RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTPN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000196396

Ensembl transcript IDs: ENST00000371621.5, ENST00000541713.5

Found 315 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTACCTACCGCGGCATaGCTGCTAGTCGGGCGTGGGCTCTGCGGGCAGAGGCGGACAGTG +
Preference number: 1 (lower is better)
Translates to: GPALYAVRRPLPTAA*LLVGRGLCGQRRTV
Trigger: CACTGTCCGCCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAAGGGCCGCCGGACCGCGTAGAGAGCCGGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR CCA 90 bp GGCAGGCTGCCTAAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTaGTTTCCAGCAGGTGCCTCTCTTCCAAATCACGGTCTGCTCAAG +
Preference number: 1 (lower is better)
Translates to: GRLPKGPSPRLFQEV*FPAGASLPNHGLLK
Trigger: CTTGAGCAGACCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTTAGGCAGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR TCA 90 bp CAGAGCGTGAGGTGTGAATATGGCTTCCCATACCCTTGGAATGTCTaGGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCA +
Preference number: 1 (lower is better)
Translates to: QSVRCEYGFPYPWNV*VTARPCCTRTGWAS
Trigger: TGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCCAAGGGTATGGGAAGCCATATTCACACCTCACGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR TCA 90 bp GAGGGCCCTACACAGGCAAAGCGTCAATTTGGGAAGGAAATGGGCTaGGGCCTAAGGTGTTCAACAAGCTCACAGTCAAGGAAAGCGCTC +
Preference number: 1 (lower is better)
Translates to: EGPTQAKRQFGKEMG*GLRCSTSSQSRKAL
Trigger: GAGCGCTTTCCTTGACTGTGAGCTTGTTGAACACCTTAGGCCTCAGCCCATTTCCTTCCCAAATTGACGCTTTGCCTGTGTAGGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR GCA 90 bp GTACCAGGACAGGCTGGGCCTCACCAGGAAGTCACTAGAGTGTCATaGCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTA +
Preference number: 1 (lower is better)
Translates to: VPGQAGPHQEVTRVS*QELGKCLFLENCTL
Trigger: TAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCTAGTGACTTCCTGGTGAGGCCCAGCCTGTCCTGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR GCA 90 bp TTCAGCAACAGGCTTAGGAACCACAGCCATGTAATGATCAGGTCATaGACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAG +
Preference number: 1 (lower is better)
Translates to: FSNRLRNHSHVMIRS*TGRLDLDMGHISKQ
Trigger: CTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAGCCTGTTGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR GCA 90 bp CCTCACCAGGAAGTCACTAGAGTGTCATGCCAGGAATTAGGCAAATaGCTATTCCTGGAAAACTGCACCCTATTGCTGAGCGACAATGAC +
Preference number: 1 (lower is better)
Translates to: PHQEVTRVSCQELGK*LFLENCTLLLSDND
Trigger: GTCATTGTCGCTCAGCAATAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCTAGTGACTTCCTGGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR GCA 90 bp AGAGTGTCATGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTaGACCCTATTGCTGAGCGACAATGACTTCAGCAACAGGCTTAGG +
Preference number: 1 (lower is better)
Translates to: RVSCQELGKCLFLEN*TLLLSDNDFSNRLR
Trigger: CCTAAGCCTGTTGCTGAAGTCATTGTCGCTCAGCAATAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR CCA 90 bp TTATTGTTGCAGCTAAAATGCAAACCCATCATGAATATGGCAAGTTaGAAAACTGTACAGTCTGACAGTTCTGTGAGGTCACAGAAGACC +
Preference number: 1 (lower is better)
Translates to: LLLQLKCKPIMNMAS*KTVQSDSSVRSQKT
Trigger: GGTCTTCTGTGACCTCACAGAACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTTTAGCTGCAACAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp GGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTACCTACCGCGGCATGCCTGCTAGTCGGGCGTGGGCTCTaGGGGCAGAGGCGGACAGTG +
Preference number: 2 (lower is better)
Translates to: GPALYAVRRPLPTAACLLVGRGL*GQRRTV
Trigger: CACTGTCCGCCTCTGCCCGCAGAGCCCACGCCCGAC...TAGCAGGCATGCCGCGGTAGGTAAGGGCCGCCGGACCGCGTAGAGAGCCGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp ACAGAGACGGCGGCAGGCTGCCTAAAGGACCGTCACCCAGGCTGTTTCAAGAAGGGAGGGAGCCCTGGGTaGGGCGAGCCCCAAGACGGG +
Preference number: 2 (lower is better)
Translates to: TETAAGCLKDRHPGCFKKGGSPG*GEPQDG
Trigger: CCCGTCTTGGGGCTCGCCCCACCCAGGGCTCCCTCC...CTTCTTGAAACAGCCTGGGTGACGGTCCTTTAGGCAGCCTGCCGCCGTCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp TGGGGCAGACGCGCCTCTCTCGGCAAGGTGAACCGGGACAGAGACGGCGGCAGGCCAGAGCGTGAGGTGTaGATATGGCTTCCCATACCC +
Preference number: 2 (lower is better)
Translates to: WGRRASLGKVNRDRDGGRPEREV*IWLPIP
Trigger: GGGTATGGGAAGCCATATTCACACCTCACGCTCTGG...CCTGCCGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGGCGCGTCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp TGGGGCAGACGCGCCTCTCTCGGCAAGGTGAACCGGGACAGAGACGGCGGCAGGTCTGCGCCGCCAGCATaGTACTCTCTTTCACTCTCC +
Preference number: 2 (lower is better)
Translates to: WGRRASLGKVNRDRDGGRSAPPA*YSLSLS
Trigger: GGAGAGTGAAAGAGAGTACCATGCTGGCGGCGCAGA...CCTGCCGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGGCGCGTCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGCCTGCTAGTCGGGCGTaGGCTCTGCGGGCAGAGGCG +
Preference number: 2 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKPASRA*ALRAEA
Trigger: CGCCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGG...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp CATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTGTCGGGCGTGGGCTCTaGGGGCAGAGGCGGACAGTG +
Preference number: 2 (lower is better)
Translates to: HVMIRSCTGRLDLDMGHIVGRGL*GQRRTV
Trigger: CACTGTCCGCCTCTGCCCGCAGAGCCCACGCCCGAC...AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCATTACCTACCGCGGCATaGCTGCTAGTCGGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGALPTAA*LLVGRG
Trigger: CCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAA...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp CTCACCATAGCTCTGCAGGGTGACACCTCGAATGTTCCCACCACAGAATTTCTCGGCAGAGGCGGACAGTaGGTGGAGGTGGAGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LTIALQGDTSNVPTTEFLGRGGQ*VEVEWR
Trigger: CCTCCACTCCACCTCCACCCACTGTCCGCCTCTGCC...GAGAAATTCTGTGGTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATGGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACTCTGCGCCGCCAGCATaGTACTCTCTTTCACTCTCC +
Preference number: 2 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHSAPPA*YSLSLS
Trigger: GGAGAGTGAAAGAGAGTACCATGCTGGCGGCGCAGA...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACCTCCTTCCCAGTACTaGTCTGACGCAGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGAPPSQY*SDAAGP
Trigger: TGGGCCTGCTGCGTCAGACCAGTACTGGGAAGGAGG...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp ACAGAGACGGCGGCAGGCTGCCTAAAGGACCGTCACCCAGGCTGTTTCAAGAAGCGGGGGAGCAGTGATTaGGAACTAGATCTAGCAGAT +
Preference number: 2 (lower is better)
Translates to: TETAAGCLKDRHPGCFKKRGSSD*ELDLAD
Trigger: ATCTGCTAGATCTAGTTCTCAATCACTGCTCCCCCG...CTTCTTGAAACAGCCTGGGTGACGGTCCTTTAGGCAGCCTGCCGCCGTCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACCGGGGGAGCAGTGATTaGGAACTAGATCTAGCAGAT +
Preference number: 2 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHRGSSD*ELDLAD
Trigger: ATCTGCTAGATCTAGTTCTCAATCACTGCTCCCCCG...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACACTGCACCCTATTGCTaGGCGACAATGACTTCAGCA +
Preference number: 2 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHTAPYC*ATMTSA
Trigger: TGCTGAAGTCATTGTCGCTCAGCAATAGGGTGCAGT...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGGGAGGGAGCCCTGGGTaGGGCGAGCCCCAAGACGGG +
Preference number: 2 (lower is better)
Translates to: HRISLYWLLPRERQNVKMGGSPG*GEPQDG
Trigger: CCCGTCTTGGGGCTCGCCCCACCCAGGGCTCCCTCC...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp ACCCACCCGGTCATGCAGCCACGTATCCACACACACCTGAAAAGGTATTATACCTGTACCAGGACAGGCTaGGCCTCACCAGGAAGTCAC +
Preference number: 2 (lower is better)
Translates to: THPVMQPRIHTHLKRYYTCTRTG*ASPGSH
Trigger: GTGACTTCCTGGTGAGGCCCAGCCTGTCCTGGTACA...GGTATAATACCTTTTCAGGTGTGTGTGGATACGTGGCTGCATGACCGGGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACGGTTGGACTTGGACATaGGGCACATTAGTAAGCAGA +
Preference number: 2 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHGWTWT*GTLVSR
Trigger: TCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACC...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp GTCCCTGCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCACATGCACAGGCAGGTTaGACTTGGACATGGGGCACA +
Preference number: 2 (lower is better)
Translates to: VPASLNHVQSVRCEYGFPHAQAG*TWTWGT
Trigger: TGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG...TGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp ACCCACCCGGTCATGCAGCCACGTATCCACACACACCTGAAAAGGTATTATACCCACACGGGGGAGCAGTaGTTGAGAACTAGATCTAGC +
Preference number: 2 (lower is better)
Translates to: THPVMQPRIHTHLKRYYTHTGEQ*LRTRSS
Trigger: GCTAGATCTAGTTCTCAATCACTGCTCCCCCGTGTG...GGTATAATACCTTTTCAGGTGTGTGTGGATACGTGGCTGCATGACCGGGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp CATCTGTTTCACATCAGCAGGGATAGAAAGAAACAGGAGTTACTCATCCTGGTTGGCAGAGGCGGACAGTaGGTGGAGGTGGAGTGGAGG +
Preference number: 2 (lower is better)
Translates to: HLFHISRDRKKQELLILVGRGGQ*VEVEWR
Trigger: CCTCCACTCCACCTCCACCCACTGTCCGCCTCTGCC...AACCAGGATGAGTAACTCCTGTTTCTTTCTATCCCTGCTGATGTGAAACAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR-3UTR CCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTCCTGCTAGTCGGGCGTaGGCTCTGCGGGCAGAGGCG +
Preference number: 2 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSPASRA*ALRAEA
Trigger: CGCCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGG...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGCAGGCAGGTTGGACTTaGACATGGGGCACATTAGTA +
Preference number: 2 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKQAGWT*TWGTLV
Trigger: TACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTG...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp GTCCCTGCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATATGGAGTGGAGAGTTaGTCCCTGCAGATTCAAGGG +
Preference number: 2 (lower is better)
Translates to: VPASLNHVQSVRCEYGFPYGVES*SLQIQG
Trigger: CCCTTGAATCTGCAGGGAGCAACTCTCCACTCCATA...TGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGCAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTGTAATGATCAGGTCATaGACAGGCAGGTTGGACTTG +
Preference number: 2 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASVMIRS*TGRLDL
Trigger: CAAGTCCAACCTGCCTGTGCATGACCTGATCATTAC...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGGTAATGATCAGGTCATaGACAGGCAGGTTGGACTTG +
Preference number: 2 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKVMIRS*TGRLDL
Trigger: CAAGTCCAACCTGCCTGTGCATGACCTGATCATTAC...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTCTATTCCTGGAAAACTaGACCCTATTGCTGAGCGAC +
Preference number: 2 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASLFLEN*TLLLSD
Trigger: GTCGCTCAGCAATAGGGTGCAGTTTTCCAGGAATAG...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACCAGGAATTAGGCAAATaGCTATTCCTGGAAAACTGC +
Preference number: 2 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHQELGK*LFLENC
Trigger: GCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTG...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGGGTTGGACTTGGACATaGGGCACATTAGTAAGCAGA +
Preference number: 2 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKGWTWT*GTLVSR
Trigger: TCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACC...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp CATCTGTTTCACATCAGCAGGGATAGAAAGAAACAGGAGTTACTCATCCTGGTTTTCCCAGTACTGGTCTaGCGCAGCAGGCCCATGGCA +
Preference number: 2 (lower is better)
Translates to: HLFHISRDRKKQELLILVFPVLV*RSRPMA
Trigger: TGCCATGGGCCTGCTGCGTCAGACCAGTACTGGGAA...AACCAGGATGAGTAACTCCTGTTTCTTTCTATCCCTGCTGATGTGAAACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR-3UTR TCA 90 bp GTAAGTTTGTTAAGTTATCTGAGGGCCCTACACAGGCAAAGCGTCAATTTGGGATTGCAGGAAGAGTCGTaGGCACCATCAGGCCCCACA +
Preference number: 2 (lower is better)
Translates to: VSLLSYLRALHRQSVNLGLQEES*APSGPT
Trigger: TGTGGGGCCTGATGGTGCTCACGACTCTTCCTGCAA...TCCCAAATTGACGCTTTGCCTGTGTAGGGCCCTCAGATAACTTAACAAACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR-3UTR GCA 90 bp CACTGTTCTTCAAACAACACTGGTAAGTTTGTTAAGTTATCTGAGGGCCCTACATTACCTACCGCGGCATaGCTGCTAGTCGGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: HCSSNNTGKFVKLSEGPTLPTAA*LLVGRG
Trigger: CCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAA...TGTAGGGCCCTCAGATAACTTAACAAACTTACCAGTGTTGTTTGAAGAACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR-3UTR CCA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCAAATGGCTTGTGGATTTaGTACTCAAAGTGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGANGLWI*YSKWKG
Trigger: CCCCTTCCACTTTGAGTACCAAATCCACAAGCCATT...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp GCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATACCCTCAGGCAGGTTGGACTTaGACATGGGGCACATTAGTA +
Preference number: 2 (lower is better)
Translates to: ASLNHVQSVRCEYGFPYPQAGWT*TWGTLV
Trigger: TACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTG...AGGGTATGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTGCAAATGCCTATTCCTaGAAAACTGCACCCTATTGC +
Preference number: 2 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASANAYS*KTAPYC
Trigger: GCAATAGGGTGCAGTTTTCCAGGAATAGGCATTTGC...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR CAA 90 bp TGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTATaGCTGAGCGACAATGACTTCAGCAACAGGCTTAGGAACCACAGC +
Preference number: 2 (lower is better)
Translates to: CQELGKCLFLENCTL*LSDNDFSNRLRNHS
Trigger: GCTGTGGTTCCTAAGCCTGTTGCTGAAGTCATTGTCGCTCAGCAATAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACAAGAAGACCTTACATaGATTCTAATACACACGGGG +
Preference number: 2 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGAQEDLT*ILIHTG
Trigger: CCCCGTGTGTATTAGAATGCATGTAAGGTCTTCTTG...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTTTCCAAATCACGGTCTaGTCAAGAAGAGTGTTGACT +
Preference number: 2 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASFQITV*SRRVLT
Trigger: AGTCAACACTCTTCTTGAGCAGACCGTGATTTGGAA...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGTACCCTTGGAATGTCTaGGTTACAGCAAGACCCTGC +
Preference number: 2 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVEYPWNV*VTARPC
Trigger: GCAGGGTCTTGCTGTAACTCAGACATTCCAAGGGTA...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp TATTGGCTTAAGGCATATAGCAGAGCAGCTCGCTACCTCTCTAACATAATGTGTCATAGCTCTGCAGGGTaGCACCTCGAATGTTCCCAC +
Preference number: 2 (lower is better)
Translates to: YWLKAYSRAARYLSNIMCHSSAG*HLECSH
Trigger: GTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATG...ACACATTATGTTAGAGAGGTAGCGAGCTGCTCTGCTATATGCCTTAAGCCAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTTCACTAAATAACAACTaGTTACAACCGTCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASSLNNN*LQPSSF
Trigger: GAAGGAGGACGGTTGTAAGCAGTTGTTATTTAGTGA...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR GCA 90 bp ACCCACCCGGTCATGCAGCCACGTATCCACACACACCTGAAAAGGTATTATACCCAAGAAGACCTTACATaGATTCTAATACACACGGGG +
Preference number: 2 (lower is better)
Translates to: THPVMQPRIHTHLKRYYTQEDLT*ILIHTG
Trigger: CCCCGTGTGTATTAGAATGCATGTAAGGTCTTCTTG...GGTATAATACCTTTTCAGGTGTGTGTGGATACGTGGCTGCATGACCGGGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACATTTGGTACTCAAAGTaGAAGGGGCAAAAAGTAAAA +
Preference number: 2 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHIWYSK*KGQKVK
Trigger: TTTTACTTTTTGCCCCTTCCACTTTGAGTACCAAAT...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTCCTCCTTCCCAGTACTaGTCTGACGCAGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSPPSQY*SDAAGP
Trigger: TGGGCCTGCTGCGTCAGACCAGTACTGGGAAGGAGG...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp CATCTGTTTCACATCAGCAGGGATAGAAAGAAACAGGAGTTACTCATCCTGGTTCATGCACAGGCAGGTTaGACTTGGACATGGGGCACA +
Preference number: 2 (lower is better)
Translates to: HLFHISRDRKKQELLILVHAQAG*TWTWGT
Trigger: TGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG...AACCAGGATGAGTAACTCCTGTTTCTTTCTATCCCTGCTGATGTGAAACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR CAA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTaGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAAAGTTT +
Preference number: 2 (lower is better)
Translates to: LRNHSHVMIRSCTGR*DLDMGHISKQRSKF
Trigger: AAACTTTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp GTAAGTTTGTTAAGTTATCTGAGGGCCCTACACAGGCAAAGCGTCAATTTGGGAATCATGTCCAGAGCGTaGGGTGTGAATATGGCTTCC +
Preference number: 2 (lower is better)
Translates to: VSLLSYLRALHRQSVNLGIMSRA*GVNMAS
Trigger: GGAAGCCATATTCACACCTCACGCTCTGGACATGAT...TCCCAAATTGACGCTTTGCCTGTGTAGGGCCCTCAGATAACTTAACAAACTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR-3UTR CCA 90 bp GGCCCATGGCAAAGCCTTCCATTCCCAGTACTACCTGAGGATTTATTATTGTACCACATCCGGGGAAGATaGGTTTTAGTGCAGAACCAA +
Preference number: 2 (lower is better)
Translates to: GPWQSLPFPVLPEDLLLYHIRGR*VLVQNQ
Trigger: TTGGTTCTGCACTAAAACCCATCTTCCCCGGATGTG...GTACAATAATAAATCCTCAGGTAGTACTGGGAATGGAAGGCTTTGCCATGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR CAA 90 bp AACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTaGGACATGGGGCACATTAGTAAGCAGAGATCAAAGTTTCTCATT +
Preference number: 2 (lower is better)
Translates to: NHSHVMIRSCTGRLD*DMGHISKQRSKFLI
Trigger: AATGAGAAACTTTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGCACACGGGGGAGCAGTaGTTGAGAACTAGATCTAGC +
Preference number: 2 (lower is better)
Translates to: HRISLYWLLPRERQNVKMHTGEQ*LRTRSS
Trigger: GCTAGATCTAGTTCTCAATCACTGCTCCCCCGTGTG...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp TATTGGCTTAAGGCATATAGCAGAGCAGCTCGCTACCTCTCTAACATAATGTGTATCATGTCCAGAGCGTaGGGTGTGAATATGGCTTCC +
Preference number: 2 (lower is better)
Translates to: YWLKAYSRAARYLSNIMCIMSRA*GVNMAS
Trigger: GGAAGCCATATTCACACCTCACGCTCTGGACATGAT...ACACATTATGTTAGAGAGGTAGCGAGCTGCTCTGCTATATGCCTTAAGCCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR TCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTACTGCACCCTATTGCTaGGCGACAATGACTTCAGCA +
Preference number: 2 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSTAPYC*ATMTSA
Trigger: TGCTGAAGTCATTGTCGCTCAGCAATAGGGTGCAGT...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAAATTTGGTACTCAAAGTaGAAGGGGCAAAAAGTAAAA +
Preference number: 2 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQIWYSK*KGQKVK
Trigger: TTTTACTTTTTGCCCCTTCCACTTTGAGTACCAAAT...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CCA 90 bp CATCTGTTTCACATCAGCAGGGATAGAAAGAAACAGGAGTTACTCATCCTGGTTAATGGCTTGTGGATTTaGTACTCAAAGTGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: HLFHISRDRKKQELLILVNGLWI*YSKWKG
Trigger: CCCCTTCCACTTTGAGTACCAAATCCACAAGCCATT...AACCAGGATGAGTAACTCCTGTTTCTTTCTATCCCTGCTGATGTGAAACAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR-3UTR TCA 90 bp GTAAGTTTGTTAAGTTATCTGAGGGCCCTACACAGGCAAAGCGTCAATTTGGGAGTATCCACACACACCTaGAAAGGTATTATACCAAAA +
Preference number: 2 (lower is better)
Translates to: VSLLSYLRALHRQSVNLGVSTHT*KGIIPK
Trigger: TTTTGGTATAATACCTTTTCAGGTGTGTGTGGATAC...TCCCAAATTGACGCTTTGCCTGTGTAGGGCCCTCAGATAACTTAACAAACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR-3UTR GCA 90 bp CACTGTTCTTCAAACAACACTGGTAAGTTTGTTAAGTTATCTGAGGGCCCTACACAGGAATTAGGCAAATaGCTATTCCTGGAAAACTGC +
Preference number: 2 (lower is better)
Translates to: HCSSNNTGKFVKLSEGPTQELGK*LFLENC
Trigger: GCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTG...TGTAGGGCCCTCAGATAACTTAACAAACTTACCAGTGTTGTTTGAAGAACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR CAA 90 bp GAGATTACAACTCAAAACACTGTTCTTCAAACAACACTGGTAAGTTaGTTAAGTTATCTGAGGGCCCTACACAGGCAAAGCGTCAATTTG +
Preference number: 2 (lower is better)
Translates to: EITTQNTVLQTTLVS*LSYLRALHRQSVNL
Trigger: CAAATTGACGCTTTGCCTGTGTAGGGCCCTCAGATAACTTAACAAACTTACCAGTGTTGTTTGAAGAACAGTGTTTTGAGTTGTAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR-3UTR GCA 90 bp CATTTCAAGCACATATTTTTCATCAGGACACAAGAAGACCTTACATGCATTCTATCACTAAATAACAACTaGTTACAACCGTCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: HFKHIFFIRTQEDLTCILSLNNN*LQPSSF
Trigger: GAAGGAGGACGGTTGTAAGCAGTTGTTATTTAGTGA...TAGAATGCATGTAAGGTCTTCTTGTGTCCTGATGAAAAATATGTGCTTGAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR GCA 72 bp CTCTACGCGGTCCGGCGGCCCTTACCTACCGCGGCATaGCTGCTAGTCGGGCGTGGGCTCTGCGGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: LYAVRRPLPTAA*LLVGRGLCGQR
Trigger: CCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAAGGGCCGCCGGACCGCGTAGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR TCA 72 bp AACTGCTTACAACCGTCCTCCTTCCCAGTACTGGTCTaGCGCAGCAGGCCCATGGCAAAGCCTTCCATTCCC +
Preference number: 3 (lower is better)
Translates to: NCLQPSSFPVLV*RSRPMAKPSIP
Trigger: GGGAATGGAAGGCTTTGCCATGGGCCTGCTGCGTCAGACCAGTACTGGGAAGGAGGACGGTTGTAAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR CCA 72 bp ATAACAACTGCTTACAACCGTCCTCCTTCCCAGTACTaGTCTGACGCAGCAGGCCCATGGCAAAGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: ITTAYNRPPSQY*SDAAGPWQSLP
Trigger: TGGAAGGCTTTGCCATGGGCCTGCTGCGTCAGACCAGTACTGGGAAGGAGGACGGTTGTAAGCAGTTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CAA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGCAGGCCCCACAGGGTTaGAGGGTGGGGCAGACGCGC +
Preference number: 3 (lower is better)
Translates to: HRISLYWLLPRERQNVKMQAPQG*RVGQTR
Trigger: GCGCGTCTGCCCCACCCTCAAACCCTGTGGGGCCTG...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR TCA 72 bp CTCTCTTCCAAATCACGGTCTGCTCAAGAAGAGTGTTaGCTTGGAATGGCGGAGGCTGATCCCAAAGGTGGG +
Preference number: 3 (lower is better)
Translates to: LSSKSRSAQEEC*LGMAEADPKGG
Trigger: CCCACCTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTGATTTGGAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR TCA 72 bp TTCAACAAGCTCACAGTCAAGGAAAGCGCTCCAGCCTaGGGGTGCTGGCAATGCAGGGATGCTGAGGTTAAT +
Preference number: 3 (lower is better)
Translates to: FNKLTVKESAPA*GCWQCRDAEVN
Trigger: ATTAACCTCAGCATCCCTGCATTGCCAGCACCCTCAGGCTGGAGCGCTTTCCTTGACTGTGAGCTTGTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR-3UTR CAA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGATATGGAGTGGAGAGTaGCTCCCTGCAGATTCAAGG +
Preference number: 3 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKIWSGE*LPADSR
Trigger: CCTTGAATCTGCAGGGAGCAACTCTCCACTCCATAT...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CAA 90 bp ACCCACCCGGTCATGCAGCCACGTATCCACACACACCTGAAAAGGTATTATACCTGCTCAAGAAGAGTGTaGACTTGGAATGGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: THPVMQPRIHTHLKRYYTCSRRV*TWNGGG
Trigger: GCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCA...GGTATAATACCTTTTCAGGTGTGTGTGGATACGTGGCTGCATGACCGGGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR GCA 72 bp AGGCTTAGGAACCACAGCCATGTAATGATCAGGTCATaGACAGGCAGGTTGGACTTGGACATGGGGCACATT +
Preference number: 3 (lower is better)
Translates to: RLRNHSHVMIRS*TGRLDLDMGHI
Trigger: AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR GCA 72 bp CAGGCTGGGCCTCACCAGGAAGTCACTAGAGTGTCATaGCAGGAATTAGGCAAATGCCTATTCCTGGAAAAC +
Preference number: 3 (lower is better)
Translates to: QAGPHQEVTRVS*QELGKCLFLEN
Trigger: GTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCTAGTGACTTCCTGGTGAGGCCCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR GCA 72 bp ACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTaGCTCTCTTCCAAATCACGGTCTGCTCAAGAAGAG +
Preference number: 3 (lower is better)
Translates to: TQAVSRSVVSSR*LSSKSRSAQEE
Trigger: CTCTTCTTGAGCAGACCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR TCA 72 bp CCCTGCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTaGATATGGCTTCCCATACCCTTGGAATGTCTGAGT +
Preference number: 3 (lower is better)
Translates to: PCFPKSCPEREV*IWLPIPLECLS
Trigger: ACTCAGACATTCCAAGGGTATGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CAA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGACAGGCAGGTTGGACTaGGACATGGGGCACATTAGT +
Preference number: 3 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVETGRLD*DMGHIS
Trigger: ACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGT...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR TCA 72 bp GCAAATGCCTATTCCTGGAAAACTGCACCCTATTGCTaGGCGACAATGACTTCAGCAACAGGCTTAGGAACC +
Preference number: 3 (lower is better)
Translates to: ANAYSWKTAPYC*ATMTSATGLGT
Trigger: GGTTCCTAAGCCTGTTGCTGAAGTCATTGTCGCTCAGCAATAGGGTGCAGTTTTCCAGGAATAGGCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CAA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGAAATGGCTTGTGGATTaGGTACTCAAAGTGGAAGGG +
Preference number: 3 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLKWLVD*VLKVEG
Trigger: CCCTTCCACTTTGAGTACCAAATCCACAAGCCATTT...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CAA 90 bp CATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAAATGGCTTGTGGATTaGGTACTCAAAGTGGAAGGG +
Preference number: 3 (lower is better)
Translates to: HVMIRSCTGRLDLDMGHIKWLVD*VLKVEG
Trigger: CCCTTCCACTTTGAGTACCAAATCCACAAGCCATTT...AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CAA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGATATGGAGTGGAGAGTaGCTCCCTGCAGATTCAAGG +
Preference number: 3 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVEIWSGE*LPADSR
Trigger: CCTTGAATCTGCAGGGAGCAACTCTCCACTCCATAT...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR GCA 72 bp TGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTaGACCCTATTGCTGAGCGACAATGACTTCAGCAAC +
Preference number: 3 (lower is better)
Translates to: CQELGKCLFLEN*TLLLSDNDFSN
Trigger: GTTGCTGAAGTCATTGTCGCTCAGCAATAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR GCA 72 bp GAAGTCACTAGAGTGTCATGCCAGGAATTAGGCAAATaGCTATTCCTGGAAAACTGCACCCTATTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: EVTRVSCQELGK*LFLENCTLLLS
Trigger: GCTCAGCAATAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCTAGTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR-3UTR CAA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGAAGAAGAGTGTTGACTaGGAATGGCGGAGGCTGATC +
Preference number: 3 (lower is better)
Translates to: HRISLYWLLPRERQNVKMKKSVD*EWRRLI
Trigger: GATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTT...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR TCA 72 bp CATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTaGCAGTTCTGTGAGGTCACAGAAGACCCTGAGACA +
Preference number: 3 (lower is better)
Translates to: HHEYGKLENCTV*QFCEVTEDPET
Trigger: TGTCTCAGGGTCTTCTGTGACCTCACAGAACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR TCA 72 bp AGGCCCATGGCAAAGCCTTCCATTCCCAGTACTACCTaGGGATTTATTATTGTACTTTTTGATAAAGCCCTT +
Preference number: 3 (lower is better)
Translates to: RPMAKPSIPSTT*GFIIVLFDKAL
Trigger: AAGGGCTTTATCAAAAAGTACAATAATAAATCCTCAGGTAGTACTGGGAATGGAAGGCTTTGCCATGGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp TTTAGTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGGGCCAGGGCGGCTGCTaGGCCTCCTTCTCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: FSAEPTSVRGPALYAVRRGQGGC*ASFSAH
Trigger: GTGGGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCC...CCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCACTAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTACCTACCGCGGCATGCCTGCTAACCACAACGGGCCCGTaGTCCGGGCTGAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: GPALYAVRRPLPTAACLLTTTGP*SGLSDP
Trigger: AGGGTCACTCAGCCCGGAGCACGGGCCCGTTGTGGT...TAGCAGGCATGCCGCGGTAGGTAAGGGCCGCCGGACCGCGTAGAGAGCCGGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp TTTAGTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGGTCGGGCGTGGGCTCTaGGGGCAGAGGCGGACAGTG +
Preference number: 4 (lower is better)
Translates to: FSAEPTSVRGPALYAVRRVGRGL*GQRRTV
Trigger: CACTGTCCGCCTCTGCCCGCAGAGCCCACGCCCGAC...CCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCACTAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp TGGGGCAGACGCGCCTCTCTCGGCAAGGTGAACCGGGACAGAGACGGCGGCAGGGCTCCAGGATTCGTTTaGGTGGCCGGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WGRRASLGKVNRDRDGGRAPGFV*VAGEVG
Trigger: CCCCACCTCCCCGGCCACCCAAACGAATCCTGGAGC...CCTGCCGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGGCGCGTCTGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp TTTAGTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGGTCCTTCTCGGGCAGTaGCGGCTCCCCTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FSAEPTSVRGPALYAVRRVLLGQ*RLPFGW
Trigger: CCAGCCAAAGGGGAGCCGTCACTGCCCGAGAAGGAC...CCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCACTAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTTCCAGACCTGCCGATaGCTGCACTGCAGTGCACCA +
Preference number: 4 (lower is better)
Translates to: VQNQRPSGARLSTRSGGPFQTCR*LHCSAP
Trigger: TGGTGCACTGCAGTGCAGGCATCGGCAGGTCTGGAA...AGGGCCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp TGGGGCAGACGCGCCTCTCTCGGCAAGGTGAACCGGGACAGAGACGGCGGCAGGTTACCTACCGCGGCATaGCTGCTAGTCGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: WGRRASLGKVNRDRDGGRLPTAA*LLVGRG
Trigger: CCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAA...CCTGCCGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGGCGCGTCTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTACCTACCGCGGCATGCCTGCTACCACCCACCCGGTCATaGAGCCACGTATCCACACAC +
Preference number: 4 (lower is better)
Translates to: GPALYAVRRPLPTAACLLPPTRS*SHVSTH
Trigger: GTGTGTGGATACGTGGCTGCATGACCGGGTGGGTGG...TAGCAGGCATGCCGCGGTAGGTAAGGGCCGCCGGACCGCGTAGAGAGCCGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp GGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTACCTACCGCGGCATGCCTGCTATTGCAGGAAGAGTCGTaGGCACCATCAGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: GPALYAVRRPLPTAACLLLQEES*APSGPT
Trigger: TGTGGGGCCTGATGGTGCTCACGACTCTTCCTGCAA...TAGCAGGCATGCCGCGGTAGGTAAGGGCCGCCGGACCGCGTAGAGAGCCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp TGGGGCAGACGCGCCTCTCTCGGCAAGGTGAACCGGGACAGAGACGGCGGCAGGCCACCCACCCGGTCATaGAGCCACGTATCCACACAC +
Preference number: 4 (lower is better)
Translates to: WGRRASLGKVNRDRDGGRPPTRS*SHVSTH
Trigger: GTGTGTGGATACGTGGCTGCATGACCGGGTGGGTGG...CCTGCCGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGGCGCGTCTGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGCCCTCTTCCAGTAACTCAGTaGATGGTCCTCGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VQNQRPSGARLSTRSGGPLPVTQ*MVLVLL
Trigger: GAGAAGGACGAGGACCATGCACTGAGTTACTGGAAG...AGGGCCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp TTACCTACCGCGGCATGCCTGCTAGTCGGGCGTGGGCTCTGCGGGCAGAGGCGGAGGTGGAGAGCCAGCTaGTCTCCAAGGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LPTAACLLVGRGLCGQRRRWRAS*SPRIGG
Trigger: ACCTCCTATCCTTGGAGAGCAGCTGGCTCTCCACCT...CCGCCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp TGGGGCAGACGCGCCTCTCTCGGCAAGGTGAACCGGGACAGAGACGGCGGCAGGCATGCACAGGCAGGTTaGACTTGGACATGGGGCACA +
Preference number: 4 (lower is better)
Translates to: WGRRASLGKVNRDRDGGRHAQAG*TWTWGT
Trigger: TGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG...CCTGCCGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGGCGCGTCTGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp TTTAGTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGTGGTCAACTGGTAAATaGCCGCCCAGCTCCCGGACT +
Preference number: 4 (lower is better)
Translates to: FSAEPTSVRGPALYAVRRWSTGK*PPSSRT
Trigger: AGTCCGGGAGCTGGGCGGCCATTTACCAGTTGACCA...CCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCACTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541713.5
CDS-3UTR TCA 90 bp GTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGCCCTACCATCTCCCAAAAGTaGCCGCATGTGTTAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VQNQRPSGARLSTRSGGPTISQK*PHVLGK
Trigger: TTTGCCTAACACATGCGGTCACTTTTGGGAGATGGT...AGGGCCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp GGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTACCTACCGCGGCATGCCTGCTACGGGGGAGCAGTGATTaGGAACTAGATCTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GPALYAVRRPLPTAACLLRGSSD*ELDLAD
Trigger: ATCTGCTAGATCTAGTTCTCAATCACTGCTCCCCCG...TAGCAGGCATGCCGCGGTAGGTAAGGGCCGCCGGACCGCGTAGAGAGCCGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp AAGACGGGTGTAGGCCCCTTCCCTCTGCGCCGCCAGCATGGTACTCTCTTTCACGGCAGAGGCGGACAGTaGGTGGAGGTGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: KTGVGPFPLRRQHGTLFHGRGGQ*VEVEWR
Trigger: CCTCCACTCCACCTCCACCCACTGTCCGCCTCTGCC...GTGAAAGAGAGTACCATGCTGGCGGCGCAGAGGGAAGGGGCCTACACCCGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGCCCTCTGTTTCAAGAAGTGTaGTTTCCAGCAGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: VQNQRPSGARLSTRSGGPLFQEV*FPAGAS
Trigger: AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAG...AGGGCCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp TGGGGCAGACGCGCCTCTCTCGGCAAGGTGAACCGGGACAGAGACGGCGGCAGGACTGCACCCTATTGCTaGGCGACAATGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: WGRRASLGKVNRDRDGGRTAPYC*ATMTSA
Trigger: TGCTGAAGTCATTGTCGCTCAGCAATAGGGTGCAGT...CCTGCCGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGGCGCGTCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp AAGACGGGTGTAGGCCCCTTCCCTCTGCGCCGCCAGCATGGTACTCTCTTTCACGAAAGCGCTCCAGCCTaGGGGTGCTGGCAATGCAGG +
Preference number: 4 (lower is better)
Translates to: KTGVGPFPLRRQHGTLFHESAPA*GCWQCR
Trigger: CCTGCATTGCCAGCACCCTCAGGCTGGAGCGCTTTC...GTGAAAGAGAGTACCATGCTGGCGGCGCAGAGGGAAGGGGCCTACACCCGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR GCA 90 bp ACAGAGACGGCGGCAGGCTGCCTAAAGGACCGTCACCCAGGCTGTTTCAAGAAGTCCTTCTCGGCCCACTaGGCCGTCTGCCGCTCTAGG +
Preference number: 4 (lower is better)
Translates to: TETAAGCLKDRHPGCFKKSFSAH*AVCRSR
Trigger: CCTAGAGCGGCAGACGGCGCAGTGGGCCGAGAAGGA...CTTCTTGAAACAGCCTGGGTGACGGTCCTTTAGGCAGCCTGCCGCCGTCTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCAGGCCAGGGCGGCTGCTaGGCCTCCTTCTCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGAGQGGC*ASFSAH
Trigger: GTGGGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCC...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp TGGGGCAGACGCGCCTCTCTCGGCAAGGTGAACCGGGACAGAGACGGCGGCAGGTATGGAGTGGAGAGTTaGTCCCTGCAGATTCAAGGG +
Preference number: 4 (lower is better)
Translates to: WGRRASLGKVNRDRDGGRYGVES*SLQIQG
Trigger: CCCTTGAATCTGCAGGGAGCAACTCTCCACTCCATA...CCTGCCGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGGCGCGTCTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTACATGGGAAGTCACTaGCTTCATGTCGGATATCCT +
Preference number: 4 (lower is better)
Translates to: VQNQRPSGARLSTRSGGPYMGSH*LHVGYP
Trigger: AGGATATCCGACATGAAGCCAGTGACTTCCCATGTA...AGGGCCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR GCA 90 bp ACCCACCCGGTCATGCAGCCACGTATCCACACACACCTGAAAAGGTATTATACCACGGGCCAGGGCGGCTaGTGCGCCTCCTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: THPVMQPRIHTHLKRYYTTGQGG*CASFSA
Trigger: GGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCCCGT...GGTATAATACCTTTTCAGGTGTGTGTGGATACGTGGCTGCATGACCGGGTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp TTACCTACCGCGGCATGCCTGCTAGTCGGGCGTGGGCTCTGCGGGCAGAGGCGGTTGGGAAGAACTCCCTaGATTTCCCATTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LPTAACLLVGRGLCGQRRLGRTP*ISHCVA
Trigger: AGCCACACAATGGGAAATGCAGGGAGTTCTTCCCAA...CCGCCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp AAGACGGGTGTAGGCCCCTTCCCTCTGCGCCGCCAGCATGGTACTCTCTTTCACCGCCGCCCTAGCCGCTaGTGCTTCTTCATGTCAACC +
Preference number: 4 (lower is better)
Translates to: KTGVGPFPLRRQHGTLFHRRPSR*CFFMST
Trigger: GGTTGACATGAAGAAGCAGCAGCGGCTAGGGCGGCG...GTGAAAGAGAGTACCATGCTGGCGGCGCAGAGGGAAGGGGCCTACACCCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541713.5
CDS-3UTR CCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTCCTGCTAGTCGGGCGTaGGCTCTGCGGGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASPASRA*ALRAEA
Trigger: CGCCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGG...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp TTACCTACCGCGGCATGCCTGCTAGTCGGGCGTGGGCTCTGCGGGCAGAGGCGGCACATCCGGGGAAGATaGGTTTTAGTGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: LPTAACLLVGRGLCGQRRHIRGR*VLVQNQ
Trigger: TTGGTTCTGCACTAAAACCCATCTTCCCCGGATGTG...CCGCCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GTCCCTGCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCAGGAGGGAGCCCTGGGTaGGGCGAGCCCCAAGACGGG +
Preference number: 4 (lower is better)
Translates to: VPASLNHVQSVRCEYGFPGGSPG*GEPQDG
Trigger: CCCGTCTTGGGGCTCGCCCCACCCAGGGCTCCCTCC...TGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGCCCTAGAATTTCTCTGTACTaGCTTCTACCACGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VQNQRPSGARLSTRSGGPRISLY*LLPRER
Trigger: CCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCT...AGGGCCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAAACGGGCCAGGGCGGCTaGTGCGCCTCCTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQTGQGG*CASFSA
Trigger: GGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCCCGT...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTCACTAAATAACAACTaGTTACAACCGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VQNQRPSGARLSTRSGGPSLNNN*LQPSSF
Trigger: GAAGGAGGACGGTTGTAAGCAGTTGTTATTTAGTGA...AGGGCCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGGAGGGAGCCCTGGGTaGGGCGAGCCCCAAGACGGG +
Preference number: 4 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLGGSPG*GEPQDG
Trigger: CCCGTCTTGGGGCTCGCCCCACCCAGGGCTCCCTCC...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp TGTGGTTTCCAGCAGGTGCCTCTCTTCCAAATCACGGTCTGCTCAAGAAGAGTGGCAATCCCCGACCCCTaGAGCTACCGCCGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: CGFQQVPLFQITVCSRRVAIPDP*SYRRPS
Trigger: GCTAGGGCGGCGGTAGCTGCAGGGGTCGGGGATTGC...CACTCTTCTTGAGCAGACCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GTCCCTGCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCAGCAATCCCCGACCCCTaGAGCTACCGCCGCCCTAGC +
Preference number: 4 (lower is better)
Translates to: VPASLNHVQSVRCEYGFPAIPDP*SYRRPS
Trigger: GCTAGGGCGGCGGTAGCTGCAGGGGTCGGGGATTGC...TGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp ACAGAGACGGCGGCAGGCTGCCTAAAGGACCGTCACCCAGGCTGTTTCAAGAAGAGCTGGTCGGCTGTCTaGATCAGCCCCATCCGAAAC +
Preference number: 4 (lower is better)
Translates to: TETAAGCLKDRHPGCFKKSWSAV*ISPIRN
Trigger: GTTTCGGATGGGGCTGATCCAGACAGCCGACCAGCT...CTTCTTGAAACAGCCTGGGTGACGGTCCTTTAGGCAGCCTGCCGCCGTCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCAGGGGATATGCTCGGGTaGGGGCTCCAGGTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGAGDMLG*GLQVLV
Trigger: CACGAGGACCTGGAGCCCCCACCCGAGCATATCCCC...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCAGCTCCAGGATTCGTTTaGGTGGCCGGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGAAPGFV*VAGEVG
Trigger: CCCCACCTCCCCGGCCACCCAAACGAATCCTGGAGC...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATACCCTCCTGCTAGTCGGGCGTaGGCTCTGCGGGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: ASLNHVQSVRCEYGFPYPPASRA*ALRAEA
Trigger: CGCCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGG...AGGGTATGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp AAGACGGGTGTAGGCCCCTTCCCTCTGCGCCGCCAGCATGGTACTCTCTTTCACTCTGCGCCGCCAGCATaGTACTCTCTTTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: KTGVGPFPLRRQHGTLFHSAPPA*YSLSLS
Trigger: GGAGAGTGAAAGAGAGTACCATGCTGGCGGCGCAGA...GTGAAAGAGAGTACCATGCTGGCGGCGCAGAGGGAAGGGGCCTACACCCGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp ACAGAGACGGCGGCAGGCTGCCTAAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTACCAGGACAGGCTaGGCCTCACCAGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: TETAAGCLKDRHPGCFKKCTRTG*ASPGSH
Trigger: GTGACTTCCTGGTGAGGCCCAGCCTGTCCTGGTACA...CTTCTTGAAACAGCCTGGGTGACGGTCCTTTAGGCAGCCTGCCGCCGTCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGGCCCACTGCGCCGTCTaGCGCTCTAGGCCGCGTCGC +
Preference number: 4 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVEAHCAV*RSRPRR
Trigger: GCGACGCGGCCTAGAGCGGCAGACGGCGCAGTGGGC...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp TGTGGTTTCCAGCAGGTGCCTCTCTTCCAAATCACGGTCTGCTCAAGAAGAGTGGGGGATATGCTCGGGTaGGGGCTCCAGGTCCTCGTG +
Preference number: 4 (lower is better)
Translates to: CGFQQVPLFQITVCSRRVGDMLG*GLQVLV
Trigger: CACGAGGACCTGGAGCCCCCACCCGAGCATATCCCC...CACTCTTCTTGAGCAGACCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGCCCTATTTGGTACTCAAAGTaGAAGGGGCAAAAAGTAAAA +
Preference number: 4 (lower is better)
Translates to: VQNQRPSGARLSTRSGGPIWYSK*KGQKVK
Trigger: TTTTACTTTTTGCCCCTTCCACTTTGAGTACCAAAT...AGGGCCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp AAGACGGGTGTAGGCCCCTTCCCTCTGCGCCGCCAGCATGGTACTCTCTTTCACCGGGGGAGCAGTGATTaGGAACTAGATCTAGCAGAT +
Preference number: 4 (lower is better)
Translates to: KTGVGPFPLRRQHGTLFHRGSSD*ELDLAD
Trigger: ATCTGCTAGATCTAGTTCTCAATCACTGCTCCCCCG...GTGAAAGAGAGTACCATGCTGGCGGCGCAGAGGGAAGGGGCCTACACCCGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAACCTCTCTCGGCAAGGTaGACCGGGACAGAGACGGCG +
Preference number: 4 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQPLSAR*TGTETA
Trigger: CGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGG...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGCCTCTCTCGGCAAGGTaGACCGGGACAGAGACGGCG +
Preference number: 4 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLPLSAR*TGTETA
Trigger: CGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGG...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GTAAGTTTGTTAAGTTATCTGAGGGCCCTACACAGGCAAAGCGTCAATTTGGGAGCCCACTGCGCCGTCTaGCGCTCTAGGCCGCGTCGC +
Preference number: 4 (lower is better)
Translates to: VSLLSYLRALHRQSVNLGAHCAV*RSRPRR
Trigger: GCGACGCGGCCTAGAGCGGCAGACGGCGCAGTGGGC...TCCCAAATTGACGCTTTGCCTGTGTAGGGCCCTCAGATAACTTAACAAACTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR GCA 90 bp GCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATACCCTACCACAACGGGCCCGTaGTCCGGGCTGAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: ASLNHVQSVRCEYGFPYPTTTGP*SGLSDP
Trigger: AGGGTCACTCAGCCCGGAGCACGGGCCCGTTGTGGT...AGGGTATGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACAGGTGGAGAGCCAGCTaGTCTCCAAGGATAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHRWRAS*SPRIGG
Trigger: ACCTCCTATCCTTGGAGAGCAGCTGGCTCTCCACCT...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp AAGACGGGTGTAGGCCCCTTCCCTCTGCGCCGCCAGCATGGTACTCTCTTTCACCAGTCTTTATCCTCCTaGGTCTCTTCCTTCACCCAC +
Preference number: 4 (lower is better)
Translates to: KTGVGPFPLRRQHGTLFHQSLSS*VSSFTH
Trigger: GTGGGTGAAGGAAGAGACCCAGGAGGATAAAGACTG...GTGAAAGAGAGTACCATGCTGGCGGCGCAGAGGGAAGGGGCCTACACCCGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATACCCTGCTGGGGAGGCAGCCTaGGCACCTCGAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: ASLNHVQSVRCEYGFPYPAGEAA*APRRLP
Trigger: GGGAAGTCTTCGAGGTGCCCAGGCTGCCTCCCCAGC...AGGGTATGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACGTGGTTTCCAGCAGGTaGCTCTCTTCCAAATCACGG +
Preference number: 4 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHVVSSR*LSSKSR
Trigger: CCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCAC...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CTCACCATAGCTCTGCAGGGTGACACCTCGAATGTTCCCACCACAGAATTTCTCCGCCCTAGCCGCTGCTaGTTCTTCATGTCAACCGGC +
Preference number: 4 (lower is better)
Translates to: LTIALQGDTSNVPTTEFLRPSRC*FFMSTG
Trigger: GCCGGTTGACATGAAGAAGCAGCAGCGGCTAGGGCG...GAGAAATTCTGTGGTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541713.5
CDS-3UTR TCA 90 bp CATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTTTCCCAGTACTGGTCTaGCGCAGCAGGCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: HVMIRSCTGRLDLDMGHIFPVLV*RSRPMA
Trigger: TGCCATGGGCCTGCTGCGTCAGACCAGTACTGGGAA...AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACCAGAGCGTGAGGTGTaGATATGGCTTCCCATACCC +
Preference number: 4 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGAPEREV*IWLPIP
Trigger: GGGTATGGGAAGCCATATTCACACCTCACGCTCTGG...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACCCGGACTTGTCGATCTaGTCGAACTCCTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHPDLSI*SNSFSI
Trigger: GATGGAAAAGGAGTTCGAGCAGATCGACAAGTCCGG...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp ACCCACCCGGTCATGCAGCCACGTATCCACACACACCTGAAAAGGTATTATACCAGACCTGCCGATGCCTaGACTGCAGTGCACCACAAC +
Preference number: 4 (lower is better)
Translates to: THPVMQPRIHTHLKRYYTRPADA*TAVHHN
Trigger: GTTGTGGTGCACTGCAGTGCAGGCATCGGCAGGTCT...GGTATAATACCTTTTCAGGTGTGTGTGGATACGTGGCTGCATGACCGGGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACCAGTCTTTATCCTCCTaGGTCTCTTCCTTCACCCAC +
Preference number: 4 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHQSLSS*VSSFTH
Trigger: GTGGGTGAAGGAAGAGACCCAGGAGGATAAAGACTG...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGGCTGGGGAGGCAGCCTaGGCACCTCGAAGACTTCCC +
Preference number: 4 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVEAGEAA*APRRLP
Trigger: GGGAAGTCTTCGAGGTGCCCAGGCTGCCTCCCCAGC...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp TTTAGTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGATTTGGTACTCAAAGTaGAAGGGGCAAAAAGTAAAA +
Preference number: 4 (lower is better)
Translates to: FSAEPTSVRGPALYAVRRIWYSK*KGQKVK
Trigger: TTTTACTTTTTGCCCCTTCCACTTTGAGTACCAAAT...CCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCACTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CTCACCATAGCTCTGCAGGGTGACACCTCGAATGTTCCCACCACAGAATTTCTCTGTACCAGGACAGGCTaGGCCTCACCAGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LTIALQGDTSNVPTTEFLCTRTG*ASPGSH
Trigger: GTGACTTCCTGGTGAGGCCCAGCCTGTCCTGGTACA...GAGAAATTCTGTGGTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTTCCTTCACCCACTGGTaGTTTGGGAAGAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASSFTHW*FGKNSL
Trigger: CAGGGAGTTCTTCCCAAATCACCAGTGGGTGAAGGA...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAATTGCAGGAAGAGTCGTaGGCACCATCAGGCCCCACA +
Preference number: 4 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQLQEES*APSGPT
Trigger: TGTGGGGCCTGATGGTGCTCACGACTCTTCCTGCAA...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CTCACCATAGCTCTGCAGGGTGACACCTCGAATGTTCCCACCACAGAATTTCTCCATAGCTCTGCAGGGTaGCACCTCGAATGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LTIALQGDTSNVPTTEFLHSSAG*HLECSH
Trigger: GTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATG...GAGAAATTCTGTGGTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGAGACCTGCCGATGCCTaGACTGCAGTGCACCACAAC +
Preference number: 4 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLRPADA*TAVHHN
Trigger: GTTGTGGTGCACTGCAGTGCAGGCATCGGCAGGTCT...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGGTGGTTTCCAGCAGGTaGCTCTCTTCCAAATCACGG +
Preference number: 4 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKVVSSR*LSSKSR
Trigger: CCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCAC...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACCACCCACTGGTGATTTaGGAAGAACTCCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHHPLVI*EELPAF
Trigger: AAATGCAGGGAGTTCTTCCCAAATCACCAGTGGGTG...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAAGAAAGCTCCTTCCACTaGTCCTGCACGGAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQESSFH*SCTEES
Trigger: GGACTCTTCCGTGCAGGATCAGTGGAAGGAGCTTTC...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTACTGCACCCTATTGCTaGGCGACAATGACTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASTAPYC*ATMTSA
Trigger: TGCTGAAGTCATTGTCGCTCAGCAATAGGGTGCAGT...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGTACCCTTGGAATGTCTaGGTTACAGCAAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKYPWNV*VTARPC
Trigger: GCAGGGTCTTGCTGTAACTCAGACATTCCAAGGGTA...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTCCGGACTTGTCGATCTaGTCGAACTCCTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASPDLSI*SNSFSI
Trigger: GATGGAAAAGGAGTTCGAGCAGATCGACAAGTCCGG...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTGACTCATGCTTTCGATaGCGTAGGGTGCGGCATTTA +
Preference number: 4 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASDSCFR*RRVRHL
Trigger: TAAATGCCGCACCCTACGGCATCGAAAGCATGAGTC...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAAGTTACAGCAAGACCCTaGTGTACCAGGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQVTARP*CTRTGW
Trigger: CCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAAC...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGGCATTTCCCATTGTGTaGCTCCAGGATTCGTTTGGG +
Preference number: 4 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKAFPIV*LQDSFG
Trigger: CCCAAACGAATCCTGGAGCCACACAATGGGAAATGC...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp AGAGTGTCATGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTACCTCCTTCCCAGTACTaGTCTGACGCAGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RVSCQELGKCLFLENCTLPPSQY*SDAAGP
Trigger: TGGGCCTGCTGCGTCAGACCAGTACTGGGAAGGAGG...TAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp ACAGAGACGGCGGCAGGCTGCCTAAAGGACCGTCACCCAGGCTGTTTCAAGAAGAGTTTAATCCGACTATaGTCAACTGGTAAATGGCCG +
Preference number: 4 (lower is better)
Translates to: TETAAGCLKDRHPGCFKKSLIRL*STGKWP
Trigger: CGGCCATTTACCAGTTGACCATAGTCGGATTAAACT...CTTCTTGAAACAGCCTGGGTGACGGTCCTTTAGGCAGCCTGCCGCCGTCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541713.5
CDS-3UTR TCA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTGCTATGTGTTGCTGTTaGACAGGAACCTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASAMCCC*TGTCSR
Trigger: TCTGCTACAGGTTCCTGTTCAACAGCAACACATAGC...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAACACACGGGGGAGCAGTaGTTGAGAACTAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQHTGEQ*LRTRSS
Trigger: GCTAGATCTAGTTCTCAATCACTGCTCCCCCGTGTG...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp TGTGGTTTCCAGCAGGTGCCTCTCTTCCAAATCACGGTCTGCTCAAGAAGAGTGATCATGTCCAGAGCGTaGGGTGTGAATATGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CGFQQVPLFQITVCSRRVIMSRA*GVNMAS
Trigger: GGAAGCCATATTCACACCTCACGCTCTGGACATGAT...CACTCTTCTTGAGCAGACCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGCTCAAGAAGAGTGTTaGCTTGGAATGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLAQEEC*LGMAEA
Trigger: AGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGC...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp GCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATACCCTGGGAAGGAAATGGGCTaGGGCCTAAGGTGTTCAACA +
Preference number: 4 (lower is better)
Translates to: ASLNHVQSVRCEYGFPYPGKEMG*GLRCST
Trigger: TGTTGAACACCTTAGGCCTCAGCCCATTTCCTTCCC...AGGGTATGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR GCA 90 bp CTCACCATAGCTCTGCAGGGTGACACCTCGAATGTTCCCACCACAGAATTTCTCGACTCATGCTTTCGATaGCGTAGGGTGCGGCATTTA +
Preference number: 4 (lower is better)
Translates to: LTIALQGDTSNVPTTEFLDSCFR*RRVRHL
Trigger: TAAATGCCGCACCCTACGGCATCGAAAGCATGAGTC...GAGAAATTCTGTGGTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp TATTGGCTTAAGGCATATAGCAGAGCAGCTCGCTACCTCTCTAACATAATGTGTGAGACGGCGGCAGGCTaGCTAAAGGACCGTCACCCA +
Preference number: 4 (lower is better)
Translates to: YWLKAYSRAARYLSNIMCETAAG*LKDRHP
Trigger: TGGGTGACGGTCCTTTAGGCAGCCTGCCGCCGTCTC...ACACATTATGTTAGAGAGGTAGCGAGCTGCTCTGCTATATGCCTTAAGCCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CTCACCATAGCTCTGCAGGGTGACACCTCGAATGTTCCCACCACAGAATTTCTCCTTGGCCACTCTACATaGGAAGTCACTGGCTTCATG +
Preference number: 4 (lower is better)
Translates to: LTIALQGDTSNVPTTEFLLGHST*EVTGFM
Trigger: CATGAAGCCAGTGACTTCCCATGTAGAGTGGCCAAG...GAGAAATTCTGTGGTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR CCA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGGGCAGAGGCGGACAGTaGGTGGAGGTGGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HRISLYWLLPRERQNVKMGRGGQ*VEVEWR
Trigger: CCTCCACTCCACCTCCACCCACTGTCCGCCTCTGCC...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp ACCCACCCGGTCATGCAGCCACGTATCCACACACACCTGAAAAGGTATTATACCAGTGTTGACTTGGAATaGCGGAGGCTGATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: THPVMQPRIHTHLKRYYTSVDLE*RRLIPK
Trigger: CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACT...GGTATAATACCTTTTCAGGTGTGTGTGGATACGTGGCTGCATGACCGGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTGTCCTTCTCGGGCAGTaGCGGCTCCCCTTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSVLLGQ*RLPFGW
Trigger: CCAGCCAAAGGGGAGCCGTCACTGCCCGAGAAGGAC...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp TATTGGCTTAAGGCATATAGCAGAGCAGCTCGCTACCTCTCTAACATAATGTGTTTCCCAGTACTGGTCTaGCGCAGCAGGCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: YWLKAYSRAARYLSNIMCFPVLV*RSRPMA
Trigger: TGCCATGGGCCTGCTGCGTCAGACCAGTACTGGGAA...ACACATTATGTTAGAGAGGTAGCGAGCTGCTCTGCTATATGCCTTAAGCCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGCTTCCAGTAACTCAGTaGATGGTCCTCGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLLPVTQ*MVLVLL
Trigger: GAGAAGGACGAGGACCATGCACTGAGTTACTGGAAG...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CTCACCATAGCTCTGCAGGGTGACACCTCGAATGTTCCCACCACAGAATTTCTCCACATCCGGGGAAGATaGGTTTTAGTGCAGAACCAA +
Preference number: 4 (lower is better)
Translates to: LTIALQGDTSNVPTTEFLHIRGR*VLVQNQ
Trigger: TTGGTTCTGCACTAAAACCCATCTTCCCCGGATGTG...GAGAAATTCTGTGGTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CTCACCATAGCTCTGCAGGGTGACACCTCGAATGTTCCCACCACAGAATTTCTCGGTTGGACTTGGACATaGGGCACATTAGTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LTIALQGDTSNVPTTEFLGWTWT*GTLVSR
Trigger: TCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACC...GAGAAATTCTGTGGTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTCAGGCAGGTTGGACTTaGACATGGGGCACATTAGTA +
Preference number: 4 (lower is better)
Translates to: HVMIRSCTGRLDLDMGHIQAGWT*TWGTLV
Trigger: TACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTG...AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp AAGACGGGTGTAGGCCCCTTCCCTCTGCGCCGCCAGCATGGTACTCTCTTTCACCTGATGAGTAAATATTaGCTTAAGGCATATAGCAGA +
Preference number: 4 (lower is better)
Translates to: KTGVGPFPLRRQHGTLFHLMSKY*LKAYSR
Trigger: TCTGCTATATGCCTTAAGCCAATATTTACTCATCAG...GTGAAAGAGAGTACCATGCTGGCGGCGCAGAGGGAAGGGGCCTACACCCGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR CAA 72 bp CACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTaGGACTTGGACATGGGGCACATTAGTAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HSHVMIRSCTGR*DLDMGHISKQR
Trigger: TCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp ACCCACCCGGTCATGCAGCCACGTATCCACACACACCTGAAAAGGTATTATACCTATGGTCAAAGGGACTaGCGTCTCTGTACCTATTTC +
Preference number: 4 (lower is better)
Translates to: THPVMQPRIHTHLKRYYTYGQRD*RLCTYF
Trigger: GAAATAGGTACAGAGACGTCAGTCCCTTTGACCATA...GGTATAATACCTTTTCAGGTGTGTGTGGATACGTGGCTGCATGACCGGGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR TCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAAACCATCTCCCAAAAGTaGCCGCATGTGTTAGGCAAA +
Preference number: 4 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQTISQK*PHVLGK
Trigger: TTTGCCTAACACATGCGGTCACTTTTGGGAGATGGT...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGCTAACAGCACTTTCTTaGTATCAACGGAAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKLTALS*YQRKKG
Trigger: ACCCTTCTTCCGTTGATATCAAGAAAGTGCTGTTAG...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGCTAACTTCAGTGTCTTaGCTCATGCTTTCGATGCCG +
Preference number: 4 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLLTSVS*LMLSMP
Trigger: CGGCATCGAAAGCATGAGTCAAGACACTGAAGTTAG...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGGAGAAAGGCAAAATGTaGAAATGCTGGCAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKEKGKM*KCWQES
Trigger: ACTCTCTTGCCAGCATTTTCACATTTTGCCTTTCTC...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CATCTGTTTCACATCAGCAGGGATAGAAAGAAACAGGAGTTACTCATCCTGGTTTTCCAGACCTGCCGATaGCTGCACTGCAGTGCACCA +
Preference number: 4 (lower is better)
Translates to: HLFHISRDRKKQELLILVFQTCR*LHCSAP
Trigger: TGGTGCACTGCAGTGCAGGCATCGGCAGGTCTGGAA...AACCAGGATGAGTAACTCCTGTTTCTTTCTATCCCTGCTGATGTGAAACAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR GCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTTTACCTACCGCGGCATaGCTGCTAGTCGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSLPTAA*LLVGRG
Trigger: CCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAA...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATACCCTCTATTCCTGGAAAACTaGACCCTATTGCTGAGCGAC +
Preference number: 4 (lower is better)
Translates to: ASLNHVQSVRCEYGFPYPLFLEN*TLLLSD
Trigger: GTCGCTCAGCAATAGGGTGCAGTTTTCCAGGAATAG...AGGGTATGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGCACCCACTGGTGATTTaGGAAGAACTCCCTGCATTT +
Preference number: 4 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLHPLVI*EELPAF
Trigger: AAATGCAGGGAGTTCTTCCCAAATCACCAGTGGGTG...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTCTGTTTCAAGAAGTGTaGTTTCCAGCAGGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: HVMIRSCTGRLDLDMGHILFQEV*FPAGAS
Trigger: AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAG...AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CATCTGTTTCACATCAGCAGGGATAGAAAGAAACAGGAGTTACTCATCCTGGTTCCAGAGCGTGAGGTGTaGATATGGCTTCCCATACCC +
Preference number: 4 (lower is better)
Translates to: HLFHISRDRKKQELLILVPEREV*IWLPIP
Trigger: GGGTATGGGAAGCCATATTCACACCTCACGCTCTGG...AACCAGGATGAGTAACTCCTGTTTCTTTCTATCCCTGCTGATGTGAAACAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR TCA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGTGGACTTTACGTACTaGGATGTGGTAACCATTGTG +
Preference number: 4 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLVDFTY*DVVTIV
Trigger: CACAATGGTTACCACATCTCAGTACGTAAAGTCCAC...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR GCA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGTATGGAGTGGAGAGTTaGTCCCTGCAGATTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVEYGVES*SLQIQG
Trigger: CCCTTGAATCTGCAGGGAGCAACTCTCCACTCCATA...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CACGGTCTGCTCAAGAAGAGTGTTGACTTGGAATGGCGGAGGCTGATCCCAAAGTCACTAAATAACAACTaGTTACAACCGTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HGLLKKSVDLEWRRLIPKSLNNN*LQPSSF
Trigger: GAAGGAGGACGGTTGTAAGCAGTTGTTATTTAGTGA...CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCAGACCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAAAATGGCTTGTGGATTTaGTACTCAAAGTGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQNGLWI*YSKWKG
Trigger: CCCCTTCCACTTTGAGTACCAAATCCACAAGCCATT...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGCAAATGCCTATTCCTaGAAAACTGCACCCTATTGC +
Preference number: 4 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLANAYS*KTAPYC
Trigger: GCAATAGGGTGCAGTTTTCCAGGAATAGGCATTTGC...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GGCCCATGGCAAAGCCTTCCATTCCCAGTACTACCTGAGGATTTATTATTGTACGGCAAAGCGTCAATTTaGGAAGGAAATGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GPWQSLPFPVLPEDLLLYGKASI*EGNGLR
Trigger: CCTCAGCCCATTTCCTTCCCAAATTGACGCTTTGCC...GTACAATAATAAATCCTCAGGTAGTACTGGGAATGGAAGGCTTTGCCATGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR TCA 90 bp GTCCCTGCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCACTGACTCTCGGACTTTaGAAAGAAAGTTCAAGAATG +
Preference number: 4 (lower is better)
Translates to: VPASLNHVQSVRCEYGFPLTLGL*KESSRM
Trigger: CATTCTTGAACTTTCTTTTCAAAGTCCGAGAGTCAG...TGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGCAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTTTCCTTTTTCTTCCTTaGTGGGGCAGTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: HVMIRSCTGRLDLDMGHIFLFLP*WGSLYP
Trigger: AGGATAAAGACTGCCCCATCAAGGAAGAAAAAGGAA...AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp AGAGTGTCATGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTACTAACTTCAGTGTCTTaGCTCATGCTTTCGATGCCG +
Preference number: 4 (lower is better)
Translates to: RVSCQELGKCLFLENCTLLTSVS*LMLSMP
Trigger: CGGCATCGAAAGCATGAGTCAAGACACTGAAGTTAG...TAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CACTGTTCTTCAAACAACACTGGTAAGTTTGTTAAGTTATCTGAGGGCCCTACACATAGCTCTGCAGGGTaGCACCTCGAATGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: HCSSNNTGKFVKLSEGPTHSSAG*HLECSH
Trigger: GTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATG...TGTAGGGCCCTCAGATAACTTAACAAACTTACCAGTGTTGTTTGAAGAACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR TCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAAAACTCTAACCCCAGCTaGTTGACAACATCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQNSNPS*LTTSVS
Trigger: TGAAACAGATGTTGTCAATCAGCTGGGGTTAGAGTT...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR GCA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGAGAAGGTTCCAGACCTaGCGATGCCTGCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: HRISLYWLLPRERQNVKMRRFQT*RCLHCS
Trigger: ACTGCAGTGCAGGCATCGGCAGGTCTGGAACCTTCT...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp AGAGTGTCATGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTAGTAATGATCAGGTCATaGACAGGCAGGTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: RVSCQELGKCLFLENCTLVMIRS*TGRLDL
Trigger: CAAGTCCAACCTGCCTGTGCATGACCTGATCATTAC...TAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp AGAGTGTCATGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTACTATTCCTGGAAAACTaGACCCTATTGCTGAGCGAC +
Preference number: 4 (lower is better)
Translates to: RVSCQELGKCLFLENCTLLFLEN*TLLLSD
Trigger: GTCGCTCAGCAATAGGGTGCAGTTTTCCAGGAATAG...TAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTCAGGAATTAGGCAAATaGCTATTCCTGGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: HVMIRSCTGRLDLDMGHIQELGK*LFLENC
Trigger: GCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTG...AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAACAGGAATTAGGCAAATaGCTATTCCTGGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQQELGK*LFLENC
Trigger: GCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTG...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGGTTACAGCAAGACCCTaGTGTACCAGGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRISLYWLLPRERQNVKMVTARP*CTRTGW
Trigger: CCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAAC...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CATTTCAAGCACATATTTTTCATCAGGACACAAGAAGACCTTACATGCATTCTAGAGACGGCGGCAGGCTaGCTAAAGGACCGTCACCCA +
Preference number: 4 (lower is better)
Translates to: HFKHIFFIRTQEDLTCILETAAG*LKDRHP
Trigger: TGGGTGACGGTCCTTTAGGCAGCCTGCCGCCGTCTC...TAGAATGCATGTAAGGTCTTCTTGTGTCCTGATGAAAAATATGTGCTTGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTGGATATCCTGGTAAATaGCCGCCCAGCTCCCGGACT +
Preference number: 4 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSGYPGK*PPSSRT
Trigger: AGTCCGGGAGCTGGGCGGCCATTTACCAGGATATCC...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR CCA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGTCTGCGCCGCCAGCATaGTACTCTCTTTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: HRISLYWLLPRERQNVKMSAPPA*YSLSLS
Trigger: GGAGAGTGAAAGAGAGTACCATGCTGGCGGCGCAGA...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGCATGCACAGGCAGGTTaGACTTGGACATGGGGCACA +
Preference number: 4 (lower is better)
Translates to: HRISLYWLLPRERQNVKMHAQAG*TWTWGT
Trigger: TGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGAATTTCTCTGTACTaGCTTCTACCACGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: HVMIRSCTGRLDLDMGHIRISLY*LLPRER
Trigger: CCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCT...AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
3UTR CAA 72 bp TTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTATaGCTGAGCGACAATGACTTCAGCAACAGGCTTAGG +
Preference number: 4 (lower is better)
Translates to: LGKCLFLENCTL*LSDNDFSNRLR
Trigger: CCTAAGCCTGTTGCTGAAGTCATTGTCGCTCAGCAATAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTGAAAGCTCCTTCCACTaGTCCTGCACGGAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSESSFH*SCTEES
Trigger: GGACTCTTCCGTGCAGGATCAGTGGAAGGAGCTTTC...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGTCCTTCACCCACTGGTaGTTTGGGAAGAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: HRISLYWLLPRERQNVKMSFTHW*FGKNSL
Trigger: CAGGGAGTTCTTCCCAAATCACCAGTGGGTGAAGGA...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGGCTCAAGAAGAGTGTTaGCTTGGAATGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: HRISLYWLLPRERQNVKMAQEEC*LGMAEA
Trigger: AGCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGC...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp TGTGGTTTCCAGCAGGTGCCTCTCTTCCAAATCACGGTCTGCTCAAGAAGAGTGAATGCAAACCCATCATaGATATGGCAAGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: CGFQQVPLFQITVCSRRVNANPS*IWQVGK
Trigger: TTTTCCAACTTGCCATATTCATGATGGGTTTGCATT...CACTCTTCTTGAGCAGACCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GGCCCATGGCAAAGCCTTCCATTCCCAGTACTACCTGAGGATTTATTATTGTACGTCACTAGAGTGTCATaGCAGGAATTAGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: GPWQSLPFPVLPEDLLLYVTRVS*QELGKC
Trigger: GCATTTGCCTAATTCCTGGCATGACACTCTAGTGAC...GTACAATAATAAATCCTCAGGTAGTACTGGGAATGGAAGGCTTTGCCATGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp AGAGTGTCATGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTACTCGGGAGCTACAGCTaGCGTGTTTTTCATGTTAAA +
Preference number: 4 (lower is better)
Translates to: RVSCQELGKCLFLENCTLLGSYS*RVFHVK
Trigger: TTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG...TAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CATTTCAAGCACATATTTTTCATCAGGACACAAGAAGACCTTACATGCATTCTACCTCCTTCCCAGTACTaGTCTGACGCAGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: HFKHIFFIRTQEDLTCILPPSQY*SDAAGP
Trigger: TGGGCCTGCTGCGTCAGACCAGTACTGGGAAGGAGG...TAGAATGCATGTAAGGTCTTCTTGTGTCCTGATGAAAAATATGTGCTTGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GGCCCATGGCAAAGCCTTCCATTCCCAGTACTACCTGAGGATTTATTATTGTACGCAAATGCCTATTCCTaGAAAACTGCACCCTATTGC +
Preference number: 4 (lower is better)
Translates to: GPWQSLPFPVLPEDLLLYANAYS*KTAPYC
Trigger: GCAATAGGGTGCAGTTTTCCAGGAATAGGCATTTGC...GTACAATAATAAATCCTCAGGTAGTACTGGGAATGGAAGGCTTTGCCATGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACTGATGAGTAAATATTaGCTTAAGGCATATAGCAGA +
Preference number: 4 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGALMSKY*LKAYSR
Trigger: TCTGCTATATGCCTTAAGCCAATATTTACTCATCAG...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp GGCCCATGGCAAAGCCTTCCATTCCCAGTACTACCTGAGGATTTATTATTGTACTTCCTTTTTCTTCCTTaGTGGGGCAGTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: GPWQSLPFPVLPEDLLLYFLFLP*WGSLYP
Trigger: AGGATAAAGACTGCCCCATCAAGGAAGAAAAAGGAA...GTACAATAATAAATCCTCAGGTAGTACTGGGAATGGAAGGCTTTGCCATGGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp TATTGGCTTAAGGCATATAGCAGAGCAGCTCGCTACCTCTCTAACATAATGTGTGCTATGTGTTGCTGTTaGACAGGAACCTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: YWLKAYSRAARYLSNIMCAMCCC*TGTCSR
Trigger: TCTGCTACAGGTTCCTGTTCAACAGCAACACATAGC...ACACATTATGTTAGAGAGGTAGCGAGCTGCTCTGCTATATGCCTTAAGCCAATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp AGAGTGTCATGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTACAAGAAGACCTTACATaGATTCTAATACACACGGGG +
Preference number: 4 (lower is better)
Translates to: RVSCQELGKCLFLENCTLQEDLT*ILIHTG
Trigger: CCCCGTGTGTATTAGAATGCATGTAAGGTCTTCTTG...TAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp AGAGTGTCATGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTATTCCAAATCACGGTCTaGTCAAGAAGAGTGTTGACT +
Preference number: 4 (lower is better)
Translates to: RVSCQELGKCLFLENCTLFQITV*SRRVLT
Trigger: AGTCAACACTCTTCTTGAGCAGACCGTGATTTGGAA...TAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp GTAAGTTTGTTAAGTTATCTGAGGGCCCTACACAGGCAAAGCGTCAATTTGGGACTCGGGAGCTACAGCTaGCGTGTTTTTCATGTTAAA +
Preference number: 4 (lower is better)
Translates to: VSLLSYLRALHRQSVNLGLGSYS*RVFHVK
Trigger: TTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG...TCCCAAATTGACGCTTTGCCTGTGTAGGGCCCTCAGATAACTTAACAAACTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR CCA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGAGTTTAATCCGACTATaGTCAAAGGGACTGACGTCT +
Preference number: 4 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVESLIRL*SKGLTS
Trigger: AGACGTCAGTCCCTTTGACCATAGTCGGATTAAACT...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR TCA 90 bp GTAAGTTTGTTAAGTTATCTGAGGGCCCTACACAGGCAAAGCGTCAATTTGGGAGAGAAAGGCAAAATGTaGAAATGCTGGCAAGAGAGT +
Preference number: 4 (lower is better)
Translates to: VSLLSYLRALHRQSVNLGEKGKM*KCWQES
Trigger: ACTCTCTTGCCAGCATTTTCACATTTTGCCTTTCTC...TCCCAAATTGACGCTTTGCCTGTGTAGGGCCCTCAGATAACTTAACAAACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR GCA 90 bp CATTTCAAGCACATATTTTTCATCAGGACACAAGAAGACCTTACATGCATTCTAAGAAGGTTCCAGACCTaGCGATGCCTGCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: HFKHIFFIRTQEDLTCILRRFQT*RCLHCS
Trigger: ACTGCAGTGCAGGCATCGGCAGGTCTGGAACCTTCT...TAGAATGCATGTAAGGTCTTCTTGTGTCCTGATGAAAAATATGTGCTTGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CACAGAATTTCTCTGTACTGGCTTCTACCACGAGAAAGGCAAAATGTGAAAATGGTAATGATCAGGTCATaGACAGGCAGGTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: HRISLYWLLPRERQNVKMVMIRS*TGRLDL
Trigger: CAAGTCCAACCTGCCTGTGCATGACCTGATCATTAC...CATTTTCACATTTTGCCTTTCTCGTGGTAGAAGCCAGTACAGAGAAATTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTCAGGCAGGTTGGACTTaGACATGGGGCACATTAGTA +
Preference number: 4 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSQAGWT*TWGTLV
Trigger: TACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTG...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTAGTGTTGACTTGGAATaGCGGAGGCTGATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSSVDLE*RRLIPK
Trigger: CTTTGGGATCAGCCTCCGCCATTCCAAGTCAACACT...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp GCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATACCCTCAATTCTATATCAAGTaGACTTTACGTACTGAGATG +
Preference number: 4 (lower is better)
Translates to: ASLNHVQSVRCEYGFPYPQFYIK*TLRTEM
Trigger: CATCTCAGTACGTAAAGTCCACTTGATATAGAATTG...AGGGTATGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR TCA 90 bp CATTTCAAGCACATATTTTTCATCAGGACACAAGAAGACCTTACATGCATTCTACACACGGGGGAGCAGTaGTTGAGAACTAGATCTAGC +
Preference number: 4 (lower is better)
Translates to: HFKHIFFIRTQEDLTCILHTGEQ*LRTRSS
Trigger: GCTAGATCTAGTTCTCAATCACTGCTCCCCCGTGTG...TAGAATGCATGTAAGGTCTTCTTGTGTCCTGATGAAAAATATGTGCTTGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp AGAGTGTCATGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTAGTATCCACACACACCTaGAAAGGTATTATACCAAAA +
Preference number: 4 (lower is better)
Translates to: RVSCQELGKCLFLENCTLVSTHT*KGIIPK
Trigger: TTTTGGTATAATACCTTTTCAGGTGTGTGTGGATAC...TAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp GGCCCATGGCAAAGCCTTCCATTCCCAGTACTACCTGAGGATTTATTATTGTACAATGCAAACCCATCATaGATATGGCAAGTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GPWQSLPFPVLPEDLLLYNANPS*IWQVGK
Trigger: TTTTCCAACTTGCCATATTCATGATGGGTTTGCATT...GTACAATAATAAATCCTCAGGTAGTACTGGGAATGGAAGGCTTTGCCATGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp TATTGGCTTAAGGCATATAGCAGAGCAGCTCGCTACCTCTCTAACATAATGTGTTTCCAAATCACGGTCTaGTCAAGAAGAGTGTTGACT +
Preference number: 4 (lower is better)
Translates to: YWLKAYSRAARYLSNIMCFQITV*SRRVLT
Trigger: AGTCAACACTCTTCTTGAGCAGACCGTGATTTGGAA...ACACATTATGTTAGAGAGGTAGCGAGCTGCTCTGCTATATGCCTTAAGCCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR TCA 90 bp CATTTCAAGCACATATTTTTCATCAGGACACAAGAAGACCTTACATGCATTCTATACCCTTGGAATGTCTaGGTTACAGCAAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: HFKHIFFIRTQEDLTCILYPWNV*VTARPC
Trigger: GCAGGGTCTTGCTGTAACTCAGACATTCCAAGGGTA...TAGAATGCATGTAAGGTCTTCTTGTGTCCTGATGAAAAATATGTGCTTGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTGTCACTAGAGTGTCATaGCAGGAATTAGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSVTRVS*QELGKC
Trigger: GCATTTGCCTAATTCCTGGCATGACACTCTAGTGAC...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CATTTCAAGCACATATTTTTCATCAGGACACAAGAAGACCTTACATGCATTCTAGCATTTCCCATTGTGTaGCTCCAGGATTCGTTTGGG +
Preference number: 4 (lower is better)
Translates to: HFKHIFFIRTQEDLTCILAFPIV*LQDSFG
Trigger: CCCAAACGAATCCTGGAGCCACACAATGGGAAATGC...TAGAATGCATGTAAGGTCTTCTTGTGTCCTGATGAAAAATATGTGCTTGAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp CATTTCAAGCACATATTTTTCATCAGGACACAAGAAGACCTTACATGCATTCTATTGGGAAGAACTCCCTaGATTTCCCATTGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: HFKHIFFIRTQEDLTCILLGRTP*ISHCVA
Trigger: AGCCACACAATGGGAAATGCAGGGAGTTCTTCCCAA...TAGAATGCATGTAAGGTCTTCTTGTGTCCTGATGAAAAATATGTGCTTGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR GCA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTCAAGAAGACCTTACATaGATTCTAATACACACGGGG +
Preference number: 4 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSQEDLT*ILIHTG
Trigger: CCCCGTGTGTATTAGAATGCATGTAAGGTCTTCTTG...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CCA 90 bp CATTTCAAGCACATATTTTTCATCAGGACACAAGAAGACCTTACATGCATTCTATGTCTTACAGGTAATTaGGTAAGGGATATGGTTTTG +
Preference number: 4 (lower is better)
Translates to: HFKHIFFIRTQEDLTCILCLTGN*VRDMVL
Trigger: CAAAACCATATCCCTTACCCAATTACCTGTAAGACA...TAGAATGCATGTAAGGTCTTCTTGTGTCCTGATGAAAAATATGTGCTTGAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371621.5
3UTR CAA 72 bp TTGTGTCTTACAGGTAATTGGGTAAGGGATATGGTTTaGAGATTACAACTCAAAACACTGTTCTTCAAACAA +
Preference number: 4 (lower is better)
Translates to: LCLTGNWVRDMV*RLQLKTLFFKQ
Trigger: TTGTTTGAAGAACAGTGTTTTGAGTTGTAATCTCAAAACCATATCCCTTACCCAATTACCTGTAAGACACAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS GCA 90 bp GGCCAGGGCGGCTGCTGCGCCTCCTTCTCGGCCCACTGCGCCGTCTaGCGCTCTAGGCCGCGTCGCGCTCTTAGCCCCGAGGCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: GQGGCCASFSAHCAV*RSRPRRALSPEARC
Trigger: GCAGCGGGCCTCGGGGCTAAGAGCGCGACGCGGCCTAGAGCGGCAGACGGCGCAGTGGGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS GCA 90 bp TCCATGACGGGCCAGGGCGGCTGCTGCGCCTCCTTCTCGGCCCACTaGGCCGTCTGCCGCTCTAGGCCGCGTCGCGCTCTTAGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: SMTGQGGCCASFSAH*AVCRSRPRRALSPE
Trigger: CTCGGGGCTAAGAGCGCGACGCGGCCTAGAGCGGCAGACGGCGCAGTGGGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCCCGTCATGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS GCA 90 bp TGCTCGAACTCCTTTTCCATCTCCATGACGGGCCAGGGCGGCTGCTaGGCCTCCTTCTCGGCCCACTGCGCCGTCTGCCGCTCTAGGCCG +
Preference number: 5 (lower is better)
Translates to: CSNSFSISMTGQGGC*ASFSAHCAVCRSRP
Trigger: CGGCCTAGAGCGGCAGACGGCGCAGTGGGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCCCGTCATGGAGATGGAAAAGGAGTTCGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp TGGGGCAGACGCGCCTCTCTCGGCAAGGTGAACCGGGACAGAGACGGCGGCAGGGCCCAGCTCCCGGACTaGTCGATCTGCTCGAACTCC +
Preference number: 5 (lower is better)
Translates to: WGRRASLGKVNRDRDGGRAQLPD*SICSNS
Trigger: GGAGTTCGAGCAGATCGACAAGTCCGGGAGCTGGGC...CCTGCCGCCGTCTCTGTCCCGGTTCACCTTGCCGAGAGAGGCGCGTCTGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS GCA 90 bp CCCGCTGCAATCCCCGACCCCTGCAGCTACCGCCGCCCTAGCCGCTaGTGCTTCTTCATGTCAACCGGCAGCCGGAACTACGCATCACGC +
Preference number: 5 (lower is better)
Translates to: PAAIPDPCSYRRPSR*CFFMSTGSRNYASR
Trigger: GCGTGATGCGTAGTTCCGGCTGCCGGTTGACATGAAGAAGCAGCAGCGGCTAGGGCGGCGGTAGCTGCAGGGGTCGGGGATTGCAGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541713.5
CDS GCA 90 bp ATCTGCTCGAACTCCTTTTCCATCTCCATGACGGGCCAGGGCGGCTaGTGCGCCTCCTTCTCGGCCCACTGCGCCGTCTGCCGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: ICSNSFSISMTGQGG*CASFSAHCAVCRSR
Trigger: CCTAGAGCGGCAGACGGCGCAGTGGGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCCCGTCATGGAGATGGAAAAGGAGTTCGAGCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS GCA 90 bp GCTGCAATCCCCGACCCCTGCAGCTACCGCCGCCCTAGCCGCTGCTaGTTCTTCATGTCAACCGGCAGCCGGAACTACGCATCACGCCTG +
Preference number: 5 (lower is better)
Translates to: AAIPDPCSYRRPSRC*FFMSTGSRNYASRL
Trigger: CAGGCGTGATGCGTAGTTCCGGCTGCCGGTTGACATGAAGAAGCAGCAGCGGCTAGGGCGGCGGTAGCTGCAGGGGTCGGGGATTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541713.5
CDS-3UTR CAA 90 bp GTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTGCTCAAGAAGAGTGTaGACTTGGAATGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: VQNQRPSGARLSTRSGGPCSRRV*TWNGGG
Trigger: GCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCA...AGGGCCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp AAGACGGGTGTAGGCCCCTTCCCTCTGCGCCGCCAGCATGGTACTCTCTTTCACCAGGCCCCACAGGGTTaGAGGGTGGGGCAGACGCGC +
Preference number: 5 (lower is better)
Translates to: KTGVGPFPLRRQHGTLFHQAPQG*RVGQTR
Trigger: GCGCGTCTGCCCCACCCTCAAACCCTGTGGGGCCTG...GTGAAAGAGAGTACCATGCTGGCGGCGCAGAGGGAAGGGGCCTACACCCGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS TCA 90 bp AGCTCCCGGACTTGTCGATCTGCTCGAACTCCTTTTCCATCTCCATaGCGGGCCAGGGCGGCTGCTGCGCCTCCTTCTCGGCCCACTGCG +
Preference number: 5 (lower is better)
Translates to: SSRTCRSARTPFPSP*RARAAAAPPSRPTA
Trigger: CGCAGTGGGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCCCGTCATGGAGATGGAAAAGGAGTTCGAGCAGATCGACAAGTCCGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GGCCCGGCTCTCTACGCGGTCCGGCGGCCCTTACCTACCGCGGCATGCCTGCTAGGGTCAGGCTATGTGTaGCTGTTGAACAGGAACCTG +
Preference number: 5 (lower is better)
Translates to: GPALYAVRRPLPTAACLLGSGYV*LLNRNL
Trigger: CAGGTTCCTGTTCAACAGCAACACATAGCCTGACCC...TAGCAGGCATGCCGCGGTAGGTAAGGGCCGCCGGACCGCGTAGAGAGCCGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp TTACCTACCGCGGCATGCCTGCTAGTCGGGCGTGGGCTCTGCGGGCAGAGGCGGGAAGGGTCTTTCCTCTaGTCCATCAGCAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: LPTAACLLVGRGLCGQRREGSFL*SISKRQ
Trigger: CTGCCTCTTGCTGATGGACAAGAGGAAAGACCCTTC...CCGCCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp TTTAGTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGTCCCTGCATTTCCCATaGTGTGGCTCCAGGATTCGT +
Preference number: 5 (lower is better)
Translates to: FSAEPTSVRGPALYAVRRSLHFP*CGSRIR
Trigger: ACGAATCCTGGAGCCACACAATGGGAAATGCAGGGA...CCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCACTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp TTTAGTGCAGAACCAACGTCCGTCCGGGGCCCGGCTCTCTACGCGGTCCGGCGGATATGGAGTGGAGAGTaGCTCCCTGCAGATTCAAGG +
Preference number: 5 (lower is better)
Translates to: FSAEPTSVRGPALYAVRRIWSGE*LPADSR
Trigger: CCTTGAATCTGCAGGGAGCAACTCTCCACTCCATAT...CCGCCGGACCGCGTAGAGAGCCGGGCCCCGGACGGACGTTGGTTCTGCACTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTGGCTCCAGGATTCGTTaGGGTGGCCGGGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASGSRIR*GGRGGG
Trigger: CCCACCTCCCCGGCCACCCAAACGAATCCTGGAGCC...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp TTACCTACCGCGGCATGCCTGCTAGTCGGGCGTGGGCTCTGCGGGCAGAGGCGGCTTCCTTTTTCTTCCTaGATGGGGCAGTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: LPTAACLLVGRGLCGQRRLPFSS*MGQSLS
Trigger: GGATAAAGACTGCCCCATCAAGGAAGAAAAAGGAAG...CCGCCTCTGCCCGCAGAGCCCACGCCCGACTAGCAGGCATGCCGCGGTAGGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp AAGACGGGTGTAGGCCCCTTCCCTCTGCGCCGCCAGCATGGTACTCTCTTTCACGTAGCCACGCACATGTaGACCAGGAAGGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KTGVGPFPLRRQHGTLFHVATHM*TRKGFQ
Trigger: CTGGAAGCCCTTCCTGGTCAACATGTGCGTGGCTAC...GTGAAAGAGAGTACCATGCTGGCGGCGCAGAGGGAAGGGGCCTACACCCGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACTCATGCACAGGCAGGTaGGACTTGGACATGGGGCAC +
Preference number: 5 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHSCTGR*DLDMGH
Trigger: GTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGA...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS GCA 90 bp CCTGGGTCTCTTCCTTCACCCACTGGTGATTTGGGAAGAACTCCCTaGATTTCCCATTGTGTGGCTCCAGGATTCGTTTGGGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: PGSLPSPTGDLGRTP*ISHCVAPGFVWVAG
Trigger: CCCGGCCACCCAAACGAATCCTGGAGCCACACAATGGGAAATGCAGGGAGTTCTTCCCAAATCACCAGTGGGTGAAGGAAGAGACCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CTCACCATAGCTCTGCAGGGTGACACCTCGAATGTTCCCACCACAGAATTTCTCGCCCAGCTCCCGGACTaGTCGATCTGCTCGAACTCC +
Preference number: 5 (lower is better)
Translates to: LTIALQGDTSNVPTTEFLAQLPD*SICSNS
Trigger: GGAGTTCGAGCAGATCGACAAGTCCGGGAGCTGGGC...GAGAAATTCTGTGGTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATGGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GGCCCATGGCAAAGCCTTCCATTCCCAGTACTACCTGAGGATTTATTATTGTACCAGGCCCCACAGGGTTaGAGGGTGGGGCAGACGCGC +
Preference number: 5 (lower is better)
Translates to: GPWQSLPFPVLPEDLLLYQAPQG*RVGQTR
Trigger: GCGCGTCTGCCCCACCCTCAAACCCTGTGGGGCCTG...GTACAATAATAAATCCTCAGGTAGTACTGGGAATGGAAGGCTTTGCCATGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACGAAGGGTCTTTCCTCTaGTCCATCAGCAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHEGSFL*SISKRQ
Trigger: CTGCCTCTTGCTGATGGACAAGAGGAAAGACCCTTC...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACTCCCTGCATTTCCCATaGTGTGGCTCCAGGATTCGT +
Preference number: 5 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHSLHFP*CGSRIR
Trigger: ACGAATCCTGGAGCCACACAATGGGAAATGCAGGGA...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS TCA 90 bp ATGGGGCAGTCTTTATCCTCCTGGGTCTCTTCCTTCACCCACTGGTaGTTTGGGAAGAACTCCCTGCATTTCCCATTGTGTGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: MGQSLSSWVSSFTHW*FGKNSLHFPLCGSR
Trigger: CCTGGAGCCACACAATGGGAAATGCAGGGAGTTCTTCCCAAATCACCAGTGGGTGAAGGAAGAGACCCAGGAGGATAAAGACTGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp AAAGGACCGTCACCCAGGCTGTTTCAAGAAGTGTGGTTTCCAGCAGGTGCCTCTTTCTCCATCACTCTGTaGAGCATGACGACACCCCTG +
Preference number: 5 (lower is better)
Translates to: KGPSPRLFQEVWFPAGASFSITL*SMTTPL
Trigger: CAGGGGTGTCGTCATGCTCAACAGAGTGATGGAGAA...AGAGGCACCTGCTGGAAACCACACTTCTTGAAACAGCCTGGGTGACGGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp ACAGAGACGGCGGCAGGCTGCCTAAAGGACCGTCACCCAGGCTGTTTCAAGAAGTCTAACTTCAGTGTCTaGACTCATGCTTTCGATGCC +
Preference number: 5 (lower is better)
Translates to: TETAAGCLKDRHPGCFKKSNFSV*THAFDA
Trigger: GGCATCGAAAGCATGAGTCAAGACACTGAAGTTAGA...CTTCTTGAAACAGCCTGGGTGACGGTCCTTTAGGCAGCCTGCCGCCGTCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CTTAGGAACCACAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGTAGCCACGCACATGTaGACCAGGAAGGGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LRNHSHVMIRSCTGRLDLVATHM*TRKGFQ
Trigger: CTGGAAGCCCTTCCTGGTCAACATGTGCGTGGCTAC...CAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTGTGGTTCCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCAGGGTCAGGCTATGTGTaGCTGTTGAACAGGAACCTG +
Preference number: 5 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGAGSGYV*LLNRNL
Trigger: CAGGTTCCTGTTCAACAGCAACACATAGCCTGACCC...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS CCA 90 bp GCAGTCTTTATCCTCCTGGGTCTCTTCCTTCACCCACTGGTGATTTaGGAAGAACTCCCTGCATTTCCCATTGTGTGGCTCCAGGATTCG +
Preference number: 5 (lower is better)
Translates to: AVFILLGLFLHPLVI*EELPAFPIVWLQDS
Trigger: CGAATCCTGGAGCCACACAATGGGAAATGCAGGGAGTTCTTCCCAAATCACCAGTGGGTGAAGGAAGAGACCCAGGAGGATAAAGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GTCCCTGCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATTCTCCATCACTCTGTaGAGCATGACGACACCCCTG +
Preference number: 5 (lower is better)
Translates to: VPASLNHVQSVRCEYGFPFSITL*SMTTPL
Trigger: CAGGGGTGTCGTCATGCTCAACAGAGTGATGGAGAA...TGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GTCCCTGCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCAACAGGCAGGTTGGACTaGGACATGGGGCACATTAGT +
Preference number: 5 (lower is better)
Translates to: VPASLNHVQSVRCEYGFPTGRLD*DMGHIS
Trigger: ACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGT...TGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGCAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp TGTGGTTTCCAGCAGGTGCCTCTCTTCCAAATCACGGTCTGCTCAAGAAGAGTGTGCTCAAGAAGAGTGTaGACTTGGAATGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: CGFQQVPLFQITVCSRRVCSRRV*TWNGGG
Trigger: GCCTCCGCCATTCCAAGTCAACACTCTTCTTGAGCA...CACTCTTCTTGAGCAGACCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAATCCCCCATGATGAATTaGGCACCTTCGATCACAGCC +
Preference number: 5 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQSPMMN*APSITA
Trigger: GGCTGTGATCGAAGGTGCCAAATTCATCATGGGGGA...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GTCCCTGCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATCACCCACTGGTGATTaGGGAAGAACTCCCTGCATT +
Preference number: 5 (lower is better)
Translates to: VPASLNHVQSVRCEYGFPSPTGD*GRTPCI
Trigger: AATGCAGGGAGTTCTTCCCAAATCACCAGTGGGTGA...TGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGCAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTACAGGCAGGTTGGACTaGGACATGGGGCACATTAGT +
Preference number: 5 (lower is better)
Translates to: HVMIRSCTGRLDLDMGHITGRLD*DMGHIS
Trigger: ACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGT...AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CTCACCATAGCTCTGCAGGGTGACACCTCGAATGTTCCCACCACAGAATTTCTCTGGCTTCCCATACCCTaGGAATGTCTGAGTTACAGC +
Preference number: 5 (lower is better)
Translates to: LTIALQGDTSNVPTTEFLWLPIP*ECLSYS
Trigger: GCTGTAACTCAGACATTCCAAGGGTATGGGAAGCCA...GAGAAATTCTGTGGTGGGAACATTCGAGGTGTCACCCTGCAGAGCTATGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GGAATGTCTGAGTTACAGCAAGACCCTGCTGTACCAGGACAGGCTGGGCCTCACCCTGACTCTCGGACTTaGAAAAGAAAGTTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: GMSELQQDPAVPGQAGPHPDSRT*KRKFKN
Trigger: ATTCTTGAACTTTCTTTTCAAAGTCCGAGAGTCAGG...GTGAGGCCCAGCCTGTCCTGGTACAGCAGGGTCTTGCTGTAACTCAGACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCATACCCTTCACCCACTGGTGATTaGGGAAGAACTCCCTGCATT +
Preference number: 5 (lower is better)
Translates to: ASLNHVQSVRCEYGFPYPSPTGD*GRTPCI
Trigger: AATGCAGGGAGTTCTTCCCAAATCACCAGTGGGTGA...AGGGTATGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp TGTGGTTTCCAGCAGGTGCCTCTCTTCCAAATCACGGTCTGCTCAAGAAGAGTGGAAAACTGCACCCTATaGCTGAGCGACAATGACTTC +
Preference number: 5 (lower is better)
Translates to: CGFQQVPLFQITVCSRRVENCTL*LSDNDF
Trigger: GAAGTCATTGTCGCTCAGCAATAGGGTGCAGTTTTC...CACTCTTCTTGAGCAGACCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp GTCCCTGCTTCCCTAAATCATGTCCAGAGCGTGAGGTGTGAATATGGCTTCCCAGAAAACTGCACCCTATaGCTGAGCGACAATGACTTC +
Preference number: 5 (lower is better)
Translates to: VPASLNHVQSVRCEYGFPENCTL*LSDNDF
Trigger: GAAGTCATTGTCGCTCAGCAATAGGGTGCAGTTTTC...TGGGAAGCCATATTCACACCTCACGCTCTGGACATGATTTAGGGAAGCAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAGTAAGCAGAGATCAATGGCTTCCCATACCCTaGGAATGTCTGAGTTACAGC +
Preference number: 5 (lower is better)
Translates to: HAQAGWTWTWGTLVSRDQWLPIP*ECLSYS
Trigger: GCTGTAACTCAGACATTCCAAGGGTATGGGAAGCCA...TTGATCTCTGCTTACTAATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACATTAAGAAGAGTGTTGACTaGGAATGGCGGAGGCTGATC +
Preference number: 5 (lower is better)
Translates to: HVMIRSCTGRLDLDMGHIKKSVD*EWRRLI
Trigger: GATCAGCCTCCGCCATTCCAAGTCAACACTCTTCTT...AATGTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGTCCCCCATGATGAATTaGGCACCTTCGATCACAGCC +
Preference number: 5 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVESPMMN*APSITA
Trigger: GGCTGTGATCGAAGGTGCCAAATTCATCATGGGGGA...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp TGTGGTTTCCAGCAGGTGCCTCTCTTCCAAATCACGGTCTGCTCAAGAAGAGTGAAATGGCTTGTGGATTaGGTACTCAAAGTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: CGFQQVPLFQITVCSRRVKWLVD*VLKVEG
Trigger: CCCTTCCACTTTGAGTACCAAATCCACAAGCCATTT...CACTCTTCTTGAGCAGACCGTGATTTGGAAGAGAGGCACCTGCTGGAAACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CAGCCATGTAATGATCAGGTCATGCACAGGCAGGTTGGACTTGGACATGGGGCACCTGACTCTCGGACTTaGAAAAGAAAGTTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: QPCNDQVMHRQVGLGHGAPDSRT*KRKFKN
Trigger: ATTCTTGAACTTTCTTTTCAAAGTCCGAGAGTCAGG...TGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGACCTGATCATTACATGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp ACCCACCCGGTCATGCAGCCACGTATCCACACACACCTGAAAAGGTATTATACCTCTAACAGCACTTTCTaGATATCAACGGAAGAAGGG +
Preference number: 5 (lower is better)
Translates to: THPVMQPRIHTHLKRYYTSNSTF*ISTEEG
Trigger: CCCTTCTTCCGTTGATATCAAGAAAGTGCTGTTAGA...GGTATAATACCTTTTCAGGTGTGTGTGGATACGTGGCTGCATGACCGGGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp AGAGTGTCATGCCAGGAATTAGGCAAATGCCTATTCCTGGAAAACTGCACCCTACTTCCTTTTTCTTCCTaGATGGGGCAGTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: RVSCQELGKCLFLENCTLLPFSS*MGQSLS
Trigger: GGATAAAGACTGCCCCATCAAGGAAGAAAAAGGAAG...TAGGGTGCAGTTTTCCAGGAATAGGCATTTGCCTAATTCCTGGCATGACACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGAAATGGCTTGTGGATTaGGTACTCAAAGTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVEKWLVD*VLKVEG
Trigger: CCCTTCCACTTTGAGTACCAAATCCACAAGCCATTT...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGTACCTATTTCGGTTTTaGTTCTTAGGAAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVEYLFRF*FLGSLA
Trigger: GGCCAAGCTTCCTAAGAACAAAAACCGAAATAGGTA...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR CAA 90 bp CTCGGGAGCTACAGCTGCCGTGTTTTTCATGTTAAAAAGCCACTTAATGTGGAGTCTAACAGCACTTTCTaGATATCAACGGAAGAAGGG +
Preference number: 5 (lower is better)
Translates to: LGSYSCRVFHVKKPLNVESNSTF*ISTEEG
Trigger: CCCTTCTTCCGTTGATATCAAGAAAGTGCTGTTAGA...CTCCACATTAAGTGGCTTTTTAACATGAAAAACACGGCAGCTGTAGCTCCCGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp CATTTCAAGCACATATTTTTCATCAGGACACAAGAAGACCTTACATGCATTCTATCATGCACAGGCAGGTaGGACTTGGACATGGGGCAC +
Preference number: 5 (lower is better)
Translates to: HFKHIFFIRTQEDLTCILSCTGR*DLDMGH
Trigger: GTGCCCCATGTCCAAGTCCAACCTGCCTGTGCATGA...TAGAATGCATGTAAGGTCTTCTTGTGTCCTGATGAAAAATATGTGCTTGAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp TATTGGCTTAAGGCATATAGCAGAGCAGCTCGCTACCTCTCTAACATAATGTGTTCTAACTTCAGTGTCTaGACTCATGCTTTCGATGCC +
Preference number: 5 (lower is better)
Translates to: YWLKAYSRAARYLSNIMCSNFSV*THAFDA
Trigger: GGCATCGAAAGCATGAGTCAAGACACTGAAGTTAGA...ACACATTATGTTAGAGAGGTAGCGAGCTGCTCTGCTATATGCCTTAAGCCAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS-3UTR CAA 90 bp AAATGCAAACCCATCATGAATATGGCAAGTTGGAAAACTGTACAGTCTGACAGTAGGCAAAGCGTCAATTaGGGAAGGAAATGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: KCKPIMNMASWKTVQSDSRQSVN*GRKWAE
Trigger: CTCAGCCCATTTCCTTCCCAAATTGACGCTTTGCCT...ACTGTCAGACTGTACAGTTTTCCAACTTGCCATATTCATGATGGGTTTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS-3UTR CAA 90 bp GTAAGTTTGTTAAGTTATCTGAGGGCCCTACACAGGCAAAGCGTCAATTTGGGAACAACACTGGTAAGTTaGTTAAGTTATCTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VSLLSYLRALHRQSVNLGTTLVS*LSYLRA
Trigger: GGCCCTCAGATAACTTAACAAACTTACCAGTGTTGT...TCCCAAATTGACGCTTTGCCTGTGTAGGGCCCTCAGATAACTTAACAAACTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371621.5
CDS GCA 72 bp GGCCAGGGCGGCTGCTGCGCCTCCTTCTCGGCCCACTaGGCCGTCTGCCGCTCTAGGCCGCGTCGCGCTCTT +
Preference number: 6 (lower is better)
Translates to: GQGGCCASFSAH*AVCRSRPRRAL
Trigger: AAGAGCGCGACGCGGCCTAGAGCGGCAGACGGCGCAGTGGGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS GCA 72 bp TCCTTTTCCATCTCCATGACGGGCCAGGGCGGCTGCTaGGCCTCCTTCTCGGCCCACTGCGCCGTCTGCCGC +
Preference number: 6 (lower is better)
Translates to: SFSISMTGQGGC*ASFSAHCAVCR
Trigger: GCGGCAGACGGCGCAGTGGGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCCCGTCATGGAGATGGAAAAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS GCA 72 bp AACTCCTTTTCCATCTCCATGACGGGCCAGGGCGGCTaGTGCGCCTCCTTCTCGGCCCACTGCGCCGTCTGC +
Preference number: 6 (lower is better)
Translates to: NSFSISMTGQGG*CASFSAHCAVC
Trigger: GCAGACGGCGCAGTGGGCCGAGAAGGAGGCGCAGCAGCCGCCCTGGCCCGTCATGGAGATGGAAAAGGAGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS GCA 72 bp CCCGACCCCTGCAGCTACCGCCGCCCTAGCCGCTGCTaGTTCTTCATGTCAACCGGCAGCCGGAACTACGCA +
Preference number: 6 (lower is better)
Translates to: PDPCSYRRPSRC*FFMSTGSRNYA
Trigger: TGCGTAGTTCCGGCTGCCGGTTGACATGAAGAAGCAGCAGCGGCTAGGGCGGCGGTAGCTGCAGGGGTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541713.5
CDS CCA 72 bp GGTCCTCGTCCTTCTCGGGCAGTGACGGCTCCCCTTTaGCTGGGGAGGCAGCCTGGGCACCTCGAAGACTTC +
Preference number: 6 (lower is better)
Translates to: GPRPSRAVTAPL*LGRQPGHLEDF
Trigger: GAAGTCTTCGAGGTGCCCAGGCTGCCTCCCCAGCCAAAGGGGAGCCGTCACTGCCCGAGAAGGACGAGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS TCA 72 bp GTAACTCAGTGCATGGTCCTCGTCCTTCTCGGGCAGTaGCGGCTCCCCTTTGGCTGGGGAGGCAGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: VTQCMVLVLLGQ*RLPFGWGGSLG
Trigger: GCCCAGGCTGCCTCCCCAGCCAAAGGGGAGCCGTCACTGCCCGAGAAGGACGAGGACCATGCACTGAGTTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS GCA 72 bp ATCCCCGACCCCTGCAGCTACCGCCGCCCTAGCCGCTaGTGCTTCTTCATGTCAACCGGCAGCCGGAACTAC +
Preference number: 6 (lower is better)
Translates to: IPDPCSYRRPSR*CFFMSTGSRNY
Trigger: GTAGTTCCGGCTGCCGGTTGACATGAAGAAGCAGCAGCGGCTAGGGCGGCGGTAGCTGCAGGGGTCGGGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541713.5
CDS GCA 72 bp ATCAGCCAGACAGAAGGTTCCAGACCTGCCGATGCCTaGACTGCAGTGCACCACAACGGGCCCGTGCTCCGG +
Preference number: 6 (lower is better)
Translates to: ISQTEGSRPADA*TAVHHNGPVLR
Trigger: CCGGAGCACGGGCCCGTTGTGGTGCACTGCAGTGCAGGCATCGGCAGGTCTGGAACCTTCTGTCTGGCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS CCA 72 bp ATCCTCCTGGGTCTCTTCCTTCACCCACTGGTGATTTaGGAAGAACTCCCTGCATTTCCCATTGTGTGGCTC +
Preference number: 6 (lower is better)
Translates to: ILLGLFLHPLVI*EELPAFPIVWL
Trigger: GAGCCACACAATGGGAAATGCAGGGAGTTCTTCCCAAATCACCAGTGGGTGAAGGAAGAGACCCAGGAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS GCA 72 bp CTTCCTTCACCCACTGGTGATTTGGGAAGAACTCCCTaGATTTCCCATTGTGTGGCTCCAGGATTCGTTTGG +
Preference number: 6 (lower is better)
Translates to: LPSPTGDLGRTP*ISHCVAPGFVW
Trigger: CCAAACGAATCCTGGAGCCACACAATGGGAAATGCAGGGAGTTCTTCCCAAATCACCAGTGGGTGAAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS CAA 90 bp TGGATCAGCCCCATCCGAAACTTCCTCATTTCTAACAGCACTTTCTaGATATCAACGGAAGAAGGGTCTTTCCTCTTGTCCATCAGCAAG +
Preference number: 6 (lower is better)
Translates to: WISPIRNFLISNSTF*ISTEEGSFLLSISK
Trigger: CTTGCTGATGGACAAGAGGAAAGACCCTTCTTCCGTTGATATCAAGAAAGTGCTGTTAGAAATGAGGAAGTTTCGGATGGGGCTGATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5
CDS CAA 72 bp CCCATCCGAAACTTCCTCATTTCTAACAGCACTTTCTaGATATCAACGGAAGAAGGGTCTTTCCTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: PIRNFLISNSTF*ISTEEGSFLLS
Trigger: GGACAAGAGGAAAGACCCTTCTTCCGTTGATATCAAGAAAGTGCTGTTAGAAATGAGGAAGTTTCGGATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371621.5
ENST00000541713.5