Pregenerated sensors for PTN (Homo sapiens)
Ensembl gene IDs: ENSG00000105894Ensembl transcript IDs: ENST00000348225.7, ENST00000393083.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACGCTGCAGCTCCTGCTTaGGCCGCTGCTGCTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FFFLDSAVASVDESISLHAAAPA*AAAALP Trigger: GGGGAGAGCAGCAGCGGCCCAAGCAGGAGCTGCAGC...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACTGCTTGGGCCGCTGCTaGTCTCCCCGCCTTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FFFLDSAVASVDESISLHCLGRC*SPRLLD Trigger: GTCCAGAAGGCGGGGAGAGCAGCAGCGGCCCAAGCA...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACGCTCGCTGCAGCTCCTaGTTGGGCCGCTGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFFLDSAVASVDESISLHARCSS*LGRCCS Trigger: AGAGCAGCAGCGGCCCAAGCAGGAGCTGCAGCGAGC...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCAGGTACCCGGCTCGCTaGAGCTCCTGCTTGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISRYPAR*SSCLGR Trigger: GCGGCCCAAGCAGGAGCTGCAGCGAGCCGGGTACCT...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCAGCTCCAGTCCGAGTaGCCTCCCGTGTGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLQLQSE*PPVCPA Trigger: GGCTGGGCACACGGGAGGGCACTCGGACTGGAGCTG...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCGAGGTTGCTACCGCTaGGTCCAGGTACCCGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLRGCYR*VQVPGS Trigger: CGAGCCGGGTACCTGGACTCAGCGGTAGCAACCTCG...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCTCCTGCTTGGGCCGCTaGTGCTCTCCCCGCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLSCLGR*CSPRLL Trigger: CAGAAGGCGGGGAGAGCAGCAGCGGCCCAAGCAGGA...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCGAGTGCCCTCCCGTGTaGCCAGCCCACAGTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLECPPV*PAHSLH Trigger: GTGGAGACTGTGGGCTGGGCACACGGGAGGGCACTC...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACGCTCTCCCCGCCTTCTaGACGGATGACTCACTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FFFLDSAVASVDESISLHALPAF*TDDSLV Trigger: GACCAGTGAGTCATCCGTCCAGAAGGCGGGGAGAGC...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACCCCCAGGCCTGGAACTaGTATTTGCACTCCGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFFLDSAVASVDESISLHPQAWN*YLHSAP Trigger: TGGCGCGGAGTGCAAATACCAGTTCCAGGCCTGGGG...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACCTCTGGCGCTCAGTCTaGCTTTGTTGCAAGGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FFFLDSAVASVDESISLHLWRSV*LCCKGR Trigger: TCGCCCCTTGCAACAAAGGCAGACTGAGCGCCAGAG...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCGCCCACAGTCTCCACTaGTGGGCACACACACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISAHSLH*WAHTHS Trigger: GGAGTGTGTGTGTGCCCACCAGTGGAGACTGTGGGC...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCGACTCAATTACGCCCTaGCAGGGAGGGAACGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLDSITP*QGGNGR Trigger: CCTTCCGTTCCCTCCCTGTCAGGGCGTAATTGAGTC...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCAGGGCTTGGAGATGGTaGCAGTCTTCTGGCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISRAWRW*QSSGIR Trigger: CCGAATGCCAGAAGACTGTCACCATCTCCAAGCCCT...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACTCAGTCTGCCTTTGTTaGAAGGGGCGAGGTTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FFFLDSAVASVDESISLHSVCLC*KGRGCY Trigger: GTAGCAACCTCGCCCCTTGCAACAAAGGCAGACTGA...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCTGGGCTTGGTCAGTTTaGCACAGGGCTTGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISWAWSV*HRAWRW Trigger: CCATCTCCAAGCCCTGTGGCAAACTGACCAAGCCCA...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCGCTCTGGGGCTCTCTTaGCGGGATTTTTGGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISALGLS*RDFWTG Trigger: TCCAGTCCAAAAATCCCGCCAAGAGAGCCCCAGAGC...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCGCCTTCTGGACGGATaGCTCACTGGTCTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISRLLDG*LTGLFL Trigger: AAGAAAGAGACCAGTGAGTCATCCGTCCAGAAGGCG...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACTGCCAAGAAGGCAGCTaGAAATTTTCGACGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFFLDSAVASVDESISLHCQEGS*KFSTLL Trigger: CAGCAGCGTCGAAAATTTGCAGCTGCCTTCTTGGCA...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACTCTTCATGGTTTGCTTaGACTCAGCTCCAGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FFFLDSAVASVDESISLHSSWFA*TQLQSE Trigger: CTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGA...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCACTCCGCGCCAAATTaGTTCTTCCAGTTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLHSAPN*FFQLQG Trigger: CCCCTGCAACTGGAAGAAGCAATTTGGCGCGGAGTG...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCGCGGGATTTTTGGACTaGAAGGCGGGGAACCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLAGFLD*KAGNLI Trigger: GATCAGGTTCCCCGCCTTCCAGTCCAAAAATCCCGC...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCTCTTGGCGGGATTTTTaGACTGGAAGGCGGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLSWRDF*TGRRGT Trigger: GGTTCCCCGCCTTCCAGTCCAAAAATCCCGCCAAGA...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCCCCTCTCTCCACTTTaGATTTTCCTCTGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISPLSPL*IFLCSG Trigger: CCCAGAGCAGAGGAAAATCCAAAGTGGAGAGAGGGG...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCTGGAAACGTCCTCTCTaGCGCTCAGTCTGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISWKRPL*RSVCLC Trigger: ACAAAGGCAGACTGAGCGCCAGAGAGGACGTTTCCA...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCACAGTCTCCACTGGTaGGCACACACACACTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLHSLHW*AHTHST Trigger: AGTGGAGTGTGTGTGTGCCCACCAGTGGAGACTGTG...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTGAGGTTTGGGCTTaGTCAGTTTGCCACAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISLEVWA*SVCHRA Trigger: AGCCCTGTGGCAAACTGACCAAGCCCAAACCTCAAG...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCACACACACACTCCACTaGCATTCTCCACAGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISTHTLH*HSPQSD Trigger: GTCTGACTGTGGAGAATGGCAGTGGAGTGTGTGTGT...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCTGGCATTCGGCATTGTaGAGGGCTCGCTTCAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLWHSAL*RARFRL Trigger: AAGTCTGAAGCGAGCCCTGCACAATGCCGAATGCCA...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCGATTTTCCTCTGCTCTaGGGCTCTCTTGGCGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLDFPLL*GSLGGI Trigger: AATCCCGCCAAGAGAGCCCCAGAGCAGAGGAAAATC...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCCTGCATTTTTGAGTTaGAAACGTCCTCTCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISPAFLS*KRPLWR Trigger: GCGCCAGAGAGGACGTTTCCAACTCAAAAATGCAGG...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCATTCTCCCCAGGCCTaGAACTGGTATTTGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLHSPQA*NWYLHS Trigger: GGAGTGCAAATACCAGTTCCAGGCCTGGGGAGAATG...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCTGCTGCTGGTACTGTTaGGCCTGCATTTTTGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISCCWYC*ACIFEL Trigger: CAACTCAAAAATGCAGGCTCAACAGTACCAGCAGCA...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCTGGGTCTTCATGGTTTaGTTGCACTCAGCTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLWVFMV*LHSAPV Trigger: GACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCA...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTGGAACTGGTATTTaGACTCCGCGCCAAATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLPGTGI*TPRQIA Trigger: AGCAATTTGGCGCGGAGTGCAAATACCAGTTCCAGG...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCATCTCTGGGTCTTCATaGTTTGCTTGCACTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISISGSS*FACTQL Trigger: GAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGAT...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCATGGTGACAGTCTTCTaGCATTCGGCATTGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLMVTVF*HSALCR Trigger: CCTGCACAATGCCGAATGCCAGAAGACTGTCACCAT...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCATTTTCCCTTCTCTTaGGGTTTGGGCTTGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLHFPFS*GLGLVS Trigger: ACTGACCAAGCCCAAACCTCAAGAGAAGGGAAAATG...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCTTTCTCTTTCTTCCCTaGTTCAGCAGTATCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISFLFLP*FSSIHS Trigger: GCTGTGGATACTGCTGAAGCAGGGAAGAAAGAGAAA...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACATTGCTTCTTCCAGTTaGAGGGGATCTTACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFFLDSAVASVDESISLHIASSS*RGSYIS Trigger: AGAGATGTAAGATCCCCTGCAACTGGAAGAAGCAAT...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCGGGATCTTACATCTCTaGGTCTTCATGGTTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISGILHL*VFMVCL Trigger: CAAGCAAACCATGAAGACCCAGAGATGTAAGATCCC...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCAGCAGTATCCACAGCTaGCAGTATGAAAATGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISSSIHS*QYENEC Trigger: GCATTCATTTTCATACTGGCAGCTGTGGATACTGCT...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCTTTATGTTCCACAGGTaGCATCTTTTAATCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFFFFLDSAVASVDESISFMFHR*HLLIQH Trigger: ATGCTGGATTAAAAGATGTCACCTGTGGAACATAAA...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCTTAGATTCTGCAGTTaGATCAGTAGACGAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLFLLLRFCSCISRRIHLLRFCS*ISRRIH Trigger: ATGGATTCGTCTACTGATGCAACTGCAGAATCTAAG...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS GCA 90 bp | GCAAGGGGCGAGGTTGCTACCGCTGAGTCCAGGTACCCGGCTCGCTaGAGCTCCTGCTTGGGCCGCTGCTGCTCTCCCCGCCTTCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARGEVATAESRYPAR*SSCLGRCCSPRLLD Trigger: GTCCAGAAGGCGGGGAGAGCAGCAGCGGCCCAAGCAGGAGCTGCAGCGAGCCGGGTACCTGGACTCAGCGGTAGCAACCTCGCCCCTTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS GCA 90 bp | ATCTCTGGGTCTTCATGGTTTGCTTGCACTCAGCTCCAGTCCGAGTaGCCTCCCGTGTGCCCAGCCCACAGTCTCCACTGGTGGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: ISGSSWFACTQLQSE*PPVCPAHSLHWWAH Trigger: GTGTGCCCACCAGTGGAGACTGTGGGCTGGGCACACGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS GCA 90 bp | TCCAGTTGCAGGGGATCTTACATCTCTGGGTCTTCATGGTTTGCTTaGACTCAGCTCCAGTCCGAGTGCCCTCCCGTGTGCCCAGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSCRGSYISGSSWFA*TQLQSECPPVCPAH Trigger: GTGGGCTGGGCACACGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGATGTAAGATCCCCTGCAACTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS GCA 90 bp | TTCTTCCAGTTGCAGGGGATCTTACATCTCTGGGTCTTCATGGTTTaGTTGCACTCAGCTCCAGTCCGAGTGCCCTCCCGTGTGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFQLQGILHLWVFMV*LHSAPVRVPSRVPS Trigger: GCTGGGCACACGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGATGTAAGATCCCCTGCAACTGGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS TCA 90 bp | CTTGAGGTTTGGGCTTGGTCAGTTTGCCACAGGGCTTGGAGATGGTaGCAGTCTTCTGGCATTCGGCATTGTGCAGGGCTCGCTTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LEVWAWSVCHRAWRW*QSSGIRHCAGLASD Trigger: GTCTGAAGCGAGCCCTGCACAATGCCGAATGCCAGAAGACTGTCACCATCTCCAAGCCCTGTGGCAAACTGACCAAGCCCAAACCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CCA 90 bp | GCTGGTACTGTTGAGCCTGCATTTTTGAGTTGGAAACGTCCTCTCTaGCGCTCAGTCTGCCTTTGTTGCAAGGGGCGAGGTTGCTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: AGTVEPAFLSWKRPL*RSVCLCCKGRGCYR Trigger: GCGGTAGCAACCTCGCCCCTTGCAACAAAGGCAGACTGAGCGCCAGAGAGGACGTTTCCAACTCAAAAATGCAGGCTCAACAGTACCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CCA 90 bp | GGCTTGGTCAGTTTGCCACAGGGCTTGGAGATGGTGACAGTCTTCTaGCATTCGGCATTGTGCAGGGCTCGCTTCAGACTTCCAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLVSLPQGLEMVTVF*HSALCRARFRLPVL Trigger: CAGAACTGGAAGTCTGAAGCGAGCCCTGCACAATGCCGAATGCCAGAAGACTGTCACCATCTCCAAGCCCTGTGGCAAACTGACCAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CCA 90 bp | ATTGCTTCTTCCAGTTGCAGGGGATCTTACATCTCTGGGTCTTCATaGTTTGCTTGCACTCAGCTCCAGTCCGAGTGCCCTCCCGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IASSSCRGSYISGSS*FACTQLQSECPPVC Trigger: GCACACGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGATGTAAGATCCCCTGCAACTGGAAGAAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CCA 90 bp | TCCGCGCCAAATTGCTTCTTCCAGTTGCAGGGGATCTTACATCTCTaGGTCTTCATGGTTTGCTTGCACTCAGCTCCAGTCCGAGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAPNCFFQLQGILHL*VFMVCLHSAPVRVP Trigger: GGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGATGTAAGATCCCCTGCAACTGGAAGAAGCAATTTGGCGCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CCA 90 bp | GTTCTGGTCTTCAGGGCTGTGTTCAGGTCACATTCTCCCCAGGCCTaGAACTGGTATTTGCACTCCGCGCCAAATTGCTTCTTCCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLVFRAVFRSHSPQA*NWYLHSAPNCFFQL Trigger: CAACTGGAAGAAGCAATTTGGCGCGGAGTGCAAATACCAGTTCCAGGCCTGGGGAGAATGTGACCTGAACACAGCCCTGAAGACCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS TCA 90 bp | GCCAAGAAGGCAGCTGCAAATTTTCGACGCTGCTGCTGGTACTGTTaGGCCTGCATTTTTGAGTTGGAAACGTCCTCTCTGGCGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AKKAAANFRRCCWYC*ACIFELETSSLALS Trigger: ACTGAGCGCCAGAGAGGACGTTTCCAACTCAAAAATGCAGGCTCAACAGTACCAGCAGCAGCGTCGAAAATTTGCAGCTGCCTTCTTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS TCA 90 bp | TGCAAATTTTCGACGCTGCTGCTGGTACTGTTGAGCCTGCATTTTTaGGTTGGAAACGTCCTCTCTGGCGCTCAGTCTGCCTTTGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CKFSTLLLVLLSLHF*VGNVLSGAQSAFVA Trigger: TGCAACAAAGGCAGACTGAGCGCCAGAGAGGACGTTTCCAACTCAAAAATGCAGGCTCAACAGTACCAGCAGCAGCGTCGAAAATTTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS GCA 90 bp | CTTCCCTGCTTCAGCAGTATCCACAGCTGCCAGTATGAAAATGAATaGCAAGAAGGCAGCTGCAAATTTTCGACGCTGCTGCTGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LPCFSSIHSCQYENE*QEGSCKFSTLLLVL Trigger: CAGTACCAGCAGCAGCGTCGAAAATTTGCAGCTGCCTTCTTGGCATTCATTTTCATACTGGCAGCTGTGGATACTGCTGAAGCAGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCTTGCAAGGGGCGAGGTaGCTACCGCTGAGTCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SFFFFLDSAVASVDESISLQGAR*LPLSPG Trigger: ACCTGGACTCAGCGGTAGCAACCTCGCCCCTTGCAA...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCGCGCTCAGTCTGCCTTaGTTGCAAGGGGCGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFFFFLDSAVASVDESISALSLP*LQGARL Trigger: CAACCTCGCCCCTTGCAACAAAGGCAGACTGAGCGC...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACGCACTCCGCGCCAAATaGCTTCTTCCAGTTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FFFLDSAVASVDESISLHALRAK*LLPVAG Trigger: CCCTGCAACTGGAAGAAGCAATTTGGCGCGGAGTGC...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTCTTGGCGGGATTTTaGGACTGGAAGGCGGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SFFFFLDSAVASVDESISLLAGF*DWKAGN Trigger: GTTCCCCGCCTTCCAGTCCAAAAATCCCGCCAAGAG...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACGCCTGGAACTGGTATTaGCACTCCGCGCCAAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: FFFLDSAVASVDESISLHAWNWY*HSAPNC Trigger: GCAATTTGGCGCGGAGTGCAAATACCAGTTCCAGGC...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACTTGGGCTTGGTCAGTTaGCCACAGGGCTTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FFFLDSAVASVDESISLHLGLVS*PQGLEM Trigger: CATCTCCAAGCCCTGTGGCAAACTGACCAAGCCCAA...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS GCA 90 bp | AGTATCCACAGCTGCCAGTATGAAAATGAATGCCAAGAAGGCAGCTaGAAATTTTCGACGCTGCTGCTGGTACTGTTGAGCCTGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: SIHSCQYENECQEGS*KFSTLLLVLLSLHF Trigger: AAAATGCAGGCTCAACAGTACCAGCAGCAGCGTCGAAAATTTGCAGCTGCCTTCTTGGCATTCATTTTCATACTGGCAGCTGTGGATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCTGCTCTGGGGCTCTCTaGGCGGGATTTTTGGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLFLLLRFCSCISRRIHLCSGAL*AGFLDW Trigger: CCAGTCCAAAAATCCCGCCAAGAGAGCCCCAGAGCA...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACGTCTTCATGGTTTGCTaGCACTCAGCTCCAGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FFFLDSAVASVDESISLHVFMVC*HSAPVR Trigger: TCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGAC...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACAGTTTGCCACAGGGCTaGGAGATGGTGACAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFFLDSAVASVDESISLHSLPQG*EMVTVF Trigger: GAAGACTGTCACCATCTCCAAGCCCTGTGGCAAACT...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCTCAGTCTGCCTTTGTaGCAAGGGGCGAGGTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: FLFLLLRFCSCISRRIHLLSLPL*QGARLL Trigger: TAGCAACCTCGCCCCTTGCAACAAAGGCAGACTGAG...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCGCCTGCATTTTTGAGTaGGAAACGTCCTCTCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SFFFFLDSAVASVDESISACIFE*ETSSLA Trigger: CGCCAGAGAGGACGTTTCCAACTCAAAAATGCAGGC...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTGGGTCTTCATGGTTaGCTTGCACTCAGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFFFFLDSAVASVDESISLGLHG*LALSSS Trigger: ACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAG...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCTTCTGGCATTCGGCATaGTGCAGGGCTCGCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLFLLLRFCSCISRRIHLFWHSA*CRARFR Trigger: TCTGAAGCGAGCCCTGCACAATGCCGAATGCCAGAA...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCTTCACGTTGAGCCTGCATTTTaGAGTTGGAAACGTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FFFLDSAVASVDESISLHVEPAF*SWKRPL Trigger: GAGAGGACGTTTCCAACTCAAAAATGCAGGCTCAAC...GTGAAGGGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCCCCATTTTCCCTTCTCTaGAGGTTTGGGCTTGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SFFFFLDSAVASVDESISPFSLL*RFGLGQ Trigger: CTGACCAAGCCCAAACCTCAAGAGAAGGGAAAATGG...GGAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCAACCTGATCCTGCCTTaGACTCAATTACGCCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FLFLLLRFCSCISRRIHLNLILP*TQLRPD Trigger: GTCAGGGCGTAATTGAGTCAAAGGCAGGATCAGGTT...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTTTCTTCTTCTTAGATTCTGCAGTTGCATCAGTAGACGAATCCATCTCAATTGCTTCTTCCAGTaGCAGGGGATCTTACATCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLFLLLRFCSCISRRIHLNCFFQ*QGILHL Trigger: GAGATGTAAGATCCCCTGCAACTGGAAGAAGCAATT...GAGATGGATTCGTCTACTGATGCAACTGCAGAATCTAAGAAGAAGAAAAAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393083.2 |
||
| CDS GCA 72 bp | GCTTGCACTCAGCTCCAGTCCGAGTGCCCTCCCGTGTaGCCAGCCCACAGTCTCCACTGGTGGGCACACACA | + |
|
Preference number: 6 (lower is better) Translates to: ACTQLQSECPPV*PAHSLHWWAHT Trigger: TGTGTGTGCCCACCAGTGGAGACTGTGGGCTGGGCACACGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS TCA 72 bp | GTCTGCCTTTGTTGCAAGGGGCGAGGTTGCTACCGCTaGGTCCAGGTACCCGGCTCGCTGCAGCTCCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VCLCCKGRGCYR*VQVPGSLQLLL Trigger: AAGCAGGAGCTGCAGCGAGCCGGGTACCTGGACTCAGCGGTAGCAACCTCGCCCCTTGCAACAAAGGCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CCA 72 bp | GCTCCTGCTTGGGCCGCTGCTGCTCTCCCCGCCTTCTaGACGGATGACTCACTGGTCTCTTTCTTCCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: APAWAAAALPAF*TDDSLVSFFPS Trigger: AGAGGGGAAGAAAGAGACCAGTGAGTCATCCGTCCAGAAGGCGGGGAGAGCAGCAGCGGCCCAAGCAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS GCA 72 bp | TCTTCATGGTTTGCTTGCACTCAGCTCCAGTCCGAGTaGCCTCCCGTGTGCCCAGCCCACAGTCTCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSWFACTQLQSE*PPVCPAHSLHW Trigger: CCAGTGGAGACTGTGGGCTGGGCACACGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CAA 90 bp | TTCCAGTTGCAGGGGATCTTACATCTCTGGGTCTTCATGGTTTGCTaGCACTCAGCTCCAGTCCGAGTGCCCTCCCGTGTGCCCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FQLQGILHLWVFMVC*HSAPVRVPSRVPSP Trigger: TGGGCTGGGCACACGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGATGTAAGATCCCCTGCAACTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CAA 72 bp | TTGGAAACGTCCTCTCTGGCGCTCAGTCTGCCTTTGTaGCAAGGGGCGAGGTTGCTACCGCTGAGTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LETSSLALSLPL*QGARLLPLSPG Trigger: ACCTGGACTCAGCGGTAGCAACCTCGCCCCTTGCAACAAAGGCAGACTGAGCGCCAGAGAGGACGTTTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CAA 90 bp | ATTTTTGAGTTGGAAACGTCCTCTCTGGCGCTCAGTCTGCCTTTGTaGCAAGGGGCGAGGTTGCTACCGCTGAGTCCAGGTACCCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IFELETSSLALSLPL*QGARLLPLSPGTRL Trigger: GAGCCGGGTACCTGGACTCAGCGGTAGCAACCTCGCCCCTTGCAACAAAGGCAGACTGAGCGCCAGAGAGGACGTTTCCAACTCAAAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CAA 90 bp | CTTCTTCCAGTTGCAGGGGATCTTACATCTCTGGGTCTTCATGGTTaGCTTGCACTCAGCTCCAGTCCGAGTGCCCTCCCGTGTGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPVAGDLTSLGLHG*LALSSSPSALPCAQ Trigger: CTGGGCACACGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGATGTAAGATCCCCTGCAACTGGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS TCA 72 bp | TGGGCTTGGTCAGTTTGCCACAGGGCTTGGAGATGGTaGCAGTCTTCTGGCATTCGGCATTGTGCAGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WAWSVCHRAWRW*QSSGIRHCAGL Trigger: GAGCCCTGCACAATGCCGAATGCCAGAAGACTGTCACCATCTCCAAGCCCTGTGGCAAACTGACCAAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS GCA 72 bp | AGGGGATCTTACATCTCTGGGTCTTCATGGTTTGCTTaGACTCAGCTCCAGTCCGAGTGCCCTCCCGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RGSYISGSSWFA*TQLQSECPPVC Trigger: GCACACGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGATGTAAGATCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CAA 72 bp | GTTGCAGGGGATCTTACATCTCTGGGTCTTCATGGTTaGCTTGCACTCAGCTCCAGTCCGAGTGCCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VAGDLTSLGLHG*LALSSSPSALP Trigger: CGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGATGTAAGATCCCCTGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS GCA 72 bp | TTGCAGGGGATCTTACATCTCTGGGTCTTCATGGTTTaGTTGCACTCAGCTCCAGTCCGAGTGCCCTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LQGILHLWVFMV*LHSAPVRVPSR Trigger: ACGGGAGGGCACTCGGACTGGAGCTGAGTGCAAGCAAACCATGAAGACCCAGAGATGTAAGATCCCCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CAA 72 bp | GGCTTGGAGATGGTGACAGTCTTCTGGCATTCGGCATaGTGCAGGGCTCGCTTCAGACTTCCAGTTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GLEMVTVFWHSA*CRARFRLPVLV Trigger: GACCAGAACTGGAAGTCTGAAGCGAGCCCTGCACAATGCCGAATGCCAGAAGACTGTCACCATCTCCAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CCA 72 bp | GTTGAGCCTGCATTTTTGAGTTGGAAACGTCCTCTCTaGCGCTCAGTCTGCCTTTGTTGCAAGGGGCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: VEPAFLSWKRPL*RSVCLCCKGRG Trigger: ACCTCGCCCCTTGCAACAAAGGCAGACTGAGCGCCAGAGAGGACGTTTCCAACTCAAAAATGCAGGCTCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CAA 72 bp | TTCGACGCTGCTGCTGGTACTGTTGAGCCTGCATTTTaGAGTTGGAAACGTCCTCTCTGGCGCTCAGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FDAAAGTVEPAF*SWKRPLWRSVC Trigger: GCAGACTGAGCGCCAGAGAGGACGTTTCCAACTCAAAAATGCAGGCTCAACAGTACCAGCAGCAGCGTCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS GCA 72 bp | TTGGAGATGGTGACAGTCTTCTGGCATTCGGCATTGTaGAGGGCTCGCTTCAGACTTCCAGTTCTGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LEMVTVFWHSAL*RARFRLPVLVF Trigger: GAAGACCAGAACTGGAAGTCTGAAGCGAGCCCTGCACAATGCCGAATGCCAGAAGACTGTCACCATCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS CAA 90 bp | CTGCAAATTTTCGACGCTGCTGCTGGTACTGTTGAGCCTGCATTTTaGAGTTGGAAACGTCCTCTCTGGCGCTCAGTCTGCCTTTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LQIFDAAAGTVEPAF*SWKRPLWRSVCLCC Trigger: GCAACAAAGGCAGACTGAGCGCCAGAGAGGACGTTTCCAACTCAAAAATGCAGGCTCAACAGTACCAGCAGCAGCGTCGAAAATTTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS TCA 72 bp | GCAGCTGCAAATTTTCGACGCTGCTGCTGGTACTGTTaGGCCTGCATTTTTGAGTTGGAAACGTCCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AAANFRRCCWYC*ACIFELETSSL Trigger: CAGAGAGGACGTTTCCAACTCAAAAATGCAGGCTCAACAGTACCAGCAGCAGCGTCGAAAATTTGCAGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS GCA 72 bp | GGTATTTGCACTCCGCGCCAAATTGCTTCTTCCAGTTaGAGGGGATCTTACATCTCTGGGTCTTCATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GICTPRQIASSS*RGSYISGSSWF Trigger: AAACCATGAAGACCCAGAGATGTAAGATCCCCTGCAACTGGAAGAAGCAATTTGGCGCGGAGTGCAAATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||
| CDS GCA 72 bp | TTTCTCTTTCTTCCCTGCTTCAGCAGTATCCACAGCTaGCAGTATGAAAATGAATGCCAAGAAGGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLFLPCFSSIHS*QYENECQEGSC Trigger: GCAGCTGCCTTCTTGGCATTCATTTTCATACTGGCAGCTGTGGATACTGCTGAAGCAGGGAAGAAAGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000348225.7 ENST00000393083.2 |
||