGIKGHPT
Trigger: GGTGGGGTGTCCCTTGATGCCATCAGCACAAGACAAAGCCCTGAACAGGCCCAAGAAACGCTGTCTGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531385.1
CDS CAA 90 bp CCAGAACTAAACAGCAAAAGTTTCCAAAGGTATGGCGAGGGGAGCTaGGGCATGAGGCTGAGCTCAAGGCAGAGGCTGGCCGAGCTTACT +
Preference number: 6 (lower is better)
Translates to: PELNSKSFQRYGEGS*GMRLSSRQRLAELT
Trigger: AGTAAGCTCGGCCAGCCTCTGCCTTGAGCTCAGCCTCATGCCCAAGCTCCCCTCGCCATACCTTTGGAAACTTTTGCTGTTTAGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465525.6
CDS GCA 72 bp TCTTCACACACTCTCGGATGGTCTGGTTGTGGCTGCTaGCCAGGGTGTAGTGATAGCACAGCGACACAGTAT +
Preference number: 6 (lower is better)
Translates to: SSHTLGWSGCGC*PGCSDSTATQY
Trigger: ATACTGTGTCGCTGTGCTATCACTACACCCTGGGCAGCAGCCACAACCAGACCATCCGAGAGTGTGTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000527027.1
CDS GCA 72 bp GAAGGCCGCACTCCGTGTGTAGCTGTCAGTCAGGGCTaGATTAATGTAGTTGTTGGAGTCCCCATCAGTGGA +
Preference number: 6 (lower is better)
Translates to: EGRTPCVAVSQG*INVVVGVPISG
Trigger: TCCACTGATGGGGACTCCAACAACTACATTAATGCAGCCCTGACTGACAGCTACACACGGAGTGCGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
ENST00000493601.5
CDS CCA 72 bp GAAGTAGATGAGATAGGCCTTCCTAGGCTCAAGTGGTaGGTTCCAGAAGCCTCGGTAGGTCTGGTTGTCACC +
Preference number: 6 (lower is better)
Translates to: EVDEIGLPRLKW*VPEASVGLVVT
Trigger: GGTGACAACCAGACCTACCGAGGCTTCTGGAACCCACCACTTGAGCCTAGGAAGGCCTATCTCATCTACTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS CCA 72 bp CTGGAAGTAGATGAGATAGGCCTTCCTAGGCTCAAGTaGTGGGTTCCAGAAGCCTCGGTAGGTCTGGTTGTC +
Preference number: 6 (lower is better)
Translates to: LEVDEIGLPRLK*WVPEASVGLVV
Trigger: GACAACCAGACCTACCGAGGCTTCTGGAACCCACCACTTGAGCCTAGGAAGGCCTATCTCATCTACTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000415600.6
ENST00000428026.6
ENST00000460170.2
CDS GCA 72 bp CACACAGTTGTAAATGTCCACGACGCCCTCACACTCTaGCATGTCCAGCATCACATCCAGGACGATATAGCA +
Preference number: 6 (lower is better)
Translates to: HTVVNVHDALTL*HVQHHIQDDIA
Trigger: TGCTATATCGTCCTGGATGTGATGCTGGACATGGCAGAGTGTGAGGGCGTCGTGGACATTTACAACTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345512.7
ENST00000373779.8
ENST00000428026.6
ENST00000460170.2
CDS TCA 72 bp CTCAGGCTTCGGCCCTTGAGTGGCTATGAAGTGGTTTaGCCTGTGGTAACCTTCTCGGTTTATCCGAATATC +
Preference number: 6 (lower is better)
Translates to: LRLRPLSGYEVV*PVVTFSVYPNI
Trigger: GATATTCGGATAAACCGAGAAGGTTACCACAGGTCAAACCACTTCATAGCCACTCAAGGGCCGAAGCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460170.2
CDS CCA 72 bp TTACTCCCTGCCTCCGCGCTTCGGCATCTGCTATTTTaGCTGCCTAGGCCAAATTTCCCAAATGTCTATATG +
Preference number: 6 (lower is better)
Translates to: LLPASALRHLLF*LPRPNFPNVYM
Trigger: CATATAGACATTTGGGAAATTTGGCCTAGGCAGCCAAAATAGCAGATGCCGAAGCGCGGAGGCAGGGAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465525.6